TCONS_00014836 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014836
Unique NameTCONS_00014836
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014836 ID=TCONS_00014836|Name=TCONS_00014836|organism=Clytia hemisphaerica|type=transcript|length=292bp
CCACGCGAGTGGTATTTTAGCTCTCCCGCCTCTCGTACCTCCCTGTGTca
caacaaaggaaatataccatattacatccctgtctcatgcgAGTGTGCGA
GTGATGTTTTGCTTTCCTATctccctgtctcacaacgaaggaaATACACA
TCATGTCCTTGTCggaatacacattacatctCTGTCTTGTGCGAGTGGGA
TTTTTTACTTTCTCATCACTTTTGTCTTAATGACGCGACTTAGAATACCG
CTATTATTACCTTAAGTCGATTAATTTTTGCATGTACTTTTT
Run BLAST on NCBI

transcript from alignment at sc0000198:399985..400276

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014836 ID=TCONS_00014836|Name=TCONS_00014836|organism=Clytia hemisphaerica|type=transcript|length=292bp|location=Sequence derived from alignment at sc0000198:399985..400276 (Clytia hemisphaerica)
AAAAAGTACATGCAAAAATTAATCGACTTAAGGTAATAATAGCGGTATTC
TAAGTCGCGTCATTAAGACAAAAGTGATGAGAAAGTAAAAAATCCCACTC
GCACAAGACAGagatgtaatgtgtattccGACAAGGACATGATGTGTATt
tccttcgttgtgagacagggagATAGGAAAGCAAAACATCACTCGCACAC
TcgcatgagacagggatgtaatatggtatatttcctttgttgtgACACAG
GGAGGTACGAGAGGCGGGAGAGCTAAAATACCACTCGCGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008306XLOC_008306Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014836-exon-sc0000198-1491911889:399985..400276TCONS_00014836-exon-sc0000198-1491911889:399985..400276Clytia hemisphaericaexon
TCONS_00014836-exon-sc0000198-1510915933:399985..400276TCONS_00014836-exon-sc0000198-1510915933:399985..400276Clytia hemisphaericaexon
TCONS_00014836-exon-sc0000198-1575043694:399985..400276TCONS_00014836-exon-sc0000198-1575043694:399985..400276Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:399985..400276 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.09828	0	5.1157	3.64807	4.44597	5.22794	6.78972	3.6825	3.34438	1.92172	5.61124	3.49339	3.56435	3.80208	3.35978	5.16952	4.12508	5.06783	1.59674	6.08795	3.22572	3.13855	0.488487	3.88378	3.79533	3.48731	1.75255	0.623456	0	2.71245
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014836 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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