TCONS_00015020 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00015020
Unique Name	TCONS_00015020
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1396

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000203:32181..48254+
coding sequence from alignment at sc0000203:32181..48254+

transcript sequence

>TCONS_00015020 ID=TCONS_00015020|Name=TCONS_00015020|organism=Clytia hemisphaerica|type=transcript|length=1396bp
ATTCTCATTTTTGTAAAGGCTAACATTTTAAAGTTACCAGAATGCGGTAA
ATATGACGCTGAATTTTCAAAGATAACATATCATCAACGGTTATTGGGTG
CTATTCTTAAAACTTTAGGCTTTATCTCACTGCGAAAATGTTTAACGAAA
TGTATGTTACATCCAACCTGTCAATCAGTGAATTTCATGAGACAAAATGA
GACTTGTGAATTATTAGGTAATTCTGCACGAAGAAATTCGTCAGGAAATT
CTCTATTTTCACCAGCAAATGGATGGAACCATTTTGAAACGGATTATGAC
AAGAAAACGTTGGGTTCATGGTGCAGCCATGGCAATAACAACCCTTGTAA
TATGATCACAGAACGTTGTGAAGACAGATGCGTTGGCAATTATCAATGTG
TCAAGCATGGTGAATCTCTTCAATTGTACATCAAAGATATCCAAGGATCT
TCTACACACAGTTCTGGCAACTTCCCATCAAATgcttttgatggaaatga
taaTTCATTCTTTCTGTCTGGAAATACTCCATTCAGGCCTCATTGGTTTA
AAGCAACATTCAAAGgccgtgtttttatttattttgttgaagtcGTCAAC
AGATCAGCTAAGCAAGAACGCGGTAACAATGTGGATCTTAAAACTGTGCT
CTACACAGGACAAGCACAAACTAAGGAAACGTGGTTCGGAAACACAGGTG
TTTTGGGTACCCGTAAAACATTCACAGACTAAGGAAACGTGGTTCGGAAA
CACAGGTGTTTTGGGTACCCGTAAAACATTCACATGTTTAAAAGAAGCAG
ATGAAATACTTTTGGTACAGGAAGTCAACCCATCAGGAGACGGTTTCATG
AATATCGGGGAAGTCAAAATGTTTGGAAGAACCACCTAAAATCAGTCTGT
ACCATACTCATCTCTTCGCTAACGTCAATTTTGGTATAGACTCCATTTCG
TATTTGAGATATTATTAAATTCGTATGAATATTTTTAGCGTTCGAGCACC
TTCAATTTATACGCAGGCCCAGCGGAAAAACCGTTAAAGTGGGGAGggtc
aaaatgagataaaatttgcaaggaatttgagaaaaaaatctcatttgatC
AAAAATGGGGAGGCTGATGTCTCCCCAATTCTCCCCGCTTCCACCAGGCC
TGATACACCTATCTACTCTtaaggccagggcaaaccagtccaagatttca
tccaacatgattttcaaatgttggatgaaatgtttgatggaaaaacttgc
gttgGATGGAGCAAAAATCAAGGCCAGGGCAAACCGATCTAACATTTCAT
CCGacatgacttggaaaaaaatgaaaattcaaaaaaataaagaaaaaagt
accaccaaaccaatccaacacgaaaaattacacaattcaatGAGAG

Run BLAST on NCBI

protein sequence of TCONS_00015020-protein

>TCONS_00015020-protein ID=TCONS_00015020-protein|Name=TCONS_00015020-protein|organism=Clytia hemisphaerica|type=polypeptide|length=243bp
ILIFVKANILKLPECGKYDAEFSKITYHQRLLGAILKTLGFISLRKCLTK
CMLHPTCQSVNFMRQNETCELLGNSARRNSSGNSLFSPANGWNHFETDYD
KKTLGSWCSHGNNNPCNMITERCEDRCVGNYQCVKHGESLQLYIKDIQGS
STHSSGNFPSNAFDGNDNSFFLSGNTPFRPHWFKATFKGRVFIYFVEVVN
RSAKQERGNNVDLKTVLYTGQAQTKETWFGNTGVLGTRKTFTD

Run BLAST on NCBI

transcript from alignment at sc0000203:32181..48254+

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00015020 ID=TCONS_00015020|Name=TCONS_00015020|organism=Clytia hemisphaerica|type=transcript|length=16074bp|location=Sequence derived from alignment at sc0000203:32181..48254+ (Clytia hemisphaerica)
ATTCTCATTTTTGTAAAGGCTAACATTTTAAAGTTACCAGAATGCGGTAA
ATATGACGCTGAATTTTCAAAGATAACATATCATCAACGGTTATTGGGTG
CTATTCTTAAAACTTTAGGCTTTATCTCACTGCGAAAATGTTTAACGAAA
TGTATGTTACATCCAACCTGTCAATCAGTGAATTTCATGAGACAAAATGA
GACTTGTGAATTATTAGGTAATTCTGCACGAAGAAATTCGTCAGGAAATT
CTCTATTTTCACCAGCAAATGGATGGAACCATTTTGAAACGGATTATGAC
AAGAAAACGGTAagcttttgttgttctttttttaataaaaagtaaCGGTA
GGAACATCCCCTAAATCTTGAATGAACGCCATTAAACGAAAAAAATTGGG
CCGGTACTAATCCTTTCCGATAAAGTGTGTAACACCCAAATGGACAATAG
GTGGGACACACAATCGGGGACAAAAGGTCTGTAGACATTTCTAAATTCAG
CAAAAACTTCTTCTTGAAAACGCTCAACGTGAAAACTCATTGAACTTTCA
ATCTCAGACCAATAAAGGCCTGAAGACTTTGCAAGAATTCATTTCCTTCA
ATGTTGAGTGGATTCAGCTTCTGGACTTCATCCAATATATCTTATTAAtc
caataaaattaaaaacaacatAGGCTCTGGTAAAATGGGTTTTCAGAGCT
TATTTGGAAACTGTCCATACAGGCCGTTCTCACAGACCCATAGATTataa
agaagttaccaattaactttgttgcgagcgaagggagtgagaaaaaaatt
gcaagtaatttaaaattatctcagtaaaattggtcctgggcgcaatttcA
GGAgtataaagtatgatttttaagattggggcgtttaaaaaatctttttt
ggcgccccctgCTCTTCGgcaaaaattggccaaaattttttctccaattt
ctgTTCCAACTGAAAATAACCAAATAAAAGAATCaacactgcaaaatatt
tactatttttcccatccacactgaattttctgacttgaaaacaaaagaaa
taccccagccataaaaaagatGGAAATAttaatccccattgagttttagC
CAGTGTCTGAAAAATTCAactgggtttgtgagaaggccTGTTCATTAGAT
TTTTAGAACCTTTTGTCCAAGATTGCATTTACAGAGATTTGGCTAAAATA
TGCGAATAGAAAggacttttgaaaatttgtacatTTAAGAAACGTATCCC
TAATGaatacactttttcgaccgtagccgctgATTGCCGCTCGGGCATTT
TCTTgcccgctttatcccactaaactcgatccaatccttttttgacacat
ttttctattgtatgTAGCAGTGAAAAAAGGGCTTGGGCGGTTTTAGTGGG
AttaagcggacaaaaaaatgcccacgcATCAATTGGTggttacggtcgaa
aaggtgtatatttACTTTCTCGCACTGATaagttttactttctttttcct
tttctagTTGGGTTCATGGTGCAGTAATGGAAATAACAACCCTTGTAATG
TGATCACAGAACGTTGTGAAGACAGATGCGTTGGCAATCATCAATGTGTC
GCAGTCGGTAAGCTTTCTCAGAGAAAAATTCGGAGCAGCTACAGggccgg
cggaacaaccgtaaaagtggggagcTGAAGGCTCAGAATGAGATAACTTT
TCTAGGATTTTGAGAAATAAATCTCATTTGTTCAAAGTTGGGGAGCCTGA
AGTCTCTCCGCTTCCACCGGGCCTGATTTGACACTCGAATTTCTATACCC
AACTTAAACAAGAGGTCGTACAACTATTCTATAAAATAGTTAAGGTTGAA
gttttctctaattcgactttcaaggggaattgtattttcattgaataagg
gGAGCATTCGAATAGTGGAGAGAATAATCGAATTAGCGTTAACTGCCGGG
GGTACTAGCTTTGCGAGATGACAGGTATATCAGAGCCAAAGTTCGAAATT
CAACCCTTAgagattttttgacattttgccACCCATAGAGAGACTATTTC
CACAAAACttcagccaaaatttccaaattttagtccaaatttcaagaatt
aaTGAGCCTTAAAAGAGTCCAATTTCGAACTTcataattttggaaccctt
actCAAGTGTTTTTTAACGatatttgtacccctttgatgGGCTTTCGAGT
TTGAAAATAGGACCCGGTttgcacatacccggcacccattttgcctactC
TCGGTCATCAATTGTATGCGCACAGGCAAGTTCTCTAGGATATTAGGATC
CATTCCGAATGTTTTGAAACGAGCACTTCTCCCTCGTGTAATCTAATGAT
GACCTACTGTAAAATTTTGCTTaatcaaaattctttcaatCAAACCTTTC
TACAATTCGAACTTGCTTCCCCGGCACGGAGAAACCTTCCTAAagtactt
tctataattcgaatctctctgcaATTCTAACTGATAAGATTCCCCGttta
agttcgaattagcgagggTATAAACTGTATAATTTGAACTCAACTCTTTC
AGCACAATCTCTTCATGAACACATGAATCACTCATCAATTTCAACACTAT
ACGGTACATATTATGCATCTCTTGCTTTTGATGGCAACGAAGATACATGG
GCATGTACAAATAACATAAATACAGGTGGTGAACCAAATTGGATTAAAGC
TGTCTTTAAAAGCCGTGTCTTCATCAATTACGTCATCTTTGTGAACCGAC
AAGACACCGTTAATACGGTACACGAAAATCGTTGCGATAATGTTGATCTC
AAGACCATTTTGCATACAAACAATAATCAAAATCTTATAACAACTTTTGG
AAACACGGGAGATTTAGGTAATCGCACGACAATCTCTTGTATGCAATTTG
CAGATGAAATTATAGCAACTCAAAATCCTCCACACCAGACAATGAATCTT
GCTGAAATATGGATTCATGGCAGAATTATATAACATTCtcattttcgacc
gtagccgccaattgacgcgcgcaggcatttttttgtccgctttatcccac
tagaaccgtcccagtccttttttcggaTCTATANGGCATTTtatttgtcc
gctttatcccgctaaaaccgtcccagtccttttttcgaaTCTATAGACAA
TaaagaaatgtgtcaaaaaagtattggatcgagtttagtgggATGAAGCG
GACAAAGAAATAAACGCGCGGCATTTGGTACGGTCTTAAAGGTGTATTTT
CATCAACGAAAATAAACTCCATAATAACATTTGCTGCGACAAATTCATGG
CAACTTCTTTTCTTGAGACACTGGGTCTGGATAATTAGACTTACGACAag
atttattattattaaccATATTCGTGCTAAGCTAAGGGGTGGGCTTTTCC
TGTTCGGTGGTTAAACTGATGTTAaaagctcctgaaataataaagCTTTG
GACAGGAAATTTTCTacaaattcctaacttttatttagcttcaaaataag
ttaatttttgaaacctaaaaatttttacaccttgagcatgatgataTTTC
AGACAGTAAAGTGTCAGtaaaaattgacacatttccatgtacaaatttat
ttttcatgttaAATATATCGTTTATCCCTATTCGTGTCAGGGAGGGGGAG
GGCTTTTTCTGTTCAGTGGTGAAATTTATGTTAATAACTTctgaaaataa
taaagtttttgacattaagttttctaaatttaaatatAAATATGTATATG
CATGTAATATGTAAATgtaaacttttatttagcttcaaaaagaaataatt
tttgacacctaaatattttcacaccttgagcataaTGACATCTCTGACAG
TAACGTGTCATAGAAATTGACACATTTCCagttcaaatttgattttcatg
gaAATATATCGTtcaaaccgtaatttattgaatttaaactCAGGGAACTT
TTTTCGAAAGGTTTTGTTAGAATGCAataattatttataagaacaaagaa
aagtttcggtttttgctcattTTGGAAATGacgagtgacgtcatcaaata
aattataaattattatcattatttgCTCACGGgaaatttcaatgaaactg
GACATGGTAGCATGGAAGTATGTTTCCAGTTGAAATTTTATTATGCGCTT
TTCATGACAAAATCTAAACTAACACAATACAAGgatttcgaattagattt
ttgcGAAGCTTTTTACTTTGATCCCATcatcatggatttattatagagac
tctggataaacatcgaatgaaacggtggagagcgagctattgtctttcta
ttttttcagaaaacaatcaataTACAGGGTTTGTCCGCAAATGACAAccg
tcatggcggctcgaacccagctggcacacatcGTTgctttaacgtttatc
taacgttcacaacgtccatgtaacgttagatgaacgttgaaacaacgttg
tgtgccatctgggaaggactctgattttgaaaaatgattNACAGACAGAG
ACAGCAAGAAGAGAATTTACATCGTGAAACCCCAACCGCCGCCGCCACTC
GTCGTCGTTCGAGGAGAAACCGAAGAAAAACTCGTCGTACGAGAAGACAC
CGCAGGAGGAGagaaaacaataacaataatcCTGCACAACTTCGCCGCCA
TTTTGTACGCAGCGATGCGGCTCCCCCTATACTTTCGAGGCTAATCTACA
CCCTCCACCGTTTTCAAACCGTCAAAACATTGCCATTCCTGGAATTCCAC
AGCAGCAGTTAGATNGTTCaagttcaaagttgacatttttatttcagtcg
ttgaaaatacaacttaaaaatgtcatcaatgcttttcaaaaagattcagt
gatagagaatcaaaACATAAAGATCTGCCAATTATTTCCATTCCGTTAAA
GTAACATTACCAAAACTAATAGTTTAGTAAATGGAGTTATTCATAACTCA
GGTTANTTAATTCAACTCAGTCATTTACCCTCTCTGTTTCGGAGGATGAT
CCTGGGAGCCTTTCTATTTCTGACACTGGGGACTCAAATCATAGACTGTC
AAAAGGTAAAGTAAAAGTTTCAAACCCACAATGGTGGTTTCTTGCTTGGT
CGTTGTTTTTTGGTGCTATGATGGTGTTTCATGAACACTTAGCCCCCTTA
CTGATTAGATACCAGGAAAGGATTTGCANATAGAAAATACCTCAGTCTCT
AGTAACGCTTCTTTCGAACATCATCAGTCTTGGTTACTCAAAGCAGTCAT
gaagatatttatttttattaatttcacaATTCTAACCTTGTGCTTGGCTG
ATCCTTTGGGTTCGAGCAGTGACACCAGCTCTTCAAATTCATCATCTAGT
TCTTCTGATGAGGAACCACCACCATCTAAGAAGAAAGCAAGAACANTTTT
CACGACGTATCCCTTTCAATGTGTGGCTGGTTATGACGTCCAATTCAGAA
GGAAGTTGGCTGTAAACCCAACCGAAACCTTCTGGGACAGAATCGGCCTg
gatattttttcttcaactttgAGGCCTCAAGTTGGTAGCTCTTCCTCCAG
CCAAGCTGGTTCGTTTCCTGATGTGACTTGCTACAAATGTAAGAAAAAAG
GTCATTATGCAACTAGGTGTCCTAACCCTTCGTCCTTACAGGACCAAACT
ACTAGTACTTTCACGCAGTCTCGACCACCTAGACCTCCCATTTCTGGTGC
TAATGCACAAAATCCCTTTCAAGGAAGTGCCCATGATGCATCGACTGAGG
CATGCCCCTATTTTAACTCTAGCTTCTGCAGGAGAGGCGCCACGTGTCGT
TATGCCCATAAATGCTCCTTCTGTGGAAGGCCAGGTCACCCAGCACACAG
CTGCAGAGCATCCAGGCCCTCTGGATAGTGTACCAGTAGGATCGTTTCCC
TTACCTCCTTCTGCTATTTGCAGGATTAATTTACGAttgtttcttgtttt
tcttgagGGTCATCCTGACCTGTACATCGTTGATTTTCTTAAGTCTGGTT
TCACAGATGGTTTCCGTGTTGGttttattacaaaaatgacACCAGGAAGG
AAAAGACCACTTTCTTCGTCCAATGATGTTTCTGAGGACATTTCTACAGC
CATTCTCAAAGAGATGAACAGGGGACACACAAAAGGTCCCTTCACTatcc
ttttaaaaatttccatttttctcCTTTGGGTGGTGTGCCGAAGCCTGATG
GTTCAATCAGAGTTATCCTTGATCTCAGCAGCCCAAGAGGGTCATCAGTA
ATTGATGGTATCTCTAGGGAAgctttttctgtaaaatattCTAAGTTTGA
TGATGCGGTCGATTTAGCTGCTACACCTACAGGTTGTTTCATGGGAAAAA
GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
ACCagacaaaaagttaaaagattTGTTAGGTAAGTTACAAGGCTGGAATA
ACGCTTCTCAGACTTCAAAGCGAGAGTTGCTCTCGTTGATTGGTTCTTTG
CCTTTTGCAGCCAAGGTCATTAAGCCAGGTCGCACTTTTATGAGGCGGTT
GATTGACCTCTCCACATCTGTGACAGAGCTTAGTGACATAGTGGAAATTT
CCGAACCTGCTCTTGAAGACATCAAGTGGTGGAGTGATTTTGCTCCGAGA
TGGAACGGGACNCAGTACAGTACAATAAAGGTATATCTCTATGGAATTCA
GTTTTGCGTACTCCAACAAGGCGTCGAAGTTAGAATTGCTTCCATGCGAA
GACTCCACTATGTCTTTAGAGGGATAAGGCGCACTCAAGTGGCTAGAAAA
AGGACTCGAAATCCTGTCACACCTGCACACCTTCGACAAATGTTATCTTT
TATCTCTAGCAATCAACTTTCTGCCTACGACCAAGCACTTTGGAAATGTC
TAGTGCTTACATCAGCTTTTTTTGGTCTTCTTCGAGTTTCAGAGTATACC
TCAGCTAGTTCAAGGTCATTTGATCCATTAACAAACCTTTGTGTGTCAGA
TGTTTCCTTACAAGGGCNAGCTTCAGCACAAGGAACTCCTATTCATGTCT
TAGAGTTTGTTGCAGTTGCCATGGCTGTAATTACTTGGGCGGATAACCTG
GTTAATAAGCAGGTCACTATTTCTACAGATAATTTAGACNGCCTAGTGTA
CTTATCAGAATAAAAGCAAGCAAGACAGACCCTTTTCTTGTGGGAACCAG
AGTCACTCTGTGGGGAGGTTGTGCCCCCTCTGTCCTGTTAATAGCATATC
TTCTTTTTACTCTTTCCGGATAACACGTCCACCTGGACCATTCTTCGTTT
TGGAATCAGGCGAATACATTACTAGAAATCATGTCACcagatttttaaat
tcttcacTGCGTGATGTCAACATCAGCACACANATTTTGATGAAACTAGT
TCGAcacctttttcttttgattgCAAGGATGAACATCAATATTCTTTTGG
TACACCTGTCAGGCAAAGATAATGTTTTTGATGACTTACTTTCTCGTCTG
CAGGTTGGCCGGTTCTTGAGTCTAGTCGAGTCCGCCAGTCCAGAACCTTC
CAGGATCCCAGAGGAAGCATGGGAGATCTTAGACTTGCTCGAGACCGTTT
ACTAGCTGAAGGTATCTCTCGAAACTCTTTGCGCACATATCAATCAGGCT
TCAATCGCTTTCAAAGANGAGAAGCAACTGTTTTGTGTCGTACATACATC
TCAACAACACCACTCGAAGAACCTGGTCGAGAGAAATTGGATAAGTACGT
GAACTAAGGAGTGTTTGGAATAATAAAAATTAAGACTTTCAAGAATGGTT
ATTGCTTGACGACGTGAACAATAAAAATGGATACCTGGACACTAATTGGT
CAAATGAATTTGGTATACTTTATAGTTCTTAAAATCTAGTATTATTTTGA
TACCCAGGTTCTTAGTTTGGGGAGTTTGGGGGTTGGCTTCGCTACGCTAc
gcttctattgaaaattttgaatcttctTCATGCCAGTGATGATGTAATCA
ATAAGattatttccacccggtaaccaatccggttGAAATATTTCCACCCG
GTAATTAATCCGGTCGATATCatatgatattatgatatgagattatttcc
acccggtaaccaatccggtgAATCCATTTATGCGGTGTTATTTGAGAATT
CCACCCGGCAGCCAATCCGGTGAAATGATATGAGattatttccacccggt
aaccaatccggtgatatgatattatgatatgagattatttccacccggta
accaatccggtgatatgatattatgatatgagattatttccacccggtaa
ccaatccggtgatatgatattatgatatgagattatttccacccggtaac
caatccagtgatatgatattatgatatgagattatttccacccggtaacc
aatccggtgAATGTCATTGCTGATTCCTGGCATCTATAGTGTTATGATTT
TAGAAAAGCGTAAGCGGAGCCTTCCCCTttaattccccaaaaaataatta
tcttcaaattgaaattattcaCTTCTCAGTTCCTTCTCGATGCATCAatt
aattactgttatacatttgaaggtttctggggaatttgtaaatggtaact
gcatactgatacagtctgctaaacattaatatggtaaaatttgctcttca
tctttaatTCTCTCTACAGTGATTTGATTGACaaatgcgcgataaaattt
ctattattggtcctCAGAGGTTGATTATATTCTTTGAatactcaacctct
gatactcagggtacatcagacgagtaaaatcaaacaaaaaacttataatg
acacgaaattttaattgggaatatttttccaatatttctccgagaagagc
tgagattgactatattagacgtgagtctcatagctccactgtggtatgaa
aatcctttgatgGCACGTGGTGGCCAGATAAAAATATCTGGAGTCAATAA
TCAATTAAACAAGCTCATGTTGtgtgccatcctttgtttactttgtaaga
attaattaccgaaaggtatattaccgtctatcaagagttattgatttgat
tcttataaagtatatgcttataagaaaaataaatatgctcatattgcgtg
ccatcctttgtttactttgtaagaattaattaccgaaaggtatattaccg
tctatcaagagttattgatttgattcttataaagtatatgcttataagaa
aaataaatatgctcatattgcgtgccatcctttgtttactttgtaagaac
taattaccgaaaggtatattatcgtctatcaagagttattgatttgattc
ttataaagtatatgcttataagaaaaataaatatcctCATATTGTGCGAC
atcctttgtttattttgtaagaactaattaccgaaaagtatattattgtc
tatcaagagttattgatttgattcttataatgtatatgcttataagaaaa
ataaatatcctcatattgtgcgccatcctttgtttacttggtaagaacta
attaccgaaaggtatatcaccgtctgtCAAGAGTTTTtggtttgattctt
ataaagtatatgcttataagaaaataaagaaaaaatcaaaaatgtgaagc
taaagacacaaagatatatgacgtaatccaaagagaACCCGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACActaagatatatg
acgtaatccaaagaaaacccgcgaaaatcgtccgtggttatacgagcgtg
taatttgtaaattaaatttagtgagtttgtccactatatcgagtactttc
gttttctaattttttttccgatgacaccaacaccgccgccgcgaaaggct
atcgtaatactttcgctaggcgaaattaataagaacatccatcaACATTT
GATAAGGCATCTACGCTTGTCGCTCGCTGTGGACCGTGGTCCCAGGGGTG
GTGGGGAGGGGTTACTACCCTTGTCGATCGACGGGGATGTGCagctgaag
ttcgaaaaatgggacttgttttaaaaaaaaactgactatgaatgggactg
aaattccaaaattttctcaattttctcaACCCGGGGTTGTGGTTACTTAA
TATTTTTCGCGTAGTTTAGTAGTTTAGTTCTAAACCTTTGTATTCTTAAA
TGTTTTGAATGGGTACTAAAAaattaatgtttaaaaaaattgatttcaat
atCTACATTGAATGTGGATGAATTGGGTTGATGTtgacattaaaaaaata
taaatatagaataaactttatataagaacattagccTTCGATGTCTAAAA
aattgagaacaagttaagaacattttaatgctttGTGGAATCTACAATAC
CCGATTTCTAATGAAAATGGAGAGGAAATGCcatcaaaatgataaaaata
agaacatgttacgAACATCcaacgaaggcttcaaaaaatttggatgttct
tataaaaaaacgtgtatgaaaaACTCTATGTAGTcaccttttttttgaca
gtaTGATTTATTCTTCTTTCATGATGCTGAAAGGAGGAACGTTAATTCTA
CTTCTTTGGACAAATATTTCTTTGTCACATATTTTGAGATTGCCTGAATG
CAATAATTATGAcgcaaagttttcaaaaatatcatacCATCAACGCTTAA
TTGgagatattttgaaaactttacaCTTTATCTCACTGCGAAAATGTTTG
ACAAAATGTATGTGGCATCCGAGATGCCAATCAGTGAATTTCAAGAGACA
AAATGAAACTTGTGAGTTATTAGGTAATTCTTTACAAAGTAATTTAACAG
GGAATGTTTTGTCTGTACCACAAACTGGATGGAACCATTTTGAAACGGAC
TATGACGAAAAAACGGTAAGTCTATTTTAAAAACCAGTGATAAATTCGTA
ATTGAAGAAATTACTTATAAATAACGTTTCATtggccaaaattaattctc
aacgaatttaaaaaagttttttaattcgccaaaatgaaaaaaccaaaatt
cgccaaaaccataaatttttttaactttgcaaGAACTTTATTTTGCGAAG
cagcaatttttaaaaatatttttggtgaaaTAACAGACTAAATTGCTTTT
CATcctaaaaatgtttgtttttgctaccagtggataccccttaaaatcAC
ATACCCCTTTAAACTCACAAAGTTGGATGTCGGGCTCTCTTAACCACCAA
ACTTAATTCAATATtatataattcacttttttacaatctcttataaatgt
actttcataaaatacctaatttcaCGAATTTCAATTATCGCAAAGTGTcg
taaaattcgaagttattcaaaatttgatcACAAATCCCTTCGAAAGATCA
AGTTTTTTGGGCCTAGGGATTACACAATtaaatttaaggtcataaaacct
atacttatggtcgatatgaaaaattcattttcttcttaATGGTTAGATCA
ATTGAATCACGGTTCAGCACCTGAATGGCAATTTCacagtttcagtaagt
tgtgagcaagggaacaatgtttgtaggttttaTAAGGTGCAATAATGTAG
GTTTTAAAGAGTATTTTGACTTTAAGGTagagttttaaaaatatttagtt
gccaatgatctaattgtaacattagtaactttgcattgaatcactgttca
aaatcagttcaaaaagactattttacaaaaagttattcgagaaaaaacat
tttgtaggttttaaggggtaaaaaGCTAAAAGGGCGTTTTTTTCACTTCc
tcgtgaaaaactgaaaaatggtttctacaAAGGGAAAACATATGGGAAGA
AAACCATAGACagcgtactttcaacacaaaaagtttcagcctcaagttcc
acCTAAATTATCAGATAGAGAGTGCCTCTATTTTTGAAggtttaaggggt
atccactggtagttTGGAAATACACAGTAGGTACCCTAGAATTAGTGGTA
CATATCCTACACAACTGAGGCGAGAAAGACGAAGGCACCATCTATAgtca
ggcacgacggaagctttttatatctggtacggcgaatgaggaaatttaag
cgattttatagcgatttgaccgacgaagaggaaaacttcgggtatttttg
tgaaaatctggtacggcggccgccgtacctgccgtacccgttgcgtcgtg
cctgaTAGTAAAAAAACCCTGGAGGCGAGGGTGACTATGTGACAGGATAC
TTGAAAACTTCATAAAATACAatcaaatcttttcatctaGTTGGGTTCAT
GGTGCAGCCATGGCAATAACAACCCTTGTAATATGATCACAGAACGTTGT
GAAGACAGATGCGTTGGCAATTATCAATGTGTCAAGCATGGTGGTAAGAA
ACAAAGTATTTTCGAGAACCTTTTCATGCGTCTCCGGGGAGAGGGGTGGT
ACTAGGatttaaatgaatttcgaaaattttgtaaattttctgacGTTTTT
GCCATCCCTAGAGAGACTGTTTCCCTATAGTTTCActaaaagtttcaaat
tttagtccaaatttcaagaatttatgaccctttaaaggagtcaatttttg
ttttcgtaattttggaccccttacagagactcaatttgcttttcattggt
ttttgtacccctttgaggaaCTTTTGAGGTGTAAAAAAGGGACCTTATGg
ctccaattttgcctaagtagccCCAACCCCCGGGTGCGTCTCAACAGTTT
AGAATCACAACACTAAAAgcctaggcttctgctcatcctctagcgaaaaa
agtttcttatataggagatatatctatagaggtttgcGAATCAAACTACT
AAAAGCCTGCATCCAAAAAATGAGCAGAGCCCAAAAATCATGTAAATTAT
ACGATTAAATATCATCATAGCGATGCGCCGCAGAAATAAGTGATATTTTC
ATAGCGGAATTCTATTTAATCGAGTAGAAAATTTGGAGGAAACAATTTTG
Tttagggaactttttttggcaggagctaattttggcgggcagcaaatgtc
ctaaaattttttaattttggcgggaacttattttggcgaatagtgaattt
ttttaattttggcgggaactaattttggcgaatgacatcgtaaatctgtt
ctattttgcctcattttgagcaattttgatgaatttcaggggttatttag
gcaaggaaacaaaaaaatttgattttggcgggaactaattttggcgaatc
tcgtctaaattcgccaaatccgccaaaattagttcccttaaggtacataA
CTTTGCATCGAAGATAAATCCGTGTTTCACGAAACGGATGgctatttgat
aaatttttaattatGTTGTCTTAAACatctaattcaaattctttCAGAAT
CTCTTCAATTGTACATCAAAGATATCCAAGGATCTTCTACACACAGTTCT
GGCAACTTCCCATCAAATgcttttgatggaaatgataaTTCATTCTTTCT
GTCTGGAAATACTCCATTCAGGCCTCATTGGTTTAAAGCAACATTCAAAG
gccgtgtttttatttattttgttgaagtcGTCAACAGATCAGCTAAGCAA
GAACGCGGTAACAATGTGGATCTTAAAACTGTGCTCTACACAGGACAAGC
ACAAACTAAGGAAACGTGGTTCGGAAACACAGGTGTTTTGGGTACCCGTA
AAACATTCACATGTTTAAAAGAAGCAGATGAAATACTTTTGGTACAGGAA
GTCAACCCATCAGGAGACGGTTTCATGAATATCGGGGAGGTCAAAATGTT
TGGAAGAACCACCTAAAATCAGTCTGTACCATACTCATCTCTTCGCTAAC
GTCAATTTTGGTATAGACTCCATTTCGTATTTGAGATATTATTAAATTCG
TATGAATATTTTTAGCGTTCGAGCACCTTCAATTTATacacaggcccggc
ggaacaaccgttaaagtggggagggtcaaaatgagataaaatttgcaagc
aatttgagaaaaaaatctcatttgatCAAAAATGGGGAGGCTGATGTCTC
CCCAATTCTCCCCGCTTCCNTGTTGAAGTCGTCAACAGATCAGCTAAGCA
AGAACGCGGTAACAATGTGGATCTTAAAACTGTGCTCTACACAGGACAAG
CACAGACTAAGGAAACGTGGTTCGGAAACACAGGTGTTTTGGGTACCCGT
AAAACATTCACATGTTTAAAAGAAGCAGATGAAATACTTTTGGTACAGGA
AGTCAACCCATCAGGAGACGGTTTCATGAATATCGGGGAAGTCAAAATGT
TTGGAAGAACCACCTAAAATCAGTCTGTACCATACTCATCTCTTCGCTAA
CGTCAATTTTGGTATAGACTCCATTTCGTATTTGAGATATTATTAAATTC
GTATGAATATTTTTAGCGTTCGAGCACCTTCAATTTATACGCAGGCCCAG
CGGAAAAACCGTTAAAGTGGGGAGggtcaaaatgagataaaatttgcaag
gaatttgagaaaaaaatctcatttgatCAAAAATGGGGAGGCTGATGTCT
CCCCAATTCTCCCCGCTTCCACCAGGCCTGATACACCTATCTACTCTtaa
ggccagggcaaaccagtccaagatttcatccaacatgattttcaaatgtt
ggatgaaatgtttgatggaaaaacttgcgttgGATGGAGCAAAAATCAAG
GCCAGGGCAAACCGATCTAACATTTCATCCGacatgacttggaaaaaaat
gaaaattcaaaaaaataaagaaaaaagtaccaccaaaccaatccaacacg
aaaaattacacaattcaatGAGAG

Coding sequence (CDS) from alignment at sc0000203:32181..48254+

>TCONS_00015020 ID=TCONS_00015020|Name=TCONS_00015020|organism=Clytia hemisphaerica|type=CDS|length=2928bp|location=Sequence derived from alignment at sc0000203:32181..48254+ (Clytia hemisphaerica)
ATTCTCATTTTTGTAAAGGCTAACATTTTAAAGTTACCAGAATGCGGTAA
ATATGACGCTGAATTTTCAAAGATAACATATCATCAACGGTTATTGGGTG
CTATTCTTAAAACTTTAGGCTTTATCTCACTGCGAAAATGTTTAACGAAA
TGTATGTTACATCCAACCTGTCAATCAGTGAATTTCATGAGACAAAATGA
GACTTGTGAATTATTAGGTAATTCTGCACGAAGAAATTCGTCAGGAAATT
CTCTATTTTCACCAGCAAATGGATGGAACCATTTTGAAACGGATTATGAC
AAGAAAACGTTGGGTTCATGGTGCAGCCATGGCAATAACAACCCTTGTAA
TATGATCACAGAACGTTGTGAAGACAGATGCGTTGGCAATTATCAATGTG
TCAAGCATGGTGAATCTCTTCAATTGTACATCAAAGATATCCAAGGATCT
TCTACACACAGTTCTGGCAACTTCCCATCAAATgcttttgatggaaatga
taaTTCATTCTTTCTGTCTGGAAATACTCCATTCAGGCCTCATTGGTTTA
AAGCAACATTCAAAGgccgtgtttttatttattttgttgaagtcGTCAAC
AGATCAGCTAAGCAAGAACGCGGTAACAATGTGGATCTTAAAACTGTGCT
CTACACAGGACAAGCACAAACTAAGGAAACGTGGTTCGGAAACACAGGTG
TTTTGGGTACCCGTAAAACATTCACAGACTAAATTCTCATTTTTGTAAAG
GCTAACATTTTAAAGTTACCAGAATGCGGTAAATATGACGCTGAATTTTC
AAAGATAACATATCATCAACGGTTATTGGGTGCTATTCTTAAAACTTTAG
GCTTTATCTCACTGCGAAAATGTTTAACGAAATGTATGTTACATCCAACC
TGTCAATCAGTGAATTTCATGAGACAAAATGAGACTTGTGAATTATTAGG
TAATTCTGCACGAAGAAATTCGTCAGGAAATTCTCTATTTTCACCAGCAA
ATGGATGGAACCATTTTGAAACGGATTATGACAAGAAAACGTTGGGTTCA
TGGTGCAGCCATGGCAATAACAACCCTTGTAATATGATCACAGAACGTTG
TGAAGACAGATGCGTTGGCAATTATCAATGTGTCAAGCATGGTGAATCTC
TTCAATTGTACATCAAAGATATCCAAGGATCTTCTACACACAGTTCTGGC
AACTTCCCATCAAATgcttttgatggaaatgataaTTCATTCTTTCTGTC
TGGAAATACTCCATTCAGGCCTCATTGGTTTAAAGCAACATTCAAAGgcc
gtgtttttatttattttgttgaagtcGTCAACAGATCAGCTAAGCAAGAA
CGCGGTAACAATGTGGATCTTAAAACTGTGCTCTACACAGGACAAGCACA
AACTAAGGAAACGTGGTTCGGAAACACAGGTGTTTTGGGTACCCGTAAAA
CATTCACAGACTAAATTCTCATTTTTGTAAAGGCTAACATTTTAAAGTTA
CCAGAATGCGGTAAATATGACGCTGAATTTTCAAAGATAACATATCATCA
ACGGTTATTGGGTGCTATTCTTAAAACTTTAGGCTTTATCTCACTGCGAA
AATGTTTAACGAAATGTATGTTACATCCAACCTGTCAATCAGTGAATTTC
ATGAGACAAAATGAGACTTGTGAATTATTAGGTAATTCTGCACGAAGAAA
TTCGTCAGGAAATTCTCTATTTTCACCAGCAAATGGATGGAACCATTTTG
AAACGGATTATGACAAGAAAACGTTGGGTTCATGGTGCAGCCATGGCAAT
AACAACCCTTGTAATATGATCACAGAACGTTGTGAAGACAGATGCGTTGG
CAATTATCAATGTGTCAAGCATGGTGAATCTCTTCAATTGTACATCAAAG
ATATCCAAGGATCTTCTACACACAGTTCTGGCAACTTCCCATCAAATgct
tttgatggaaatgataaTTCATTCTTTCTGTCTGGAAATACTCCATTCAG
GCCTCATTGGTTTAAAGCAACATTCAAAGgccgtgtttttatttattttg
ttgaagtcGTCAACAGATCAGCTAAGCAAGAACGCGGTAACAATGTGGAT
CTTAAAACTGTGCTCTACACAGGACAAGCACAAACTAAGGAAACGTGGTT
CGGAAACACAGGTGTTTTGGGTACCCGTAAAACATTCACAGACTAAATTC
TCATTTTTGTAAAGGCTAACATTTTAAAGTTACCAGAATGCGGTAAATAT
GACGCTGAATTTTCAAAGATAACATATCATCAACGGTTATTGGGTGCTAT
TCTTAAAACTTTAGGCTTTATCTCACTGCGAAAATGTTTAACGAAATGTA
TGTTACATCCAACCTGTCAATCAGTGAATTTCATGAGACAAAATGAGACT
TGTGAATTATTAGGTAATTCTGCACGAAGAAATTCGTCAGGAAATTCTCT
ATTTTCACCAGCAAATGGATGGAACCATTTTGAAACGGATTATGACAAGA
AAACGTTGGGTTCATGGTGCAGCCATGGCAATAACAACCCTTGTAATATG
ATCACAGAACGTTGTGAAGACAGATGCGTTGGCAATTATCAATGTGTCAA
GCATGGTGAATCTCTTCAATTGTACATCAAAGATATCCAAGGATCTTCTA
CACACAGTTCTGGCAACTTCCCATCAAATgcttttgatggaaatgataaT
TCATTCTTTCTGTCTGGAAATACTCCATTCAGGCCTCATTGGTTTAAAGC
AACATTCAAAGgccgtgtttttatttattttgttgaagtcGTCAACAGAT
CAGCTAAGCAAGAACGCGGTAACAATGTGGATCTTAAAACTGTGCTCTAC
ACAGGACAAGCACAAACTAAGGAAACGTGGTTCGGAAACACAGGTGTTTT
GGGTACCCGTAAAACATTCACAGACTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_008408	XLOC_008408	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00015020-exon-sc0000203-1491911889:32181..32489	TCONS_00015020-exon-sc0000203-1491911889:32181..32489	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1510915933:32181..32489	TCONS_00015020-exon-sc0000203-1510915933:32181..32489	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1575043694:32181..32489	TCONS_00015020-exon-sc0000203-1575043694:32181..32489	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1491911889:45721..45823	TCONS_00015020-exon-sc0000203-1491911889:45721..45823	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1510915933:45721..45823	TCONS_00015020-exon-sc0000203-1510915933:45721..45823	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1575043694:45721..45823	TCONS_00015020-exon-sc0000203-1575043694:45721..45823	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1491911889:46828..47140	TCONS_00015020-exon-sc0000203-1491911889:46828..47140	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1510915933:46828..47140	TCONS_00015020-exon-sc0000203-1510915933:46828..47140	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1575043694:46828..47140	TCONS_00015020-exon-sc0000203-1575043694:46828..47140	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1491911889:47584..48254	TCONS_00015020-exon-sc0000203-1491911889:47584..48254	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1510915933:47584..48254	TCONS_00015020-exon-sc0000203-1510915933:47584..48254	Clytia hemisphaerica	exon
TCONS_00015020-exon-sc0000203-1575043694:47584..48254	TCONS_00015020-exon-sc0000203-1575043694:47584..48254	Clytia hemisphaerica	exon

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00015020-protein	TCONS_00015020-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000203	supercontig	sc0000203:32181..48254 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0903792	0.0390667	0	0.0917752	0.417144	0.225634	0.308772	0.397412	0.39343	0.183094	0.671153	0.598029	3.66993	3.22217	1.29674	0.904889	0.634014	0.470993	6.65927	6.56758	1.79034	1.82728	0.478476	1.22603	0.383463	0.268199	0.215951	0.143914	0.136863	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR008979	Galactose-bd-like
IPR003609	Pan_app

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00015020 vs. Swiss-Prot (Human)

BLAST of TCONS_00015020 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00015020 (transcript) - C. hemisphaerica