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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015072 ID=TCONS_00015072|Name=TCONS_00015072|organism=Clytia hemisphaerica|type=transcript|length=914bp
GTTCAGAAGGTTATCAAAGTGGGAACTGAACTCTTGGTCGATATCGTTTA
CGTCTGATTTGTTGTTGATGGTGTATAATTTGTCATCCTTTGAATTGTGG
AGTCGAATTTGTTTCCAATATGAACGtggtttgaaagttttaattttctc
tacATTGATGAAGTGATCCGTAGTTGCTTGGTTTTTGCACCTTTTTGATG
ATGAGCGAAAGTCCTTCCGTGCAAGAAGATATCGATTATATGAGATGTCT
GATGGTTCTCTGATAAAGTTACGGTCTCTCCAATCATTAAAgcacttttg
taaaattttccttttctttgtAAGTTCTGTGTTCCACCATGGTTTTGTCT
TAATGAAATGGAAGTCAGAGAGCTTAAGGTTATTGTAAGTTTCAATAGCA
CAGTTGTTTAATGTGTTATGTAGATGTGTTATCTCTTCGGTGATGTTTGA
GTTTTTGGAGCGGTATAGGTGCTTTGATACagtttctttgaaattattta
caaaaatgtcatttttccaTAGGTAGTTTGAAATGGCGTTTGGGTCATTT
ATTTCGTAATTGAAGCTTGGTGAGAAGTCAGTTTTCATGTTACAAGCTAT
GGGTAGGTGGTCGCTAGTATTGAGGTAGTGTTGTTGTAGTATGTTGATGT
TTGTTATTTTATCTAGGATGTTATTCGATACCAGTATATGATCGATATAA
GACTGGTTTGGTAGCGTAGCATGGTGATAAGTGTATGATGGGCCGGTACC
ATTTGTAATATCTATAGTGTTAAGTTAAATGTTCTGATGAATTCGTTTAG
GTGATCGGTTAGTGAATTTGGTTTTCCGATTCTTCCTGATGGGTGGGTTG
TTGGGCATGATTATTGACTATTGTAGTCACTTTAGATCACTAGTGTTGCA
TTGGTGGATTTCTA Run BLAST on NCBI protein sequence of TCONS_00015072-protein >TCONS_00015072-protein ID=TCONS_00015072-protein|Name=TCONS_00015072-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
MKTDFSPSFNYEINDPNAISNYLWKNDIFVNNFKETVSKHLYRSKNSNIT
EEITHLHNTLNNCAIETYNNLKLSDFHFIKTKPWWNTELTKKRKILQKCF
NDWRDRNFIREPSDISYNRYLLARKDFRSSSKRCKNQATTDHFINVEKIK
TFKPRSYWKQIRLHNSKDDKLYTINNKSDVNDIDQEFSSHFDNLLN Run BLAST on NCBI transcript from alignment at sc0000203:3796..4709 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015072 ID=TCONS_00015072|Name=TCONS_00015072|organism=Clytia hemisphaerica|type=transcript|length=914bp|location=Sequence derived from alignment at sc0000203:3796..4709 (Clytia hemisphaerica)
TAGAAATCCACCAATGCAACACTAGTGATCTAAAGTGACTACAATAGTCA
ATAATCATGCCCAACAACCCACCCATCAGGAAGAATCGGAAAACCAAATT
CACTAACCGATCACCTAAACGAATTCATCAGAACATTTAACTTAACACTA
TAGATATTACAAATGGTACCGGCCCATCATACACTTATCACCATGCTACG
CTACCAAACCAGTCTTATATCGATCATATACTGGTATCGAATAACATCCT
AGATAAAATAACAAACATCAACATACTACAACAACACTACCTCAATACTA
GCGACCACCTACCCATAGCTTGTAACATGAAAACTGACTTCTCACCAAGC
TTCAATTACGAAATAAATGACCCAAACGCCATTTCAAACTACCTAtggaa
aaatgacatttttgtaaataatttcaaagaaactGTATCAAAGCACCTAT
ACCGCTCCAAAAACTCAAACATCACCGAAGAGATAACACATCTACATAAC
ACATTAAACAACTGTGCTATTGAAACTTACAATAACCTTAAGCTCTCTGA
CTTCCATTTCATTAAGACAAAACCATGGTGGAACACAGAACTTacaaaga
aaaggaaaattttacaaaagtgcTTTAATGATTGGAGAGACCGTAACTTT
ATCAGAGAACCATCAGACATCTCATATAATCGATATCTTCTTGCACGGAA
GGACTTTCGCTCATCATCAAAAAGGTGCAAAAACCAAGCAACTACGGATC
ACTTCATCAATgtagagaaaattaaaactttcaaaccaCGTTCATATTGG
AAACAAATTCGACTCCACAATTCAAAGGATGACAAATTATACACCATCAA
CAACAAATCAGACGTAAACGATATCGACCAAGAGTTCAGTTCCCACTTTG
ATAACCTTCTGAAC Coding sequence (CDS) from alignment at sc0000203:3796..4709 >TCONS_00015072 ID=TCONS_00015072|Name=TCONS_00015072|organism=Clytia hemisphaerica|type=CDS|length=588bp|location=Sequence derived from alignment at sc0000203:3796..4709 (Clytia hemisphaerica)
ATGAAAACTGACTTCTCACCAAGCTTCAATTACGAAATAAATGACCCAAA
CGCCATTTCAAACTACCTAtggaaaaatgacatttttgtaaataatttca
aagaaactGTATCAAAGCACCTATACCGCTCCAAAAACTCAAACATCACC
GAAGAGATAACACATCTACATAACACATTAAACAACTGTGCTATTGAAAC
TTACAATAACCTTAAGCTCTCTGACTTCCATTTCATTAAGACAAAACCAT
GGTGGAACACAGAACTTacaaagaaaaggaaaattttacaaaagtgcTTT
AATGATTGGAGAGACCGTAACTTTATCAGAGAACCATCAGACATCTCATA
TAATCGATATCTTCTTGCACGGAAGGACTTTCGCTCATCATCAAAAAGGT
GCAAAAACCAAGCAACTACGGATCACTTCATCAATgtagagaaaattaaa
actttcaaaccaCGTTCATATTGGAAACAAATTCGACTCCACAATTCAAA
GGATGACAAATTATACACCATCAACAACAAATCAGACGTAAACGATATCG
ACCAAGAGTTCAGTTCCCACTTTGATAACCTTCTGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015072-exon-sc0000203-1491911889:3796..4709 | TCONS_00015072-exon-sc0000203-1491911889:3796..4709 | Clytia hemisphaerica | exon |
| TCONS_00015072-exon-sc0000203-1510915933:3796..4709 | TCONS_00015072-exon-sc0000203-1510915933:3796..4709 | Clytia hemisphaerica | exon |
| TCONS_00015072-exon-sc0000203-1575043694:3796..4709 | TCONS_00015072-exon-sc0000203-1575043694:3796..4709 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000203 | supercontig | sc0000203:3796..4709 . |
Blast
The following BLAST results are available for this feature:
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