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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014983 ID=TCONS_00014983|Name=TCONS_00014983|organism=Clytia hemisphaerica|type=transcript|length=1610bp
CAGCTTTCTATTTCAATCAATCGTAatcataaattgttttctcttcaata
gagaaataaaaaatatctttatgGTGATGGAGACGTGTACAAGTCCTTAT
CCAAGCCGTGACGAGCTGACTGATGGACAAAGTTTGACTCTCATCATCGC
CTTCACCATCCTGACACCGATGACGTTGCTACTGAACGGCTTTCTCATTT
ATGGATTGTACAAAACAAATCAGTACCGCAACGTGTTTTCTCGATTCATC
ATGGTTCTCTCGATGTCTGATTTTTGCATCGGTCTTTTTGTGCAGCCTGT
GGTCATTTATCTTTTCATTCCTGGTAGAGACAACTGTGCAGCATCTTGGT
ACCTCACTTTATCAGGATATGTGTTTTTGAATTTCTCTGGTCTGGTCATC
TTTATGGTGTCCATTGATCGTTTCTTTCGACTTCGAAGGTCCAATGGGTA
TACTCAAAAAGTGACATTGAACAAAGTGAATTTAGCGTTGGCCAGTGCAT
TCATCTTCTCAATACTAACCGCCATCGCAGCATATGTTTCCGCTATTTAC
AACTTCTTTTGCATTTTCAACATGTCCATCATTTCCATCAATTTCATTTC
GGCAACaggtattttaaatttttattttctggcatGGAAGAACGTTCGTA
AAAGAATCTCATCCATTCGCAACGTTTCGACTCGTTGTTCAACACACAGC
GCACAGTTCGATATTTCAACAAGTGACAAAAAGAGTGAAACTCACAGAGT
GAAAGGATCTTTGATGAGTGTGTTGAGCAAATCTAAACTGTCATTAGTAT
CACGAAGAACAAGACCACATTACGATGCAGCCATGACACGAACAGTAGCA
GCCATTTTGGTATGTTGTTGCGCCACATATCCACCCTATTTCATTGTGTC
GTTTTATCGTTCAGTGATGTTCACATTAGAAGGACATTGTGATCGTAAAT
CACACCCAACAAACATTTGGTTCTTTTGGTCATTCTTCCTCATGTTTTTG
AATTGCGTCATCAATGTCATTTTGTACTCTTGTCACAACAGACAGTTGAA
AGACTTGTTACGTTCGATGACGTCATGTTTGAGTGGTGGCGAAGGGAGTA
GCACTTCCGAAGAGACGAATGAACACAATCTCGCTGCAAACATTCTGAAA
AGCAAACNACGAAGGGAGTAGCACTTCCGAAAAGACGAATGAACACAGTC
TCGCTGCAAACATTCtgaaaagcaaacaaaaacCTAGCTTCGTCTAAAAT
AAGAGGTTTATTTTAAATATAACTGTATTTTTCAATGATATGTCTTTAAC
TCTTTTGGGACTGCCCTATTTTCGCTGTTTTTCATATACCTTTTTAAAAA
TGCTTTATCTTGGGATTGAGACGTTTTCATCATATCATTCACCCCTCAAA
AGAACCgcaagacttcaaaaatttagaaataaatttttttttttttttca
aaatggtggaaattcataatggcggccAAAGTagcgaaatttttcgaaaa
atgcgAAAAACTTTGATTCATTTTCCTATTTCCAGGGAATTGTGTAAGAT
TAGTGTATATTTTGTAGCTTACAAAGTTGTTCAAAATTAATTTggcaaga
agaagaagaa Run BLAST on NCBI protein sequence of TCONS_00014983-protein >TCONS_00014983-protein ID=TCONS_00014983-protein|Name=TCONS_00014983-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
SFLFQSIVIINCFLFNREIKNIFMVMETCTSPYPSRDELTDGQSLTLIIA
FTILTPMTLLLNGFLIYGLYKTNQYRNVFSRFIMVLSMSDFCIGLFVQPV
VIYLFIPGRDNCAASWYLTLSGYVFLNFSGLVIFMVSIDRFFRLRRSNGY
TQKVTLNKVNLALASAFIFSILTAIAAYVSAIYNFFCIFNMSIISINFIS
ATGILNFYFLAWKNVRKRISSIRNVSTRCSTHSAQFDISTSDKKSETHRV
KGSLMSVLSKSKLSLVSRRTRPHYDAAMTRTVAAILVCCCATYPPYFIVS
FYRSVMFTLEGHCDRKSHPTNIWFFWSFFLMFLNCVINVILYSCHNRQLK
DLLRSMTSCLSGGEGSSTSEETNEHNLAANILKSKXRRE Run BLAST on NCBI transcript from alignment at sc0000201:95883..97492 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014983 ID=TCONS_00014983|Name=TCONS_00014983|organism=Clytia hemisphaerica|type=transcript|length=1610bp|location=Sequence derived from alignment at sc0000201:95883..97492 (Clytia hemisphaerica)
ttcttcttcttcttgccAAATTAATTTTGAACAACTTTGTAAGCTACAAA
ATATACACTAATCTTACACAATTCCCTGGAAATAGGAAAATGAATCAAAG
TTTTTcgcatttttcgaaaaatttcgctACTTTggccgccattatgaatt
tccaccattttgaaaaaaaaaaaaaaatttatttctaaatttttgaagtc
ttgcGGTTCTTTTGAGGGGTGAATGATATGATGAAAACGTCTCAATCCCA
AGATAAAGCATTTTTAAAAAGGTATATGAAAAACAGCGAAAATAGGGCAG
TCCCAAAAGAGTTAAAGACATATCATTGAAAAATACAGTTATATTTAAAA
TAAACCTCTTATTTTAGACGAAGCTAGgtttttgtttgcttttcaGAATG
TTTGCAGCGAGACTGTGTTCATTCGTCTTTTCGGAAGTGCTACTCCCTTC
GTNGTTTGCTTTTCAGAATGTTTGCAGCGAGATTGTGTTCATTCGTCTCT
TCGGAAGTGCTACTCCCTTCGCCACCACTCAAACATGACGTCATCGAACG
TAACAAGTCTTTCAACTGTCTGTTGTGACAAGAGTACAAAATGACATTGA
TGACGCAATTCAAAAACATGAGGAAGAATGACCAAAAGAACCAAATGTTT
GTTGGGTGTGATTTACGATCACAATGTCCTTCTAATGTGAACATCACTGA
ACGATAAAACGACACAATGAAATAGGGTGGATATGTGGCGCAACAACATA
CCAAAATGGCTGCTACTGTTCGTGTCATGGCTGCATCGTAATGTGGTCTT
GTTCTTCGTGATACTAATGACAGTTTAGATTTGCTCAACACACTCATCAA
AGATCCTTTCACTCTGTGAGTTTCACTCTTTTTGTCACTTGTTGAAATAT
CGAACTGTGCGCTGTGTGTTGAACAACGAGTCGAAACGTTGCGAATGGAT
GAGATTCTTTTACGAACGTTCTTCCatgccagaaaataaaaatttaaaat
acctGTTGCCGAAATGAAATTGATGGAAATGATGGACATGTTGAAAATGC
AAAAGAAGTTGTAAATAGCGGAAACATATGCTGCGATGGCGGTTAGTATT
GAGAAGATGAATGCACTGGCCAACGCTAAATTCACTTTGTTCAATGTCAC
TTTTTGAGTATACCCATTGGACCTTCGAAGTCGAAAGAAACGATCAATGG
ACACCATAAAGATGACCAGACCAGAGAAATTCAAAAACACATATCCTGAT
AAAGTGAGGTACCAAGATGCTGCACAGTTGTCTCTACCAGGAATGAAAAG
ATAAATGACCACAGGCTGCACAAAAAGACCGATGCAAAAATCAGACATCG
AGAGAACCATGATGAATCGAGAAAACACGTTGCGGTACTGATTTGTTTTG
TACAATCCATAAATGAGAAAGCCGTTCAGTAGCAACGTCATCGGTGTCAG
GATGGTGAAGGCGATGATGAGAGTCAAACTTTGTCCATCAGTCAGCTCGT
CACGGCTTGGATAAGGACTTGTACACGTCTCCATCACcataaagatattt
tttatttctctattgaagagaaaacaatttatgatTACGATTGATTGAAA
TAGAAAGCTG Coding sequence (CDS) from alignment at sc0000201:95883..97492 >TCONS_00014983 ID=TCONS_00014983|Name=TCONS_00014983|organism=Clytia hemisphaerica|type=CDS|length=1170bp|location=Sequence derived from alignment at sc0000201:95883..97492 (Clytia hemisphaerica)
CTACTCCCTTCGTNGTTTGCTTTTCAGAATGTTTGCAGCGAGATTGTGTT
CATTCGTCTCTTCGGAAGTGCTACTCCCTTCGCCACCACTCAAACATGAC
GTCATCGAACGTAACAAGTCTTTCAACTGTCTGTTGTGACAAGAGTACAA
AATGACATTGATGACGCAATTCAAAAACATGAGGAAGAATGACCAAAAGA
ACCAAATGTTTGTTGGGTGTGATTTACGATCACAATGTCCTTCTAATGTG
AACATCACTGAACGATAAAACGACACAATGAAATAGGGTGGATATGTGGC
GCAACAACATACCAAAATGGCTGCTACTGTTCGTGTCATGGCTGCATCGT
AATGTGGTCTTGTTCTTCGTGATACTAATGACAGTTTAGATTTGCTCAAC
ACACTCATCAAAGATCCTTTCACTCTGTGAGTTTCACTCTTTTTGTCACT
TGTTGAAATATCGAACTGTGCGCTGTGTGTTGAACAACGAGTCGAAACGT
TGCGAATGGATGAGATTCTTTTACGAACGTTCTTCCatgccagaaaataa
aaatttaaaatacctGTTGCCGAAATGAAATTGATGGAAATGATGGACAT
GTTGAAAATGCAAAAGAAGTTGTAAATAGCGGAAACATATGCTGCGATGG
CGGTTAGTATTGAGAAGATGAATGCACTGGCCAACGCTAAATTCACTTTG
TTCAATGTCACTTTTTGAGTATACCCATTGGACCTTCGAAGTCGAAAGAA
ACGATCAATGGACACCATAAAGATGACCAGACCAGAGAAATTCAAAAACA
CATATCCTGATAAAGTGAGGTACCAAGATGCTGCACAGTTGTCTCTACCA
GGAATGAAAAGATAAATGACCACAGGCTGCACAAAAAGACCGATGCAAAA
ATCAGACATCGAGAGAACCATGATGAATCGAGAAAACACGTTGCGGTACT
GATTTGTTTTGTACAATCCATAAATGAGAAAGCCGTTCAGTAGCAACGTC
ATCGGTGTCAGGATGGTGAAGGCGATGATGAGAGTCAAACTTTGTCCATC
AGTCAGCTCGTCACGGCTTGGATAAGGACTTGTACACGTCTCCATCACca
taaagatattttttatttctctattgaagagaaaacaatttatgatTACG
ATTGATTGAAATAGAAAGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014983-exon-sc0000201-1491911889:95883..97492 | TCONS_00014983-exon-sc0000201-1491911889:95883..97492 | Clytia hemisphaerica | exon |
| TCONS_00014983-exon-sc0000201-1510915933:95883..97492 | TCONS_00014983-exon-sc0000201-1510915933:95883..97492 | Clytia hemisphaerica | exon |
| TCONS_00014983-exon-sc0000201-1575043694:95883..97492 | TCONS_00014983-exon-sc0000201-1575043694:95883..97492 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000201 | supercontig | sc0000201:95883..97492 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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