|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014952 ID=TCONS_00014952|Name=TCONS_00014952|organism=Clytia hemisphaerica|type=transcript|length=1504bp
AGGTAATGGGTTTTAATAGATAAAGAAGTTTTTCAAGCCTGTGAATATAT
CTTGGAATGGGTCCTAACCTAGCCTGGAGATACAAGCtatgattttttct
tttatatattgatggcgaaatgaatagcatggtttgggatgagagtttga
atttctcagatcctgaTGACAGTTGAAAACAcaatcaatcaaattttgtt
attctttcactggtcacactttcttaacgAAAGTTCCGAAattggtttta
attttagtaagTAAGGACAGCGTTAAATTCGAACTCCCTACTGTTATTTT
TTTGAGCAGGCGGAAAAATGCCTCACAGCTCTAACCCGTCCtatatcaga
tttaaaaaatacaggacgggttTTCTGTCTAGCCCGAACCGTAATACGAT
CAAAATTACTCGACTAGCCTGACAAAAAAGGACCTCTAGCGTCTAGGACA
GCGGAAAGTAAAAGTACCGTCATTAAGGGGTAAGATTCGACTTCCCTGAC
TCAGATTCCGCTGACTTCGGAATATTTCCATTATTTTCCTGGGACCCGAA
ATAGGACTAGAAAGGGTTCTTTTCTAAAGATACGGAAAATGTCGTGTTGA
GTAAGGAGATTATCAAACTTTCCAAGGCTCATTTTTCAGCTACCCAGAGT
CTTCTTCTTTTACCACTAAAAGGTTTGCAGTGGAATGTTACCCCAAACAA
CGTTAAAGGTGTAGTCAATTATAAAGATGCGATTACAAATTCTATTAAAT
ATTACAAGATTATTCAATGACAATTATACGTGATATATTTTAAATGTAGG
aatgttttttgtaaaaataactACATAGTTCCCAATGGATTTTTTCGTTG
AAAATCAGTGAGATTTTATAATGTCCGTCAATGTAtgaaaatttaaatga
aaataatataattaaGTATAGTtatcagaagaaaaattcaaaaaaaccaC
CCCTCCCCAATACAGCGTATCAAGAGTGAGGTGAATTAAGAAAGGGTTAA
TAACGTTAAAAAAACACCCTGACTTGGAATTTTGTGTTCCTTAACATTAT
CAACTAACTGCCATGAAAGAATTATCTCAGACTTGCTTCCATCAATTTTC
TCATGCAAGCTTCATTCTTCACAGGGTGCTTAGTGATAGTTTCCCTTCTA
TAATGATTACAAACTGCCATAGTGTAATCAAGTACAAATTCTGCTCCTTT
GGATGGCCTCACTCCAATATTTGGGacttttgcaacaaaaacataGAAGC
CAATATTGACATCTTCAAGtgggaaaacatttttccaTTCGAAATATGGT
TCAATACGCTCAGCAACATTTCTCGATAATATGATAGCCATCCCAGTAGC
AAACGGAGCGTAAATTGTTTGTCCCCAcagttttttgtcaatataCCATT
TAGATCTTTTGTCTCGAATTGGACCACCACGCATATGCATTAAACCAGCA
TATAAAGAAGTCTTGTGCTCAACAGCAAAAGTATcttgataaaaaagttt
gtaG Run BLAST on NCBI transcript from alignment at sc0000201:420085..421588+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014952 ID=TCONS_00014952|Name=TCONS_00014952|organism=Clytia hemisphaerica|type=transcript|length=1504bp|location=Sequence derived from alignment at sc0000201:420085..421588+ (Clytia hemisphaerica)
AGGTAATGGGTTTTAATAGATAAAGAAGTTTTTCAAGCCTGTGAATATAT
CTTGGAATGGGTCCTAACCTAGCCTGGAGATACAAGCtatgattttttct
tttatatattgatggcgaaatgaatagcatggtttgggatgagagtttga
atttctcagatcctgaTGACAGTTGAAAACAcaatcaatcaaattttgtt
attctttcactggtcacactttcttaacgAAAGTTCCGAAattggtttta
attttagtaagTAAGGACAGCGTTAAATTCGAACTCCCTACTGTTATTTT
TTTGAGCAGGCGGAAAAATGCCTCACAGCTCTAACCCGTCCtatatcaga
tttaaaaaatacaggacgggttTTCTGTCTAGCCCGAACCGTAATACGAT
CAAAATTACTCGACTAGCCTGACAAAAAAGGACCTCTAGCGTCTAGGACA
GCGGAAAGTAAAAGTACCGTCATTAAGGGGTAAGATTCGACTTCCCTGAC
TCAGATTCCGCTGACTTCGGAATATTTCCATTATTTTCCTGGGACCCGAA
ATAGGACTAGAAAGGGTTCTTTTCTAAAGATACGGAAAATGTCGTGTTGA
GTAAGGAGATTATCAAACTTTCCAAGGCTCATTTTTCAGCTACCCAGAGT
CTTCTTCTTTTACCACTAAAAGGTTTGCAGTGGAATGTTACCCCAAACAA
CGTTAAAGGTGTAGTCAATTATAAAGATGCGATTACAAATTCTATTAAAT
ATTACAAGATTATTCAATGACAATTATACGTGATATATTTTAAATGTAGG
aatgttttttgtaaaaataactACATAGTTCCCAATGGATTTTTTCGTTG
AAAATCAGTGAGATTTTATAATGTCCGTCAATGTAtgaaaatttaaatga
aaataatataattaaGTATAGTtatcagaagaaaaattcaaaaaaaccaC
CCCTCCCCAATACAGCGTATCAAGAGTGAGGTGAATTAAGAAAGGGTTAA
TAACGTTAAAAAAACACCCTGACTTGGAATTTTGTGTTCCTTAACATTAT
CAACTAACTGCCATGAAAGAATTATCTCAGACTTGCTTCCATCAATTTTC
TCATGCAAGCTTCATTCTTCACAGGGTGCTTAGTGATAGTTTCCCTTCTA
TAATGATTACAAACTGCCATAGTGTAATCAAGTACAAATTCTGCTCCTTT
GGATGGCCTCACTCCAATATTTGGGacttttgcaacaaaaacataGAAGC
CAATATTGACATCTTCAAGtgggaaaacatttttccaTTCGAAATATGGT
TCAATACGCTCAGCAACATTTCTCGATAATATGATAGCCATCCCAGTAGC
AAACGGAGCGTAAATTGTTTGTCCCCAcagttttttgtcaatataCCATT
TAGATCTTTTGTCTCGAATTGGACCACCACGCATATGCATTAAACCAGCA
TATAAAGAAGTCTTGTGCTCAACAGCAAAAGTATcttgataaaaaagttt
gtaG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014952-exon-sc0000201-1491911889:420085..421588 | TCONS_00014952-exon-sc0000201-1491911889:420085..421588 | Clytia hemisphaerica | exon |
| TCONS_00014952-exon-sc0000201-1510915933:420085..421588 | TCONS_00014952-exon-sc0000201-1510915933:420085..421588 | Clytia hemisphaerica | exon |
| TCONS_00014952-exon-sc0000201-1575043694:420085..421588 | TCONS_00014952-exon-sc0000201-1575043694:420085..421588 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000201 | supercontig | sc0000201:420085..421588 + |
Blast
The following BLAST results are available for this feature:
|
