TCONS_00014854 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014854
Unique NameTCONS_00014854
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4517

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014854 ID=TCONS_00014854|Name=TCONS_00014854|organism=Clytia hemisphaerica|type=transcript|length=4517bp
gtaaaagaaaaaaagatcgaTGAATAGAAGTTGATGAGTTATTTAACGAG
TATCTCAGGATTTGGAATAAAAATCATTTATTAATGCAGCTTGATTGAGA
AAggacatgaaaacaaaagtgtagtttttttttgaatagtAGTTATTCAT
ATTTGAGGGATTAGGGATTCAATTGATAACAGTCGCAGTTGCGAAGaTCC
ACCAGCGGTGCGAATCAAGAAATCTCGATCATTCGAACTCGATAGAAAAG
CGGAAGTCATGATCAACAAGGATCAAACCTTCGAATCCAAATATGAACTC
CTGGAGGAGCTTGGAAAGGGTATGTTCGGCACCGTCAAAAAATGTCAGTG
TACAGACACCGGCGTCGAATATGCGGCCAAAGTGGTCCGAAAGACCacga
aaaacaaagaagaagttGTGCGTGAAGTATCCACTATGAACCTACTGCAA
CATAAATCCATTGCTCAAATCCACGATGCGTTCGAAAGCAAAAGACAGAT
GGTTATTGTCATGGAATTGATTCGCGGAAAAGAATTGTTCGAAAAAGTTT
GTCAGGAGGATACTTTACTGACTGAGAAACAATGTGTTTATTATTTACGG
CAAATTTTATCGGGCGTGGAATACATGCATAAAAAGAAGATTGTACATCT
AGATCTGAAGCCGGAGAACATTCTGTGCATCGATTCACCACAAGGTTATG
ATGAAATCAAACTGATCGATTTCGGTTTAGCGAGAGATTTGTCATCCACC
AAACAGTTATCCTGTATTTGCGGGACTCCTGAATTCGTTGCTCCCGAAGT
CATcaatttcgatccaatcagcgTCCAATCAGACATGTGGTCATTAGGAG
TCATAACGTACGTCTTATTAAGTGGGATCTCTCCTTTCCTTGGTGATGAT
GATGGTGAAACATTGCAGAATGTCACTTTCGGTGAATTCGACTTTGAGGA
TGAAGATGGTGCTTTTGAACACGTTTCTGAAATAGCTAAAGAATTCATTT
CAGATCTACTCTGTCTGAATCCAAGGGACCGTTTATCTGTGGGAGACTGT
TTGGAACATTCCTGGTTAAACACACAAACAAACGAGGAAGAATTAGACAC
CACCAATCTAAAGAAATTCATCGCAAGGCGACGGTGGCTGCGTACAATAC
ACGCCATCAAGGCTGTCGGTCGTTTCAATCAAGTCGCCAATTCGCTTGGC
GGGAAAGGAAAGAAAGGCGGTGACTCCCTAGCTAAAACCATGCTTGCCGC
CCTCAATGCCGCCAATAAAGAAAATTCCATTGACAAGGAAGATGAAACTA
AAGTTGAAGAAATAATCAGCCAATCAGCAGACGTGGATTCAAAATCTAAC
CAATCAGAGAGTGCTCCCGAAACCGTAATCGAATCAAATGGCTTCCACAA
GGACAAACCTGCCCAATCAGAGATTGTTACTAATGGCAACACAGAGTCCA
CTTTTGGAGACGATGATGAAATGTCTGATATGTTAAAGAAGCGAGCGGAA
AGGAGGCGGAGAAAACgttttgaagatgaagaagaggaTTACGACGTCTT
TGCAAACGTTTCCAATAGAGTAACGGAAGAAGTAACTCAAGCTACGGTAG
AGTCTCCTAAAGTTACAGAAACCTCAGTCGAGGAATGTGAAAAAAGTACT
ACCATAGAACCCTCTGAAGATACACAAGAATCCGTTAAAGACACGCCAGA
ATCTTTGCAAGCTACTGAAGAGGACGTTGCGACGACGCCATCTGATACCG
TGGAACCTATTAATGTCACGCTCGAATCTGAGAACGTTTTTACGACCGAG
GAGGACGTCACAGAAACCAAATACGACGTCAACAACAATGAGATTTCTGA
CGAACCAGCGGGTGTTATCGTTGAAAATGATGATAAAATGTTGAACAATG
AACAAAAATCTGTTGAAAATCTTGTTGAGAAAGACATTTCTGTTGAATCT
GTTAAAAATGTTTCTGTTGACGAAAAAGTAGAACATTCTGTTGTAGATGA
TTATGTTGAAAAAGTATTCACCAAATCTGAAATCAACGACAAGGTAGAAG
TATCACCGTCTCCAGAAATCATTGATAACAAGGAAGAAGCTTTAAAGATA
GATTCCTTTAAGAACTCTGATGACGTTAAGTTTGCATCAGAGAATGTTGA
AGATGAAATAGTTGAAAAACTTTctactgaaaataaaaaatctgagGAGA
AGCCTGAGtttgaaaagtgggctgaaaaaGAGCCTAAGACGAAATCAGAG
GTGATTAAAAAAGTCAAGGAATCTCCCTCGGTCAAAACTGAGGAAAAGGA
ATCTACACTACCTAGCAGAAGGGAACGCCGCAGGGAATCTTCAACCACAA
CATCAAGCGAGAAGAAGGAATCCGTTATTTCTCCACGAAGAGAAAAGGCA
AAATCTCCAGAACCCCAGGAGGTCAAGGAATCGTCAAAATCTTCTATATC
CAAAAAAACAGAAGAAGCAAAAGTAGAGGACTCACCAAAACCTACGAACA
TCAGGGAATCATCGGAGCCTCTCAAATCTGAAAAGAGAGAGTCCAGAAGA
TCTCGAGAAAAATCCCCTGAAATCGAGAAACCCAAACCTAAGATGTCTTC
GCCAGAGCCAGCAAAGAGGGTTGAGAAGACACCACCAAAGACAAGCTCCA
AACCACCAAAAGATTCACCTAAGAAGTCGAAAGAACCAGAAGCCGAAAAG
AGCAAAAATGGGAAAGTCACCAGTCCTAAGAGCAGTCGCAAAATCGGTAG
TAAAATAAGTGGACTACTAAACAAAGTGAGTTCACCAAAATCGCAACGAA
AGACTATCACTTCACCCGCTGCCAAAGACAAGAAACATCTTTCACCAAAA
TCATCAAGGAAGCTAGCATCGAAATTTGAAGCACAGCCGACAGACCCTGA
CACAAAACAAATCAAGTCACCAccacctacttcaaagaagccCATAAAAT
CTCCACCACCTGCAGTCAAAGATAAACCCAAAAAGAACGCACTAAAAACA
CCAGAAAAATTAACCTCTACAAGCTCAGAAGTATCTGCTACGCCTGAAAG
ATCTTCGAAAGCTGCACCGCCGCCCACTTCACCCAAAAGATCAACACCGC
CAGCAGTCCAAGATAAACCTAAATCCTCTAAACCAGAGGAAACACCTTCC
GCCAAAAAGCAACCACCCTCGGCTTCAACCAAACCAAAGAAAACACCAGA
GCCTACAGAACCGAAAGATGTCACCGACAGCTCAAGACCGAAACCTCAAT
CGAGTATAACAAAACCTGAAGAAGACACCTCCTCGCCAAAAATCCCAGAT
CGACAAGACCGATTACGTAATCGAGTTGGAAGCCTAGGAAACAACGCCAA
AACAAATATGCCTGTATCTGGCAAAGATAAAAAAGGACTTTTTATGGCTT
GGGAAACACGTATGTCAACACCTGAACAATCGAGGCGAACCTATTCGACT
GCGTCTCCTTTAACCAATCGAAATCTGATTGCTGCACGAAAAGCCTCGCT
TAATAGACAAGCGAGTCAAGAGCGATCTTTCGATAGCGACGGCTCGTCTA
TTGAAGACCGAACGTCCTCACCTGTCGGTCGTTTTTCGAGAAATTCGTCA
GTCCGTGTGTCATTGAACGAAAANAACAAATATGCCTGTATCTGGCAAAG
ATAAAAAAGGACTTTTTATGGCTTGGGAAACCCGTATGTCAACACCTGAA
CAATCGAGGCGAACCTATTCGACTGCGTCTCCTTTAACCAATCGAAATCT
GATCGCTGCACGAAAAGTCTCGCTTAATAAACAAGCGAGTCAAGAGCGAT
CTTTCGATAGCGACGGCTCGTCTATTGAAGACCGAACATCCTCGCCTGTC
GGTCGTTTTTCGAGAAATTCGTCGGTCCGTGCCTCGTTGAACGAAAGTAA
CTTGTCGACGACTCGTAAGAGACTAGTTACGAAGCCCCATAGTATAGCGA
ACAATGGaagtgtcaaaaataaaatggcGATATTTGCCAAATTCCAAAAG
CAATGATTTAATGacaccattgagtttaaatttTTGGTaacataaaatta
aaatttgtacATACTTTGGAGCATTTTATTTCATAGGTCGAGAATTTTAA
TCAAACTGTTTATCCTCCAGTGCTTGGAGTCTCTGGGAAattagttttta
aaatttaggcGTTAAATCTTGACATATGAAATATAGTGTTCTCACTTCAT
CATATCTCGTATTAAATTTTGTATatacaattattttttttgcaattaag
aaaaataactgcttctgaaattttgctgctttaaGCTTCGAAATGACCTT
GTTTTGTCAAGAAAGCTTTTGAAGACTTTTATCATTGAATTCCCtaaatt
acagaaatattcTCTAAATCATAGCCAGAAAAGCTGTGGAATCCTGTGAA
GAAGCAAAATGAAGATTGATTAGATTatgattttaattattttataataa
cttttttgtaatttttattacagtatatttcaataaaaagtaaCAACAAT
ATTATAATCTTTACGAG
Run BLAST on NCBI

transcript from alignment at sc0000200:101187..112515+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014854 ID=TCONS_00014854|Name=TCONS_00014854|organism=Clytia hemisphaerica|type=transcript|length=11329bp|location=Sequence derived from alignment at sc0000200:101187..112515+ (Clytia hemisphaerica)
gtaaaagaaaaaaagatcgaTGAATAGAAGTTGATGAGTTATTTAACGAG
TATCTCAGGATTTGGAATAAAAATCATTTATTAATGCAGCTTGATTGAGA
AAggacatgaaaacaaaagtgtagtttttttttgaatagtAGTTATTCAT
ATTTGAGGGATTAGGGATTCAATTGATAACAGTCGCAGTTGCGAAGGTAA
TGTTTGTTCTACGAAACCACAggttaaaattgaatatttccTTGGGTTAT
TTTTGAAATCCCCCTTTGGGGTAAATGAAGACTAGCTGCTGAGTTCTTCc
agaaatttggtgaaaaatttacttttcttcAAATCTTTGAAGATTATCTT
TTCACTTAAACTctttttatacattttctatTGAATTTTCTTCATTCTAT
ACCTTTTTAATAATGGCAGACCTTGTAAGCCTTTATTGCCGAGTGCAAGG
TAAGTAAGAATGTAAAAGTTGTTCACTCGAACCTCAAGTGGACCTCGCAG
ATATGGGAGTGCTTTATCAGCCAGGATGTTGTAATTTTATATTGCATAGA
TTGTCAAAGGCTTTATTTATCAATTAAATAAAACGGCAGATGACTCGGAT
GTGAAAAAGTTAAAGATTCTTTTGCTGTTTGACAAATGGCCTTAATTTCA
ACCTTGGTGACGGCTATGTAAATTTGCACTAAATTAAACACAACTATCGA
CACGACTCGTTTTCGTTTCAAAGGAAGTTTTCCGATCAAATCAGGTGCCA
AAAGAGGTGATTGGTATTTTAAAAGAGCCTGGAATATTTCAACTTTTATT
AcaaattcttttctttcagaTCCACCAGCGGTGCGAATCAAGAAATCTCG
ATCATTCGAACTCGATAGAAAAGCGGAAGTCATGATCAACAAGGATCAAA
CCTTCGAATCCAAATATGAACTCCTGGAGGAGCTTGGAAAGTAAGCAGCC
ttgctatttttatttttccgctTTCAATTTCCTATCTAGCAAAAGAGTAG
TTTTAGCttgcttttttgcttttttgcttCTATTTTCAAACTCAAGCAAC
AGAAGCAATAAACTGCCTGTTTGAGATGTTTCTTTTTAAGACATTTGATG
GATATTAGGGATTTATCATAGCAGCAATGATACTTTCACACGTGTTCGGT
AATCCAAAGGGATCCGTTTCACACCAGTTAGAGCTTACAAAGGATCGATA
TTTCGGGAATATTTCGCTTAACGAAAGTATCCTACTTTTAgtggtttgtt
tacttttttaggGTTTTAATCTTTCGGCTTATGGATCGGTTTTCTCTACA
GAAAGATTGACGTGACTGTGTTATTAAGTAGAGGGTATCTTAATACCAAA
AAGTCACTATTTTCCAAGTTTGGATTCCTATGTCGGCCTTCATTTCAATA
GATTAAGATAATCGGATGATCTGAAGTAAACATGAAGCCCAAAAGTTCAC
AGAGAaccaaattttaaacaaaatggTGTCAAATCCGACAAAAGGCTggc
tacaattttttttcagataatcTTTCCCGTGTCAtttctgttattttttt
gtGTCCTGTTATTAATGGCAACAAAATCCTTAACTGTAATTATGATTAGC
TGTCATTGGAAatcaaacttaaaataaaattctGGAACGagaaggaaaat
ttgaaaaaatactgaAATGTCTATTCTAAATAAGGATTTGCTTTTCCGGG
AGACGTCATTTGGTCTATCATCGcagttatttttttcgaattcatTAAAT
TTCTGATGATGTtggtgtttgttttgattactgGTAGTAACAATAAATGG
ATAGTAACAGTTAATGAAAACAAATTAGCGTTTTTCCCTTTCTCAAAATT
GAACGTCATTTGCGATTTAAAGTGCTCTTCCTTATGCCTGAATTAAATGA
CCTCGTCTGAGGTGATATAAATATATTGCAATTTTATATGTTGACACTTC
CTTGGTTTTAACTGACGTTAAGGGACCCCCTGGACATACAGCTTCGGTTT
TGGGATCCTTTAATATAACCCTCGGTGAGTATAACCTCCtcaatgaaaaa
aaactgtTATCAATTAAGAACCCCTAGTTTAATTAACCTCGGCTAGACCC
TCCCTTGAATTTTTGAAgatgcccagctggcacacaacgttgttttaacg
ttcatctaacgttatatggacgttgtgaacgttagattaacgttgaaaca
acgttgtatgccagCTGGGTGTTGACCCACTGCAATCGCCCATATGCATT
TTACATATCCTTAACACTCCGTGTACCGACTGTTTGCATCGTTGAGATGA
TGTATGACTtaacaaaattatttgaaaattatcATTAACTCTATCCCAGA
TGTCTTTCTGGCAAGGACTTTAATGAAATTATTGTGAGCAGCTTTTTGTG
GGGTGAGACATTTCACCTAAAAAGCGTTGTGGTGTGTTTCCTGTCAGTTA
AACATCATTTGCAATAATTTGCACAATTTAATTAACTTGAAACACTATTA
GCAGAATCATTAGTatatattaagcagatattcgacaagaaaaatcggat
atcgaaaattattcagtcgagcttgatgatattcgacGAAGCGAAGCTGA
GTCGAATATTATTAAAACGAGACTGAATAATTTCGATATCCGACTTTTCA
CGTTGAATATATGGTTTATCGTTCACCAATTAGCAGAAAAGCATTGTAAT
TTTCCCTACTTCATTCAGTCTTTCTCTCTTTGTATgacattttcgaacgt
tttactatCTTATTAAGgatgtcaatttcattgtttttcattctttaatt
acataacgttcgaatttcctttctttctcttttgttaaaaagaactttct
tttatctatttaaataattatatcaaaaaactattttctttatgctcgct
gctacaaaagagatattttactatcggatatctaaaaatattcgacagtG
CGTTTTGCTTAGAGGTGGACGATAATAGTATATATTCAAAAGTCGTAAAA
AATTTATTGGACGTTATACAATATAGTTGATCACTTTCTTCCACGGCAAA
GAAAAAGAGGCCCATCTCACCCTCCTCCATCCTCTCCCCATTTTTCCCCC
TGAAAGATTCACAGGACAAAGTGAACCACCTAAAAAGAATGAcaatttcg
aaagaaatttttgtgattttgattcTAAGAATGTTTATCCTAGATTTATT
CGCCTGGCATCGGGCCTTTTATTAGCATATTGCTGTTCGTGGTGCGCTGT
GTGTCCGTTTTTGAGAAATCAGCGCTTTGTCAATTTCAAGTTAATTTTTA
AAGAACAGCGCCTTGTAACTACAACGTATACGCAAACCTTCGACTATTGC
TATGTCGCTTGGCCTTAATGCCGCTTCGGCTTCTTGttgtattttattaa
aataaagaaaaagtgaGAGTAccaaatacatgaaaataatgaaaaagttC
CAATTGTAAGAATCTTTTCAGGTTTTCATACACTATTTTATTTCTACGTT
TTATCAGGGGTATGTTCGGCACCGTCAAAAAATGTCAGTGTACAGACACC
GGCGTCGAATATGCGGCCAAAGTGGTCCGAAAGACCacgaaaaacaaaga
agaagttGTGCGTGAAGTATCCACTATGAACCTACTGCAACATAAATCCA
TTGCTCAAATCCACGATGCGTTCGAAAGCAAAAGACAGATGGTTATTGTC
ATGGAATTGATTCGCGGAAAAGAATTGTTCGAAAAAGTTTGTCAGGAGGA
TACTTTACTGACTGAGAAACAATGTGTTTATTATTTACGGCAAATTTTAT
CGGGCGTGGAATACATGCATAAAAAGAAGATTGTACATCTAGATCTGAAG
GTGAGTAGCTTCATTTTGGTAAACTTAGCCTTAGGGGGCATGGTCCTTTG
CCGAAATGATACCAGAAAATGAACACATTAACCTTGAACGAGATTTAAGC
TCTATCTTAGTCTTACAAGGATGACtagctattttttattttcagatatt
TTCAGACTGCCTAGCTTTGAGAAGTCAATCCAAAATAGCAGTAGTTATAC
ATGAAACGAGATGAAATCACTTATATTTACACTGAAAAATAGCTGATTAT
CTCTCTACTAAAAACATACTCTATAGAAACCATTCATTTCAATATCTATC
CTCGTTTTCAGCCGGAGAACATTCTGTGCATCGATTCACCACAAGGTTAT
GATGAAATCAAACTGATCGATTTCGGTTTAGCGAGAGATTTGTCATCCAC
CAAACAGTTATCCTGTATTTGCGGGACTCCTGAATTCGTTGGTAAGTCTA
TGTAGTTGCTTTAGTCCTGCAGATAAGGatttaaatagaccttttcataa
actacgttacgaacatcacttgcctcgttttgaaattattgccatggtga
tcaactcccagcggattttattaaaactacttcctattcataaaataatt
tattaacaccatggtaattgtttgaatacgaggcaagtgatgttcgtgac
gtaatttatgaaaaggtctatcaatATAGCCTTAACTGATGCTTTGACGt
tgctttgattttttaagcaaGCCGGGTGGGTCACCTTCCAAAACGGATTT
TGAATGTATAAAACCAGGACCAGCAAATTTAGAATTTCTACCGTCGTTCT
GGTTAAGATAACATTTTCCGTATTGAGATAACTATGGATATTTCTGATGC
TTTTATTTCACGGGTTAACCGGATGCAAAAGTTCCTCTTCAGGGGTTTTA
AGATATCTTTTGTCCAACCGATATAATGAATAACTTTCTGGGGCTTATTC
TCGAATTAGCCAATACCCTGGTCTTTTTCCGATGAAGAGTGGTCATTGAC
GTCTTGTCAGAATGTAGTGGCATCCTTTCAGAAGAAAAGTATTTCACACT
CATAAATCAACACTTTTCTCTTTCCAGCTCCCGAAGTCATcaatttcgat
ccaatcagcgTCCAATCAGACATGTGGTCATTAGGAGTCATAACGTACGT
CTTATTAAGTGGGATCTCTCCTTTCCTTGGTGATGATGATGGTGAAACAT
TGCAGAATGTCACTTTCGGTGAATTCGACTTTGAGGATGAAGATGGTGCT
TTTGAACACGTTTCTGAAATAGCTAAAGAATTCATTTCAGATCTACTCTG
TCTGAATCCAAGGTATGTACATTCCCTGCTGACATATaatgttgttttaa
cgttcatctaatgttcacaacgtccatataatgttGGGTTGAATATCTTC
GTCGAACCTTCATGACCAGGTGAAGTTAGCACATTAGTATCCGTAGCTTC
ATCAAGTCAGGAGGTATAAGCACCCCCTGGTCAAGCGTTAAATAATATGC
ATTTCATTTGCTTTATTATTTTCTATTGGGATCTGTTTCCTCGTTGTCAT
TCGTTGTTTTTTTAGATctgcaaacaagaaaaaagatGAAATTACGATAG
TCTGCATGAACCAGATGAAGGAAatttttattataaattcaAATCGTTTC
TTTTAGGGACCGTTTATNTTTTTTAGATctgcaaacaagaaaaaagatGA
AATTACGATAGTCTGCATGAACCAGATGGAGGAAATTTTTACTATAAATT
CAAATCGTTTCTTTTAGGGACCGTTTATCTGTGGGAGACTGTTTGGAACA
TTCCTGGTTAAACGTAAGTTCCATAATAGTATCACTCCATATCCTCGCTT
TAGTTTAACTGTCTTGAGCTGATTAAAGTTTAAAAGAATAAATACTTTAG
TTTCAGCCAGAACAGCTTCCCTTTTACCCAATAAGATTTGTACTTTCGAG
GGCGATGGAGTATGTCTGAAGCGATTCGGAATAACTCGCAACTTTGTCca
gcaaaatcgaggacgaaaACAGTGCTGATCAGGCCTATCCCGGAAGAGAA
CTTAATCAATCCGTAGATGATCTATTGTAGAAGTTTTTTTACAGTTGTAA
ATCAATGTTTTCCCAATAGTAAAGGAAAGTCTTCCCCATAAGTGAACCAA
TGTTTTCCACATCTTCGTTCAGACACAAACAAACGAGGAAGAATTAGACA
CCACCAATCTAAAGAAATTCATCGCAAGGCGACGGTGGCTGGTACGTACT
AACATATCCAATCCATTACGTAATAGCTTCTACTATACAACAAGGAAACG
ATAAAATCTTTTGTAGTCTTAAGGGTATTTATCAACTATCTGTGTTAAAG
ACACCTTTCAGCCTATACTTTTTACCGCAATGTTCGATCATaataatttc
ttaaaaaaccgTAAATTTGGAGCCCCAAAGAAAACATTCACGCAATTGTA
CGTGGCCGTGTTTCTAATTTTGCATATAGCCTCCAAATCTAAGTTACAAT
GCGTCGTCTACATcactaaaggttcaatctcaaaataagtgtcttggaaa
attagaaatcttgcaattctgttctgcctttgagattggcctttttgtca
tatGAACCCATTGACTATTCCTCTACAAGGAAAAagggcaatctcaatct
caaagatgatccaccacagtaaaacttttaattttacaaggtactaattt
tgagatttaaccTTTAGTCATGAGAACGGCGAATGCAGACACTAGAATAG
TTTTcattaatgggctcttccagaaaaaacgTCCATTCGAGAGACAAGag
tgattttttcgaaaaagatttttcatcaGCGAatatattgggctcttcca
gaaaaaatccgttcatggggggtggaggataNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccgtct
attcgggagacaagagtagtaTTATAATCATTATTTGATCTTTTCTTTTT
AGCGTACAATACACGCCATCAAGGCTGTCGGTCGTTTCAATCAAGTCGCC
AATTCGCTTGGCGGGAAAGGAAAGAAAGGCGGTGACTCCCTAGCTAAAAC
CATGCTTGCCGCCCTCAATGCCGCCAATAAAGAAAATTCCATTGACAAGG
AAGATGAAACTAAAGTTGAAGAAATAATCAGCCAATCAGCAGACGTGGAT
TCAAAATCTAACCAATCAGAGAGTGCTCCCGAAACCGTAATCGAATCAAA
TGGCTTCCACAAGGACAAACCTGCCCAATCAGAGATTGTTACTAATGGCA
ACACAGAGTCCACTTTTGGAGACGATGATGAAATGTCTGATATGTTAAAG
AAGCGAGCGGAAAGGAGGCGGAGAAAACgttttgaagatgaagaagagga
TTACGACGTCTTTGCAAACGTTTCCAATAGAGTAACGGAAGAAGTAACTC
AAGCTACGGTAGAGTCTCCTAAAGTTACAGAAACCTCAGTCGAGGAATGT
GAAAAAAGTACTACCATAGAACCCTCTGAAGATACACAAGAATCCGTTAA
AGACACGCCAGAATCTTTGCAAGCTACTGAAGAGGACGTTGCGACGACGC
CATCTGATACCGTGGAACCTATTAATGTCACGCTCGAATCTGAGAACGTT
TTTACGACCGAGGAGGACGTCACAGAAACCAAATACGACGTCAACAACAA
TGAGATTTCTGACGAACCAGCGGGTGTTATCGTTGAAAATGATGATAAAA
TGTTGAACAATGAACAAAAATCTGTTGAAAATCTTGTTGAGAAAGACATT
TCTGTTGAATCTGTTAAAAATGTTTCTGTTGACGAAAAAGTAGAACATTC
TGTTGTAGATGATTATGTTGAAAAAGTATTCACCAAATCTGAAATCAACG
ACAAGGTAGAAGTATCACCGTCTCCAGAAATCATTGATAACAAGGAAGAA
GCTTTAAAGATAGATTCCTTTAAGAACTCTGATGACGTTAAGTTTGCATC
AGAGAATGTTGAAGATGAAATAGTTGAAAAACTTTctactgaaaataaaa
aatctgagGAGAAGCCTGAGtttgaaaagtgggctgaaaaaGAGCCTAAG
ACGAAATCAGAGGTGATTAAAAAAGTCAAGGAATCTCCCTCGGTCAAAAC
TGAGGAAAAGGAATCTACACTACCTAGCAGAAGGGAACGCCGCAGGGAAT
CTTCAACCACAACATCAAGCGAGAAGAAGGAATCCGTTATTTCTCCACGA
AGAGAAAAGGCAAAATCTCCAGAACCCCAGGAGGTCAAGGAATCGTCAAA
ATCTTCTATATCCAAAAAAACAGAAGAAGCAAAAGTAGAGGACTCACCAA
AACCTACGAACATCAGGGAATCATCGGAGCCTCTCAAATCTGAAAAGAGA
GAGTCCAGAAGATCTCGAGAAAAATCCCCTGAAATCGAGAAACCCAAACC
TAAGATGTCTTCGCCAGAGCCAGCAAAGAGGGTTGAGAAGACACCACCAA
AGACAAGCTCCAAACCACCAAAAGATTCACCTAAGAAGTCGAAAGAACCA
GAAGCCGAAAAGAGCAAAAATGGGAAAGTCACCAGTCCTAAGAGCAGTCG
CAAAATCGGTAGTAAAATAAGTGGACTACTAAACAAAGTGAGTTCACCAA
AATCGCAACGAAAGACTATCACTTCACCCGCTGCCAAAGACAAGAAACAT
CTTTCACCAAAATCATCAAGGAAGCTAGCATCGAAATTTGAAGCACAGCC
GACAGACCCTGACACAAAACAAATCAAGTCACCAccacctacttcaaaga
agccCATAAAATCTCCACCACCTGCAGTCAAAGATAAACCCAAAAAGAAC
GCACTAAAAACACCAGAAAAATTAACCTCTACAAGCTCAGAAGTATCTGC
TACGCCTGAAAGATCTTCGAAAGCTGCACCGCCGCCCACTTCACCCAAAA
GATCAACACCGCCAGCAGTCCAAGATAAACCTAAATCCTCTAAACCAGAG
GAAACACCTTCCGCCAAAAAGCAACCACCCTCGGCTTCAACCAAACCAAA
GAAAACACCAGAGCCTACAGAACCGAAAGATGTCACCGACAGCTCAAGAC
CGAAACCTCAATCGAGTATAACAAAACCTGAAGAAGACACCTCCTCGCCA
AAAATCCCAGATCGACAAGACCGATTACGTAATCGAGTTGGAAGCCTAGG
AAACAACGCCAAAACAAATATGCCTGTATCTGGCAAAGATAAAAAAGGAC
TTTTTATGGCTTGGGAAACACGTATGTCAACACCTGAACAATCGAGGCGA
ACCTATTCGACTGCGTCTCCTTTAACCAATCGAAATCTGATTGCTGCACG
AAAAGCCTCGCTTAATAGACAAGCGAGTCAAGAGCGATCTTTCGATAGCG
ACGGCTCGTCTATTGAAGACCGAACGTCCTCACCTGTCGGTCGTTTTTCG
AGAAATTCGTCAGTCCGTGTGTCATTGAACGAAAANAACAAATATGCCTG
TATCTGGCAAAGATAAAAAAGGACTTTTTATGGCTTGGGAAACCCGTATG
TCAACACCTGAACAATCGAGGCGAACCTATTCGACTGCGTCTCCTTTAAC
CAATCGAAATCTGATCGCTGCACGAAAAGTCTCGCTTAATAAACAAGCGA
GTCAAGAGCGATCTTTCGATAGCGACGGCTCGTCTATTGAAGACCGAACA
TCCTCGCCTGTCGGTCGTTTTTCGAGAAATTCGTCGGTCCGTGCCTCGTT
GAACGAAAGTAACTTGTCGACGACTCGTAAGAGACTAGTTACGAAGCCCC
ATAGTATAGCGAACAATGGaagtgtcaaaaataaaatggcGATATTTGCC
AAATTCCAAAAGCAATGATTTAATGacaccattgagtttaaatttTTGGT
aacataaaattaaaatttgtacATACTTTGGAGCATTTTATTTCATAGGT
CGAGAATTTTAATCAAACTGTTTATCCTCCAGTGCTTGGAGTCTCTGGGA
AattagtttttaaaatttaggcGTTAAATCTTGACATATGAAATATAGTG
TTCTCACTTCATCATATCTCGTATTAAATTTTGTATatacaattattttt
tttgcaattaagaaaaataactgcttctgaaattttgctgctttaaGCTT
CGAAATGACCTTGTTTTGTCAAGAAAGCTTTTGAAGACTTTTATCATTGA
ATTCCCtaaattacagaaatattcTCTAAATCATAGCCAGAAAAGCTGTG
GAATCCTGTGAAGAAGCAAAATGAAGATTGATTAGATTatgattttaatt
attttataataacttttttgtaatttttattacagtatatttcaataaaa
agtaaCAACAATATTATAATCTTTACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008318XLOC_008318Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014854-exon-sc0000200-1491911889:101187..101382TCONS_00014854-exon-sc0000200-1491911889:101187..101382Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1510915933:101187..101382TCONS_00014854-exon-sc0000200-1510915933:101187..101382Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1575043694:101187..101382TCONS_00014854-exon-sc0000200-1575043694:101187..101382Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1491911889:102006..102126TCONS_00014854-exon-sc0000200-1491911889:102006..102126Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1510915933:102006..102126TCONS_00014854-exon-sc0000200-1510915933:102006..102126Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1575043694:102006..102126TCONS_00014854-exon-sc0000200-1575043694:102006..102126Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1491911889:104694..105036TCONS_00014854-exon-sc0000200-1491911889:104694..105036Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1510915933:104694..105036TCONS_00014854-exon-sc0000200-1510915933:104694..105036Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1575043694:104694..105036TCONS_00014854-exon-sc0000200-1575043694:104694..105036Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1491911889:105348..105477TCONS_00014854-exon-sc0000200-1491911889:105348..105477Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1510915933:105348..105477TCONS_00014854-exon-sc0000200-1510915933:105348..105477Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1575043694:105348..105477TCONS_00014854-exon-sc0000200-1575043694:105348..105477Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1491911889:106114..106348TCONS_00014854-exon-sc0000200-1491911889:106114..106348Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1510915933:106114..106348TCONS_00014854-exon-sc0000200-1510915933:106114..106348Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1575043694:106114..106348TCONS_00014854-exon-sc0000200-1575043694:106114..106348Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1491911889:106804..106849TCONS_00014854-exon-sc0000200-1491911889:106804..106849Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1510915933:106804..106849TCONS_00014854-exon-sc0000200-1510915933:106804..106849Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1575043694:106804..106849TCONS_00014854-exon-sc0000200-1575043694:106804..106849Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1491911889:107209..107277TCONS_00014854-exon-sc0000200-1491911889:107209..107277Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1510915933:107209..107277TCONS_00014854-exon-sc0000200-1510915933:107209..107277Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1575043694:107209..107277TCONS_00014854-exon-sc0000200-1575043694:107209..107277Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1491911889:109139..112515TCONS_00014854-exon-sc0000200-1491911889:109139..112515Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1510915933:109139..112515TCONS_00014854-exon-sc0000200-1510915933:109139..112515Clytia hemisphaericaexon
TCONS_00014854-exon-sc0000200-1575043694:109139..112515TCONS_00014854-exon-sc0000200-1575043694:109139..112515Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000200supercontigsc0000200:101187..112515 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0729569	0	1.48511	1.08022	1.24457	0.191466	0	0.419121	0.771141	34.9531	30.2392	18.4624	14.5198	4.06675	9.16867	5.13294	6.26841	0.976983	1.60994	0.977683	2.27421	1.09757	1.45855	47.9935	51.8418	2.86312	0.818853
Blast
[Close]
BLAST of TCONS_00014854 vs. Swiss-Prot (Human)
Match: MYLK (Myosin light chain kinase, smooth muscle OS=Homo sapiens GN=MYLK PE=1 SV=4)

HSP 1 Score: 288.886 bits (738), Expect = 9.038e-79
Identity = 148/315 (46.98%), Postives = 210/315 (66.67%), Query Frame = 1 
Query:  256 VMINKDQTFESKYELLEELGKGMFGTVKKCQCTDTGVEYAAKVVRK-TTKNKEEVVREVSTMNLLQHKSIAQIHDAFESKRQMVIVMELIRGKELFEKVCQEDTLLTEKQCVYYLRQILSGVEYMHKKKIVHLDLKPENILCIDSPQGYDEIKLIDFGLARDLSSTKQLSCICGTPEFVAPEVINFDPISVQSDMWSLGVITYVLLSGISPFLGDDDGETLQNVTXXXXXXXXXXXXXXHVSEIAKEFISDLLCLNPRDRLSVGDCLEHSWLNTQTNEEE---LDTTNLKKFIARRRWLRTIHAIKAVGRFNQVA 1188
            V IN +Q     Y++ E LG G FG V +     T   +A K  +  + K KE + +E+S MN L H  + Q  DAFE K  +V+V+E++ G ELFE++  ED  LTE++C+ Y+RQI  GVEY+HK+ IVHLDLKPENI+C++  +    IKLIDFGLAR L +   L  + GTPEFVAPEVIN++PI   +DMWS+GVI Y+L+SG+SPF+GD+D ETL NVT     ++ +D AF+ +S+ AK+FIS+LL  + ++RL    CL+H WL   T   E   L    +KK++ARR+W +T +A++A+GR + +A
Sbjct: 1452 VTINTEQKVSDFYDIEERLGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKEKENIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDFELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMCVN--KTGTRIKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYEPIGYATDMWSIGVICYILVSGLSPFMGDNDNETLANVT--SATWDFDDEAFDEISDDAKDFISNLLKKDMKNRLDCTQCLQHPWLMKDTKNMEAKKLSKDRMKKYMARRKWQKTGNAVRAIGRLSSMA 1762
The following BLAST results are available for this feature:
BLAST of TCONS_00014854 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYLK9.038e-7946.98Myosin light chain kinase, smooth muscle OS=Homo s... [more]
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