TCONS_00014852 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014852
Unique NameTCONS_00014852
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4563

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014852 ID=TCONS_00014852|Name=TCONS_00014852|organism=Clytia hemisphaerica|type=transcript|length=4563bp
CAACAGTGTGAGGAGTATTTTTGTCATAGATATACATATAATCAACTTAA
CTTTTAATCAAAGTAgacaaattttctcaaaatccaaACAAAACAATTCG
AGCCCCTCTTATACCTTGGCcatatcaaaaatcaatttgtaagtagattt
aaaatatattacagAAAAATGACAAGTCAAAAGGGTACAGAAGCTTTTTG
AGCTGATATTTTACAGAGTTGGACCAGCAGGTTTTTGACAACaTCCACCA
GCGGTGCGAATCAAGAAATCTCGATCATTCGAACTCGATAGAAAAGCGGA
AGTCATGATCAACAAGGATCAAACCTTCGAATCCAAATATGAACTCCTGG
AGGAGCTTGGAAAGGGTATGTTCGGCACCGTCAAAAAATGTCAGTGTACA
GACACCGGCGTCGAATATGCGGCCAAAGTGGTCCGAAAGACCacgaaaaa
caaagaagaagttGTGCGTGAAGTATCCACTATGAACCTACTGCAACATA
AATCCATTGCTCAAATCCACGATGCGTTCGAAAGCAAAAGACAGATGGTT
ATTGTCATGGAATTGATTCGCGGAAAAGAATTGTTCGAAAAAGTTTGTCA
GGAGGATACTTTACTGACTGAGAAACAATGTGTTTATTATTTACGGCAAA
TTTTATCGGGCGTGGAATACATGCATAAAAAGAAGATTGTACATCTAGAT
CTGAAGCCGGAGAACATTCTGTGCATCGATTCACCACAAGGTTATGATGA
AATCAAACTGATCGATTTCGGTTTAGCGAGAGATTTGTCATCCACCAAAC
AGTTATCCTGTATTTGCGGGACTCCTGAATTCGTTGCTCCCGAAGTCATc
aatttcgatccaatcagcgTCCAATCAGACATGTGGTCATTAGGAGTCAT
AACGTACGTCTTATTAAGTGGGATCTCTCCTTTCCTTGGTGATGATGATG
GTGAAACATTGCAGAATGTCACTTTCGGTGAATTCGACTTTGAGGATGAA
GATGGTGCTTTTGAACACGTTTCTGAAATAGCTAAAGAATTCATTTCAGA
TCTACTCTGTCTGAATCCAAGGGACCGTTTATCTGTGGGAGACTGTTTGG
AACATTCCTGGTTAAACACACAAACAAACGAGGAAGAATTAGACACCACC
AATCTAAAGAAATTCATCGCAAGGCGACGGTGGCTGCGTACAATACACGC
CATCAAGGCTGTCGGTCGTTTCAATCAAGTCGCCAATTCGCTTGGCGGGA
AAGGAAAGAAAGGCGGTGACTCCCTAGCTAAAACCATGCTTGCCGCCCTC
AATGCCGCCAATAAAGAAAATTCCATTGACAAGGAAGATGAAACTAAAGT
TGAAGAAATAATCAGCCAATCAGCAGACGTGGATTCAAAATCTAACCAAT
CAGAGAGTGCTCCCGAAACCGTAATCGAATCAAATGGCTTCCACAAGGAC
AAACCTGCCCAATCAGAGATTGTTACTAATGGCAACACAGAGTCCACTTT
TGGAGACGATGATGAAATGTCTGATATGTTAAAGAAGCGAGCGGAAAGGA
GGCGGAGAAAACgttttgaagatgaagaagaggaTTACGACGTCTTTGCA
AACGTTTCCAATAGAGTAACGGAAGAAGTAACTCAAGCTACGGTAGAGTC
TCCTAAAGTTACAGAAACCTCAGTCGAGGAATGTGAAAAAAGTACTACCA
TAGAACCCTCTGAAGATACACAAGAATCCGTTAAAGACACGCCAGAATCT
TTGCAAGCTACTGAAGAGGACGTTGCGACGACGCCATCTGATACCGTGGA
ACCTATTAATGTCACGCTCGAATCTGAGAACGTTTTTACGACCGAGGAGG
ACGTCACAGAAACCAAATACGACGTCAACAACAATGAGATTTCTGACGAA
CCAGCGGGTGTTATCGTTGAAAATGATGATAAAATGTTGAACAATGAACA
AAAATCTGTTGAAAATCTTGTTGAGAAAGACATTTCTGTTGAATCTGTTA
AAAATGTTTCTGTTGACGAAAAAGTAGAACATTCTGTTGTAGATGATTAT
GTTGAAAAAGTATTCACCAAATCTGAAATCAACGACAAGGTAGAAGTATC
ACCGTCTCCAGAAATCATTGATAACAAGGAAGAAGCTTTAAAGATAGATT
CCTTTAAGAACTCTGATGACGTTAAGTTTGCATCAGAGAATGTTGAAGAT
GAAATAGTTGAAAAACTTTctactgaaaataaaaaatctgagGAGAAGCC
TGAGtttgaaaagtgggctgaaaaaGAGCCTAAGACGAAATCAGAGGTGA
TTAAAAAAGTCAAGGAATCTCCCTCGGTCAAAACTGAGGAAAAGGAATCT
ACACTACCTAGCAGAAGGGAACGCCGCAGGGAATCTTCAACCACAACATC
AAGCGAGAAGAAGGAATCCGTTATTTCTCCACGAAGAGAAAAGGCAAAAT
CTCCAGAACCCCAGGAGGTCAAGGAATCGTCAAAATCTTCTATATCCAAA
AAAACAGAAGAAGCAAAAGTAGAGGACTCACCAAAACCTACGAACATCAG
GGAATCATCGGAGCCTCTCAAATCTGAAAAGAGAGAGTCCAGAAGATCTC
GAGAAAAATCCCCTGAAATCGAGAAACCCAAACCTAAGATGTCTTCGCCA
GAGCCAGCAAAGAGGGTTGAGAAGACACCACCAAAGACAAGCTCCAAACC
ACCAAAAGATTCACCTAAGAAGTCGAAAGAACCAGAAGCCGAAAAGAGCA
AAAATGGGAAAGTCACCAGTCCTAAGAGCAGTCGCAAAATCGGTAGTAAA
ATAAGTGGACTACTAAACAAAGTGAGTTCACCAAAATCGCAACGAAAGAC
TATCACTTCACCCGCTGCCAAAGACAAGAAACATCTTTCACCAAAATCAT
CAAGGAAGCTAGCATCGAAATTTGAAGCACAGCCGACAGACCCTGACACA
AAACAAATCAAGTCACCAccacctacttcaaagaagccCATAAAATCTCC
ACCACCTGCAGTCAAAGATAAACCCAAAAAGAACGCACTAAAAACACCAG
AAAAATTAACCTCTACAAGCTCAGAAGTATCTGCTACGCCTGAAAGATCT
TCGAAAGCTGCACCGCCGCCCACTTCACCCAAAAGATCAACACCGCCAGC
AGTCCAAGATAAACCTAAATCCTCTAAACCAGAGGAAACACCTTCCGCCA
AAAAGCAACCACCCTCGGCTTCAACCAAACCAAAGAAAACACCAGAGCCT
ACAGAACCGAAAGATGTCACCGACAGCTCAAGACCGAAACCTCAATCGAG
TATAACAAAACCTGAAGAAGACACCTCCTCGCCAAAAATCCCAGATCGAC
AAGACCGATTACGTAATCGAGTTGGAAGCCTAGGAAACAACGCCAAAACA
AATATGCCTGTATCTGGCAAAGATAAAAAAGGACTTTTTATGGCTTGGGA
AACACGTATGTCAACACCTGAACAATCGAGGCGAACCTATTCGACTGCGT
CTCCTTTAACCAATCGAAATCTGATTGCTGCACGAAAAGCCTCGCTTAAT
AGACAAGCGAGTCAAGAGCGATCTTTCGATAGCGACGGCTCGTCTATTGA
AGACCGAACGTCCTCACCTGTCGGTCGTTTTTCGAGAAATTCGTCAGTCC
GTGTGTCATTGAACGAAAANAACAAATATGCCTGTATCTGGCAAAGATAA
AAAAGGACTTTTTATGGCTTGGGAAACCCGTATGTCAACACCTGAACAAT
CGAGGCGAACCTATTCGACTGCGTCTCCTTTAACCAATCGAAATCTGATC
GCTGCACGAAAAGTCTCGCTTAATAAACAAGCGAGTCAAGAGCGATCTTT
CGATAGCGACGGCTCGTCTATTGAAGACCGAACATCCTCGCCTGTCGGTC
GTTTTTCGAGAAATTCGTCGGTCCGTGCCTCGTTGAACGAAAGTAACTTG
TCGACGACTCGTAAGAGACTAGTTACGAAGCCCCATAGTATAGCGAACAA
TGGaagtgtcaaaaataaaatggcGATATTTGCCAAATTCCAAAAGCAAT
GATTTAATGacaccattgagtttaaatttTTGGTaacataaaattaaaat
ttgtacATACTTTGGAGCATTTTATTTCATAGGTCGAGAATTTTAATCAA
ACTGTTTATCCTCCAGTGCTTGGAGTCTCTGGGAAattagtttttaaaat
ttaggcGTTAAATCTTGACATATGAAATATAGTGTTCTCACTTCATCATA
TCTCGTATTAAATTTTGTATatacaattattttttttgcaattaagaaaa
ataactgcttctgaaattttgctgctttaaGCTTCGAAATGACCTTGTTT
TGTCAAGAAAGCTTTTGAAGACTTTTATCATTGAATTCCCtaaattacag
aaatattcTCTAAATCATAGCCAGAAAAGCTGTGGAATCCTGTGAAGAAG
CAAAATGAAGATTGATTAGATTatgattttaattattttataataacttt
tttgtaatttttattacagtatatttcaataaaaagtaaCAACAATATTA
TAATCTTTACGAG
Run BLAST on NCBI

transcript from alignment at sc0000200:96941..112515+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014852 ID=TCONS_00014852|Name=TCONS_00014852|organism=Clytia hemisphaerica|type=transcript|length=15575bp|location=Sequence derived from alignment at sc0000200:96941..112515+ (Clytia hemisphaerica)
CAACAGTGTGAGGAGTATTTTTGTCATAGATATACATATAATCAACTTAA
CTTTTAATCAAAGTAgacaaattttctcaaaatccaaACAAAACAATTCG
AGCCCCTCTTATACCTTGGCcatatcaaaaatcaatttgtaagtagattt
aaaatatattacagAAAAATGACAAGTCAAAAGGGTACAGAAGCTTTTTG
AGCTGATATTTTACAGAGTTGGACCAGCAGGTTTTTGACAACGTAAGTTT
TTTCAATGGTTTTGTGGATGTTGGCTCTAAGATTAGATTTGTTGCAGTTG
CAAAATGTAAAGCTCAAAGCTTCTAAAAAACAACTGCAACAAACATCAGT
CGAATCTTCAGTCAAAAGTCCAGGAAAGTACATCTGTGGACatacttttc
aaagaaaatatgcAAGAAATTTGAAAAGCCTCCCGTTAACTCTTAAACTG
ACTTAAACAATGCTACCTCCCAAAAAAGACGCTTTCTTTTTACCCTCTTT
TCCCTTTTTcctatctggtaccagatgtggaaattcgatacgacacgctt
tgctctggAGGTCGGGcaaattttgatattgaatATATCGGCCCGCTCCT
TTaaaagctttagcgtgggcggcggccaatacgccatcggaatatcagat
agccctttttaatgtttttcatgaGAGAAAGCGTAAATAAAATATTAATT
CACTTACGTCCTTGTGACGTTTCCCTGCTTCCGCCGGGCATGAAACTAAT
GCTAagtaaaactctaaattttcttaCAATTTGAAATACATTTGGACCAG
CACGTAcacaaatcaataattaaacATTTATTTTCCTTATTTGTGCATTG
TTGTACCCCAATTTAAAAACCCTTGTAATGTAATTAAGATATCGATTACA
TCAATAGAACGAAATATCATCCGTTGATGAGGTATTTTTATTGCATAATG
ACCCTCTGATGTCAATTCGATCCAAATCGGTCACGTTACAGATGATGGCT
TCTCTTGATAAGGAAATTCATATTCAGGCACTTTAATCATAGTCACATAA
CCTCAATTTTCGACGTTTCGACCACGGAGACTGTTCGTAAAGGAATCCTA
GGGGAAGCTATTGGTGGCGGCATGACCTATGGTGAACAAGTCTGTCACGT
CAAGGATGACGGGTTCATAGTAAGGCGTTCTCCATCGCCTCATACTGTTC
AGCCATGGACTTTGTCAAAGAATCCTCAGGAAAAGTAGTTGCTGGCAGCC
CTAGCAATGCCCTGATCTAAAGTGATAGCACATCAAATGAGAAGATGGGC
CGAAAATCCCTGATGTACGATTGGCTTACTATGATAAAGTGAATTTCCCA
ATGGAGCTCTATTGTTTAAAATCTTCTTGGNTTGGCTTACCATGATAAAG
TGGATTTCCCAATGGAGCTCTTATACCTATTGTTTAAAATCCTCTTGAag
ttttgagacaggggtgttgaaTACTTGTCGAGGTTTGAGACTGGGGATTC
AATGCTTATCTAGGCTCTGAGAGGCTTTGGTTTTTGAATACTTGTCGAGg
ttttgaaacaggggtgttgAATGTTTATCGAGATGCAGATGAAAATTTTC
GATACTTACTGAGACGGGAGAATCGGAGAATAAATAAAACCAGTACTGag
gaagaaagaagaaagaacatGCTAGCACAATGATAGTAGGAGAGACAGGC
ATTCAAACATTGGTCACACAAATTGAGTAATCAGACCATATAAAGTTTAG
TAAGGTGATGTTAATGGAGTTATCATTTACAGTCACTTCCGCACTATACT
TAGATTATAATCGAAATCTACTTAAGACAGATTTATATTATTTTAGATTT
ACATTATACATTTACTTCGTCCTTGCATTTCTGAAGTCAAAAATTGTACA
AGGATTACTATTTATACTATATCTTCCTAAAATCGAGTATAAGGTTTATA
GAGGCAGCAATGAGGAATGATTCTAACAAATTGCGTGATAAGTATTTCAC
TACATACCCTCTATACCATTCTCTATGTTATGCACTTCTAAATGATCTGT
GAACTTATGATACGTTGGAAAGATTATTCTGTATGGGTCATTTTAATAAC
ACTCGGACAGGTTTTGGTTGAAAATTTTCGCTAATATCGAAAAAAAATGT
ACCCtgaatggaagaaaatttcaaaatttcttttttcgaatccctaaatt
ttccaaaacaGACATCACGAGGGACTTATATTTACGTGTTCATGTTTTTT
CTACTCTACCTAGATCTCGCGAAGTGAAAAATCCTGTCCAGCGGCACAAT
TTCGTGTTCCTTTTTTGGTTAAGTAGGGCCTAAGTACCAACCCAACAAAA
CAACCGTTAAACCATCTGCATTATTGCTATGAGATTCAAAAGTAAaagaa
gctaaaaattgaaGTTAATAAAAAGTGGAAAGCTCTATAATTGATGAGAT
CTAAATACGTGCAAGTAGGATAAAGTTGATATCAAATTGGCTTAAAATGG
CATCACTTTGCTGGTATTTTTTTcggtatttttctgaaaaacgaTTAAAA
CGTCATAATTGTGAATTGAATTAGCCGCAAATCTATTTTTTTCAGATCTT
TTATACAGTGGGAGAGTTTCTTCGTTGTTGTTGTCAGCCATGAGCTCGTG
CCCAAACCTCTTATGGAATTTAATGTTTGATGATTTGTTGATTTTAACAA
TTCCTCAAATTTGGATTAATGAGGGATTACCAAAATTGTTTGTTTGTGAA
TTGAAATCCAATTAGAGCTCTAATAACATATATTACATGGTCTTAACAAG
TAAAGAGAACAGTAGATATAGTAGGTATCTTGAGTTGGCCAGAGGTACAG
GTTATGCAACAGGTTTTTACTTGATATGaattgattctgttgattaGTTT
TGTTATTGCCAAGTGAAGAAGAAGACTTTGGTACCTTGGATTTATTCAGT
AGCCTTTGTGTTTGTTTGTTAAGAGAAGGGAAGAATGCAATTGAAGAATT
ATTTCATCGGTAAGACTGTGTCACAAACTCTTGGGACCATCGCCCCACTA
GAAAATCTAGCCAAAATCTTTTCCCCAGTAGGAAAAATACCCTTCAATTT
CAGCATCACTGGAAAATTGATTCTCTTTGTTATTGCCTCTTTATATCTAT
TCGTGTTTCTTTGGACGTGAAAAAACGCAGAGTCGAGGAGATTTTTAGTC
GAAACTCCGGGAGACAAAAAATAAGTTCCTGTTTAATCAgagtttaaaga
aggaaaaataattttgaaataagtttttctgGTTTCTCAGATACTTTCCA
AGAAAAACATTGTATAATTTAATAGAAGGCTGTGGTTTTGTCATCATCTG
ATGACGTGGTGATATGAAAAATTGGTGGGGACGTTCTTGAGAGTATCATT
TTTGTCTTTAGAAATCTTGTCTGCGTTGTTTCTACGTCTCACGCAGACTT
TTTGGATGCGAAAGTTGACGTTTTTGCATTATTTCGTGAGAATTGGCCCA
ACATTGGTCTTGCGTTTTTATGGTACTAAAGTTAAGGCCGTTAGATTTCC
CTTCTCCCCTCTTAAGCAAGTAAAAACTTTCAGCCAATAATGATCAAATG
AAGGATGACGACGAGGGGGCTGGGGTGGTAAAAATCTTGATGGNAGATTT
CCCTTCTCCCCTCTTAAGCAAGTAAAAACTTTTAGCCAATAATGATAAAA
TGAAGGATGACGACGAGGGGGCTGGGGTGGTAAAAATCTTGATGGCTTGG
GATCTTAATTTTATTACTTATAACTCAAAAATACCAGTAGGAATGAGATT
TCCGTGCACTATTCCAGTGAAGTTGGATAGATATTTTCTATATTCtattt
tgttttggaggactacattttttttaaatctagcgatatATTTTAGTTTC
AGTTcggcatttgtgtaaaaactacgtgCAGTCAAATAAGTGGTCTCATT
TTCCATCTAGGAGTCTcatctctagcccttcgggcttaaaactcaatCGT
TCAAACCATCAGAGTATCTtaatgttggaaaaaagccataAGTCAAAAGC
CAAGAGGTTGGCTCTTCCAACAAAAACGTCCTAAAACTGTCTGACGGACA
AGTGACGTCACTTTGTtgtcaaacaaaaacaaagaatccTATTGGTTCTC
GATTGCGTAACCTTTTTTAATAACCTCACTGTAGACCACAAAATCATGTA
ATTCGTGAAATTGATACATACTTGACGAGAGAGCTATTAAAAggctgtaa
aagaaaaaaagatcgaTGAATAGAAGTTGATGAGTTATTTAACGAGTATC
TCAGGATTTGGAATAAAAATCATTTATTAATGCAGCTTGATTGAGAAAgg
acatgaaaacaaaagtgtagtttttttttgaatagtAGTTATTCATATTT
GAGGGATTAGGGATTCAATTGATAACAGTCGCAGTTGCGAAGGTAATGTT
TGTTCTACGAAACCACAggttaaaattgaatatttccTTGGGTTATTTTT
GAAATCCCCCTTTGGGGTAAATGAAGACTAGCTGCTGAGTTCTTCcagaa
atttggtgaaaaatttacttttcttcAAATCTTTGAAGATTATCTTTTCA
CTTAAACTctttttatacattttctatTGAATTTTCTTCATTCTATACCT
TTTTAATAATGGCAGACCTTGTAAGCCTTTATTGCCGAGTGCAAGGTAAG
TAAGAATGTAAAAGTTGTTCACTCGAACCTCAAGTGGACCTCGCAGATAT
GGGAGTGCTTTATCAGCCAGGATGTTGTAATTTTATATTGCATAGATTGT
CAAAGGCTTTATTTATCAATTAAATAAAACGGCAGATGACTCGGATGTGA
AAAAGTTAAAGATTCTTTTGCTGTTTGACAAATGGCCTTAATTTCAACCT
TGGTGACGGCTATGTAAATTTGCACTAAATTAAACACAACTATCGACACG
ACTCGTTTTCGTTTCAAAGGAAGTTTTCCGATCAAATCAGGTGCCAAAAG
AGGTGATTGGTATTTTAAAAGAGCCTGGAATATTTCAACTTTTATTAcaa
attcttttctttcagaTCCACCAGCGGTGCGAATCAAGAAATCTCGATCA
TTCGAACTCGATAGAAAAGCGGAAGTCATGATCAACAAGGATCAAACCTT
CGAATCCAAATATGAACTCCTGGAGGAGCTTGGAAAGTAAGCAGCCttgc
tatttttatttttccgctTTCAATTTCCTATCTAGCAAAAGAGTAGTTTT
AGCttgcttttttgcttttttgcttCTATTTTCAAACTCAAGCAACAGAA
GCAATAAACTGCCTGTTTGAGATGTTTCTTTTTAAGACATTTGATGGATA
TTAGGGATTTATCATAGCAGCAATGATACTTTCACACGTGTTCGGTAATC
CAAAGGGATCCGTTTCACACCAGTTAGAGCTTACAAAGGATCGATATTTC
GGGAATATTTCGCTTAACGAAAGTATCCTACTTTTAgtggtttgtttact
tttttaggGTTTTAATCTTTCGGCTTATGGATCGGTTTTCTCTACAGAAA
GATTGACGTGACTGTGTTATTAAGTAGAGGGTATCTTAATACCAAAAAGT
CACTATTTTCCAAGTTTGGATTCCTATGTCGGCCTTCATTTCAATAGATT
AAGATAATCGGATGATCTGAAGTAAACATGAAGCCCAAAAGTTCACAGAG
AaccaaattttaaacaaaatggTGTCAAATCCGACAAAAGGCTggctaca
attttttttcagataatcTTTCCCGTGTCAtttctgttatttttttgtGT
CCTGTTATTAATGGCAACAAAATCCTTAACTGTAATTATGATTAGCTGTC
ATTGGAAatcaaacttaaaataaaattctGGAACGagaaggaaaatttga
aaaaatactgaAATGTCTATTCTAAATAAGGATTTGCTTTTCCGGGAGAC
GTCATTTGGTCTATCATCGcagttatttttttcgaattcatTAAATTTCT
GATGATGTtggtgtttgttttgattactgGTAGTAACAATAAATGGATAG
TAACAGTTAATGAAAACAAATTAGCGTTTTTCCCTTTCTCAAAATTGAAC
GTCATTTGCGATTTAAAGTGCTCTTCCTTATGCCTGAATTAAATGACCTC
GTCTGAGGTGATATAAATATATTGCAATTTTATATGTTGACACTTCCTTG
GTTTTAACTGACGTTAAGGGACCCCCTGGACATACAGCTTCGGTTTTGGG
ATCCTTTAATATAACCCTCGGTGAGTATAACCTCCtcaatgaaaaaaaac
tgtTATCAATTAAGAACCCCTAGTTTAATTAACCTCGGCTAGACCCTCCC
TTGAATTTTTGAAgatgcccagctggcacacaacgttgttttaacgttca
tctaacgttatatggacgttgtgaacgttagattaacgttgaaacaacgt
tgtatgccagCTGGGTGTTGACCCACTGCAATCGCCCATATGCATTTTAC
ATATCCTTAACACTCCGTGTACCGACTGTTTGCATCGTTGAGATGATGTA
TGACTtaacaaaattatttgaaaattatcATTAACTCTATCCCAGATGTC
TTTCTGGCAAGGACTTTAATGAAATTATTGTGAGCAGCTTTTTGTGGGGT
GAGACATTTCACCTAAAAAGCGTTGTGGTGTGTTTCCTGTCAGTTAAACA
TCATTTGCAATAATTTGCACAATTTAATTAACTTGAAACACTATTAGCAG
AATCATTAGTatatattaagcagatattcgacaagaaaaatcggatatcg
aaaattattcagtcgagcttgatgatattcgacGAAGCGAAGCTGAGTCG
AATATTATTAAAACGAGACTGAATAATTTCGATATCCGACTTTTCACGTT
GAATATATGGTTTATCGTTCACCAATTAGCAGAAAAGCATTGTAATTTTC
CCTACTTCATTCAGTCTTTCTCTCTTTGTATgacattttcgaacgtttta
ctatCTTATTAAGgatgtcaatttcattgtttttcattctttaattacat
aacgttcgaatttcctttctttctcttttgttaaaaagaactttctttta
tctatttaaataattatatcaaaaaactattttctttatgctcgctgcta
caaaagagatattttactatcggatatctaaaaatattcgacagtGCGTT
TTGCTTAGAGGTGGACGATAATAGTATATATTCAAAAGTCGTAAAAAATT
TATTGGACGTTATACAATATAGTTGATCACTTTCTTCCACGGCAAAGAAA
AAGAGGCCCATCTCACCCTCCTCCATCCTCTCCCCATTTTTCCCCCTGAA
AGATTCACAGGACAAAGTGAACCACCTAAAAAGAATGAcaatttcgaaag
aaatttttgtgattttgattcTAAGAATGTTTATCCTAGATTTATTCGCC
TGGCATCGGGCCTTTTATTAGCATATTGCTGTTCGTGGTGCGCTGTGTGT
CCGTTTTTGAGAAATCAGCGCTTTGTCAATTTCAAGTTAATTTTTAAAGA
ACAGCGCCTTGTAACTACAACGTATACGCAAACCTTCGACTATTGCTATG
TCGCTTGGCCTTAATGCCGCTTCGGCTTCTTGttgtattttattaaaata
aagaaaaagtgaGAGTAccaaatacatgaaaataatgaaaaagttCCAAT
TGTAAGAATCTTTTCAGGTTTTCATACACTATTTTATTTCTACGTTTTAT
CAGGGGTATGTTCGGCACCGTCAAAAAATGTCAGTGTACAGACACCGGCG
TCGAATATGCGGCCAAAGTGGTCCGAAAGACCacgaaaaacaaagaagaa
gttGTGCGTGAAGTATCCACTATGAACCTACTGCAACATAAATCCATTGC
TCAAATCCACGATGCGTTCGAAAGCAAAAGACAGATGGTTATTGTCATGG
AATTGATTCGCGGAAAAGAATTGTTCGAAAAAGTTTGTCAGGAGGATACT
TTACTGACTGAGAAACAATGTGTTTATTATTTACGGCAAATTTTATCGGG
CGTGGAATACATGCATAAAAAGAAGATTGTACATCTAGATCTGAAGGTGA
GTAGCTTCATTTTGGTAAACTTAGCCTTAGGGGGCATGGTCCTTTGCCGA
AATGATACCAGAAAATGAACACATTAACCTTGAACGAGATTTAAGCTCTA
TCTTAGTCTTACAAGGATGACtagctattttttattttcagatattTTCA
GACTGCCTAGCTTTGAGAAGTCAATCCAAAATAGCAGTAGTTATACATGA
AACGAGATGAAATCACTTATATTTACACTGAAAAATAGCTGATTATCTCT
CTACTAAAAACATACTCTATAGAAACCATTCATTTCAATATCTATCCTCG
TTTTCAGCCGGAGAACATTCTGTGCATCGATTCACCACAAGGTTATGATG
AAATCAAACTGATCGATTTCGGTTTAGCGAGAGATTTGTCATCCACCAAA
CAGTTATCCTGTATTTGCGGGACTCCTGAATTCGTTGGTAAGTCTATGTA
GTTGCTTTAGTCCTGCAGATAAGGatttaaatagaccttttcataaacta
cgttacgaacatcacttgcctcgttttgaaattattgccatggtgatcaa
ctcccagcggattttattaaaactacttcctattcataaaataatttatt
aacaccatggtaattgtttgaatacgaggcaagtgatgttcgtgacgtaa
tttatgaaaaggtctatcaatATAGCCTTAACTGATGCTTTGACGttgct
ttgattttttaagcaaGCCGGGTGGGTCACCTTCCAAAACGGATTTTGAA
TGTATAAAACCAGGACCAGCAAATTTAGAATTTCTACCGTCGTTCTGGTT
AAGATAACATTTTCCGTATTGAGATAACTATGGATATTTCTGATGCTTTT
ATTTCACGGGTTAACCGGATGCAAAAGTTCCTCTTCAGGGGTTTTAAGAT
ATCTTTTGTCCAACCGATATAATGAATAACTTTCTGGGGCTTATTCTCGA
ATTAGCCAATACCCTGGTCTTTTTCCGATGAAGAGTGGTCATTGACGTCT
TGTCAGAATGTAGTGGCATCCTTTCAGAAGAAAAGTATTTCACACTCATA
AATCAACACTTTTCTCTTTCCAGCTCCCGAAGTCATcaatttcgatccaa
tcagcgTCCAATCAGACATGTGGTCATTAGGAGTCATAACGTACGTCTTA
TTAAGTGGGATCTCTCCTTTCCTTGGTGATGATGATGGTGAAACATTGCA
GAATGTCACTTTCGGTGAATTCGACTTTGAGGATGAAGATGGTGCTTTTG
AACACGTTTCTGAAATAGCTAAAGAATTCATTTCAGATCTACTCTGTCTG
AATCCAAGGTATGTACATTCCCTGCTGACATATaatgttgttttaacgtt
catctaatgttcacaacgtccatataatgttGGGTTGAATATCTTCGTCG
AACCTTCATGACCAGGTGAAGTTAGCACATTAGTATCCGTAGCTTCATCA
AGTCAGGAGGTATAAGCACCCCCTGGTCAAGCGTTAAATAATATGCATTT
CATTTGCTTTATTATTTTCTATTGGGATCTGTTTCCTCGTTGTCATTCGT
TGTTTTTTTAGATctgcaaacaagaaaaaagatGAAATTACGATAGTCTG
CATGAACCAGATGAAGGAAatttttattataaattcaAATCGTTTCTTTT
AGGGACCGTTTATNTTTTTTAGATctgcaaacaagaaaaaagatGAAATT
ACGATAGTCTGCATGAACCAGATGGAGGAAATTTTTACTATAAATTCAAA
TCGTTTCTTTTAGGGACCGTTTATCTGTGGGAGACTGTTTGGAACATTCC
TGGTTAAACGTAAGTTCCATAATAGTATCACTCCATATCCTCGCTTTAGT
TTAACTGTCTTGAGCTGATTAAAGTTTAAAAGAATAAATACTTTAGTTTC
AGCCAGAACAGCTTCCCTTTTACCCAATAAGATTTGTACTTTCGAGGGCG
ATGGAGTATGTCTGAAGCGATTCGGAATAACTCGCAACTTTGTCcagcaa
aatcgaggacgaaaACAGTGCTGATCAGGCCTATCCCGGAAGAGAACTTA
ATCAATCCGTAGATGATCTATTGTAGAAGTTTTTTTACAGTTGTAAATCA
ATGTTTTCCCAATAGTAAAGGAAAGTCTTCCCCATAAGTGAACCAATGTT
TTCCACATCTTCGTTCAGACACAAACAAACGAGGAAGAATTAGACACCAC
CAATCTAAAGAAATTCATCGCAAGGCGACGGTGGCTGGTACGTACTAACA
TATCCAATCCATTACGTAATAGCTTCTACTATACAACAAGGAAACGATAA
AATCTTTTGTAGTCTTAAGGGTATTTATCAACTATCTGTGTTAAAGACAC
CTTTCAGCCTATACTTTTTACCGCAATGTTCGATCATaataatttcttaa
aaaaccgTAAATTTGGAGCCCCAAAGAAAACATTCACGCAATTGTACGTG
GCCGTGTTTCTAATTTTGCATATAGCCTCCAAATCTAAGTTACAATGCGT
CGTCTACATcactaaaggttcaatctcaaaataagtgtcttggaaaatta
gaaatcttgcaattctgttctgcctttgagattggcctttttgtcatatG
AACCCATTGACTATTCCTCTACAAGGAAAAagggcaatctcaatctcaaa
gatgatccaccacagtaaaacttttaattttacaaggtactaattttgag
atttaaccTTTAGTCATGAGAACGGCGAATGCAGACACTAGAATAGTTTT
cattaatgggctcttccagaaaaaacgTCCATTCGAGAGACAAGagtgat
tttttcgaaaaagatttttcatcaGCGAatatattgggctcttccagaaa
aaatccgttcatggggggtggaggataNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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gggagacaagagtagtaTTATAATCATTATTTGATCTTTTCTTTTTAGCG
TACAATACACGCCATCAAGGCTGTCGGTCGTTTCAATCAAGTCGCCAATT
CGCTTGGCGGGAAAGGAAAGAAAGGCGGTGACTCCCTAGCTAAAACCATG
CTTGCCGCCCTCAATGCCGCCAATAAAGAAAATTCCATTGACAAGGAAGA
TGAAACTAAAGTTGAAGAAATAATCAGCCAATCAGCAGACGTGGATTCAA
AATCTAACCAATCAGAGAGTGCTCCCGAAACCGTAATCGAATCAAATGGC
TTCCACAAGGACAAACCTGCCCAATCAGAGATTGTTACTAATGGCAACAC
AGAGTCCACTTTTGGAGACGATGATGAAATGTCTGATATGTTAAAGAAGC
GAGCGGAAAGGAGGCGGAGAAAACgttttgaagatgaagaagaggaTTAC
GACGTCTTTGCAAACGTTTCCAATAGAGTAACGGAAGAAGTAACTCAAGC
TACGGTAGAGTCTCCTAAAGTTACAGAAACCTCAGTCGAGGAATGTGAAA
AAAGTACTACCATAGAACCCTCTGAAGATACACAAGAATCCGTTAAAGAC
ACGCCAGAATCTTTGCAAGCTACTGAAGAGGACGTTGCGACGACGCCATC
TGATACCGTGGAACCTATTAATGTCACGCTCGAATCTGAGAACGTTTTTA
CGACCGAGGAGGACGTCACAGAAACCAAATACGACGTCAACAACAATGAG
ATTTCTGACGAACCAGCGGGTGTTATCGTTGAAAATGATGATAAAATGTT
GAACAATGAACAAAAATCTGTTGAAAATCTTGTTGAGAAAGACATTTCTG
TTGAATCTGTTAAAAATGTTTCTGTTGACGAAAAAGTAGAACATTCTGTT
GTAGATGATTATGTTGAAAAAGTATTCACCAAATCTGAAATCAACGACAA
GGTAGAAGTATCACCGTCTCCAGAAATCATTGATAACAAGGAAGAAGCTT
TAAAGATAGATTCCTTTAAGAACTCTGATGACGTTAAGTTTGCATCAGAG
AATGTTGAAGATGAAATAGTTGAAAAACTTTctactgaaaataaaaaatc
tgagGAGAAGCCTGAGtttgaaaagtgggctgaaaaaGAGCCTAAGACGA
AATCAGAGGTGATTAAAAAAGTCAAGGAATCTCCCTCGGTCAAAACTGAG
GAAAAGGAATCTACACTACCTAGCAGAAGGGAACGCCGCAGGGAATCTTC
AACCACAACATCAAGCGAGAAGAAGGAATCCGTTATTTCTCCACGAAGAG
AAAAGGCAAAATCTCCAGAACCCCAGGAGGTCAAGGAATCGTCAAAATCT
TCTATATCCAAAAAAACAGAAGAAGCAAAAGTAGAGGACTCACCAAAACC
TACGAACATCAGGGAATCATCGGAGCCTCTCAAATCTGAAAAGAGAGAGT
CCAGAAGATCTCGAGAAAAATCCCCTGAAATCGAGAAACCCAAACCTAAG
ATGTCTTCGCCAGAGCCAGCAAAGAGGGTTGAGAAGACACCACCAAAGAC
AAGCTCCAAACCACCAAAAGATTCACCTAAGAAGTCGAAAGAACCAGAAG
CCGAAAAGAGCAAAAATGGGAAAGTCACCAGTCCTAAGAGCAGTCGCAAA
ATCGGTAGTAAAATAAGTGGACTACTAAACAAAGTGAGTTCACCAAAATC
GCAACGAAAGACTATCACTTCACCCGCTGCCAAAGACAAGAAACATCTTT
CACCAAAATCATCAAGGAAGCTAGCATCGAAATTTGAAGCACAGCCGACA
GACCCTGACACAAAACAAATCAAGTCACCAccacctacttcaaagaagcc
CATAAAATCTCCACCACCTGCAGTCAAAGATAAACCCAAAAAGAACGCAC
TAAAAACACCAGAAAAATTAACCTCTACAAGCTCAGAAGTATCTGCTACG
CCTGAAAGATCTTCGAAAGCTGCACCGCCGCCCACTTCACCCAAAAGATC
AACACCGCCAGCAGTCCAAGATAAACCTAAATCCTCTAAACCAGAGGAAA
CACCTTCCGCCAAAAAGCAACCACCCTCGGCTTCAACCAAACCAAAGAAA
ACACCAGAGCCTACAGAACCGAAAGATGTCACCGACAGCTCAAGACCGAA
ACCTCAATCGAGTATAACAAAACCTGAAGAAGACACCTCCTCGCCAAAAA
TCCCAGATCGACAAGACCGATTACGTAATCGAGTTGGAAGCCTAGGAAAC
AACGCCAAAACAAATATGCCTGTATCTGGCAAAGATAAAAAAGGACTTTT
TATGGCTTGGGAAACACGTATGTCAACACCTGAACAATCGAGGCGAACCT
ATTCGACTGCGTCTCCTTTAACCAATCGAAATCTGATTGCTGCACGAAAA
GCCTCGCTTAATAGACAAGCGAGTCAAGAGCGATCTTTCGATAGCGACGG
CTCGTCTATTGAAGACCGAACGTCCTCACCTGTCGGTCGTTTTTCGAGAA
ATTCGTCAGTCCGTGTGTCATTGAACGAAAANAACAAATATGCCTGTATC
TGGCAAAGATAAAAAAGGACTTTTTATGGCTTGGGAAACCCGTATGTCAA
CACCTGAACAATCGAGGCGAACCTATTCGACTGCGTCTCCTTTAACCAAT
CGAAATCTGATCGCTGCACGAAAAGTCTCGCTTAATAAACAAGCGAGTCA
AGAGCGATCTTTCGATAGCGACGGCTCGTCTATTGAAGACCGAACATCCT
CGCCTGTCGGTCGTTTTTCGAGAAATTCGTCGGTCCGTGCCTCGTTGAAC
GAAAGTAACTTGTCGACGACTCGTAAGAGACTAGTTACGAAGCCCCATAG
TATAGCGAACAATGGaagtgtcaaaaataaaatggcGATATTTGCCAAAT
TCCAAAAGCAATGATTTAATGacaccattgagtttaaatttTTGGTaaca
taaaattaaaatttgtacATACTTTGGAGCATTTTATTTCATAGGTCGAG
AATTTTAATCAAACTGTTTATCCTCCAGTGCTTGGAGTCTCTGGGAAatt
agtttttaaaatttaggcGTTAAATCTTGACATATGAAATATAGTGTTCT
CACTTCATCATATCTCGTATTAAATTTTGTATatacaattattttttttg
caattaagaaaaataactgcttctgaaattttgctgctttaaGCTTCGAA
ATGACCTTGTTTTGTCAAGAAAGCTTTTGAAGACTTTTATCATTGAATTC
CCtaaattacagaaatattcTCTAAATCATAGCCAGAAAAGCTGTGGAAT
CCTGTGAAGAAGCAAAATGAAGATTGATTAGATTatgattttaattattt
tataataacttttttgtaatttttattacagtatatttcaataaaaagta
aCAACAATATTATAATCTTTACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008318XLOC_008318Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014852-exon-sc0000200-1491911889:96941..97182TCONS_00014852-exon-sc0000200-1491911889:96941..97182Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1510915933:96941..97182TCONS_00014852-exon-sc0000200-1510915933:96941..97182Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1575043694:96941..97182TCONS_00014852-exon-sc0000200-1575043694:96941..97182Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1491911889:102006..102126TCONS_00014852-exon-sc0000200-1491911889:102006..102126Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1510915933:102006..102126TCONS_00014852-exon-sc0000200-1510915933:102006..102126Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1575043694:102006..102126TCONS_00014852-exon-sc0000200-1575043694:102006..102126Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1491911889:104694..105036TCONS_00014852-exon-sc0000200-1491911889:104694..105036Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1510915933:104694..105036TCONS_00014852-exon-sc0000200-1510915933:104694..105036Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1575043694:104694..105036TCONS_00014852-exon-sc0000200-1575043694:104694..105036Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1491911889:105348..105477TCONS_00014852-exon-sc0000200-1491911889:105348..105477Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1510915933:105348..105477TCONS_00014852-exon-sc0000200-1510915933:105348..105477Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1575043694:105348..105477TCONS_00014852-exon-sc0000200-1575043694:105348..105477Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1491911889:106114..106348TCONS_00014852-exon-sc0000200-1491911889:106114..106348Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1510915933:106114..106348TCONS_00014852-exon-sc0000200-1510915933:106114..106348Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1575043694:106114..106348TCONS_00014852-exon-sc0000200-1575043694:106114..106348Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1491911889:106804..106849TCONS_00014852-exon-sc0000200-1491911889:106804..106849Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1510915933:106804..106849TCONS_00014852-exon-sc0000200-1510915933:106804..106849Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1575043694:106804..106849TCONS_00014852-exon-sc0000200-1575043694:106804..106849Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1491911889:107209..107277TCONS_00014852-exon-sc0000200-1491911889:107209..107277Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1510915933:107209..107277TCONS_00014852-exon-sc0000200-1510915933:107209..107277Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1575043694:107209..107277TCONS_00014852-exon-sc0000200-1575043694:107209..107277Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1491911889:109139..112515TCONS_00014852-exon-sc0000200-1491911889:109139..112515Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1510915933:109139..112515TCONS_00014852-exon-sc0000200-1510915933:109139..112515Clytia hemisphaericaexon
TCONS_00014852-exon-sc0000200-1575043694:109139..112515TCONS_00014852-exon-sc0000200-1575043694:109139..112515Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000200supercontigsc0000200:96941..112515 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	1.31892e-07	0	0	0	0	0	0	0	0.235044	0.125666	0	0	0	0.487554	0.133989	0.484536	0.453288	0	0.345168	0.225924	0.354548	1.41518	0.668765	0	0	0	0
Blast
[Close]
BLAST of TCONS_00014852 vs. Swiss-Prot (Human)
Match: MYLK (Myosin light chain kinase, smooth muscle OS=Homo sapiens GN=MYLK PE=1 SV=4)

HSP 1 Score: 288.5 bits (737), Expect = 1.308e-78
Identity = 148/315 (46.98%), Postives = 210/315 (66.67%), Query Frame = 2 
Query:  302 VMINKDQTFESKYELLEELGKGMFGTVKKCQCTDTGVEYAAKVVRK-TTKNKEEVVREVSTMNLLQHKSIAQIHDAFESKRQMVIVMELIRGKELFEKVCQEDTLLTEKQCVYYLRQILSGVEYMHKKKIVHLDLKPENILCIDSPQGYDEIKLIDFGLARDLSSTKQLSCICGTPEFVAPEVINFDPISVQSDMWSLGVITYVLLSGISPFLGDDDGETLQNVTXXXXXXXXXXXXXXHVSEIAKEFISDLLCLNPRDRLSVGDCLEHSWLNTQTNEEE---LDTTNLKKFIARRRWLRTIHAIKAVGRFNQVA 1234
            V IN +Q     Y++ E LG G FG V +     T   +A K  +  + K KE + +E+S MN L H  + Q  DAFE K  +V+V+E++ G ELFE++  ED  LTE++C+ Y+RQI  GVEY+HK+ IVHLDLKPENI+C++  +    IKLIDFGLAR L +   L  + GTPEFVAPEVIN++PI   +DMWS+GVI Y+L+SG+SPF+GD+D ETL NVT     ++ +D AF+ +S+ AK+FIS+LL  + ++RL    CL+H WL   T   E   L    +KK++ARR+W +T +A++A+GR + +A
Sbjct: 1452 VTINTEQKVSDFYDIEERLGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKEKENIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDFELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMCVN--KTGTRIKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYEPIGYATDMWSIGVICYILVSGLSPFMGDNDNETLANVT--SATWDFDDEAFDEISDDAKDFISNLLKKDMKNRLDCTQCLQHPWLMKDTKNMEAKKLSKDRMKKYMARRKWQKTGNAVRAIGRLSSMA 1762
The following BLAST results are available for this feature:
BLAST of TCONS_00014852 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYLK1.308e-7846.98Myosin light chain kinase, smooth muscle OS=Homo s... [more]
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