TCONS_00015042 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015042
Unique NameTCONS_00015042
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1877

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015042 ID=TCONS_00015042|Name=TCONS_00015042|organism=Clytia hemisphaerica|type=transcript|length=1877bp
TTAtagtaaaaaaagataaactgaGATAGATGACGATGAAATAacgaaga
aaaataatttttagcaaTATTGTGAGAAATGTTGGATAGGGAAATGATAT
AATATGTtgataaaatggtgaaaaaataGAATAAGATTAGTGTATCCACA
AAAGTGAAAGGGAAAACATTCATAAATCTTATAAACTAGGAGAAATCGAT
ACAAACTCAAAATGAAGGCTGGTTATtcgaaaatgttttatttcatGGTG
GGCTTGATATTGGCTGTGGTTGCATTCACATATCTCCCTGTCATTTTCGG
TATAAGTTCCACTGTAAAAGTTGTCAACTTGAATGTTTATTCTGAGAAAT
TACGTGAAATGTTGAAACAATATCCAAAGAAAACCATTGAAATTGACAAG
GAGNGAAATTACGTGAAATGTTGAAACAATATCCAAAGAAAACCATTGAA
ATTGACAAGGAATCAGACAAAGGAATCACCTTTCGTATACATAATAACAA
TTCTCATGTACAGACTGTCAATGTAGAAAAGAACCCTACAAAAGGAGGTT
CTTCAGATAATACTAAAAACACTAGATCGAAGACACCTAAACCTActgtt
aaaaaagaaaaagactttgATGAGGAGAAGAAAGTGTTACCGACAGATAA
GCCAGTCACGCCAGCACCAACTCCAAAGAAGAATAATGTATTACCTGACT
GTTCAGATAAAGGTTCGAAATTAGTTGGACCACTTTTCATCGATCAATCA
ATTCCAAAAGACATGGAAGCTGTTGAAAAAGACCTAAGTGTTGATTTCGG
TGGAACTGTCGAAAAAGGTGGTAAATGGGCACCTACAACATGCAAACCCA
AACATAAGGTTGCTATCATCATTCCGTACCGCAAACGTGTTGTCCAATTG
AAATCCTTCCTCAAACACATGCACCCGTTCCTTCAAAAACAACTCTTGGA
TTATCGTATATTTATTATTGAACAGTTATACAAAGATCCATTCAATCGAG
CTGGGCTGTTCAACATTGGTTTTGTGGAAGCTTTGAAATTGGATAAAGAA
TTCGATTGTTTTGTCTTCACTGATGTGGACCTTCTACCAGAAGATGACAG
AAACTTTTACAATTGTCCAACGTCACCAAGACATATGTCGGTCGCTATCG
ATAAGTTCCATTATCAGTTACCGTACGCAACCATCTTTGGAGGGTGTGGA
TCTTTCCTTCGCGATGACTTTGAGAAGATCAATGGATTTTCTAATCTCTT
CTTTGGTTGGGGTGGGGAGGATGATGATCTCTATAAGAGAGTGCGTTCAT
ATGACATGGAAATCACGCGACCCTCCAAACAGATTGGACGTTACACAATG
TTAAAAGATGGCCATCATCAATCTTCTAAAGCTGACCCTAATATCATCTC
ACTCTTACAAACATCTGAACAAAGAATGGTGGTCGATGGATTGAATTCTT
TGAAATATGACGTCAAATCTGTGATCGAAGCACCTCTAGTGACTGTCGTT
CGTGTGGAATTATCTAGATCCATGTACAATCTTGATGTTTGAGTCTGTAA
TTCTGTTGGTCTATTTTGCAACTGCTGTCACTTCTATCCAataatcctca
taaaaaagtttccaaatggCGGACACTTAATTAGCGGACCTTCCAATTTG
CGGACAAACTTTTTTTgtacgaaatggccaaaaccctaCTTTTTcctctc
taattagcggacCCCTTAATAGTACCTTACACCAAAATTAGAGCACAGAA
TTGAAAAGTTTCTTAAAGGAGGACACCTCTATTAAGCGGACACGAACCCT
ATTCCCcaatggtgtccgctaattagaggttccactgtagcTCTGTTAAA
CGTTAGTAATTTAGAGGGAAAACCAGC
Run BLAST on NCBI

transcript from alignment at sc0000203:421126..429830+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015042 ID=TCONS_00015042|Name=TCONS_00015042|organism=Clytia hemisphaerica|type=transcript|length=8705bp|location=Sequence derived from alignment at sc0000203:421126..429830+ (Clytia hemisphaerica)
TTAtagtaaaaaaagataaactgaGATAGATGACGATGAAATAacgaaga aaaataatttttagcaaTATTGTGAGAAATGTTGGATAGGGAAATGATAT AATATGTtgataaaatggtgaaaaaataGAATAAGATTAGTGTATCCACA AAAGTGAAAGGGAAAACATTCATAAATCTTATAAACTAGGAGAAATCGAT ACAAACTCAAAATGAAGGCTGGTTATtcgaaaatgttttatttcatGGTG GGCTTGATATTGGCTGTGGTTGCATTCACATATCTCCCTGTCATTTTCGG TATAAGTTCCACTGTAAAAGTTGTCAACTTGAATGTTTATTCTGAGAAAT TACGTGAAATGTTGAAACAATATCCAAAGAAAACCATTGAAATTGACAAG GAGNGAAATTACGTGAAATGTTGAAACAATATCCAAAGAAAACCATTGAA ATTGACAAGGAATCAGACAAAGGAATCACCTTTCGTATACATAATAACAA TTCTCATGTACAGACTGTCAATGTAGAAAAGAACCCTACAAAAGGAGGTT CTTCAGATAATACTAAAAACACTAGATCGAAGACACCTAAACCTActgtt aaaaaagaaaaagactttgATGAGGAGAAGAAAGTGTTACCGACAGATAA GCCAGTCACGCCAGCACCAACTCCAAAGAAGAATAATGTATTACCTGACT GTTCAGATAAAGGTTCGAAATTAGGTGAGTTCTTTTGTCTATTATAATAT TTTCTTCTAGATCTTCTGATTTGAGAGGTAGATCTGCATATGACGTGTTT TTGTATACACTCAACTCTCATGTACAGAGCGTCAATATTGAAAAAACCCT ACGAAAGGTGGGGTCTATTtacttatctgattattttcagtagggACAAA ATTATTTAGAGTACAATTTTTCACTGGGGACCAAATTTTCTGGACATTAG GCTAAATGTTTCAGCGGAAAGGGGTGCCAATGGGTCTGTGAAAGGGGCTG TGGTATAACCCTTCTTCTTCGGTGTTCTGTTTTTTATGAAgcgaattttc aattttcaataatttcaatCATCACACTAgtgttgcttgataaatgatCA TTGGTTCGTAAATGATTTTACCATTAGCTTGATTATTGTCATTTGCTTTT TTAATGTTTCCTTGTTCAACCTACTCtgcttgaaaaaattaattcaatta AACCATACTCATACacgtttattttataagaacatccaaagtttttgaag cctttatagttcttaacttttttagttttaaaatgttcttattttcacta tttttggcgtatttttgtcaattttgctAAGAAATCGGGTTTTATAGAGT CCACaatgccttaaaatgtttttaacctgttcttaagatttttgcCATGA AGCCTTGTGCTCTTGTATACTAGTTTGTTCTGATAGAAAACCGTGTACTC TCTCTTAAATTCACCTTCCCTTATAAAAACTGTTGTTAAATGATAATAAT TATATAACATATACAGACAATAGTTTTCGaaggttttgatgtttttaaaa agtgcTGGATTGTAATACTCCTTCAACCCCGTAAAGCCCttcttaataaa aaaaagaaaataagttcTTCTGCCTCAGATTTTCATCTGAAAATATGAAC CTTTATAAGATATCGAGGGTTTGTAGAATTCTGTTTTGATAATTTCGTGA TACAGATACAGTCAACTCACTCTAATTCCAACCTCAATTATTCGGATCTT AACTGtgattcgaactaaaatattagtCCCCTAAGCTTGAAAGTGAtgta aattactctctgtaatccgaatctttctctaagtCGAAGACAATTTTTGG TCCCTTAAAGATTAAGTTATTAAGTattaagagagagagagagtaaaCTG TATATTTCTTTCGTTCAATTTTCAGTTGGACCACTTTTCATCGATCAATC AATTCCAAAAGACATGGAAGCTGTTGAAAAAGACCTAAGTGTTGATTTCG GTGGAACTGTCGAAAAAGGTGGTAAATGGGCACCTACAACATGCAAACCC AAACATAAGGTATAAATATCACGTAGTCTGCTATGTTTCTTTGATCTTGA CTTCTTACTTTTATTGTTGGTCATACACGAACGACtaacaaagaaaattc tttggCTAGAAATATGATAGGATCTGGAGATGAGATCATCAAACTTTTTG ATGGACTAAGTTATATCTGTCACCCATTACTGATCGGAGATTTTCTGAAA GTGGTACCCACGAAGAAGGTATCGCGGTGTTAAAGCCCAAGAAGAAGTTG GCCTAGCGCTTCCGATTTATTTACATTCAatattttactttgtttttttt ttgctagatTTCCCATATCaatagttatgaatttttcttttcgtttcttt ttttttaataataactATTTTACTTCCTGACTTTGGGCAGGGGGTGTCct ccaaaaatagaaaatgaaaaaaggaaataaaagaCGTTGGGATTTCCAGA AAAATACCACACTCTCATTTGTCGAGGAGGTCTGCTTCTTTGAAATCTTA AGTATTTTAAGGAGAAATGTCTACTTTTACCGACTTTCCCTGGAGTGGCG GAATGAGTTTGCTGTGAACTATTGTTAGATTCTACTTCAAACTTCATCAC CGACAATTGAAAGAGATTCCCTCGACATTGGGATAAACgctttttttttc tggaaaggcCCTAAGTTTCCTTCTTTATGTTTTCACTAATATGAGTTTCT GCCACTCATAAAATTATTTGTTGTTGAAAATGGTAATCGTCTTTTGCTGT TATGAACGAATAATAACTTCAAATAACCAGGCGTTACGATTTCCATGGCT AGCGATTTCCTTCGGAATGATCAACCAGATAAGCTGATATAAAACGTGGA TATCAGTTTTGATGCTTTTGATTTCCTGATTGTCATATCAAatgcaaatt ttatttttcttcccCGTTGCTAACTGATGCTAATTCTTCAATTACAATTT TCAATTACACCTATCCGCCGGCCTTATTGTTTATCGACTACCTACCGAAA CAAGCtagaaaaaaatagcaaaacgtCTAGCTTTAGTTTGTAACATTGGT TTATCACTTTCCAAATAAATTTAGTCACGAAAAATCCGTGCGTTAGATTC TCTCTAATGTTGCATCGCCTTCTTAAAATATTCGCGAACTTCAATTCCAC ATTCACCGTCTTTACTACACCCGGTatcaaataagttgaaaatgatTGTC AACAACAATATAAGTGCTTGCTCTACCAGAAGAAGTATTATAACAAAATT CACAACTTCATTTTTTGTAGTACTTTAAGTTtcacatagtgtcctcctgg gttggttccccccactaaagatcaaaatttttctccattctcccctcttt tatttcccccaccttatttcaaaaattttcggttcccccctcttttttga attccccagctatttgaagattttgcggttccccatatggttaacataaa aatgccttaaatcaagtttgaaattttggaaagcttgaaaaaatagcCTT GAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAA TAAATCTGGTCAGTAAAATCATCGTTGGGCGAATTCTTTATCTGGCtcga aaactgataaagaatTCAACCAGCGCCCACGGAAACCTTACCTGATCctg aaattgtattgaaaaattggtttatcccaaaagatttgctgattttattg cttaaacaggttttgcaacaagatcaccttgagatcagtgaagttccccc agtcaaaatctcctaaatttaTGGTTTCCCCCCTTCTTTATTttccccca gcaaatttcaaatttttcattttcccccatacttaaaaaaaagggccaaa atcagaatcccccccccctttataaaggggggggacaCTATGTTTCATgc gtacaatcatcagctacaaACAAAATGTTCTaacttgtttgaaaaaaatc aaatttttacaaGTCGTAGGGTtgtaaaaagttgtaaaattatgataaaa aaaaactcgatatcaatagagatttcattGCCTTACTATGCTGTACTATG CTATAGTAAAATGTAGTTGAAACACCAATGAGTCATTTTTCTTGCCAAGA AAGAAAATTGGGCGCACTTCGAAATAACAGTTGCACTGAATGGAAGCATC GCTATTTTTATCAAAGTCTCCTACAACATCAAGTGAAAAGATGAGACAAC TTGTTgttaatttggaaattttttgtcTCTCCCAAGCAAAtgaattgaaa tgaaataaattgGTGTTGCACGCGTCGAAATAGTGGTAAGTTGGTTGTTC TTCCTTTTTCCCCTTCTCCCTGTTGTTCCCACCATCTATAGGACACCCCC TACCATTGACCACATCTACCCTCTTATTTCTACTAGCCTAAAATTAGAGC TATACATTTGAATGCATTTGAAAAAGTTATGATTTTGGTCAATAAAAAAA ATGCCTTGTTTTTGTCTATGTTATGATTAAATGATAATTGACTTCGGAAT GATAGCTTCcaaaataggaataaaatatACAGTCACGATCACGATCACGA TCAAAGGAGATTTCTCAGCCTTCTCTGAACCCTGTGAACTCGAAAATAAA GACTAGAATGAACATTTATTTCAaaaggccttttcataaattacttcacc agcaacgcttacctcgttttcaaaatactgCTATGGCACGCGATGGTAAT TGATACCCAGAGGAATTCATATAAGAATTTTACTCTAGTTATAAAAGAAC CACTTGAAAACTCAGCGGACTTAATTCCCTTGGTAATGAATCCAAAACGA GGCAGTCTATGCACTCAAaataataatgaataatgaaaaggcttttttcc attaaaaatatctttcctgAAGAAATTCGATGTGATTGTGATTTAAGGAG GAGGTGTGGAAGTCAATTAGATATCAAATCCAGTCCATTTTATAGTTCAG TGCTTTTTATGTGTTATCCTCAACAGTCATCACTTAGTCCTAGTTTAGAC AGCCGACTTTCTTGCCCTGCCTATTCCAATTCGAAATTAAAATCAGTAGA AAGTTTTCATCATCAGCGTCTTTACTGGTCTCTAGGTTGCTATCATCATT CCGTACCGCAAACGTGTTGTCCAATTGAAATCCTTCCTCAAACACATGCA CCCGTTCCTTCAAAAACAACTCTTGGATTATCGTATATTTATTATTGAAC AGGTAACTTGACTTATGTATGAAAACTAATTTTAGCTTAGAGGTTTGATT TAACAGTTTAGTTACAGATTCGGTCCCAGGCGAATTCTGATCAGAAACTT TTACAAGATGTAATTTCGCAAAAGCTCTTAAATAAATAAACTCTTGCAAC AAATAGCTATTTTCTCTTCCTGAATGTTTGTTCTTAGCCAGATTTTGCAT GTTTTAACCAAATATTGACGTTTAACGTCGGTGATTTTGTTGGATGTTTA GTTTACTATTCAAGGTATTAAGCCGGAGCTTTGAATTCTGTGCATCTTAG TAATGTTTTTGGTTTGAGAAACAGCTCATACCATTGAATTACCTCCACTT CCACGCTTTTGTATTGTACAATTAGATCTTAGATCtataaattttagatt ttataagAAACAGTTTGAAAACAGAACTTTCAATGTCCTCTTTAAAGTTA TACAAAGATCCATTCAATCGAGCTGGGCTGTTCAACATTGGTTTTGTGGA AGCTTTGAAATTGGATAAAGAATTCGATTGTTTTGTCTTCACTGATGTGG ACCTTCTACCAGAAGATGACAGAAACTTTTACAATTGTCCAACGTCACCA AGACATATGTCGGTCGCTATCGATAAGTTCCATTATCAGTACGTACGCAT TTTTCTGTTATAAGCAAACGGATTACTAACCCAACTGGCacccaacgttg tttcaacgttcatctaacgttatatggacgttatgaacattagctGGGAA TGCTCGAGGCCTCAAATgacgtgatttttttttcattctctaATTTCACT AAATTTCTTTTAGACAATCTAACCATGACAGACGATATCCCTTGACCTAA TAAGAATAATTATGGTATAATGTCAGGGGTGGTTAagacaaattttacaa aattaattgAGCTAGATTGTtattgcttattaaaaaattgtGCATTAGTC ATTGTTGTAATATTTATCTATTCCGTTCAACATTGCTTCAGCTAATTGTG GTTTGAAGTTCACCTCTTGGGCCCCACTCCTCGCTGAAATTATTGGCTAA AATTCGTTCCTGCTGAGAAAATGTACCctgagattttatttatttggggA CATTACAATAAACTATCATCCCACTATGATAGacaattgaaattttgaga atATATGAATTTTAGAGTTCCATAGTACACTATGAAGAAGAACTTTCCCA TCACCATTGTCATTGGAAAGTATTCACTATTCAGGAATGTTTTGATTCGT TTAACCTAGAGCCTTGCTCGTTGAATTTTTCCGACTTCTCCCGATGATTC ATGTTATGTACTAGGAATCCAATGAACACAAAACTACCTTATCGATAGAA ATTTCGTCGGTGGAAAATTTCGCCGGCAAAAAGTATTTGTCGGTAAAATA TTTCGTCACTAAGcgatttttcgtcactttttaccGACGAAATTTCTACC GATTAAGGTATTAGATATTTTTCGTGGAGAGGCTCTTACGGTTCTTGACT TTATTTATTTACCCAAAGCTAGGTTACTAGGCACTTTcaaatcattaatt tttatgaaacttGTTGTTATTTAGGTTACCGTACGCAACCATCTTTGGAG GGTGTGGATCTTTCCTTCGCGATGACTTTGAGAAGATCAATGGATTTTCT AATCTCTTCTTTGGTTGGGGTGGGGAGGATGATGATCTCTATAAGAGGTT GgctaaattttttcatttattttatccGATATTTTTCATGTCACCAAATA CAAACCCTTATCGTCCAGCTACTTCCATCTGGGTAATGGGTTAACAACTT TTGAAACCATTTGGGGAAAAATTTGGTCacttttcttaaaatcttttcCT ATGTCtactttttttcccttttttcctatttttttttgTCCTTTTGGTAC TTATAACCTTTTTATGTACACGTTCTAGAGTGCGTTCATATGACATGGAA ATCACGCGACCCTCCAAACAGATTGGACGTTACACAATGTTAAAAGATGG CCATCATCAATCTTCTAAAGCTGACCCTAATATGTAAGGAAAATGGAATA AAACAAATCCCGCAGTTGAGTTCTGCactattttatgtttttttttactg cAATCGTGATTTGTTATGGAAATTTCACGCTTTTGTATTGGACAGTTTTC CGAATTctatgaaaagttaaaaaaaattgtggatTGCCCTTTTTCTCGGG ATTCAATTTCTCGGATGACACTCAAATTTTTTAACGAAAATTATAATTAT AGAATTATAGCACAATTCttaaggccggcgcaaatgaatccaacatttga tccaacattattgttggatcaaatgttgggttcatttgtgcaagtcataa aattgcaactttttaagaaaattgttggaaatcatgttagatgaagtttg atcgctatcaaacttttcatccaacattttttatgagattgacgtcacgt ttatgttggtttcaatgttggatgcatttgcgtaatcatgttggatgaaa atgtttgacgtttttgcgcaaatgacttttcatgcaacttttcgaatttt tccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNaacttttcgaatttttccacgtgacttttcgtccaacattttgtccaa caatgaattggaaatgttggattgaatgttggattcatttgcgccggcct ttaAAGAAGACGACTTTTTTCGTCttcactttcaattttattttctaaat atcttttgatctttttaatcTGATAATATTTCACTCTTGAATATATTTTC TTAAAGCACATAATCTTTCTCCAAttcgaaatctatcaaaagttattttt tttactcCGCTGCAAATACCTATTACCTATATTGAGACCGACTTTaatat catgtttttttttacttcacaGCATCTCACTCTTACAAACATCTGAACAA AGAATGGTGGTCGATGGATTGAATTCTTTGAAATATGACGTCAAATCTGT GATCGAAGCACCTCTAGTGACTGTCGTTCGTGTGGAATTATCTAGATCCA TGTACAATCTTGATGTTTGAGTCTGTAATTCTGTTGGTCTATTTTGCAAC TGCTGTCACTTCTATCCAataatcctcataaaaaagtttccaaatggCGG ACACTTAATTAGCGGACCTTCCAATTTGCGGACAAACTTTTTTTgtacga aatggccaaaaccctaCTTTTTcctctctaattagcggacCCCTTAATAG TACCTTACACCAAAATTAGAGCACAGAATTGAAAAGTTTCTTAAAGGAGG ACACCTCTATTAAGCGGACACGAACCCTATTCCCcaatggtgtccgctaa ttagaggttccactgtagcTCTGTTAAACGTTAGTAATTTAGAGGGAAAA CCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008417XLOC_008417Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015042-exon-sc0000203-1491911889:421126..421849TCONS_00015042-exon-sc0000203-1491911889:421126..421849Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1510915933:421126..421849TCONS_00015042-exon-sc0000203-1510915933:421126..421849Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1575043694:421126..421849TCONS_00015042-exon-sc0000203-1575043694:421126..421849Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1491911889:423051..423184TCONS_00015042-exon-sc0000203-1491911889:423051..423184Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1510915933:423051..423184TCONS_00015042-exon-sc0000203-1510915933:423051..423184Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1575043694:423051..423184TCONS_00015042-exon-sc0000203-1575043694:423051..423184Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1491911889:426261..426377TCONS_00015042-exon-sc0000203-1491911889:426261..426377Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1510915933:426261..426377TCONS_00015042-exon-sc0000203-1510915933:426261..426377Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1575043694:426261..426377TCONS_00015042-exon-sc0000203-1575043694:426261..426377Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1491911889:426823..427013TCONS_00015042-exon-sc0000203-1491911889:426823..427013Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1510915933:426823..427013TCONS_00015042-exon-sc0000203-1510915933:426823..427013Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1575043694:426823..427013TCONS_00015042-exon-sc0000203-1575043694:426823..427013Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1491911889:427950..428072TCONS_00015042-exon-sc0000203-1491911889:427950..428072Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1510915933:427950..428072TCONS_00015042-exon-sc0000203-1510915933:427950..428072Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1575043694:427950..428072TCONS_00015042-exon-sc0000203-1575043694:427950..428072Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1491911889:428304..428408TCONS_00015042-exon-sc0000203-1491911889:428304..428408Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1510915933:428304..428408TCONS_00015042-exon-sc0000203-1510915933:428304..428408Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1575043694:428304..428408TCONS_00015042-exon-sc0000203-1575043694:428304..428408Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1491911889:429348..429830TCONS_00015042-exon-sc0000203-1491911889:429348..429830Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1510915933:429348..429830TCONS_00015042-exon-sc0000203-1510915933:429348..429830Clytia hemisphaericaexon
TCONS_00015042-exon-sc0000203-1575043694:429348..429830TCONS_00015042-exon-sc0000203-1575043694:429348..429830Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000203supercontigsc0000203:421126..429830 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.8666 3.04134 1.41833 0.940311 7.67514 5.98749 8.21791 8.28002 7.90693 9.21009 5.30295 5.54205 4.6383 4.19039 3.58517 3.13305 5.22386 3.7251 3.32042 5.12435 3.05069 4.54042 3.56345 3.86452 5.19655 4.09188 1.77436 2.02531 2.71049 3.1039
Blast
BLAST of TCONS_00015042 vs. Swiss-Prot (Human)
Match: B4GT2 (Beta-1,4-galactosyltransferase 2 OS=Homo sapiens GN=B4GALT2 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.128e-76
Identity = 122/294 (41.50%), Postives = 178/294 (60.54%), Query Frame = 1
Query:  637 LPTDKPVTPAPTPKKNNVLPDCSDKGSKLVGPLFIDQSIPKDMEAVEKDLSVDFGGTVEKGGKWAPTTCKPKHKVAIIIPYRKRVVQLKSFLKHMHPFLQKQLLDYRIFIIEQLYKDPFNRAGLFNIGFVEALKLDKEFDCFVFTDVDLLPEDDRNFYNCPTSPRHMSVAIDKFHYQLPYATIFGGCGSFLRDDFEKINGFSNLFFGWGGEDDDLYKRVRSYDMEITRPSKQIGRYTMLKDGHHQSSKADPNIISLLQTSEQRMVVDGLNSLKYDVKSVIEAPLVTVVRVELSR 1518
            LP      P PT      LP C D    LVG L I+ + P  +E V+++        V  GG++ P  C P   VA+IIP+R R   L+ +L ++HP L++Q L Y +++I Q  +D FNRA L N+GF+EALK D  +DCF+F+DVDL+P DDRN Y C   PRH ++A+DKF ++LPYA  FGG     +  F +INGF N ++GWGGEDDD++ R+    M+I+RP  +IGRY M+K    + ++ +P   + +Q ++  M  DG+ S++Y V  V   PL T + V++ R
Sbjct:   79 LPEVPSALPGPTAP---TLPPCPDSPPGLVGRLLIEFTSPMPLERVQRE-----NPGVLMGGRYTPPDCTPAQTVAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGVYVINQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRIGRYRMIKHDRDKHNEPNPQRFTKIQNTKLTMKRDGIGSVRYQVLEVSRQPLFTNITVDIGR 364          
The following BLAST results are available for this feature:
BLAST of TCONS_00015042 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GT21.128e-7641.50Beta-1,4-galactosyltransferase 2 OS=Homo sapiens G... [more]
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