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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014756 ID=TCONS_00014756|Name=TCONS_00014756|organism=Clytia hemisphaerica|type=transcript|length=1676bp
tgcctCAGTCAAACTAAGCTCTAAAATTCCAGAGTCCCAGATCATATTGC
TAGATCTAATTAACCCCAGAGTTGTCAATTTTTAGATTCATTTAATCAGA
GTCGTTTCAATACACCTGTCCAGGCAATCTACCAGGTGCATCAGGAATGA
GTGACCCATGTAATGCGGAAAATTTACATCCAAATGGGAAAGAATGACAG
AAAAACAGGCTCTTTATATCAGGTTATTGAAATGTTTCGGGCTGCAGAAG
TTGACTGAAGAATGAAGTGTCATGGTTTatatttgtattttgtttttctt
ttagggCTACAAACAAATTATAGttaataaaatcaatcaataattatgCT
TCATCGTGTATCATtctcaaaagaagaaaatatttgtgGCAAATTGAAGT
ATGTTGTTCCTTGGTCATGTATAGATGTAGATTCTGACCAACCCATCAAA
AGATTAGCCTTTCGGGGGAAAAAAGGAATTGGTTGCTCAGAAGGAAATAT
CATAATTTACGACAACAAGGGATGTCTTTTTAGAGCTGATTTTAATGTCA
AGTCCTTTGATCCTTTTGTTCCGTTATTATGTCACCCTGGTGTTAAAGGA
TTCTCTCAACTGGCTATTTCCAATGACCAAAAACTGTCGGTTAGTTTTTT
CAACAAAGTATATACCAAGCGAAGAAAACTTAGAAACTATAATCCTCACT
TTGATGTTTGTTCTGAAAATCGGATAACAATAATGAAAGTTCTTCACAAG
GACTGCAATAAAGAACTATGCAAAGAACTACCTACTATAGAATTTACTTC
GGATATTCATGATATCAAAATATCACAGAAAAACAACTATATTTCTTTAG
TTTATTGTGTGCGTGGGCAATACACTGCTTGTAAGGTTTTCAAAATGATA
AATGAAACTATCAAAGTTGTTTTCACTAAGAAATTTGAAGACGATGTTGA
TGATTATGATGACTTGATGACTTCCTATTCAATGTTTAATCAAAGAGAAG
ATTTGGTTCTAATTGTGTTTCAAGATCAAGTTCAGAAACCATGCACCATT
TTAGTTTATGATATCATAAATGATAAGGAAACAATCATCCCCTTTGATAA
GGAAACTGAATGGCTCAACATTGAAATAGTGAGTACCGCCAATCAAGATT
TGGTATTCATTTGTGATCAAGCATCAACagttctcaaagtttttgacatt
gaTATCAAGAAGTCATCACCGCAAAACATAATTGAGTGGGACATTGATGA
GGAACTTGATATAGACCATATCTTTGAAAGAAATCTTTGTTTGTACTGGC
GGTGACTATTCAAATGGACTGGAAGTGTCAGTTTATTTTTTCCATGAgga
gaaagaaaaacataattctttATTGACTTTTGCTAGACGAGCTGTCCACA
CAAATTACACAATGGCTCAACTCAAGACTTTCAATCTTCCTTTctcatta
aaaattattttaggtgttctttgattttattcaacGATTTAATCATTGCA
AAACATGTTGAATGATGGTTGCTTTTGGGGTGTTTCTTTGTTTGATGTTT
ACTGTGTTAAATACCATGTATGGAAGAGATATTGGATTTTCAATTGGTTT
TGTCATAGTTTGTGAAAAAGCCTAAGCTGCTTTTCATTCTGAAATTTGCA
TTTTATCAGATAATTTAACAGTAATT Run BLAST on NCBI protein sequence of TCONS_00014756-protein >TCONS_00014756-protein ID=TCONS_00014756-protein|Name=TCONS_00014756-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MLHRVSFSKEENICGKLKYVVPWSCIDVDSDQPIKRLAFRGKKGIGCSEG
NIIIYDNKGCLFRADFNVKSFDPFVPLLCHPGVKGFSQLAISNDQKLSVS
FFNKVYTKRRKLRNYNPHFDVCSENRITIMKVLHKDCNKELCKELPTIEF
TSDIHDIKISQKNNYISLVYCVRGQYTACKVFKMINETIKVVFTKKFEDD
VDDYDDLMTSYSMFNQREDLVLIVFQDQVQKPCTILVYDIINDKETIIPF
DKETEWLNIEIVSTANQDLVFICDQASTVLKVFDIDIKKSSPQNIIEWDI
DEELDIDHIFERNLCLYWR Run BLAST on NCBI transcript from alignment at sc0000197:379238..380913 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014756 ID=TCONS_00014756|Name=TCONS_00014756|organism=Clytia hemisphaerica|type=transcript|length=1676bp|location=Sequence derived from alignment at sc0000197:379238..380913 (Clytia hemisphaerica)
AATTACTGTTAAATTATCTGATAAAATGCAAATTTCAGAATGAAAAGCAG
CTTAGGCTTTTTCACAAACTATGACAAAACCAATTGAAAATCCAATATCT
CTTCCATACATGGTATTTAACACAGTAAACATCAAACAAAGAAACACCCC
AAAAGCAACCATCATTCAACATGTTTTGCAATGATTAAATCgttgaataa
aatcaaagaacacctaaaataatttttaatgagAAAGGAAGATTGAAAGT
CTTGAGTTGAGCCATTGTGTAATTTGTGTGGACAGCTCGTCTAGCAAAAG
TCAATaaagaattatgtttttctttctccTCATGGAAAAAATAAACTGAC
ACTTCCAGTCCATTTGAATAGTCACCGCCAGTACAAACAAAGATTTCTTT
CAAAGATATGGTCTATATCAAGTTCCTCATCAATGTCCCACTCAATTATG
TTTTGCGGTGATGACTTCTTGATAtcaatgtcaaaaactttgagaactGT
TGATGCTTGATCACAAATGAATACCAAATCTTGATTGGCGGTACTCACTA
TTTCAATGTTGAGCCATTCAGTTTCCTTATCAAAGGGGATGATTGTTTCC
TTATCATTTATGATATCATAAACTAAAATGGTGCATGGTTTCTGAACTTG
ATCTTGAAACACAATTAGAACCAAATCTTCTCTTTGATTAAACATTGAAT
AGGAAGTCATCAAGTCATCATAATCATCAACATCGTCTTCAAATTTCTTA
GTGAAAACAACTTTGATAGTTTCATTTATCATTTTGAAAACCTTACAAGC
AGTGTATTGCCCACGCACACAATAAACTAAAGAAATATAGTTGTTTTTCT
GTGATATTTTGATATCATGAATATCCGAAGTAAATTCTATAGTAGGTAGT
TCTTTGCATAGTTCTTTATTGCAGTCCTTGTGAAGAACTTTCATTATTGT
TATCCGATTTTCAGAACAAACATCAAAGTGAGGATTATAGTTTCTAAGTT
TTCTTCGCTTGGTATATACTTTGTTGAAAAAACTAACCGACAGTTTTTGG
TCATTGGAAATAGCCAGTTGAGAGAATCCTTTAACACCAGGGTGACATAA
TAACGGAACAAAAGGATCAAAGGACTTGACATTAAAATCAGCTCTAAAAA
GACATCCCTTGTTGTCGTAAATTATGATATTTCCTTCTGAGCAACCAATT
CCTTTTTTCCCCCGAAAGGCTAATCTTTTGATGGGTTGGTCAGAATCTAC
ATCTATACATGACCAAGGAACAACATACTTCAATTTGCcacaaatatttt
cttcttttgagaATGATACACGATGAAGcataattattgattgattttat
taaCTATAATTTGTTTGTAGccctaaaagaaaaacaaaatacaaatatAA
ACCATGACACTTCATTCTTCAGTCAACTTCTGCAGCCCGAAACATTTCAA
TAACCTGATATAAAGAGCCTGTTTTTCTGTCATTCTTTCCCATTTGGATG
TAAATTTTCCGCATTACATGGGTCACTCATTCCTGATGCACCTGGTAGAT
TGCCTGGACAGGTGTATTGAAACGACTCTGATTAAATGAATCTAAAAATT
GACAACTCTGGGGTTAATTAGATCTAGCAATATGATCTGGGACTCTGGAA
TTTTAGAGCTTAGTTTGACTGaggca Coding sequence (CDS) from alignment at sc0000197:379238..380913 >TCONS_00014756 ID=TCONS_00014756|Name=TCONS_00014756|organism=Clytia hemisphaerica|type=CDS|length=960bp|location=Sequence derived from alignment at sc0000197:379238..380913 (Clytia hemisphaerica)
TCACCGCCAGTACAAACAAAGATTTCTTTCAAAGATATGGTCTATATCAA
GTTCCTCATCAATGTCCCACTCAATTATGTTTTGCGGTGATGACTTCTTG
ATAtcaatgtcaaaaactttgagaactGTTGATGCTTGATCACAAATGAA
TACCAAATCTTGATTGGCGGTACTCACTATTTCAATGTTGAGCCATTCAG
TTTCCTTATCAAAGGGGATGATTGTTTCCTTATCATTTATGATATCATAA
ACTAAAATGGTGCATGGTTTCTGAACTTGATCTTGAAACACAATTAGAAC
CAAATCTTCTCTTTGATTAAACATTGAATAGGAAGTCATCAAGTCATCAT
AATCATCAACATCGTCTTCAAATTTCTTAGTGAAAACAACTTTGATAGTT
TCATTTATCATTTTGAAAACCTTACAAGCAGTGTATTGCCCACGCACACA
ATAAACTAAAGAAATATAGTTGTTTTTCTGTGATATTTTGATATCATGAA
TATCCGAAGTAAATTCTATAGTAGGTAGTTCTTTGCATAGTTCTTTATTG
CAGTCCTTGTGAAGAACTTTCATTATTGTTATCCGATTTTCAGAACAAAC
ATCAAAGTGAGGATTATAGTTTCTAAGTTTTCTTCGCTTGGTATATACTT
TGTTGAAAAAACTAACCGACAGTTTTTGGTCATTGGAAATAGCCAGTTGA
GAGAATCCTTTAACACCAGGGTGACATAATAACGGAACAAAAGGATCAAA
GGACTTGACATTAAAATCAGCTCTAAAAAGACATCCCTTGTTGTCGTAAA
TTATGATATTTCCTTCTGAGCAACCAATTCCTTTTTTCCCCCGAAAGGCT
AATCTTTTGATGGGTTGGTCAGAATCTACATCTATACATGACCAAGGAAC
AACATACTTCAATTTGCcacaaatattttcttcttttgagaATGATACAC
GATGAAGcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014756-exon-sc0000197-1491911889:379238..380913 | TCONS_00014756-exon-sc0000197-1491911889:379238..380913 | Clytia hemisphaerica | exon |
| TCONS_00014756-exon-sc0000197-1510915933:379238..380913 | TCONS_00014756-exon-sc0000197-1510915933:379238..380913 | Clytia hemisphaerica | exon |
| TCONS_00014756-exon-sc0000197-1575043694:379238..380913 | TCONS_00014756-exon-sc0000197-1575043694:379238..380913 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:379238..380913 . |
Blast
The following BLAST results are available for this feature:
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