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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015001 ID=TCONS_00015001|Name=TCONS_00015001|organism=Clytia hemisphaerica|type=transcript|length=984bp
TGCTTAAAGAAATAgtgtttatttttctaattaTGGTTAATCACAAGATG
AATACACCCCCTGACTCTCATTAAGGAAAGTACAACGTTGAATTTGGAAA
CAATGTTTCAAAAGTCTTTCTTAAAACCGGAAACTTTAACATCCAGCTGA
GCTTTaacatttttgtcaacattTAAATATCTCAAGCAAAAGCATTTTAT
GTCATTGAATTTAATAAAAAGAAGCAATGACGCAATCTGGTGCCAATGTA
TTTTGTGGAATAAAACTTGTGTGGAGGCCACTTGGGGTAGCAAGTAAATT
CAAAATTCTTGTGCGCATCTTCCAATTTTGCTGCCATTGCGAGCGTTCCT
CGTTCGAAAATTCTTTAAAGATAGATAATTTTATTGAAACACCAATGAAT
ACTTGCTGTTACCTCTAATATGACTCTAATATAACTTTTGTTGTCTGAAA
ACTGTCTACAATTTAAGATTCTTttggatgaattttttttttcaatatca
actttttttctggaataatCGAGTTAGAAAACCTCGAGTTAACAATTTTC
GAGATGGGAGTTTTCGAGTTACTTAAATCAAAAGTATCGCACTCAACTCT
AACTCGATTttctttttcgcaaaaaaatcttttgagttAGCCACcgagaa
atattcgaattacagagagtacaTCCTCAGGTTATCctaagatgttctta
acgttTAGTCGATTTTTCACCCTGATGTTCTTGTAAGCACTAATTCTTAA
AAAgaagggacaagctggagtttttactagctcttatttgatttgtgtgt
tcgttaagatgtaataaaagaatcttattactttttctaaagaaNtagct
cttatttgatttgtgtggtcgttaagatgtaataaaagaatcttattact
ttttctaaagaacgtgtcATCCCTATCactgaagtatcttgtaaaaactc
caaggcatctcaaaaagaaaagtgtgtatttaca Run BLAST on NCBI transcript from alignment at sc0000201:312974..313957 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015001 ID=TCONS_00015001|Name=TCONS_00015001|organism=Clytia hemisphaerica|type=transcript|length=984bp|location=Sequence derived from alignment at sc0000201:312974..313957 (Clytia hemisphaerica)
tgtaaatacacacttttctttttgagatgccttggagtttttacaagata
cttcagtGATAGGGATgacacgttctttagaaaaagtaataagattcttt
tattacatcttaacgaccacacaaatcaaataagagctaNttctttagaa
aaagtaataagattcttttattacatcttaacgaacacacaaatcaaata
agagctagtaaaaactccagcttgtcccttcTTTTTAAGAATTAGTGCTT
ACAAGAACATCAGGGTGAAAAATCGACTAaacgttaagaacatcttagGA
TAACCTGAGGAtgtactctctgtaattcgaatatttctcgGTGGCTaact
caaaagatttttttgcgaaaaagaaAATCGAGTTAGAGTTGAGTGCGATA
CTTTTGATTTAAGTAACTCGAAAACTCCCATCTCGAAAATTGTTAACTCG
AGGTTTTCTAACTCGattattccagaaaaaaagttgatattgaaaaaaaa
aattcatccaaAAGAATCTTAAATTGTAGACAGTTTTCAGACAACAAAAG
TTATATTAGAGTCATATTAGAGGTAACAGCAAGTATTCATTGGTGTTTCA
ATAAAATTATCTATCTTTAAAGAATTTTCGAACGAGGAACGCTCGCAATG
GCAGCAAAATTGGAAGATGCGCACAAGAATTTTGAATTTACTTGCTACCC
CAAGTGGCCTCCACACAAGTTTTATTCCACAAAATACATTGGCACCAGAT
TGCGTCATTGCTTCTTTTTATTAAATTCAATGACATAAAATGCTTTTGCT
TGAGATATTTAaatgttgacaaaaatgttAAAGCTCAGCTGGATGTTAAA
GTTTCCGGTTTTAAGAAAGACTTTTGAAACATTGTTTCCAAATTCAACGT
TGTACTTTCCTTAATGAGAGTCAGGGGGTGTATTCATCTTGTGATTAACC
AtaattagaaaaataaacacTATTTCTTTAAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015001-exon-sc0000201-1491911889:312974..313957 | TCONS_00015001-exon-sc0000201-1491911889:312974..313957 | Clytia hemisphaerica | exon |
| TCONS_00015001-exon-sc0000201-1510915933:312974..313957 | TCONS_00015001-exon-sc0000201-1510915933:312974..313957 | Clytia hemisphaerica | exon |
| TCONS_00015001-exon-sc0000201-1575043694:312974..313957 | TCONS_00015001-exon-sc0000201-1575043694:312974..313957 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000201 | supercontig | sc0000201:312974..313957 . |
Blast
The following BLAST results are available for this feature:
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