TCONS_00014845 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014845
Unique NameTCONS_00014845
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1850

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014845 ID=TCONS_00014845|Name=TCONS_00014845|organism=Clytia hemisphaerica|type=transcript|length=1850bp
GGAATCGACGGTAACGTGCCAAATAAGGATTCTTTAATCTATATTTCAAA
TCTCAAGGGAATACCTGCATTGCTaacacaaagaaaatcaaagtgTACAA
ATCATTAAAACACACGCGTCAACATAATTCCCTTGGGATCTATTGAAACG
TTAACAAAAATGTgtctaaaaacatttttcaatcaCAAACGAATTGTAGC
AAATCAAGAAAGTGGTTTGAGAGTAGTTGAGTTTATTTTagttgaaaaaa
aatgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGA
TGCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAAT
GGAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCC
AAAGGAGAaGACATCTCAAACAGTCAACAAAATCAATATGGCGGACGAAT
TGAGCTATATACAACAAATGAAAGAATCTGTAGTGCAGCGAGCGCATGTT
TTCAAAGAAGCAGAACAAGAATATAACAAGGAACAACAGAGTGAACTAAG
GGTGGCATCCACGAAGCTTCAAAAACAAAttatgaaagatgaaaaaatta
gatTGAAGTCTAAACGTGAAGCTCCTCGATCAACTGAACCAGATTACATT
GCCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTtctccagca
tcaaaacaaaagaggAATCCCACCTGTCAATCATCACATGACCAATAAGA
ACCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATT
AAACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGG
AGATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGATCTCATTG
AACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACAGAGC
ACCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAAGCTCA
TCAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGTGAAA
ACAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGCCGAG
AGGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaatagaagG
TCGTCTTGACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCAT
TGGAAGTCTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCA
AGCAATGGAAACGGGACAGCAACAAGACGTGGTAGCAAAACGGAAACAAT
ATCAACAACTGTCACGCGTGAATGTAAACTTGGTCATCAAATCAAAAAGT
CTGGGAACGAGTTTGTTGATAAATCATGTTATAATGATGACGGTGATTGC
GTGCCTGAAGGAATCATCAACCACCGGAGACAGGTATATCAATCTTCATG
AGCTTTAAGATGGTTCGGTTTGGTCCAAAATAGTGTTTcgtcaaaaatta
aaatgatactgtaaagttttattgttttcaaaagtttttttataaaatat
tgtaaatattttgtttttaatatatttttaaatcaaaaaagcAACCAGAC
AAATAATTAGTATTTAAATATGATGGGAAAACTACATTTCGCATTTTTGT
TCATTTACTTACCCTATTAAAGcccgggggcactcgatttcgaaaacgac
cgtacgttcggccaaaaattaggtctctaaaatcggacccttacagtgca
ggaaaaatttggctgaaaatcgacccttatagtaCAATTTTTCGCaaagg
gcaaaattttttgaaatttctcaaattttacctcaaaatttggtattttc
Run BLAST on NCBI

protein sequence of TCONS_00014845-protein

>TCONS_00014845-protein ID=TCONS_00014845-protein|Name=TCONS_00014845-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
MSTTIKDSRERSDSLKMLQNYGKSTNTVTNVVNGVKFVGKIKLIQQAESP
KEKTSQTVNKINMADELSYIQQMKESVVQRAHVFKEAEQEYNKEQQSELR
VASTKLQKQIMKDEKIRLKSKREAPRSTEPDYIAKERQMYEKVEQAFLQH
QNKRGIPPVNHHMTNKNQSDRHLITDCQSESVIKQHVIEDDQSDDSGLSG
DTDSLCSFVDKERDLIEQTEEMFQKFEALHKQSTASDLSKMKTSVSVEAH
QPASKADSTRNSLISENSNFVKDSLLVRLQIAERNAVKSKENYFSWKIEG
RLDDALDAEEDYHAFSLEVSKLKKKILQLEKESSNGNGTATRRGSKTETI
STTVTRECKLGHQIKKSGNEFVDKSCYNDDGDCVPEGIINHRRQVYQSS
Run BLAST on NCBI

transcript from alignment at sc0000200:41050..45994+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014845 ID=TCONS_00014845|Name=TCONS_00014845|organism=Clytia hemisphaerica|type=transcript|length=4945bp|location=Sequence derived from alignment at sc0000200:41050..45994+ (Clytia hemisphaerica)
GGAATCGACGGTAACGTGCCAAATAAGGATTCTTTAATCTATATTTCAAA
TCTCAAGGGAATACCTGCATTGCTaacacaaagaaaatcaaagtgTACAA
ATCATTAAAACACACGCGTCAACATAATTCCCTTGGGATCTATTGAAACG
TTAACAAAAATGTgtctaaaaacatttttcaatcaCAAACGAATTGTAGC
AAATCAAGAAAGTGGTTTGAGAGTAGTTGAGTTTATTTTagttgaaaaaa
aatgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGA
TGCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAAT
GGAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCC
AAAGGAGAagtaaatttgtttatttttaattatttttttttaataaacag
CAACCTCTGGTTCTTTTGACACAGAgacttaaaaaaattcttattttgag
TATTAGGAAGTATTAAGACACCTCTTGAAGACTGtgttttaaaaaaaggg
gtacaCAAAATATATGTTAATTTTTCTTACGGTTCTTCTCCAGGACATCT
CAAACAGTCAACAAAATCAATATGGCGGACGAATTGAGCTATATACAACA
AATGAAAGAATCTGTAGTGCAGCGAGCGCATGTTTTCAAAGAAGCAGAAC
AAGAATATAACAAGGAACAACAGGTAAATGCGAAATTGTCGAATCTTCAA
GATATTCTTTACCTCATATTTTGACAAAGAAGAACAAAgaatagaatttt
tcaaaatttgttctCGTTCAACGCGTGGAAGAGGAATAAATTCTCTCTAA
GGCTCTAAGatattatttcttttgtttcaaaacgATGTGGATGAGATACG
TTTAATGATGCGCTTTAGGTGTGGTTGACACATATTTCTACAAGATCAAA
TCAACTAAATTTTGATCGAAGATAAGTAAAAACCAAAAAGGGTTTGAGCT
TCTGTTATTTTTAATTGGgattgttttgaaaaacttgCACTGTTTACAGA
TGCAGTTTATCTTTCTTTCAGAGTGAACTAAGGGTGGCATCCACGAAGCT
TCAAAAACAAAttatgaaagatgaaaaaattagatTGAAGTCTAAACGTG
AAGGTATGTATCGAActggttgaaaaatttgactGATTCACAAAACATTT
CTTGGATATTTGACAATCACATAAACAGTTTGTAATCTGGATAAGGTTTT
GGTTAATTGCTCCCCAGATCCCAAATTTCAGTTCCTGTCTTTACTCCAAC
CAAATAGGGAAAATTATCCGGAATATTGTACGCTTTCTTCCCTTGCGCTG
GTCAAACCACCAAGCTTCTGTATCTGTAGTCTTTCGGCTAAATACGATCA
TGGAAcagatatttgagacaaagaaaatttccctgcgaaattttaaacac
cacaaatgattttaagtgcgttaaactacagttggaaagtagagtcttga
gacttaagacttaaggaTCGCAGGATTTAAaagatttaaaagctcaaatt
tgctcgaataaggATTGGAAACGCCACCGAACTGTTCGAAAATCGAgtta
ttcaatgaaagaaagtggaagtgctcaAATAgtaattctcgcccgaactt
taaattctgaaaaacgtgaaaatagactaaaattaatacatttcgaccat
gattgtagattatTGACGTATTTATTTCTCATAGCTCCTCGATCAACTGA
ACCAGATTACATTGCCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAG
CATTtctccagcatcaaaacaaaagaggAATCCCACCTGTCAATCATCAC
ATGACCAATAAGAACCAATCAGATCGACACCTAATTACTGATTGCCAATC
AGAGAGCGTAATTAAACAACACGTGATCGAAGATGACCAATCAGATGACT
CAGGTCTATCAGGAGATACCGATTCATTATGTAGTTTTGTTGGTGAGAAA
CCcttcttattattttgttatcTTTCGATTCAGATCGACTGTATCGGTAA
AAGGAAATAAATACATTTGCAGGAAAAGGAATACTCGTCAAAAACACCCA
TAATAGACCTTATCATAAATTATGTCATGAGCAACGCTTACCTTGCTTTT
AAAATATTATGGTAATCCCCAGAAGAGTTTATAATAAGTTGAAGACTCGG
GGGGATTTAATTACCTAagcaatggtttcaaaacgaggtagTCGTTACAC
TCAAAACAATCAATGTAAAGACCTATAAGGCAATGATCCAGAAACAAGAA
AAGATCACTGTCATtgtttcgcttgttaaaaatttatgtGTTCTACATTG
AGTTaaaagtccgaagggctagagtagaatctaacctttctcaggcaaga
aaaactGAGGCAACTATCATCCCATCCAGAACGTGCCTAGAATGCgtcgc
aatcatgacgacgaattgtatctagtggttcttTCGTTTTTGAGGACCTA
TTTtttctagcgatagattttactttcaatccggtgtttgtgtaaaaatc
acgcgcgggcgttctggatgggaaattaagTGGCTCATTTCCCATTCAGG
AGTCTCGAGTTtatcccttcgggcttggaagtcaatggtgtTCTACATCC
GTGAATAATTTTATCACTTATGCTTCTCTTTTAGACAAGGAACGAGATCT
CATTGAACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAAC
AGAGCACCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAA
GCTCATCAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAG
TGAAAACAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCG
CCGAGAGGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaata
gaaggtttgaattttttttccatggagACGTGTTTCTACCcctattagtt
tttttttgtatcTAAAAATGTTTGTGTATTTCCCAGAACGAAATATGCAC
TTCCATAAttgaattttcaccaaaaattttctgctttttcagGTCGTCTT
GACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATTGGAAGT
CTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCAAGCAATG
GAAACGGGACAGCAACAAGGTACTGTATATTTTTATAGATACAAGTTACT
cacgcttattcgaacttctattattcaaatatttctttaattcAAACTTG
TTTTTAGTCCCCGTCAATGAAAAACCCTGTTAAGATATtctctataattt
gaatctctctaaaattcgcttaaataaatTTACCGCTCGATTTTGAATCA
GTGAAAGCCAACTATACTTTACTCAGATTTTAGCCTGaagaaaaatttac
tggttaagtgtattttcaaatcagtaaatatttcaaaacacaatatttta
aaaaatccgCAAACTCTCTTTACACTTCATATTTTCCAAGACGTGGTAGC
AAAACGGAAACAATATCAACAACTGTCACGCGTGAATGTAAACTTGGTCA
TCAAATCAAAAAGTCTGGGAACGAGTTTGTTGATAAATCATGTTATAATG
ATGACGGTGATTGCGTGCCTGAAGGAATCATCAACCACCGGAGACAGGTA
CCAATTTGTAACTATATATTTCAGCTTTGACTTATCTCTGCCTTAAGCTC
TTGTCCTTTTTACTAATATATCCATGTGGGATCCCTGTCTCAATTCTGTT
ACATGTTTTCCCAGGAGAGACACTTACAAAAAATTGGGTACGAGGACGTG
TCGCTGGTCAGGGTCCctttttaggctctgaagatattcTGACAGGGTTC
CAAGTTTACTAACTTTCAAGATGTGTATAtgacagggtcgacttttgaga
atttttttacaattttcagggtagcattaaaaattgttttccaTTTTNga
cttttgagaattttttacaattttcaggGCAGCATTAAAAATTGCTTTCC
ATTTCTCGTTTtcttttagtcattttggccACATTTCAGGGTGAAAATCG
ATTTATCTTtatgacagggtcccaaattcaCCAGatatgtatttgaaagt
ttctatttttcaaattccagcggcacgtccccgtcagctgtcaaggtcag
tgcccccggGCATGTTTTCTTTAAAGGAACgtccaaaatttatttaaaac
agCCCTCGGatgttatcaatttttttgagttttaagcgtaaaaatgttct
caaaatcttcttattttcaccattttgtgagtattttttgcAAACAATTT
ATTCAGGAATTTGGTGTTTTAAAGTCTACAAAGCCTAAAGTGTTCTCACA
TTTTGGCAATCAAagccttatatagtttgttcaaGTGCACACTCTTCACT
TATCTAAGCTATGTTATACCCTTCCTCTGCCCCTGTTACACCCCTGCCTA
AGTACTGAGCTTATATTTTACTTTCTAGGTATATCAATCTTCATGAGCTT
TAAGATGGTTCGGTTTGGTCCAAAATAGTGTTTcgtcaaaaattaaaatg
atactgtaaagttttattgttttcaaaagtttttttataaaatattgtaa
atattttgtttttaatatatttttaaatcaaaaaagcAACCAGACAAATA
ATTAGTATTTAAATATGATGGGAAAACTACATTTCGCATTTTTGTTCATT
TACTTACCCTATTAAAGcccgggggcactcgatttcgaaaacgaccgtac
gttcggccaaaaattaggtctctaaaatcggacccttacagtgcaggaaa
aatttggctgaaaatcgacccttatagtaCAATTTTTCGCaaagggcaaa
attttttgaaatttctcaaattttacctcaaaatttggtattttc

Coding sequence (CDS) from alignment at sc0000200:41050..45994+

>TCONS_00014845 ID=TCONS_00014845|Name=TCONS_00014845|organism=Clytia hemisphaerica|type=CDS|length=9600bp|location=Sequence derived from alignment at sc0000200:41050..45994+ (Clytia hemisphaerica)
atgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGAT
GCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAATG
GAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCCA
AAGGAGAaGACATCTCAAACAGTCAACAAAATCAATATGGCGGACGAATT
GAGCTATATACAACAAATGAAAGAATCTGTAGTGCAGCGAGCGCATGTTT
TCAAAGAAGCAGAACAAGAATATAACAAGGAACAACAGAGTGAACTAAGG
GTGGCATCCACGAAGCTTCAAAAACAAAttatgaaagatgaaaaaattag
atTGAAGTCTAAACGTGAAGCTCCTCGATCAACTGAACCAGATTACATTG
CCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTtctccagcat
caaaacaaaagaggAATCCCACCTGTCAATCATCACATGACCAATAAGAA
CCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATTA
AACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGGA
GATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGATCTCATTGA
ACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACAGAGCA
CCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAAGCTCAT
CAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGTGAAAA
CAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGCCGAGA
GGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaatagaagGT
CGTCTTGACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATT
GGAAGTCTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCAA
GCAATGGAAACGGGACAGCAACAAGACGTGGTAGCAAAACGGAAACAATA
TCAACAACTGTCACGCGTGAATGTAAACTTGGTCATCAAATCAAAAAGTC
TGGGAACGAGTTTGTTGATAAATCATGTTATAATGATGACGGTGATTGCG
TGCCTGAAGGAATCATCAACCACCGGAGACAGGTATATCAATCTTCATGA
atgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGAT
GCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAATG
GAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCCA
AAGGAGAaGACATCTCAAACAGTCAACAAAATCAATATGGCGGACGAATT
GAGCTATATACAACAAATGAAAGAATCTGTAGTGCAGCGAGCGCATGTTT
TCAAAGAAGCAGAACAAGAATATAACAAGGAACAACAGAGTGAACTAAGG
GTGGCATCCACGAAGCTTCAAAAACAAAttatgaaagatgaaaaaattag
atTGAAGTCTAAACGTGAAGCTCCTCGATCAACTGAACCAGATTACATTG
CCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTtctccagcat
caaaacaaaagaggAATCCCACCTGTCAATCATCACATGACCAATAAGAA
CCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATTA
AACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGGA
GATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGATCTCATTGA
ACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACAGAGCA
CCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAAGCTCAT
CAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGTGAAAA
CAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGCCGAGA
GGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaatagaagGT
CGTCTTGACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATT
GGAAGTCTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCAA
GCAATGGAAACGGGACAGCAACAAGACGTGGTAGCAAAACGGAAACAATA
TCAACAACTGTCACGCGTGAATGTAAACTTGGTCATCAAATCAAAAAGTC
TGGGAACGAGTTTGTTGATAAATCATGTTATAATGATGACGGTGATTGCG
TGCCTGAAGGAATCATCAACCACCGGAGACAGGTATATCAATCTTCATGA
atgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGAT
GCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAATG
GAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCCA
AAGGAGAaGACATCTCAAACAGTCAACAAAATCAATATGGCGGACGAATT
GAGCTATATACAACAAATGAAAGAATCTGTAGTGCAGCGAGCGCATGTTT
TCAAAGAAGCAGAACAAGAATATAACAAGGAACAACAGAGTGAACTAAGG
GTGGCATCCACGAAGCTTCAAAAACAAAttatgaaagatgaaaaaattag
atTGAAGTCTAAACGTGAAGCTCCTCGATCAACTGAACCAGATTACATTG
CCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTtctccagcat
caaaacaaaagaggAATCCCACCTGTCAATCATCACATGACCAATAAGAA
CCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATTA
AACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGGA
GATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGATCTCATTGA
ACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACAGAGCA
CCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAAGCTCAT
CAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGTGAAAA
CAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGCCGAGA
GGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaatagaagGT
CGTCTTGACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATT
GGAAGTCTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCAA
GCAATGGAAACGGGACAGCAACAAGACGTGGTAGCAAAACGGAAACAATA
TCAACAACTGTCACGCGTGAATGTAAACTTGGTCATCAAATCAAAAAGTC
TGGGAACGAGTTTGTTGATAAATCATGTTATAATGATGACGGTGATTGCG
TGCCTGAAGGAATCATCAACCACCGGAGACAGGTATATCAATCTTCATGA
atgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGAT
GCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAATG
GAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCCA
AAGGAGAaGACATCTCAAACAGTCAACAAAATCAATATGGCGGACGAATT
GAGCTATATACAACAAATGAAAGAATCTGTAGTGCAGCGAGCGCATGTTT
TCAAAGAAGCAGAACAAGAATATAACAAGGAACAACAGAGTGAACTAAGG
GTGGCATCCACGAAGCTTCAAAAACAAAttatgaaagatgaaaaaattag
atTGAAGTCTAAACGTGAAGCTCCTCGATCAACTGAACCAGATTACATTG
CCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTtctccagcat
caaaacaaaagaggAATCCCACCTGTCAATCATCACATGACCAATAAGAA
CCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATTA
AACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGGA
GATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGATCTCATTGA
ACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACAGAGCA
CCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAAGCTCAT
CAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGTGAAAA
CAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGCCGAGA
GGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaatagaagGT
CGTCTTGACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATT
GGAAGTCTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCAA
GCAATGGAAACGGGACAGCAACAAGACGTGGTAGCAAAACGGAAACAATA
TCAACAACTGTCACGCGTGAATGTAAACTTGGTCATCAAATCAAAAAGTC
TGGGAACGAGTTTGTTGATAAATCATGTTATAATGATGACGGTGATTGCG
TGCCTGAAGGAATCATCAACCACCGGAGACAGGTATATCAATCTTCATGA
atgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGAT
GCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAATG
GAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCCA
AAGGAGAaGACATCTCAAACAGTCAACAAAATCAATATGGCGGACGAATT
GAGCTATATACAACAAATGAAAGAATCTGTAGTGCAGCGAGCGCATGTTT
TCAAAGAAGCAGAACAAGAATATAACAAGGAACAACAGAGTGAACTAAGG
GTGGCATCCACGAAGCTTCAAAAACAAAttatgaaagatgaaaaaattag
atTGAAGTCTAAACGTGAAGCTCCTCGATCAACTGAACCAGATTACATTG
CCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTtctccagcat
caaaacaaaagaggAATCCCACCTGTCAATCATCACATGACCAATAAGAA
CCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATTA
AACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGGA
GATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGATCTCATTGA
ACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACAGAGCA
CCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAAGCTCAT
CAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGTGAAAA
CAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGCCGAGA
GGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaatagaagGT
CGTCTTGACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATT
GGAAGTCTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCAA
GCAATGGAAACGGGACAGCAACAAGACGTGGTAGCAAAACGGAAACAATA
TCAACAACTGTCACGCGTGAATGTAAACTTGGTCATCAAATCAAAAAGTC
TGGGAACGAGTTTGTTGATAAATCATGTTATAATGATGACGGTGATTGCG
TGCCTGAAGGAATCATCAACCACCGGAGACAGGTATATCAATCTTCATGA
atgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGAT
GCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAATG
GAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCCA
AAGGAGAaGACATCTCAAACAGTCAACAAAATCAATATGGCGGACGAATT
GAGCTATATACAACAAATGAAAGAATCTGTAGTGCAGCGAGCGCATGTTT
TCAAAGAAGCAGAACAAGAATATAACAAGGAACAACAGAGTGAACTAAGG
GTGGCATCCACGAAGCTTCAAAAACAAAttatgaaagatgaaaaaattag
atTGAAGTCTAAACGTGAAGCTCCTCGATCAACTGAACCAGATTACATTG
CCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTtctccagcat
caaaacaaaagaggAATCCCACCTGTCAATCATCACATGACCAATAAGAA
CCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATTA
AACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGGA
GATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGATCTCATTGA
ACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACAGAGCA
CCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAAGCTCAT
CAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGTGAAAA
CAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGCCGAGA
GGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaatagaagGT
CGTCTTGACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATT
GGAAGTCTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCAA
GCAATGGAAACGGGACAGCAACAAGACGTGGTAGCAAAACGGAAACAATA
TCAACAACTGTCACGCGTGAATGTAAACTTGGTCATCAAATCAAAAAGTC
TGGGAACGAGTTTGTTGATAAATCATGTTATAATGATGACGGTGATTGCG
TGCCTGAAGGAATCATCAACCACCGGAGACAGGTATATCAATCTTCATGA
atgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGAT
GCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAATG
GAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCCA
AAGGAGAaGACATCTCAAACAGTCAACAAAATCAATATGGCGGACGAATT
GAGCTATATACAACAAATGAAAGAATCTGTAGTGCAGCGAGCGCATGTTT
TCAAAGAAGCAGAACAAGAATATAACAAGGAACAACAGAGTGAACTAAGG
GTGGCATCCACGAAGCTTCAAAAACAAAttatgaaagatgaaaaaattag
atTGAAGTCTAAACGTGAAGCTCCTCGATCAACTGAACCAGATTACATTG
CCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTtctccagcat
caaaacaaaagaggAATCCCACCTGTCAATCATCACATGACCAATAAGAA
CCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATTA
AACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGGA
GATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGATCTCATTGA
ACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACAGAGCA
CCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAAGCTCAT
CAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGTGAAAA
CAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGCCGAGA
GGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaatagaagGT
CGTCTTGACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATT
GGAAGTCTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCAA
GCAATGGAAACGGGACAGCAACAAGACGTGGTAGCAAAACGGAAACAATA
TCAACAACTGTCACGCGTGAATGTAAACTTGGTCATCAAATCAAAAAGTC
TGGGAACGAGTTTGTTGATAAATCATGTTATAATGATGACGGTGATTGCG
TGCCTGAAGGAATCATCAACCACCGGAGACAGGTATATCAATCTTCATGA
atgtctacGACAATCAAGGATAGTAGAGAACGTTCAGACTCATTGAAGAT
GCTGCAAAACTATGGTAAAAGTACCAACACTGTTACAAACGTTGTAAATG
GAGTTAAATTTGTTGGTAAAATCAAACTGATACAACAAGCAGAGAGCCCA
AAGGAGAaGACATCTCAAACAGTCAACAAAATCAATATGGCGGACGAATT
GAGCTATATACAACAAATGAAAGAATCTGTAGTGCAGCGAGCGCATGTTT
TCAAAGAAGCAGAACAAGAATATAACAAGGAACAACAGAGTGAACTAAGG
GTGGCATCCACGAAGCTTCAAAAACAAAttatgaaagatgaaaaaattag
atTGAAGTCTAAACGTGAAGCTCCTCGATCAACTGAACCAGATTACATTG
CCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTtctccagcat
caaaacaaaagaggAATCCCACCTGTCAATCATCACATGACCAATAAGAA
CCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATTA
AACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGGA
GATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGATCTCATTGA
ACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACAGAGCA
CCGCTTCTGATCTTTCTAAAATGAAAACGAGTGTATCAGTAGAAGCTCAT
CAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGTGAAAA
CAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGCCGAGA
GGAACGCCGTGAaatcaaaggaaaattatttttcatggaaaatagaagGT
CGTCTTGACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATT
GGAAGTCTCgaaactaaaaaagaaaattcttcaaCTGGAGAAAGAATCAA
GCAATGGAAACGGGACAGCAACAAGACGTGGTAGCAAAACGGAAACAATA
TCAACAACTGTCACGCGTGAATGTAAACTTGGTCATCAAATCAAAAAGTC
TGGGAACGAGTTTGTTGATAAATCATGTTATAATGATGACGGTGATTGCG
TGCCTGAAGGAATCATCAACCACCGGAGACAGGTATATCAATCTTCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008315XLOC_008315Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014845-exon-sc0000200-1491911889:41050..41458TCONS_00014845-exon-sc0000200-1491911889:41050..41458Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1510915933:41050..41458TCONS_00014845-exon-sc0000200-1510915933:41050..41458Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1575043694:41050..41458TCONS_00014845-exon-sc0000200-1575043694:41050..41458Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1491911889:41643..41772TCONS_00014845-exon-sc0000200-1491911889:41643..41772Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1510915933:41643..41772TCONS_00014845-exon-sc0000200-1510915933:41643..41772Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1575043694:41643..41772TCONS_00014845-exon-sc0000200-1575043694:41643..41772Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1491911889:42121..42202TCONS_00014845-exon-sc0000200-1491911889:42121..42202Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1510915933:42121..42202TCONS_00014845-exon-sc0000200-1510915933:42121..42202Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1575043694:42121..42202TCONS_00014845-exon-sc0000200-1575043694:42121..42202Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1491911889:42784..43041TCONS_00014845-exon-sc0000200-1491911889:42784..43041Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1510915933:42784..43041TCONS_00014845-exon-sc0000200-1510915933:42784..43041Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1575043694:42784..43041TCONS_00014845-exon-sc0000200-1575043694:42784..43041Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1491911889:43734..44003TCONS_00014845-exon-sc0000200-1491911889:43734..44003Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1510915933:43734..44003TCONS_00014845-exon-sc0000200-1510915933:43734..44003Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1575043694:43734..44003TCONS_00014845-exon-sc0000200-1575043694:43734..44003Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1491911889:44142..44268TCONS_00014845-exon-sc0000200-1491911889:44142..44268Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1510915933:44142..44268TCONS_00014845-exon-sc0000200-1510915933:44142..44268Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1575043694:44142..44268TCONS_00014845-exon-sc0000200-1575043694:44142..44268Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1491911889:44590..44746TCONS_00014845-exon-sc0000200-1491911889:44590..44746Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1510915933:44590..44746TCONS_00014845-exon-sc0000200-1510915933:44590..44746Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1575043694:44590..44746TCONS_00014845-exon-sc0000200-1575043694:44590..44746Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1491911889:45578..45994TCONS_00014845-exon-sc0000200-1491911889:45578..45994Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1510915933:45578..45994TCONS_00014845-exon-sc0000200-1510915933:45578..45994Clytia hemisphaericaexon
TCONS_00014845-exon-sc0000200-1575043694:45578..45994TCONS_00014845-exon-sc0000200-1575043694:45578..45994Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014845-proteinTCONS_00014845-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000200supercontigsc0000200:41050..45994 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.6462	37.0918	101.434	70.5572	0.513058	0.395665	0.194887	0.496504	0.202733	1.91725	0.153493	0.20405	0.0293699	0	0.0124093	0.0552976	0.115842	0.1165	0.0230294	0.0482397	0.379804	0.128161	85.241	69.6196	0.0939186	0.227979	4.29955	6.09607	59.1416	67.8661
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014845 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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