TCONS_00014764 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00014764
Unique Name	TCONS_00014764
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2637

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000198:156868..173631+

transcript sequence

>TCONS_00014764 ID=TCONS_00014764|Name=TCONS_00014764|organism=Clytia hemisphaerica|type=transcript|length=2637bp
TTTTAGAACTAATTGAGAAGATCATACTAGATAACATAACATAATAACAA
TACAAATTCCAACATGGCTACAGCAGACCAACAACGATCACTTAAAGATG
CAATGGAAAGAGCTAAACAgatTGCTGCAAAACTTCAAGCGCAGCAGGCA
GCAGGACTTCCGTTAGAAGAAACACGTAAGAGGAGCTTGGCAGATGatgA
CCAGTCAGAATCACCAATGAATAAAATGGCATTTGTTCCTCCTATGGGTG
GACCAATTGACCCATCGGATCCAAAATCCATAGCTCAACAAGTAGCTAAT
AGTCTTGTGCAAAGGGCTGGTTTTGGTTCAATGCTCGTGGAAGAAGTAAT
GATTCCAAATAAACTTGTTGGGTTAGTTATTGGTCGTGGTGGTGAAATGA
TCAACAAACTTCAATCAGAATCAGGAGCAAAGATACAAGTTGCTACTGAT
CCACCACCAGAGATAGCAGCGATGCAAACAGAACGTCAAGTCACCATCAC
AGGAATGGCTGATAATGTCAACAAAGCCAAAAGTCTTATTGACGAGATTC
GATCCGAAGGAAAAGTTCCTGAAAGACTTCTTAgtggaggaggaggagga
gccAGCGAATATTCAACGGAAATGTTGATTCCTTCAACAAAAGTTGGATT
AGTTATCGGAAAAGGTGGAGAAACGATCAAAAGTCTCCAGGAACGAGCTG
GTTGTAAAATGGTCCTCTTCCAAGATGGAGAATATCAACAGTCCAACGAA
AAACCCTTACGCATTAGTGGAGAACACAACAAAGTCATGTATGGTAAACA
ATTAGTTCAAGACTTACTCACTCAAAAAGAACTTGAGGCTATGGGAAAAG
ACTCAAATCAAGGGATGCAAAAGACCCAAGATGGACACATTTATGAAGAG
TTTCAAGTCCCTCGTGAAGCGGTTGGTTTTGTCATCGGCACCAGAGGTTC
AAGCATTAACAACATACAACAACAGACAGGATGCAAAGTTCAATTCAAAA
ATGAAATGGAAGGAGATTTCAAGATCGCCATGTTGAATGGAACACCACAA
CAAGTACAGGCTGCAAAAGATGCTCTCGTCGAATGCATACAGAGCCATTC
TGAGAGGAAGAATGacggtggtggtggtggtggtggtggcaGAAATCAAA
GTTGGGGTGGTAATCGAGGAGGTGGATGGAATGGTCCTGATGGGCGTAAT
GGAGGGCCAAGAGGTTATCGTGATCAAGGGCGGAATACTGGTGGTGGGCG
CCATCAACAATTACCACCCGGTCATAAACACGTCTGTGTTGACGTGCCTT
CAAATAAATGTGGTCTTATCATTGGTAAAGGTGGCGAAACTTTGAAATTC
ATCCACCAAGATACCAAAGTCTTTATCGAGATTGAACGAAATTCACCTCC
AGATGCACCAACACGAGTTTTCCATCTCAAAGGTACGGATGAAATGATCG
AAATGGCGCTCCACGAAATGAGGGATAAGATCAATGATCAGAACATCTGC
GCCAGACCATTCATGCCACAAGGAGGCGGACCTGGCTGGGGTGGCCCAGG
AGGTCCTGGGGGACCTGGAGGATGGGGTAACCAAGGTTGGAATCAAGGAG
GAGGCTGGAACCAGGGTGGTGGTTGGAATCAACCCCAAGGAGGATGGGGA
CAAGGTGGATGGAACCAAGGAGGATGGAATCAACAGCAAGGAGGATGGGG
GCAACCTCAACAAGGAGGATGGGGACAACAACCCTACCAACAGCAGCAAT
GGGGACAGCAATCGAGCGCTCCCAACACTTCAACGACTACCACCACACCC
ACAGCCAACCCAGCAACAGGACAACCCGATTACAGTGCAGCATGGGCGCA
ATATTATCAACAACAGCAGATGTATTACCAACAATATCAATCTACCGCCG
CCTCAAGCTCAACTACAACGACCACGACCGCCTCATCTGCTTCAGGTGGA
GCTCAAAGCCAATCGATGGAAGAGTACCAGAAGAAACTAGCCGAGTATTA
CAAGCAATACGGACAAGGGGAGGCTGCCAAACCGGAAAAATAAACGGGAA
TGTGAAGTGATTGAATGGGAACTGTCGAAAAAGAATGACTGGTAAAATTG
TGAGGCTGCAAAGGTGAAATGGTTtaagctttcaaaaaaattaactcgcc
aaataaaatgGATTATGACTGCGTCATGAGCAGCTGACAAACGATCGTTG
GAAAGACATCGAAATCAAACTTATTTCATAATATATgtactctttaactc
gaacaagttttatcgtcccttcagttaacaatgccttatacatgtttttt
ggacctaccccggtggaggtcctataaattaacctgtgtttgttcgtccg
ttcgtccgtccgttagtctgttaccaacttttctcaggattgaatcatag
gaatcttttgatttttggtacaaaggtgcaaaatggtggtggccaaaatg
tgacggagcccgattttcgaaaaaaaaattttttgggccaatttgggcta
aaaaacgggttttttagattttgtgaaaaattgggtcattgattttttct
gattttttgtatgaaagtagggtaccatcataggtaaaagatggctcaag
cagatttttgcaaaaaaattttgttggctcaaaaaac

Run BLAST on NCBI

transcript from alignment at sc0000198:156868..173631+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00014764 ID=TCONS_00014764|Name=TCONS_00014764|organism=Clytia hemisphaerica|type=transcript|length=16764bp|location=Sequence derived from alignment at sc0000198:156868..173631+ (Clytia hemisphaerica)
TTTTAGAACTAATTGAGAAGATCATACTAGATAACATAACATAATAACAA
TACAAATTCCAACATGGCTACAGCAGACCAACAACGATCACTTAAAGATG
CAATGGAAAGAGCTAAACAggtgtatattttttatttaaatctgAAATCC
attgaaaagttaaactaaGCCTAAAGATAATATAATTTTGCATTGTGATC
TATTcactgtgttttttttcttctagatTGCTGCAAAACTTCAAGCGCAG
CAGGCAGCAGGACTTCCGTTAGAAGGTATGCTTAAATTCTATCCAAATGA
TCAAATGAAGCAAAATACACAAGGTCGCATTCTTTATTTAAACCCTAATT
AAAAGTGAGCTTAGTAACCCTAGTAAAGTTGAAAACATCTCTCGTAGAag
tattcaaatttttactggTATATGTAAGATTGTGACATCTGGTcacctag
aagataagaacaccaATTTCTAAAAAGTGCTTTTCAAACTGATTTTGAAT
ACAGGGTGTCTTAAAAAGTCTTGTGTCAGACCACTTCTATAAGTAGACAA
GTTTTGGTGTATGACAGTTTTTTTTGAATGCAATATTaaataattaaaac
ttgattATTTACAAATCACAATAATGCACTTATGAAACACAAAATGTGAA
AACATATGTGAATAGACATATCAACTTAATGCAACATAATCCAAAAATAa
tccgaaaatatttttttaaagatcgTCTCGTATCAAGTAATTAAAAAGAA
TACTACCTTATTGTACACAAATAAGCAGACATGTAATTAACACAAATTAG
GAAATTTTGTATTGATTGAAACCCCTtcaattaaaaccagccgtggtgtc
catgaaaaagcaaataaaatttgtgttaatATTTTGCGTGTTATTTCGTA
ATTTCAAGGCAGTTAATTATGTGTCTACTTATTTTTGGTATTAAGAAGGG
TATTTAGATTTTGTGATACAcaaacaatgttttttcttatagaagttata
gACTTACACTTATAGAAGTGGTCTAACACAGGACttcgggacacactgta
tatatCTAGATCTTATAAGATCCTTTCACATCTATAACAATAACATATGA
ATGTCATTGATTTTTAGAAACACGTAAGAGGAGCTTGGCAGATGGTAAGT
CATAAAGTCATTTGAAAGACTATTTGATATGTCTTTCTGGACAATATTAC
TCCTGGGTACCTAGTGGACAGGAACTTGACTAGACAGATGGTTTTAAAGG
AAGTGCCAAGAAAAATAGTTGAGGGGTTTGAAATAAGAATCAATGTCACA
TGTGAAAGGTTTTAAGAGAAAAATTAATGTGATGATGATacttttttaga
aacttttaatAAGAGTactttgaaatgttttaaattacattcaagcattt
taagtatttttctttcagatgACCAGTCAGAATCACCAATGAATAAAATG
GCATTTGTTCCTCCTATGGGTGGACCAAGTAAGTATTCTAAACTGCCTAT
ATCTTATTTCTTCAACAACATACTAAGTAGTACCCTAACAAATAGTTTGT
GGGCAgccagtcaaaaaaaaaaacacacaacaTTTTAAAGTTCAGCCTAA
GATGGTTGACAATATTTGCATGGTatttgttttttgatgaaaaaaattac
ttgTAAATATGTCTTTTTCACTATCACTCTTTCATCCCTTTTTTAGTTGA
CCCATCGGATCCAAAATCCATAGCTCAACAAGTAGCTAATAGTCTTGTGC
AAAGGTAAAATCCATAAATTCTGTAAATTCTGCCTtatttgaaataaaca
aaattgaTTCAGCTACATCACAGGCAACTCTTGATTATCATGGTAATTGC
GAAATGAGTCGCAACAATGtaacgttttttttctttgcaactTTCATTAA
GGGCTGGTTTTGGTTCAATGCTCGTGGAAGAAGTAATGATTCCAAATAAA
CTTGTTGGGTTAGGTATGTgatctaatttttattatttcaaatcaatttc
catttttatttaAACATTTGCTATTTATTGCTCAGACCATTTTTCatgat
ttaacttttttagaaTTCTGAGAAAAAAGCCTATTTTATGGATAACAATT
GGAAAACTGCTCTTTGGCTTATAGTGGTCGTTGGTTGCCCTTCTTGAATA
TATTATGcccttttgttttgatattgtgATATTAATGATAAGAAATTCAA
GCTCTGGCGAAATCTGCATGTGACTTCGTCATTCAAATGACCAATAGTTC
AATATAAAAATTAGTACCATACAAAATCAATAGTTTCAAGTTATCAATAG
TATAAACTTTTATCTTTGATATTGAGATTAGGCACTTTTCATACAGAGGA
ATAATCAATATTTCATATAACAAAAAGACCAATCTCacataaagaaatta
ttataaatttaCCAAGACACTtgttttgagattgaacctttcgTCATGTG
AACGACGTAGCGATCTTCTAATATAAATTGTTTTCCAGTTATTGGTCGTG
GTGGTGAAATGATCAACAAACTTCAATCAGAATCAGGAGCAAAGATACAA
GTTGCTACTGGTAAAGTTCTTGTTGTTTCAAAACTCATTCAGTTAATGTT
AGAAATATGTAAGGCTGGACTTTGGTCTGCCATCACCTGACCTGAGATAG
TGCCTGATAGAGGTTTTGATttggagagaaaaaaaatcttctttgaaatA
GCAATAGAATTATTTGGGTCAGCAGATTTTGACTTAGGGTCGGCCAGGTG
ACGGTGAACCAACATTTCAGACTAATAACATACTCTTTTGATTATCAACC
CACAAAAACATGAACAATGATAGAGGTGATAAAGGATGCCTTTCTTAATT
AGTAGTATAATAATATATTTTCAATTCTGTGTGTGAAAATAACcaccaaa
ataataaaaataacaattagAAAATTTACTTAGATTTTGTTTGTATTTCG
ATACATCTTCTTTCATTTGTAGATCCACCACCAGAGATAGCAGCGATGCA
AACAGAACGTCAAGTCACCATCACAGGAATGGCTGATAATGTCAAGTACG
TTAGCTAAAAAACATATTAATGTTTTACATAATTCAATAACCAGCAACTC
AGTTCTCTCTTAGTAGAAGTAGGGGGGCCAATCTTTATGATTCGTAGCAT
CTGTCCTTGGACTCGACTGCATGTGATTGTTTTGAAAGTAGATAGGATTC
TGAAACTTTTAGAAAGGGGGCCCGCGGATTAGGCCTGGCAAAAATTTTAA
TGTCCAAAGATCTGATAGAAAGNAAGGGGGCCCGCGGATTAGGCCTGGCA
AAAATTTTAATGTCCAAAAATCTGATAGAAAgtatgatttcaaaaaaatc
aacagGAAAAAACTCAAGTCAAAATGTAAATGAAGtcaaatcttttcatt
ttaGCAAAGCCAAAAGTCTTATTGACGAGATTCGATCCGAAGGAAAAGTT
CCTGAAAGACTTGTAAGTTTGCAAGTTTCCTTTTAATGATGTATGTGATA
AACAACTATATATAATAACTGATTTTGTGCGTTTCTATCTCGCATTTATT
ATGGTATTACAGTTAGCACTTCAAAGGAATATGAATTATTTCTCTTACTT
TTTTCATTTAGCTTAgtggaggaggaggaggagccAGCGAATATTCAACG
GAAATGTTGATTCCTTCAACAAAAGTTGGATTAGTTATCGGTAAGTTAAC
AATAACAACCTCcaaaaacattgttaaaagcaacatttttttcattaatt
ctGCCCAAATTTTACTACCTAAAGTGGTAGTATGTCTAGCCAGCTTtgga
aatttgtttttcttgtttgcaCAAAACGCATTGTCTTGCATATTGGGGTA
GTCTTTTGCTGAAAACGTTTTAATAATTAGACATACAATTTCATTATTGA
ATAATTTCTTTTCCAGGAAAAGGTGGAGAAACGATCAAAAGTCTCCAGGA
ACGAGCTGGTTGTAAAATGGTCCTCTTCCAAGATGGAGAATATCAACAGT
CCAACGAAAAACCCTTACGCATTAGTGGAGAACACAACAAAGTCATGGTA
CGCTGATTTCCTCCTCCTTCCTCCACAGACTTGATAATTTTTCTTGCACA
AGCCTAGTGTTTTAACAAGTGTTCTTTTCGTTTTGCTGATCAAGTGAAAA
AAGCAAGTTCtcatgaaaaaatacttttcctCATAGCCAGATTCTCATCC
CAGCCGGGCTTAAGTTTTAATAATTGTGTTCCTAAGTTTAGGCGAAATGT
ATtacatgaaaaaaataactatCATAACCTTCTTTTTTTCTAGTATGGTA
AACAATTAGTTCAAGACTTACTCACTCAAAAAGAACTTGAGGTCAGTCTT
TCATGTTTAATATTCTTTCACAATCTGTACAAACAcgatttagttttttt
taaggttagagaaaatcattttttacaatagcgcaccgcgctgaatctaa
aaatatattttatttttgacatcattactctcgatgtgtttgtatgagtt
ccaatcccatcaacctttgcgttaatctctttcacacgttaaatttcatc
attaaaaaaaaagatgtataacaacttgcacgtatctttaattgagccgc
attgtattgtgggattgcaactcgtacaaatgtcaaaaaaagtgaaaagt
gataattatgacgtatgcgttgcggagcgctattaaCTTGAAGATTTTTC
TCTTCTAGATCCACCCGACTTTGTATAATTAAAGTGATATAGTGGACCCG
GTTTGAGGTGTTAAAAGCCTTGGAATAAGTCAAAATAACATCCTTAACTC
NCTAGATCCACCCGACTTTGTATAATTAAAGTGATATAGTGGACCCGGTT
TGAGGTGTTAAAAGCCTTGGAATAAGTCAAAATAACATCCTTAACTCTTT
TCTAGGCTATGGGAAAAGACTCAAATCAAGGGATGCAAAAGACCCAAGAT
GGACACATTTATGAAGAGGTATAAATTGAATAATAGCAAACCCAAGAAAT
ACCACTTATAGTGTAGGGGGCCAATCCTTATGAACGTAGCATCATCTTGG
GACTCAATTGaaactcaaattttgaaacctttttataGGGGTTTGCGGAT
CAGTGTCTGTCGGTCTATGGCCAAAAAACTGACGTTGTAGTCAAATCTCA
TAACCTTGAAAATGAGCAACAAATTGACTACAttaaactctttttttata
agcatatgggAAAATCGGGTCGAGGCTCAATTACTCTGTACCAAGAGTGt
ttctcacgtttatcgcttcgttgtacactctgtgcgcatttttctgtttg
ataaaaaaattcccgtatgGAGACCCTCTGTGatgaaatatgatttttaa
ataGCAACAATactctcatcgtctcccctctctcgcCAACACCCCATCGC
Aaaggtcggtttgaaaaatatcaaatgagaaaagataatgacaacagacc
ctctacggcaatgaattttgccTGTGTACAGACAAAGGCTCCATATGCTT
AGCAAAACCTCATTTTCAGCTTTGATTAATGCTTACATATTATTCTTAGA
CTTTGATTTGTTGATTTCTTTTGggttcatgaaaatttcgaaatcttAAG
TCAGAACATTGATTCGGCTCAAAGaattaaagttttctttgtaatttggc
gTCACAGGCGAAAATATTTGGTCTAAGAAAGcacaaacagctttaaaagt
aaccctaCAAAGGTTTTAGAAAAGCTACACGATTTTTTTGTATTGCAGCT
TGGGGGTGTATTTAgtattatgcttattttttactgCATTTGAGCCttag
tatgcttataaacgttatgcttatagaaaaatgaGTGAATTTGCGAAAAA
GATGATGCCTTCTTTTAACACTCACATTTTGCTCGTTAGTTTCAAGTCCC
TCGTGAAGCGGTTGGTTTTGTCATCGGCACCAGAGGTTCAAGCATTAACA
ACATACAACAACAGACAGGATGCAAAGTTCAATTCAAAAGTAAGGAAATT
GTTTACTAGCTCTCTTGGCCGTAGCACAGATGTCGCTCACTTGATGTCTC
TCTACTTGATGTTCAGCAAATAAAGAGAAGGGTCAAGTGGAAAGTTGTAG
CACCCTCCTCTTCCGTTTCTAAGTCAGTGCTTTAAGTACGTGGTCGATGC
TTGCTATACGGTAGGGTCAAGCTTATCATTCAAAGATTATATTTTACAAT
ACTAAAGTCTCTTTCTGGTTCGGCTGTCTTTTTGTGGAAACCAAAGAGGC
CTAAGTGCACTCTGTATAATTATGGGTAATTAAAACAATTTAGCTTTAAT
CGTACATTATTTTCAATGCAAATAGGACCATTTTCTCTCTAAAGTTCAAA
AGCAAACTTATTTTACCAAGCAGGGATACTTATCTCCAATTAAGTAAGAG
TTCTGAGGTCTAACAGCTGGAGATTTTTTATTCTCATTTGGTGACGGCTT
TTTTTCGTCTTAGATGAAATGGAAGGAGATTTCAAGATCGCCATGTTGAA
TGGAACACCACAACAAGTACAGGCTGCAAAAGATGCTCTCGTCGAATGCA
TACAGAGCGTATGACTTTATTATCTATTATTGTCCAATAAGGTTGCAATA
CATGAAGAAATTTTGTAGCCAAGTAAATCTATTTAAGGGACATTGAATTT
GATTAAGTtgtaaatattcttttttctgTAAACTATGTTAGACGAGAATC
ATCAAAATCagaactgtaatttttttggatCTCCTAAACCATTTACTGTT
TAGGTATCActtgattatttttatttttctcaataGCATTCTGAGAGGAA
GAATGacggtggtggtggtggtggtggtggcaGAAATCAAGTAAGAGTTT
GGTTGCTTTTTCATTTACTGTCCCACACTTTTCAAACGAACGAAGCTTTT
CTGTTTTTACTAGTCAGGAAGTAAGAAGAAGCATAATTGTAATAGCCACT
TTCCTTTTCATTTAAATACtttaaacataaaattttaaattaatagCAAT
ATTGACTAATTGTTAAACTAGAGTAAGTATGAACGAATATGTTAAAATAA
AGACTAAATATAAACTAACGGTCTTTGCCTGGATACCATGTGAATTGAAA
GTAAGAGCAGCCGAGGGATTATTGTTAAATAGGCCGCCCTATCTTACTTG
TGTATACTTACATGAACAGTGCCGTTGTGAAATAAAACacaattaaataa
taaatataaaagTTACGAGAACCTGGTATCTAGGATATCGCTGCTTTCGA
AAGTATGAGTTTTATTgtttattcattcatttattcattcattcatttgt
ttattcattcgttcatttgtttattcatttattcattcattcattcattc
gtttaACTCGACCCATAGCTAAACGGATGGTATTAATTTAGCGTTTCATT
TTCACCGTCTATCGGGGATCTTCATCAGCTGTTATCACATCACTGAACTT
TGGTGGCTTTTTGCACTGATGGCGGTTTTTTATCAGTGCGAAGGTTGGGG
AATCCAGGTTAACACCTGTTAGCAATCTCAAACCCAAGACAGTGTTCTGG
CTTTTTGACTTTCGGCGATCTTATTGATGTTATTATATGTTGAAATCTAT
TAACTTATTCATACGTCATTCTATAGCAATATTGGATTCCGTCAAGTACT
TAGTCATCTCTATCTCTATGTGTGACATACTGGACAGGTGGTATCAATTC
GGCATTTTCACTTTCACCATCCATAGGGGAATCATCATCagctgatttta
cgtcactgaAAGCTACCATTGGGACTGTGGGCATTGACGGTGATttcttt
attgttttgtttgaaGAGTCTAGGTTGAAATCTGTATGCAAGTTCAAAGA
CATGACACTTTTTCTTCCTTCCGAAGGCTCCTTGGTGTTAGACTTCTTAG
AATGATCGATTTCATCATATCTGGTTGTTTTGAACCTGTTAACAAAGCTG
TATTCCCTGGGTACTAATTCAATAGTGCTTACTGGTTCAACCTGGAATCT
GGAACTGCCGGTGTTAAATCCAAGAACCTTTTTCATATGGTTCAACCCAC
TAGCCGGTTTATTAACCAGACGATTGGTTACAGCTGTGTACTCATTATCT
TCTTCAATACCTTTGATTAAATAACTCAATTCCTTTGCAACTTTTTGACC
CTTGGCTCCCTGAatagtttctttgtttttgagatCGATGTTTCTCAACC
GACTGTAATCTTGAATCAAGCTTTCCTCGATAGCATTTCTCTCAATCCCA
TTATATCTGTGCAAAATTTGTCGAGTTTCTTTCAAATCCTTTTTCCAAGA
GCTTGTGATGGCAGTTGCGGTCTTTGGAGCAATTTCTTTGATCCTCAGCA
TAGCAACACCCATCATGAATATAACGGTAATGTTTATACGTGTTAGCGCC
AAGCTCATCCCTCCTAAACTGCCAAGGTGACGAGCATCAAAGTGAATAAT
TAACTGCGACGATTGATCAGGTGTTACATTCTTAGTGCTGTTTACGAGTG
CAAAGGCCCACAACATCCCAGCATTTACAGCAGGACAAAGCAAGGAAGCC
GATACTACAGCACCAATTAATGATTTCATGTTTCCTTGAAGGAGCGATAA
AGCAACTGCTACACCCGATGGTATTGCAACAATTAAACCAACTATTAGAC
CCCTTGGTTCACCTCTAGATTGCATTTCAACAGTAACTTTGTCCGAAATT
CCAGTTAAGTAAGCTATCAAACCAATTAAGAAACCAGTAAAAAGACAAAG
TGCTAAGCCAATTAATTCGTTGATAATTGCACGCTTCCAAATTATTTTGC
TTTGTAAAACTAAACCAAACGTACCACCCATGATAGGTCCCATGATTGGT
GATACTAACATACTTGCGACCAAAAGAACGGTACTGTTTTCTAGAAATCC
AATAGCTGATATAGTGCTTGCTACTATTAACAACATAATGTAATCGAAAG
TCAATTTTGACCCAATTTTGACTGACTTTACCACTTGTGCAACATTCATT
CTTGATTTGAGACTTTTACGGAATTCGTTCATATCATCAGGaattttatt
ctctttttccACAGCTGTTGGAAAGTGGATGTTGATGGGAATAATACTAA
CAGAGGAGTATTTATTATTCCCTATCCCTGCATCCAGAAGCGCATTTAAA
AGGCTGTCAGCTTTATCTTCGTCGAGCACAAATAGAATTTTCCAGCTATC
ACTATTTGTATTCCTTAAACATGTAGCATCGATTTTCAATTCCAAGTTAT
TTATAATTGCCTCAAATCTTATAAACCTTATAAATCTAATATTTGAGGAC
AGAATTCTGCTTTGCATTCTAGTGTCGCTTTGTATCTTCTCGAATTGTGA
CCCTTGAGGAAGTTGTCTCTTCATTGGTCTCTTGTTCGTGTTCGGTCACT
ATTTCGTGGTCTTCTTCTTCAAGAGGGAGTGtaacaataaacaaaacaac
agACATTTTCAATGTTAGTGATTTTTTTAGTACAGCTCTAAATGAGATGA
AGAAGAAATGAAATGATTAAACAAGGGCAGAGTTAGTTTGAATTTGCAAA
AAGATATACTTAAAAAGACTAAGATTCAATCAAATGTCGGCTGagtgtaa
aaaaattattcgTGTCCTCTCTCAACTCAAGTAAAGATAAAGCAAGCCTT
ACTCATAGGCTTATGCTTCccattaaaaactttttttgagatCGTTAAAT
AGTCAATATAAGATTGTACTTATTAAGAACTGCTGACTCGCAATATTAAA
AGGGGACAAAATCACTGTGTAAATTACCTCAATAATGATAATGTCTTTCA
ATGGTCAAAGACATACATTGTTAGGTTGTCATAcacctttttttgataag
aaaCAGTAAATTTTTGACGATGCGTTTTAAGCCTCATATTGTTTTTTCAT
ATTCTTTTTAGAGCAAAATTGAGATATGTTAGGCTCCGTGTCCAGACCTT
GATCCTTTAAAACTGCTGGAAATTCAGCTATTCCAACTGTCCCTTTCGTT
CTTAAACTGTTCTTTTTTTGTGGTGATTGGAATCtccatgttcttataaa
ataactttAGTAAAAggagtactcttaggtgccaaataaacgcccccccc
cccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNccaaccccccccccccccgtttatttggc
acctaagaatAGTTATCTATTGATTCCACGTTCAGGAAAATGAAGGATAG
TGAAGGGATAAAAATGACGAGGACTTTAAGAATGTCTATTTAAATGATCA
ACACTCAAAATGAAAGTTCATTCAAAATTTCCCAGTGCACATTCAGCATT
AGATAGTACTTTCAAACGTGAGAATAACCATAATACCTTAgactatttat
atttatatatatagAGCATGCATAACGGAATAAATGCAAGTAGATATATA
ATAAGGTTATACTTCCTGTTTTGAGTGCTCTGAGAATAAAGAATCAAAAT
CAATTACACTGAATAAGAATATTCTTAAGGTAATAAGTGTGTACGTCTTT
GTCTGatataattttctttgaaaaatttaagaaaaaacctCATCTTTTTT
GTTAGAGTTGGGGTGGTAATCGAGGAGGTGGATGGAATGGTCCTGATGGG
CGTAATGGAGGGCCAAGAGGTTATCGTGATCAAGGGCGGAATACTGGTGG
TGGGCGCCATCAACAATTACCACCCGGTCATAAACACGTCTGTGTTGACG
TGCCTTCAAATAAATGTGGTCTTATCATTGGTAAAGGTAGGTGTTTCAAG
GGAACTATTTTTTACGGACTGGATGtatgaaataattgattttgCGGAAC
TTATTCTCACGGTTGACACTCTTAACCACGAAAATTAGCCCCCTAAGGTT
CTGGTGTCAAGAATATTTACTTCATCATACTAGAAATATGtgataataaa
taaaaatatgaatGGGCTTAAAAATTAAATGATAATTTCGAGAGTTCGTA
TCTTTCGGTGCATTGTTTCACATAAAACGTACTGAtgaggattttttttt
aaatcattattCCGTATCGCAGGTGGCGAAACTTTGAAATTCATCCACCA
AGATACCAAAGTCTTTATCGAGATTGAACGAAATTCACCTCCAGATGCAC
CAACACGAGTTTTCCATCTCAAAGGTACCTTTTATCTCTCCAATACACCC
TAAAATatattgtttctttttcttttgttttacagCGTACCCTCACTTAA
GTTGAAACACCCACCAACTAAAAAACGCGCAAAACTTTTAAGATACTCCA
ATATATGTGTGAAGCGATCGTTTTGGACTCCCTGCTTTGGCAATAAAGAA
AGCCCAATTTCTTCGATAAATAAAGAAATAAGTGCAGTTTTCGCAAAGTA
CGATAACtctctttgaaaattttctgtATCGTATAATTCTTGAACCGTTT
CTTTTACGATAACAGGTACGGATGAAATGATCGAAATGGCGCTCCACGAA
ATGAGGGATAAGATCAATGATCAGGTAAAGTTATTCAAGCAAGATGCCAC
CAAATCAAAAATGCTCTTTTTAACAAGGATTGTTCAGCAAATGATCTTTC
AAGTGTGGTTTCTCAAGTGGGATAAAGCCTATCAACACCACGAGGGTGAA
GAACATTGTCAATCTTAGTTCATCACCGGTTATCCCTTTTTAAATTACAT
GTTTTAGTTTGATTAAAAGGAATAATCAGTAAAGTCGAGACAGGTCGAGA
AATGACGATTTAAAATCTTAATCTTAAATTTTAAATGCTTAGaatcaaaa
aaaacttataaCTTTATTATCACGACTATGGAAAAAAGTTTGACAAAAAG
GTTTGGAggttttgctcaatttttttctcGTTCTTTTGCAACATATATTT
TTCTGTTTGCAGAACATCTGCGCCAGACCATTCATGCCACAAGGAGGCGG
ACCGTAAGTCGTCTTCTAAATCTACCCCAATCAATCTTCTTTAATTGAAA
GCCCCTCCCTGTACATTCTACATGTCAAAATTGCAGTGGCTTGATAAGGA
TGGTTGGACGTTTATTTGCGAGTTTCTCgagttttctttttattatttaa
ttCCCAGTAAATTTGAGATAATATTGAAAAGGTAAGCAGAAAACGGAAAA
TTCAACGACAAAATGCttcatttggaaattttttttttcatctcccAGCA
TTTTTCGTTCGATATCTGCatattttgtataattttatacatttttttct
gTTATAGTGGCTGGGGTGGCCCAGGAGGTCCTGGGGGACCTGGAGGATGG
GGTAACCAAGGTTGGAATCAAGGAGGAGGCTGGAACCAGGGTGGTGGTTG
GAATCAACCCCAAGGAGGATGGGGACAAGGTGGATGGAACCAAGGAGGAT
GGAATCAACAGCAAGGAGGATGGGGGCAACCTCAACAAGGAGGATGGGGA
CAACAACCCTACCAACAGCAGCAATGGGTAAGTAAGCTATTGCTGCCCGG
CCCTAAGTACCGTGTTGACTACCTCTAATTATGAAGCACTGTCATTTTTT
GTCCGCCTCAAAGGCAATGGTTCAAAACGATAACCTCGTCCGCATAATTT
GTTAACATCTGAAACCTCTATCTATCACTCGAATCAAGAAACCAAATTCT
CCTCTttataacaaagaaaaaattggcAATTAGTTGAATACGAAATTGTT
CTTAGTTTATCGAATGTTAAATTCAATTGCGTAAGCTGTATGTAGTTTGT
TCATTCGCCAACTATAAACTGCTTTTCGATGCACATTCTAGGGACAGCAA
TCGAGCGCTCCCAACACTTCAACGACTACCACCACACCCACAGCCAACCC
AGCAACAGGACAACCCGATTACAGTGCAGCATGGGCGCAATATTATCAAC
AACAGCAGATGTATTACCAACAATATCAATCTACCGCCGCCTCAAGCTCA
ACTACAACGACCACGACCGCCTCATCTGCTTCAGgtacattcttttgttt
tatattgTGATAGAGATTTTTTCGCTGGTTCAACAAATGGTTGACACCCA
CAAAGACTCTTTTCGATATCAAGATGGTTCAGGGTGTTTtaagtttgttt
aaaactgGTAGTGAAAGTTGATTCTGTTTGTTCCTGGTCCAAATCAAAAC
GTTCTGTCGGCAGCAACTATTAAATTCTCATTGATTATTTCATATGGATT
TGGGCATTTCTGTAACATAATCTGAGGGCTGTCTTTTCTGCCAGGGGTGG
CCACAACGTTGCATTAAACGAGGTACTTTTAGAGTAAAAGTTTGTAACAA
GTACTTTCCCTTAAAGAGGACATTTTTCACCATATTAACAGGTGGAGCTC
AAAGCCAATCGATGGAAGAGTACCAGAAGAAACTAGCCGAGTATTACAAG
CAATACGGACAAGGGGAGGCTGCCAAACCGGAAAAATAAACGGGAATGTG
AAGTGATTGAATGGGAACTGTCGAAAAAGGTGGGTTTATTTCTTTTGCTT
TGAAGTTTGGTACAGAATTGTATAGAAAAATGATTGAGGTTCTCTCTGAA
TAAGATTCAAGACTTTTCTGGACCTAATACGATTCAAACGCTGTCACGTT
TTTAGAGAGAATCtcgtatttttttctaaacaattttGTATTACATTTTA
TATTAACAGGTAAGTCTTTCCTTATTACAAAATTATCAAATTACTGTTGT
ATACTCTCTTGTacgttgttttgtttttcttactCTTGTTGTAGATATTA
TGAAGTTCATTCCACTGTATTATGCTGGTGTATTATACTACTATCTACTG
TTATATTGACTGCATTGATTCCACACTGTTATTACATACATATTACATAT
GATATTATGTCTGATATTACATGTGTTTCTATATTATCCTGTTACACTGC
ATTGTATGCTATTATAAAACTCATTACGCAGGAGGTTTGCTGGATCATGC
TATGGTGGTATTATGTGTATATAACTTTATGATCTCATTTTTTAAAGTAA
TATTTTGACCCAGCGGGTCGAAATATCGAAGGATTTTTACTTTTACTACA
Tattaaaatgagaaaattttaaacattgatttttcaaatatattttattc
tttctcttttttggaaatgaaaacCAAAACctattcaaaatttacaaaca
TTGGAGAACTTAGCTTCGATCTTTTGAATCCCTCTTTTTACTGTGATCCT
GCTATCTTGAAAACCTCTCTCGCTTGTAAAATTGGGCTTGGTTTTCATTT
TCCATATTTTGTGTAAGCTCGTTCTAAAGGAATtctgttcttaatttctt
ttGCTACAGAATGACTGGTAAAATTGTGAGGCTGCAAAGGTGAAATGGTT
taagctttcaaaaaaattaactcgccaaataaaatggtaacgGTATTACA
TTTTGAACTGAAAATTTACAAACTGTATTTGCTGAGAGGTTAAACAAGGA
TGGCACTTCTTAAAAAGAAGTCTTGTTTTGTCATCTACATATCAGaggaa
aaatttgaattccGGCCTTCCGATTCTTTACATTGAAGAGGCTTCTAATC
TAATCTAATTCTAATAATTTCCAAGCTGAAAACAAGTAATGAATAATAAC
CCTGAGAGTGATAACTTATTAGTGCGATGGAAATCACTTATTTTTATCTT
CTTCTTAGGCTTCCTTGTTTAACCTCGCATCTAAAATCTGTTGATTGTTA
TCCAAAACATTTGCTCTGTCCTATTTCACCTGCACGATAATTTTGAATTG
CTAGTCATTACCCTCACACCAAGTATTATagtgcatctttttgaaaatga
ttctTTAGTATTCCCTAATTATTATCACCTAGTTCGCATTTGAAATTCgc
attatcatttttcttttgaaaatgattcTTCGGTGTTGccttattatttt
tcatttttaacgtTGAATGACCTTATTGAATTGTCTATGTTGTGTGTTGT
TGTTTGTGTTTATTTATTTGAACGAGAAAGTAACATTGAGCAGGAACTGT
GTATTACAACGCTGGTCGGGCAATATGTGTGCTACGTCTTACTTTGGGAT
TACTGGATTTCCTTCATCTTGTCTACTGGCTTGCCTTGCACATCTACAAC
GTATGATAACTTAGACGGTTTATTTGTTGTTACCATCAAACAGCCTTTAT
ATAGTTGATGTTTATATTGAAAGTGTAATTGGTAAGTATATTATTTGCTT
CACTTTTTATGTCCGTACACTTCGAGGTTCTGTAATTTCTACCGCCCATT
GTAGATTGCAGTTATTGgtttaaataatgttttaatGATTctggtatttt
tgaaatttcacagATGATCAACTTGTTACAGAATTTTCAGACTACAACCA
AATATGTATTCTCGTTTTGAAGAGTTAATATCAATCACGCACAATGCGTT
TGTAAGAACAGTACAAGGTGTTTTTAAGTGTTTTTGGATGATAGGATGTA
GTCATCCATACAGTACGTACGCTAAATTTTCCAATTATTTGACACTCCtt
ttgtacgcagagaacattAAACTGACGACATGAAAACAATAgagtacgct
tttgctaaaaaGCTAACCTATAGGACTCTCTCTCTCTACTTAgtaaatgg
gctcttccagaaaatgtccttATATGGGGGGTGGAGAATATAATGTCCGT
GGGGTAGcggaaaatcatcaaaatttgcttgTATGGGGGTAAATTTTCTC
TGTCccggggtaatttgggttgtccggggggtcaactgatgcttgtccgg
ggggtgaAACCTGTTGCCCGGGAGCAAAagtcactgaaaattgttatatc
ctccactcccccctgatattcattttttttctggaaaagcccaatactaT
TCTTACAAGTGCACACTTGTGTACAGATTTATTTCAGGATTATGACTGCG
TCATGAGCAGCTGACAAACGATCGTTGGAAAGACATCGAAATCAAACTTA
TTTCATAATATATgtactctttaactcgaacaagttttatcgtcccttca
gttaacaatgccttatacatgttttttggacctaccccggtggaggtcct
ataaattaacctgtgtttgttcgtccgttcgtccgtccgttagtctgtta
ccaacttttctcaggattgaatcataggaatcttttgatttttggtacaa
aggtgcaaaatggtggtggccaaaatgtgacggagcccgattttcgaaaa
aaaaattttttgggccaatttgggctaaaaaacgggttttttagattttg
tgaaaaattgggtcattgattttttctgattttttgtatgaaagtagggt
accatcataggtaaaagatggctcaagcagatttttgcaaaaaaattttg
ttggctcaaaaaac

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_008265	XLOC_008265	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000198	supercontig	sc0000198:156868..173631 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
84.9302	93.3524	169.875	152.055	97.5533	90.0838	57.4668	69.5552	68.3919	84.5187	67.9137	67.6576	78.1863	88.7175	87.7652	96.8413	101.013	97.0719	26.3503	29.4252	65.8441	62.2333	48.1528	57.6938	86.4665	77.4866	43.9601	43.0906	41.4951	38.8045

Blast

[Close]

BLAST of TCONS_00014764 vs. Swiss-Prot (Human)
Match: FUBP3 (Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 2.169e-53
Identity = 139/402 (34.58%), Postives = 213/402 (52.99%), Query Frame = 1

Query:  328 SMLVEEVMIPNKLVGLVIGRGGEMINKLQSESGAKIQVATDPPPEIAAMQTERQVTITGMADNVNKAKSLIDEIRSEGKVPERLLSGGGG----GASEYSTEMLIPSTKVGLVIGKGGETIKSLQERAGCKMVLFQDGEYQQSNEKPLRISGEHNKVMYGKQLVQDLLTQK---ELEAMGKDSNQGMQKTQDGHIYEEFQVPREAVGFVIGTRGSSINNIQQQTGCKVQFK-NEMEGDFKIAMLNGTPQQVQAAKDALVECIQSHSERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRDQGRNTGGGRHQQLPPGHKHVCVDVPSNKCGLIIGKGGETLKFIHQDTKVFIEIERNSPP--DAPTRVFHLKGTDEMIEMALHEMRDKINDQNICA 1503
            +++ EE  +P+K+VG +IGRGGE I+++Q+ESG KIQ+A++     ++   ER   +TG  +++ +AK L+      G++ +R  +G G      ++    E+LIP++KVGLVIG+GGETIK LQER G KMV+ QDG      +KPLRI+G+  KV   +++V +++ +K   +   +  D N  M     G    E  VPR AVG VIG  G  I  IQ   G ++QFK ++     + A + G P + Q A   + E I +  ER   GG     GR +  G    G                              P G + +   VP++KCGL+IGKGGE +K I+Q +   +E++RN PP  D   R F ++G  + IE+A   + +K+   N+ A
Sbjct:   76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASE-----SSGIPERPCVLTGTPESIEQAKRLL------GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRM-----GGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGA-----------------------------PGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLIDEKVGGTNLGA 432

The following BLAST results are available for this feature:

BLAST of TCONS_00014764 vs. Swiss-Prot (Human)

BLAST of TCONS_00014764 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FUBP3	2.169e-53	34.58	Far upstream element-binding protein 3 OS=Homo sap...	[more]

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TCONS_00014764 (transcript) - C. hemisphaerica