TCONS_00014976 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014976
Unique NameTCONS_00014976
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length333

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014976 ID=TCONS_00014976|Name=TCONS_00014976|organism=Clytia hemisphaerica|type=transcript|length=333bp
ATCACTTTTTGGCCATTTCCTCTTTAAGGTTAACTTTGCTCTCCAATCAA
CTTTCTTCTCTATTAGGGCCAGTTTTCTCAGGTCCGATCTGACATTCTGC
AACACAGTACTTTACTTCCCGGTCgtttaatatgattatttcatctatga
ataatcgaacaatatgcgaaattttcgactctgagtCGTCTTGTTTGGCT
TTCAGCCATCTTGGTCAGCTTCCAGCTGTCACTTCTGGCCACTCTGTTTG
AACCCTCTCTCAATAAATGGTTCCAAGCACATAACCTATTTGTGATAGTC
TGTGAAGCACCCGATAGACAACAGGAATGTCCA
Run BLAST on NCBI

transcript from alignment at sc0000201:389334..389960-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014976 ID=TCONS_00014976|Name=TCONS_00014976|organism=Clytia hemisphaerica|type=transcript|length=627bp|location=Sequence derived from alignment at sc0000201:389334..389960- (Clytia hemisphaerica)
ATCACTTTTTGGCCATTTCCTCTTTAAGGTTAACTTTGCTCTCCAATCAA
CTTTCTTCTCTATTAGGGCCAGTTTTCTCAGGTCCGATCTGACATTCTGC
AACACAGTACTTTACTTCCCGGTCGTTTAATATGATTATTTCATCTATGA
ATAATCGAACAATATGCGAAATTTTCGACTCTGAGTCGTCTTGTTTGGCT
TTCAGCCATCTTGGTCAGCTTCCAGCTGTCACTTCTGGCCACTCTGGTAC
GTTGTTTTCATGTTTTCTCTCTTTCTGTTTCTTTGTTTGCATTGTGCCTC
GCCTTGAATGAACTTTAGGTTAGCCTAGGGTAAGGACATGTTTGACTTAG
ACATATTTTTCAGATACTTGGACTTAATCTTTTTTCAAACTTTTGGACTT
AGATATTTTTCATGAATTCAGACTTATATATTTTTCAACTCAATTTAGAC
TCAACTTATACATAGACTTAGATTTCGTTCATACTTATTCAATTTTATTT
ATTTTCCAGTTATTTATAAACTCATTTGTATCTATTTCAGTTTGAACCCT
CTCTCAATAAATGGTTCCAAGCACATAACCTATTTGTGATAGTCTGTGAA
GCACCCGATAGACAACAGGAATGTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008371XLOC_008371Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014976-exon-sc0000201-1575043694:389715..389960TCONS_00014976-exon-sc0000201-1575043694:389715..389960Clytia hemisphaericaexon
TCONS_00014976-exon-sc0000201-1575043694:389334..389420TCONS_00014976-exon-sc0000201-1575043694:389334..389420Clytia hemisphaericaexon
TCONS_00014976-exon-sc0000201-1510915933:389715..389960TCONS_00014976-exon-sc0000201-1510915933:389715..389960Clytia hemisphaericaexon
TCONS_00014976-exon-sc0000201-1510915933:389334..389420TCONS_00014976-exon-sc0000201-1510915933:389334..389420Clytia hemisphaericaexon
TCONS_00014976-exon-sc0000201-1491911889:389715..389960TCONS_00014976-exon-sc0000201-1491911889:389715..389960Clytia hemisphaericaexon
TCONS_00014976-exon-sc0000201-1491911889:389334..389420TCONS_00014976-exon-sc0000201-1491911889:389334..389420Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:389334..389960 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.43053	0	1.94366	2.07907	2.31497	1.21955	0.367833	1.95812	0.723286	0.597271	1.15945	0.981238	0.570901	0	0.64984	1.22041	0	0.880562	0.304136	0.636513	1.65974	1.61912	0.656085	1.19295	0.307178	2.19319	2.74615	0.837361	0.952663	1.94123
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014976 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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