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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014813 ID=TCONS_00014813|Name=TCONS_00014813|organism=Clytia hemisphaerica|type=transcript|length=1960bp
GTCATATTTTCTAAGTAAACCGTATTTTTCCGTATCAAGGACAACCATCA
CATCCTGGTCAAAGTCCACCTGGATAATTGTGTATGTCATTTGAACTCGT
TGAAGTCACTTCCCACGGTTCAATAGTGGAACGGTATAAAAAGCTGACAA
ATTTCGTGATCTGATTCCTTTACTTCGTACTGCAGAGAATAAGAGATCGA
TAACGAGAGAAGAAGACAAGAGACGAACGGAAACCAACAGCAATTTCCAA
AGCATTAAAGGATCGTTAATATTTATAATCGTGTTTTATAACAAAACGCA
ATCAATATGCCTGTCATTGATCACTTCGTGAAACAGCACTTCGCGTCTAC
ACACGTCAACAGCAAGGAGAAAGAATCAAGTATCTTAGACGGGATCACAT
CTTCACCTCTCTTTACAGCTAAGCAACCAAAGCATCATCAAGAACAAGTA
AAAACAACCATGGAGAAAGAAATCTTTGAACAAGTACACAGTCTACGACG
CACAATGGAAGGCAGAGTTGACTTCGAAAAGAAGAGTGTCTTTTTGAGTG
AGTTAGACCATGGAACAAGTGACATTTTACGATGCAAACGTATCATCGTC
ATCGGGTCAGGATCATCACATCACGTCGCAATCTCAACTCGACAATTAAT
GGAAGAAATGGTCGAGTTACCCGTATTCATCGAGTTGGCGAGTGATTTCC
TCGACCGTGAAGTGCCGATCTTCCGTAACGATGTTTGCATCTTTTTGAGT
CAGTCAGGAGAAACAACAAATGTCGTTGAATCATGCCGATACTGTCTTCA
ACACGAAGCTCTCACGATTGCCGTCACAAATACAGCTGATAGCACCTTGG
CTAAAATGTCGAACTTTGTTTTGGACATTAACGCCGGTAAAGAACATGGG
ATCACAAGCACCAAGACGTACACAAGTCAATTCATGGCTATGACCCTTAT
CTCTTTACACTTAGCATACGACAAACGTCCCAAAGCAGAACGTATCGAAT
CAATCGTTGAAGAAATGCAACATTTACCCGATAAAATCGCTACAGTGTTG
GAAGCTACCGAAAAATACCGTAAAACAGCTCTCTCTATGAAAGACGAGGA
GAGTATACTCGTCATGGGCCGCGGCTACCAACAAGGTACCTGCCATGAag
gatctttcaaattcaaggAGGTAACAGGCACCCACTCGGAGGGTATCCAC
TCTGGTGAATTAAAGCATGGACCATTAGCTTTGATCGACGATCAAATCCC
GATTATAATGATCGTAATGAGAGATAACATTTATGATAAATGTTGCAACG
CCATTCAACAGGTGAAAGCAAGGGGCGGCCGCCCTGTGCTTATTTGCGAA
AACGAAGATACTGAAACACGTAAATGGGCGGATGTTGTTTTAGGTGTTCC
AAAGACTATTGACTGTTTAGCTGGTATTTTAACTGTGATTCCTTTACAGT
TATTATCTGTGTATTTAGCAGAATCCATGAACAAGAATGTCGATCAACCA
CCAGCTCTGGTGAAGACGGTGGTTGAGAAATTCATTCCCAATAACAGAAT
GAGTTAAATCTTTTgtgttattttgtttttgtaatttattgttttatatc
atttttattattatttgacTTTTCGCACATGTTTTCATTGTGTTTTGTTA
TTGTCATCTAAGTTGCATTTTGAACATGTCTTTTCAGCAATAAACTGAGC
TGAGTCTGAGCCAACGCTTCAAGATTTTTTACAGNaccaggtggtcgaaa
cttaacaaataaccaaCGCTTCAAGATTTTTTACAATGCATTTGTAGAAA
AGCCAAAGTAAACTTCAAGTCTAAAGCGACTAAAATGttcagaaattaaa
atttgtaTATCAAACAGTTGTAAATATACGATATTCCATATACAAAATAT
GAATAcagtttttgtaatttttcaaaatttttgaagcgaaatatacaagg
aaaaaagtta Run BLAST on NCBI transcript from alignment at sc0000198:323276..329523- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014813 ID=TCONS_00014813|Name=TCONS_00014813|organism=Clytia hemisphaerica|type=transcript|length=6248bp|location=Sequence derived from alignment at sc0000198:323276..329523- (Clytia hemisphaerica)
GTCATATTTTCTAAGTAAACCGTATTTTTCCGTATCAAGGACAACCATCA
CATCCTGGTCAAAGTCCACCTGGATAATTGTGTATGTCATTTGAACTCGT
TGAAGTCACTTCCCACGGTTCAATAGTGGAACGGTATAAAAAGCTGACAA
ATTTCGTGATCTGATTCCTTTACTTCGTACTGCAGAGAATAAGGTAAGAG
ATTTATTATTTTCTGGTGGCTTTATGAGTCGATCGTCTCGTGTTAGCGTG
AATAGCGATATGCATTTGTACTTTAAAAGACGGCGGAGTGACTGAAACGA
TTTGGAAAACCCACAGTTTGACCCGCAAAATCGAGGACGGTAAACGTGCT
GATTTACCTTCGTCCTCAGTCATTTGGGATCTAAACATATCAGAAGCCCT
AATACATAGATACATAAAGACATACATACATAAACTCGCTAATGTAAAAA
GCGCGGATGTTTGCCTGTACAGAGACTTCACATATGATTGTGTGGACAGT
GTTAACTAGATATAAAATAAGTACAGGCGGACAAGGGCGCATTTTAATTC
TGCTTTCAAAGCGGGATTTTCAATCATTGTTTATTATCAATTTGGGTTTT
CTGATTCATGACGTAATGTTTTCTACGGAAAGACCCCGGTTTTTGCAAGT
AGTGGAAAATTTTATACTTTTGTCTAGTTTAAATTTACAACTACTGCCAA
AAACCGGGGTCTTTCCGTAGAAAACATTGCGTCACGAATATCATGAATCT
GCAAATTCAAAGTTAAGGTAATACATCAACGATCATCAAAATAATGACAC
AAATCTCCTTGCGAAACAGGGAGAATTTCCAAAGAAAAATCAAAATAAAT
GAAAAAGATTAATGAGTAATACTTTAAGGAGATAGGTATTACTCAAGACT
GGGTCACAAGATTTAAAAGCTAAGCTGAGTGGATATTTAGCTAAGAGGAG
TTTTAAGGGTTGATAAAACATGAGAAAAGGAGGTGTTGCTGTATGGTAAA
CTTGTTTTGCTTGTGAGAAGAGGACAAGAGGTGTCATGTTTTATGATGGG
TCGACATTCGTGCACCAGCAGAGGTAATATAATGTTAACATGATAGTTTT
ATAATGTTTACTTACATATTATGTTTATTATGACGTCAATAACGTGTGGT
AAGCAAAGTCTGTCAGAAAAACAGTGTCAATAGAATCTTTCCACTGACAT
TTCATAACTTTTAGTACCCTTTTCAAAGAGAAAAACCTACTGACTTGATA
CTTTTATATACTACTCGGAGACAAATGTGGTGAGTTAAAAGTTTGTTATT
TTGTGTAGAGAAGGATTGAAAAATAAAATCTCTCCAGTGACATTTCACAA
TATGCATAACTTTTAGAATATGGAATTACACCGTCTCAGATTGAAGTCTA
ATTAGCCATTTTCACGGCCCGCTCAGCGCGATGCAAATTTGCTTTAATGG
GACGCGATTTTCACAATGGTGGTATTTCCAATGGCGGGAGCTGCTGTTTC
TGGTAATTATGGTTGACCAATCTGATGAAAGATGTTCGTTGTCGTTGTAA
AATTATGTCAAGTTTCTCTCGACCAGCTGTCATCATTGCGGAAAATAGCA
GAAGTAGGTCGTTGTATGGATGGGAAAAAAACGAAAAAAAAGGAAGGAAC
AGCTGGATTTAACAATAACCAAACTACAGATTTGACAAATAATTAGAGAA
AGAAAGACAGATAAGTACTAGTCAAGTTAAACGTTAGCGCCCAGTTGATG
TGTCGGTTAATTTCAAATAAAGTTAAAGATAATGCTTATGTCTTGACCAT
GAGATAAAGAGATACCAGAGACAGATAAAGAGATAAGAACACTTCCTGAT
TGACAAATTTTATATTGTTTTGATCTTTTCTTTATAATGTCACTTTGTTA
CAATAAAATGATCGGTCTCGACATCAGGAGTTGCTAATTGATCCATCAGT
CACGCAAATACAGCAAAGCATTTGGATAATCACGCATCCCTTTGAAAAAG
TCCAAATCACGCATCACGGCTCAAAAATCTTTTAAATCACGTGATCACGC
TAGAAAAAAGTCCTTATCACACCATCACGAAAACTGCTTTGGGGGCCTCA
TCTGGAAAAGGGTTAGAAGGGGTCCCGTTGTGGTACAAGCAGGACACAAA
AAACAGCTGCTGTTATAACCAGTAAAGGTGGAAGACTACATGCAATGGTC
TGTTATAAACAGCAAAAGAAGGTTAGAAGGATATTAGAAAGTGATACAAA
AACAACCTGTTCGGCTTACACAGCTGCAACTTTTTAGCCTCGCTAACGTA
AAATATAAATAGGTTTCGCAGTTCCAGTGTTTAAGGCGGATAACTGGGAT
CATATATTGCCATTTGTGAAATTTTGCTGGATTTGCAGCTTTCGATAGAG
GTAGAAGCCATCGATGGTCACTTCTGAAAGAGGATGTTAAACATTGGCCA
AGTGATACGTAATAGGAAATGATGGAAAAGAAAAAGGGAAAATTTTCACT
TAATGATGCAAACAAAAAATGACGAGAATTGTTAAGATTCCAAAAACAGC
TCATCAGTACGCGAAGGACCATCAAAGAACAGGTTTATATCAACAGGTCT
GACTTTTCTAAATCGCGTGCTCAAAGCCACGAAAAAGGACGCTTGACAGT
TTATCGATAGTGATGATAACCTAAGGGGTAATTTTAAGATGTCATAAAGT
TTTTGCAAGTGCAAAGTGTGCTTTTGCAACCGTTTCCTTGTTCAGTCTAC
TTTAATTACATTAATCTTCGCGAGAATTAATTTCGCGTTTTCGCGAATAT
TTGCCTTTTTCGCTGAAATAACACTAGCGAAATCACGTGAAATTTCTGAC
TCACGAAGTTAAATCCAAGTGTTTTTTGGCTTAAAATATTATGTAGATTT
GCTATTAGTGATAAAAACAGGCAGTTAAAGGGTAATTTTTCGATTCATTT
TTGGTTGATTAGCAAAATCAAATGATCTACGCGATATTTTTCGAAATCCT
GAATCGCGAAAATGAATCCATTTTTGTGCTCGCGAAAATTAATCCGATTA
AAGTTTTCAGATCATATCGAAGCGATGTAATGCTGTGATATTTTGGAGGT
TTGATGAAATCTCAGTTGTTTGATAAGTCAACACAGTTTTGTTAGTATGT
CAACAACACTATATCCGGCCTGAACTCATTTTTCTTTTCTCAAGTGAGAC
TTGTGTTTATTTTCTGGTCTAAAGTACTTCAGTTTCCTTTTAAAGGAATC
AGGTTGAAGAGGATCTCTATAAAAGCTGGAGTGTTCGATCATTAGCAATA
TTAGTTGTTTATTTGTCATCGTGCTTGTAGTTTGAAGGAAGATACTCATT
TTAAAGCTAGGTAAGCAGTTCCTTACACCATTCGTTTACTTTCTTATGAC
ATATAGCTGCTGAGTGTTAAGAGTTAGTACTTACTTGACTTTCGGTGTAG
TCTGTAAGTAAGGACATTCCGGTTAGAGGAGAGAAGATTCGCCATCTACT
GCAGACACAACGTTCATACCTAATTAATGACTGGCACAAAGATCATATCA
GCTAGCTTTCAGCCTGGGCTTTCGGCGAACACAGTCAAACAAAGCTTCGA
AAGCTCTTTATCTTTTATATCGAAAACTATTGGAGACTATGTATAATTTG
TGTGCAAATCGAGTTATTCTCGGCGAAGTGAAGGCAGTTTTTTAAAGTCA
CTTTTTATTGATGAGAATGTTATAATTACTACTATTCTATTCCTGGACAT
CCGAAGTAACCTCAATTGTATAATACCAGTTTTAGAAGTTATTTTAGACG
CAGTGATTATCTTTCAAAATAAATCTAACTTGAGCGGTCATCAGTTCTTA
GCAAAACACATGTTGATTATGAATGTTAATTGAGTTTATACAGCTCGTAT
ATAACTCTATTTCAACGTTCACTGATATCAGGTGATTATATGCTTCCCTA
GCGTTTTGTACTGGCTAGGGAAACCGACTAGATTCTAATGTTTTAAGTTT
TACTGGGCATCTTTTTACATTCGACACTGTAATATATTACGAAAATACTT
TGTCAATCAATCATCTTTTTATTATTGAGTACGTCATAAATCAATAAAAC
TATTTCTCAATTCCTCGTGAGATTCACTTACTAATGATCAGTTTTTCGCA
AAAAAATGTCAAAAACAATAATTTATAGACGATGAAACTGTTGGGTGCGT
CAACTAAGAAACTCTCCAATTTAATTATAGACGGAAATCTAATATAGGAC
TCAAATTATAAAAGGAAAAAATGTATCGCATTTTTTGTTATATTTAAATG
CCTGTCTTACATAATTGAAATCTAATGATCAAAATAATATCCTGTTAATG
ATTAACTTGATCGCTGATTGGTTCATTAGAAAGGAAAGTAGCCAATCATT
GGGCTTGCTTTTGATATTGTAATTGATGATTTCAGAAACATTTAAATAAT
TTGAAATTGTTTCCTTTTTTCTTTATAACAGAGATCGATAACGAGAGAAG
AAGACAAGAGACGAACGGAAACCAACAGCAATTTCCAAAGCATTAAAGGA
TCGTTAATATTTATAATCGTGTTTTATAACAAAACGCAATCAATATGCCT
GTCATTGATCACTTCGTGAAACAGCACTTCGCGTCTACACACGTCAACAG
CAAGGAGAAAGAATCAAGTATCTTAGACGGGATCACATCTTCACCTCTCT
TTACAGCTAAGCAACCAAAGCATCATCAAGAACAAGTAAAAACAACCATG
GAGAAAGAAATCTTTGAACAAGTACACAGTCTACGACGCACAATGGAAGG
CAGAGTTGACTTCGAAAAGAAGAGTGTCTTTTTGAGTGAGTTAGACCATG
GAACAAGTGACATTTTACGATGCAAACGTATCATCGTCATCGGGTCAGGA
TCATCACATCACGTCGCAATCTCAACTCGACAATTAATGGAAGAAATGGT
CGAGTTACCCGTATTCATCGAGTTGGCGAGTGATTTCCTCGACCGTGAAG
TGCCGATCTTCCGTAACGATGTTTGCATCTTTTTGAGTCAGTCAGGAGAA
ACAACAAATGTCGTTGAATCATGCCGATACTGTCTTCAACACGAAGCTCT
CACGATTGCCGTCACAAATACAGCTGATAGCACCTTGGCTAAAATGTCGA
ACTTTGTTTTGGACATTAACGCCGGTAAAGAACATGGGATCACAAGCACC
AAGACGTACACAAGTCAATTCATGGCTATGACCCTTATCTCTTTACACTT
AGCATACGACAAACGTCCCAAAGCAGAACGTATCGAATCAATCGTTGAAG
AAATGCAACATTTACCCGATAAAATCGCTACAGTGTTGGAAGCTACCGAA
AAATACCGTAAAACAGCTCTCTCTATGAAAGACGAGGAGAGTATACTCGT
CATGGGCCGCGGCTACCAACAAGGTACCTGCCATGAAGGATCTTTCAAAT
TCAAGGAGGTAACAGGCACCCACTCGGAGGGTATCCACTCTGGTGAATTA
AAGCATGGACCATTAGCTTTGATCGACGATCAAATCCCGATTATAATGAT
CGTAATGAGAGATAACATTTATGATAAATGTTGCAACGCCATTCAACAGG
TGAAAGCAAGGGGCGGCCGCCCTGTGCTTATTTGCGAAAACGAAGATACT
GAAACACGTAAATGGGCGGATGTTGTTTTAGGTGTTCCAAAGACTATTGA
CTGTTTAGCTGGTATTTTAACTGTGATTCCTTTACAGTTATTATCTGTGT
ATTTAGCAGAATCCATGAACAAGAATGTCGATCAACCACCAGCTCTGGTG
AAGACGGTGGTTGAGAAATTCATTCCCAATAACAGAATGAGTTAAATCTT
TTGTGTTATTTTGTTTTTGTAATTTATTGTTTTATATCATTTTTATTATT
ATTTGACTTTTCGCACATGTTTTCATTGTGTTTTGTTATTGTCATCTAAG
TTGCATTTTGAACATGTCTTTTCAGCAATAAACTGAGCTGAGTCTGAGCC
AACGCTTCAAGATTTTTTACAGNACCAGGTGGTCGAAACTTAACAAATAA
CCAACGCTTCAAGATTTTTTACAATGCATTTGTAGAAAAGCCAAAGTAAA
CTTCAAGTCTAAAGCGACTAAAATGTTCAGAAATTAAAATTTGTATATCA
AACAGTTGTAAATATACGATATTCCATATACAAAATATGAATACAGTTTT
TGTAATTTTTCAAAATTTTTGAAGCGAAATATACAAGGAAAAAAGTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014813-exon-sc0000198-1575043694:329331..329523 | TCONS_00014813-exon-sc0000198-1575043694:329331..329523 | Clytia hemisphaerica | exon |
| TCONS_00014813-exon-sc0000198-1575043694:323276..325042 | TCONS_00014813-exon-sc0000198-1575043694:323276..325042 | Clytia hemisphaerica | exon |
| TCONS_00014813-exon-sc0000198-1510915933:329331..329523 | TCONS_00014813-exon-sc0000198-1510915933:329331..329523 | Clytia hemisphaerica | exon |
| TCONS_00014813-exon-sc0000198-1510915933:323276..325042 | TCONS_00014813-exon-sc0000198-1510915933:323276..325042 | Clytia hemisphaerica | exon |
| TCONS_00014813-exon-sc0000198-1491911889:329331..329523 | TCONS_00014813-exon-sc0000198-1491911889:329331..329523 | Clytia hemisphaerica | exon |
| TCONS_00014813-exon-sc0000198-1491911889:323276..325042 | TCONS_00014813-exon-sc0000198-1491911889:323276..325042 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000198 | supercontig | sc0000198:323276..329523 - |
Blast
BLAST of TCONS_00014813 vs. Swiss-Prot (Human)
Match: GFPT2 (Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 OS=Homo sapiens GN=GFPT2 PE=1 SV=3) HSP 1 Score: 378.637 bits (971), Expect = 8.761e-121 Identity = 180/354 (50.85%), Postives = 248/354 (70.06%), Query Frame = 1
Query: 460 MEKEIFEQVHSLRRTMEGRVDFEKKSVFLSELDHGTSDILRCKRIIVIGSGSSHHVAISTRQLMEEMVELPVFIELASDFLDREVPIFRNDVCIFLSQSGETTNVVESCRYCLQHEALTIAVTNTADSTLAKMSNFVLDINAGKEHGITSTKTYTSQFMAMTLISLHLAYDKRPKAERIESIVEEMQHLPDKIATVLEATEKYRKTALSMKDEESILVMGRGYQQGTCHEGSFKFKEVTGTHSEGIHSGELKHGPLALIDDQIPIIMIVMRDNIYDKCCNAIQQVKARGGRPVLICENEDTETRKWADVVLGVPKTIDCLAGILTVIPLQLLSVYLAESMNKNVDQPPALVKTV 1521
M+KEIFEQ S+ TM GRV+FE +V L L +I RC+R+IVIG G+S+H A++TRQ++EE+ ELPV +ELASDFLDR P+FR+DVC F+SQSGET + + + RYC ALT+ VTNT S++++ ++ + INAG E G+ STK YTSQF+++ + L ++ D+ R + I+ ++ LP+ I VL EK AL + + S+LVMGRGY TC EG+ K KE+T HSEGI +GELKHGPLALID Q+P+IM++M+D + KC NA+QQV AR GRP+++C +DTE+ K+A + +P T+DCL GIL+VIPLQLLS +LA +VD P L K+V
Sbjct: 326 MQKEIFEQPESVFNTMRGRVNFETNTVLLGGLKDHLKEIRRCRRLIVIGCGTSYHAAVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADTLLALRYCKDRGALTVGVTNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFISLVMFGLMMSEDRISLQNRRQEIIRGLRSLPELIKEVLSLEEKIHDLALELYTQRSLLVMGRGYNYATCLEGALKIKEITYMHSEGILAGELKHGPLALIDKQMPVIMVIMKDPCFAKCQNALQQVTARQGRPIILCSKDDTESSKFAYKTIELPHTVDCLQGILSVIPLQLLSFHLAVLRGYDVDFPRNLAKSV 679
The following BLAST results are available for this feature:
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