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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014746 ID=TCONS_00014746|Name=TCONS_00014746|organism=Clytia hemisphaerica|type=transcript|length=2080bp
ttgttaGTTATGGGCTGTAATTAGATCGTCCCTAGTTTTGGAGGCCAGAA
ATTTTTCTTAAACTAAACAATTCAATGGGTCTGGCCCTTTCACTCACCAC
TGTTTGTATAAGGATGGAAAAAACTTCAAAGTGAAAGTTGTTAGTATTTC
AATTATCTTTAAACTTTGGCCAAAGAACTATATCTTCAAAGTtgatctta
tgaaaaaaacattATGTTAAGATTTTGATGATGTCAGATTTGGTTGTGGC
TTCTTTGCGGTACAGGTGAGAGTAGATCTTGTATCTTTCTATCTTTGATC
TGGAGTTTTCTGGAGTTTCTGAACCTTACATGAAAAGGATTCTCGGTTCA
GAAGCTCTGTACGCTACCACTAGTCTTCGAAGCCACCAATCGAATTCACA
ATCACAATTTACTTATAGTGTGTATCTTACAGGCCCaaataccatcaact
gctctaacttgggactatctgacaaaacatgggatggcaattcagccacc
atttcgaaaaacctccaaagtcatctgatttgagttaatgaacggcgtat
taaaaaatacaacgAATGAATGACAGAAGAAGTGTAGTTGATGAACTTGG
tagaagtatcaaaacaaatttgatgttatcaaagtgatttaacagtaagt
aaaaatacagtccagatatcaacaatcccatgtttcgaccaaccattcca
agttagagcagttgacggtagacTACCTAAAGAAAATCTTGGCGAATTTG
CCAAATTGCctaaaaattttgccaaattcggcaaaatttctttccgccaa
atttcaatttataggtattattcgccaaaataaattctcaacaaatctaa
ttttctttcaatttagtctctatttctcctaaaaatccttttatcctttt
attcagctaaaatattgaacaatgtcgttcgccaaaattaattctcttca
aatttagaaatcttATTAAATCACCAAAATAGATTCTGTCAACTTGCACC
AAAATTGGCCAATGGGCatattcgccaaaatttcttctcttaaagaTATA
TTAACATTATACCAGAGTTAGCCCCAACACTAGAGGGCCCCTACCAAGGC
CTTGGGCCTTATATTTCCCTACCAATGCCGACTCCCACCCTATTTTGACT
CTTGAGCTacaccctgaccctaactgatccTGAACCTAATATGAACGATT
TTCACGTCGACCCATAAGGATTGAGAAGTCAGCATCTACCTTCACCACCT
ATAGTGATTTGGTgaggttggcaaacgatatcatcatCATCCGCCACCAG
GATGCATTGtgatgcatcctctcttattttccccctattttctactttcc
tatcttctatcctgatttactgactttctcaagtgcgtctaactgttttc
taagtaatTTTCTGAAATCTGTCTATACCGCTACCAGTGAAATAGGTCGC
CTACCCTCTTGCCGCCCCGGTGCGAACCACCAAAACATGCAAGTGACCTT
GGTTTACAAAACCAATGCCTAACTGCTTGCGCCAGCGATATACGGCAGAA
TACTGTCATttacaaatacttatagcgtgcgTGTAGTTTACTTGACCTTA
ACAAAGCTCCCAAACCTACAACAAGAAGGATCCCTACAAGATTCTGCTGA
GTTAAGTCTCAGGGGTacgaatgggccattccagaatttgtctgtaacaa
tttttgagggcaaaagttttcaacaaaattcacaATTTCCAAGGCAAGAG
TAGAAAATAACTTCTCAATAATAGCCTGGAAAAGTATTGAAATACCAAAG
ATCCAGACCTAAAACCTGAAACAATCTTCTCATAGTAGGATCTGAATATT
GGCTTAGATTGCTAGGACTTAGTCTTTATAGGGCTCTTTATTTCATAGAG
TTAAGTTCAATTTTGATGAGTCCTGTGAGCTGATTAGAAGTGATTCTGAT
CcatgttgttgatttttttgtaaagtttCCATGGTATACTGACAGATAAT
TGAAAATCAGATATTTACTGAACcccaaaatttccattttgcCATCTACA
AATACTAAGAAAACCTCATGTAGCCAAAAA Run BLAST on NCBI transcript from alignment at sc0000197:139294..141373 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014746 ID=TCONS_00014746|Name=TCONS_00014746|organism=Clytia hemisphaerica|type=transcript|length=2080bp|location=Sequence derived from alignment at sc0000197:139294..141373 (Clytia hemisphaerica)
TTTTTGGCTACATGAGGTTTTCTTAGTATTTGTAGATGgcaaaatggaaa
ttttgggGTTCAGTAAATATCTGATTTTCAATTATCTGTCAGTATACCAT
GGaaactttacaaaaaaatcaacaacatgGATCAGAATCACTTCTAATCA
GCTCACAGGACTCATCAAAATTGAACTTAACTCTATGAAATAAAGAGCCC
TATAAAGACTAAGTCCTAGCAATCTAAGCCAATATTCAGATCCTACTATG
AGAAGATTGTTTCAGGTTTTAGGTCTGGATCTTTGGTATTTCAATACTTT
TCCAGGCTATTATTGAGAAGTTATTTTCTACTCTTGCCTTGGAAATtgtg
aattttgttgaaaacttttgccctcaaaaattgttacagacaaattctgg
aatggcccattcgtACCCCTGAGACTTAACTCAGCAGAATCTTGTAGGGA
TCCTTCTTGTTGTAGGTTTGGGAGCTTTGTTAAGGTCAAGTAAACTACAc
gcacgctataagtatttgtaaATGACAGTATTCTGCCGTATATCGCTGGC
GCAAGCAGTTAGGCATTGGTTTTGTAAACCAAGGTCACTTGCATGTTTTG
GTGGTTCGCACCGGGGCGGCAAGAGGGTAGGCGACCTATTTCACTGGTAG
CGGTATAGACAGATTTCAGAAAattacttagaaaacagttagacgcactt
gagaaagtcagtaaatcaggatagaagataggaaagtagaaaataggggg
aaaataagagaggatgcatcaCAATGCATCCTGGTGGCGGATGatgatga
tatcgtttgccaacctcACCAAATCACTATAGGTGGTGAAGGTAGATGCT
GACTTCTCAATCCTTATGGGTCGACGTGAAAATCGTTCATATTAGGTTCA
ggatcagttagggtcagggtgtAGCTCAAGAGTCAAAATAGGGTGGGAGT
CGGCATTGGTAGGGAAATATAAGGCCCAAGGCCTTGGTAGGGGCCCTCTA
GTGTTGGGGCTAACTCTGGTATAATGTTAATATAtctttaagagaagaaa
ttttggcgaatatGCCCATTGGCCAATTTTGGTGCAAGTTGACAGAATCT
ATTTTGGTGATTTAATaagatttctaaatttgaagagaattaattttggc
gaacgacattgttcaatattttagctgaataaaaggataaaaggattttt
aggagaaatagagactaaattgaaagaaaattagatttgttgagaattta
ttttggcgaataatacctataaattgaaatttggcggaaagaaattttgc
cgaatttggcaaaatttttagGCAATTTGGCAAATTCGCCAAGATTTTCT
TTAGGTAgtctaccgtcaactgctctaacttggaatggttggtcgaaaca
tgggattgttgatatctggactgtatttttacttactgttaaatcacttt
gataacatcaaatttgttttgatacttctaCCAAGTTCATCAACTACACT
TCTTCTGTCATTCATTcgttgtattttttaatacgccgttcattaactca
aatcagatgactttggaggtttttcgaaatggtggctgaattgccatccc
atgttttgtcagatagtcccaagttagagcagttgatggtatttGGGCCT
GTAAGATACACACTATAAGTAAATTGTGATTGTGAATTCGATTGGTGGCT
TCGAAGACTAGTGGTAGCGTACAGAGCTTCTGAACCGAGAATCCTTTTCA
TGTAAGGTTCAGAAACTCCAGAAAACTCCAGATCAAAGATAGAAAGATAC
AAGATCTACTCTCACCTGTACCGCAAAGAAGCCACAACCAAATCTGACAT
CATCAAAATCTTAACATaatgtttttttcataagatcaACTTTGAAGATA
TAGTTCTTTGGCCAAAGTTTAAAGATAATTGAAATACTAACAACTTTCAC
TTTGAAGTTTTTTCCATCCTTATACAAACAGTGGTGAGTGAAAGGGCCAG
ACCCATTGAATTGTTTAGTTTAAGAAAAATTTCTGGCCTCCAAAACTAGG
GACGATCTAATTACAGCCCATAACtaacaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014746-exon-sc0000197-1491911889:139294..141373 | TCONS_00014746-exon-sc0000197-1491911889:139294..141373 | Clytia hemisphaerica | exon |
| TCONS_00014746-exon-sc0000197-1510915933:139294..141373 | TCONS_00014746-exon-sc0000197-1510915933:139294..141373 | Clytia hemisphaerica | exon |
| TCONS_00014746-exon-sc0000197-1575043694:139294..141373 | TCONS_00014746-exon-sc0000197-1575043694:139294..141373 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:139294..141373 . |
Blast
The following BLAST results are available for this feature:
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