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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014827 ID=TCONS_00014827|Name=TCONS_00014827|organism=Clytia hemisphaerica|type=transcript|length=1464bp
cattttttttctgtaaGGCACTCCAAACAATATTCaagctgaataaagtc
taacaAATTCAAATATGTTTCcttttaaattttccaaaacaaaCTCATTG
AGAATTGGATGATTTTCTTTCATTCCACTTGATACAAAAATATGAAGCTT
GCTATTAAATGTGTTGGCTGTGAAAAATACTCCAGATCCTGCCTTGACgg
caaaaaaatgatttttgattgtAACGGTTGCATCTTCGTTGTTGTATTTG
TTCATAGCATCACAGTTTCCTAGATTACTCAAACTGGTCATCGGAGgaaa
tttatcaaacaaatatGGCCTAAGTTCACCCTTCTCAATTATCACATAAC
CCATTTCAAATTGATCAATCACAGGATTTGGTGAATTATATTGCTTGATT
GATGCCATCAATTCATCTGCCTTTTTAAAGATTGATTCTTCATTGTCTAT
TGGTACAGCTTTCATTATCTTAGCAGTTCCAATATGGACATAATTTCCCA
TTGGCATTCTAACAGGTTCATTGAGGTGCTCATTAAATTTTCTAAGATCA
ACTGGAAACATCATTTGGCCATTTCCAATCTTTGTATTGAACCTTTTATT
GACCTCATTGATAGCATTATacatcaaaatcatcaatatACTGTGTACTG
TTTTTCCTTTAGCCTTGCATGCACTAATGAATTCTTTAGTTGACTGTTCA
TCAATAACTAAGGACTTGTAATGCTTATGTAAAGGTATAGGTGTAGACTC
ACCAAAGAGTGATCGATATAGATAAAGTGACCAAGATATTATATTACCAA
TCAGGCGAAAGTGAAAAGGAATTGTTGGTCTATTTGCCAAGATGAGTTCT
TCTTCAGAAAATCCATTCAGAATCTGTTCTTGTGCCTTTGCAAAATATAA
AGGTTTGTACTTAAGAATATCTCCATTTAATAAAGGAAGAACTTGATTAA
AAATTAGATTAGCATCAAACTTTGCATCACATATAACATGTGATAAAACA
GTCACAAGCATATATGAGAATATTTTGTTTCCTTTTGCAGGAATTTTCAG
CAAAGCAACTTTCCATAGTGGACCTTTTTTATAGTCAAATTTGGTCTCAA
TCAATTCCGGAATCAATTTTTCACAGTCTTCCCATCTATCAAGGGAGATC
TCATCAATTAACATCCAATCAGATAATAAAAATGTTGGATccattggctg
aaaaaaataacttttgcctTCAAAGCGTATACACGCTTGCATAAGGTAAT
TTAATTTGCTAACTTCTGTAAATACATCAGATAAATGTTGATAGCTGATC
TCAGCTTGTGATTCCAAAACATCTATACCCAAGTATATACCAGCACCCAT
CAAATTTGACACTAACATGTTATGCTCCATGTGACCAAGACGACGATGCA
TTGATTTGCTTTCAATGGATTCCATTTCAAACTTATCCTGAAAATTAGTG
AAGGTAGGAATGTT Run BLAST on NCBI protein sequence of TCONS_00014827-protein >TCONS_00014827-protein ID=TCONS_00014827-protein|Name=TCONS_00014827-protein|organism=Clytia hemisphaerica|type=polypeptide|length=476bp
NIPTFTNFQDKFEMESIESKSMHRRLGHMEHNMLVSNLMGAGIYLGIDVL
ESQAEISYQHLSDVFTEVSKLNYLMQACIRFEGKSYFFQPMDPTFLLSDW
MLIDEISLDRWEDCEKLIPELIETKFDYKKGPLWKVALLKIPAKGNKIFS
YMLVTVLSHVICDAKFDANLIFNQVLPLLNGDILKYKPLYFAKAQEQILN
GFSEEELILANRPTIPFHFRLIGNIISWSLYLYRSLFGESTPIPLHKHYK
SLVIDEQSTKEFISACKAKGKTVHSILMILMYNAINEVNKRFNTKIGNGQ
MMFPVDLRKFNEHLNEPVRMPMGNYVHIGTAKIMKAVPIDNEESIFKKAD
ELMASIKQYNSPNPVIDQFEMGYVIIEKGELRPYLFDKFPPMTSLSNLGN
CDAMNKYNNEDATVTIKNHFFAVKAGSGVFFTANTFNSKLHIFVSSGMKE
NHPILNEFVLENLKGNIFEFVRLYSA Run BLAST on NCBI transcript from alignment at sc0000198:149747..151210 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014827 ID=TCONS_00014827|Name=TCONS_00014827|organism=Clytia hemisphaerica|type=transcript|length=1464bp|location=Sequence derived from alignment at sc0000198:149747..151210 (Clytia hemisphaerica)
AACATTCCTACCTTCACTAATTTTCAGGATAAGTTTGAAATGGAATCCAT
TGAAAGCAAATCAATGCATCGTCGTCTTGGTCACATGGAGCATAACATGT
TAGTGTCAAATTTGATGGGTGCTGGTATATACTTGGGTATAGATGTTTTG
GAATCACAAGCTGAGATCAGCTATCAACATTTATCTGATGTATTTACAGA
AGTTAGCAAATTAAATTACCTTATGCAAGCGTGTATACGCTTTGAaggca
aaagttatttttttcagccaatggATCCAACATTTTTATTATCTGATTGG
ATGTTAATTGATGAGATCTCCCTTGATAGATGGGAAGACTGTGAAAAATT
GATTCCGGAATTGATTGAGACCAAATTTGACTATAAAAAAGGTCCACTAT
GGAAAGTTGCTTTGCTGAAAATTCCTGCAAAAGGAAACAAAATATTCTCA
TATATGCTTGTGACTGTTTTATCACATGTTATATGTGATGCAAAGTTTGA
TGCTAATCTAATTTTTAATCAAGTTCTTCCTTTATTAAATGGAGATATTC
TTAAGTACAAACCTTTATATTTTGCAAAGGCACAAGAACAGATTCTGAAT
GGATTTTCTGAAGAAGAACTCATCTTGGCAAATAGACCAACAATTCCTTT
TCACTTTCGCCTGATTGGTAATATAATATCTTGGTCACTTTATCTATATC
GATCACTCTTTGGTGAGTCTACACCTATACCTTTACATAAGCATTACAAG
TCCTTAGTTATTGATGAACAGTCAACTAAAGAATTCATTAGTGCATGCAA
GGCTAAAGGAAAAACAGTACACAGTatattgatgattttgatgtATAATG
CTATCAATGAGGTCAATAAAAGGTTCAATACAAAGATTGGAAATGGCCAA
ATGATGTTTCCAGTTGATCTTAGAAAATTTAATGAGCACCTCAATGAACC
TGTTAGAATGCCAATGGGAAATTATGTCCATATTGGAACTGCTAAGATAA
TGAAAGCTGTACCAATAGACAATGAAGAATCAATCTTTAAAAAGGCAGAT
GAATTGATGGCATCAATCAAGCAATATAATTCACCAAATCCTGTGATTGA
TCAATTTGAAATGGGTTATGTGATAATTGAGAAGGGTGAACTTAGGCCat
atttgtttgataaatttcCTCCGATGACCAGTTTGAGTAATCTAGGAAAC
TGTGATGCTATGAACAAATACAACAACGAAGATGCAACCGTTacaatcaa
aaatcatttttttgccGTCAAGGCAGGATCTGGAGTATTTTTCACAGCCA
ACACATTTAATAGCAAGCTTCATATTTTTGTATCAAGTGGAATGAAAGAA
AATCATCCAATTCTCAATGAGtttgttttggaaaatttaaaagGAAACAT
ATTTGAATTtgttagactttattcagcttGAATATTGTTTGGAGTGCCtt
acagaaaaaaaatg Coding sequence (CDS) from alignment at sc0000198:149747..151210 >TCONS_00014827 ID=TCONS_00014827|Name=TCONS_00014827|organism=Clytia hemisphaerica|type=CDS|length=1431bp|location=Sequence derived from alignment at sc0000198:149747..151210 (Clytia hemisphaerica)
AACATTCCTACCTTCACTAATTTTCAGGATAAGTTTGAAATGGAATCCAT
TGAAAGCAAATCAATGCATCGTCGTCTTGGTCACATGGAGCATAACATGT
TAGTGTCAAATTTGATGGGTGCTGGTATATACTTGGGTATAGATGTTTTG
GAATCACAAGCTGAGATCAGCTATCAACATTTATCTGATGTATTTACAGA
AGTTAGCAAATTAAATTACCTTATGCAAGCGTGTATACGCTTTGAaggca
aaagttatttttttcagccaatggATCCAACATTTTTATTATCTGATTGG
ATGTTAATTGATGAGATCTCCCTTGATAGATGGGAAGACTGTGAAAAATT
GATTCCGGAATTGATTGAGACCAAATTTGACTATAAAAAAGGTCCACTAT
GGAAAGTTGCTTTGCTGAAAATTCCTGCAAAAGGAAACAAAATATTCTCA
TATATGCTTGTGACTGTTTTATCACATGTTATATGTGATGCAAAGTTTGA
TGCTAATCTAATTTTTAATCAAGTTCTTCCTTTATTAAATGGAGATATTC
TTAAGTACAAACCTTTATATTTTGCAAAGGCACAAGAACAGATTCTGAAT
GGATTTTCTGAAGAAGAACTCATCTTGGCAAATAGACCAACAATTCCTTT
TCACTTTCGCCTGATTGGTAATATAATATCTTGGTCACTTTATCTATATC
GATCACTCTTTGGTGAGTCTACACCTATACCTTTACATAAGCATTACAAG
TCCTTAGTTATTGATGAACAGTCAACTAAAGAATTCATTAGTGCATGCAA
GGCTAAAGGAAAAACAGTACACAGTatattgatgattttgatgtATAATG
CTATCAATGAGGTCAATAAAAGGTTCAATACAAAGATTGGAAATGGCCAA
ATGATGTTTCCAGTTGATCTTAGAAAATTTAATGAGCACCTCAATGAACC
TGTTAGAATGCCAATGGGAAATTATGTCCATATTGGAACTGCTAAGATAA
TGAAAGCTGTACCAATAGACAATGAAGAATCAATCTTTAAAAAGGCAGAT
GAATTGATGGCATCAATCAAGCAATATAATTCACCAAATCCTGTGATTGA
TCAATTTGAAATGGGTTATGTGATAATTGAGAAGGGTGAACTTAGGCCat
atttgtttgataaatttcCTCCGATGACCAGTTTGAGTAATCTAGGAAAC
TGTGATGCTATGAACAAATACAACAACGAAGATGCAACCGTTacaatcaa
aaatcatttttttgccGTCAAGGCAGGATCTGGAGTATTTTTCACAGCCA
ACACATTTAATAGCAAGCTTCATATTTTTGTATCAAGTGGAATGAAAGAA
AATCATCCAATTCTCAATGAGtttgttttggaaaatttaaaagGAAACAT
ATTTGAATTtgttagactttattcagcttGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014827-exon-sc0000198-1491911889:149747..151210 | TCONS_00014827-exon-sc0000198-1491911889:149747..151210 | Clytia hemisphaerica | exon |
| TCONS_00014827-exon-sc0000198-1510915933:149747..151210 | TCONS_00014827-exon-sc0000198-1510915933:149747..151210 | Clytia hemisphaerica | exon |
| TCONS_00014827-exon-sc0000198-1575043694:149747..151210 | TCONS_00014827-exon-sc0000198-1575043694:149747..151210 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000198 | supercontig | sc0000198:149747..151210 . |
Blast
The following BLAST results are available for this feature:
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