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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014700 ID=TCONS_00014700|Name=TCONS_00014700|organism=Clytia hemisphaerica|type=transcript|length=2162bp
AATACCTTGTAAATCAAACGCCAAAGACTTtgaatttttgCGCAAGATCA
GTCAGCCTTTCCGCAGGCTACAGCCCGTTCAAGAAACGAGTCACGCGAAC
ATTCACGAAAACACGACTCTTGCTCACGAAATGGAAACAAACACCACAAG
ATCACGACCTCGTTCGAAAACATTGGCTGATATCTCACAGGATTCATTTG
AGATTAGACGTCGTTCAGAAGATTCACACAAAGCTAGCATTTTCAGTCAC
CTTGGTCACACTATATTTGTTCACCATCATAAATCGGATAAAGAGAGAGT
CCATGGATACAAGTCTTTCAAAATTCTCGTTCTCGGTGTTAAAGAAGTCG
GTAAAACGTCAATCATAAAACGTTTCATCAATGGTAAATTCAACGACGAA
TATCTGCCGACAATTTCCGAAGAATATGAAACAGGtatatttctcgagat
tgaaaataaattaaaacagTTTGATCTTGTTTTCAAAGACTTTGGAGGTg
acttaaaaacattttatccAGAACTTTACAAAGATGAAGTCAAAAGTGCA
GATGGATTTATATTAGTACACACGGAAAACATCCCAGAAAGCTTTGCAGA
AGTATTAGAAATGGTAGCTGATATCCAGCATGCAAGGCGTCAAGAAGTCT
CAATTATGATTCTAGAAAATCAAAGTGAGCGACAGAAtcagtttgatgtt
tttaaagtTACCAGGAAATCGTTCATTATGGAGGGAATGTTGAATGATTC
AGTATCAGCCAAAATGAATTATAGAGTTGATGAATCAATCGCTGAACTCG
TCAAAGAAATGGAGAAGAAGCTCACGTGAGCTTTatattatctttccaac
gatctAAACATCTCAAACGAGGTTGTGTTATTGATATGTTCAGAGAGGAA
ACTGGtttgagaaatatttgaaatagaaatctttttattccaaaaaaaaa
gaaaaaggttcaGAAAATGATACCATGTCTTGACTAGCATGTATTCTAAA
GGGAtgtattttaaaacttttcccCTGCAATCATTACGATTATCTCAAAA
GGAAACAGCGGAATGAAATAGGATGTACTTGTGAAAAATGACAGTTTAAA
TATACTTTTATcaacaaacacaaaaaaatattcaagaaattTGATACTTT
CAAGTTTCGAAATTCCATTTTGACCGCAATAGAGCTACTTCGCTACTAAG
TGGCACGTATAAGCTTTTTTGATATCAGATTTCCTAattaaattttaaga
tattatgAGACAAATTCTAAAGTTACCTTAGCGGCCCTTtctacaccggc
ccttattggagTTATTTTTCGTCGCTGGTGAAATGAGTACGCCGGCGTAA
GGGCTCAGAATTAAGGCGGGCTAGAGATGGAAAAATTGATCTTGTGCTAT
AAGAACTGGCGCTTAATTAaggaccggcgtaaaaagggccgacaAGGTAA
ATACAAGAAAGATATTCTTAAAGAAAATTCATACCTTTATACCAGAGCTA
TAGGAACGGTGAAAATGTCTCTCATTCATTGCCAGTCACGTTATCAACAC
ATTCAAGTACATTCTTTCGACAGCCAAACTTAGCTAAACTttctttttaa
tatatttttttcattttctatatTTTGACTCTAAATGAAAAGACGAGAAG
AGATTCAATTAAAGTTTTCTATTATTATAAAGTGCCCTTAACGATACTAG
CCTTTTTTCCACCATACTTTATCCTAAGGATAGGGTAGGAATCATTTTAC
AGATCCATCCACCAATGGTCCACCCAAAGTTTTCCACTAACCGTCATTTA
ATCATAATTATTATAGCACCACTGGCCCATCGTGTACCCAAACTTCTCCA
CTGGCCCATTGTCGTGGCAATTTCCTCTCAGGAAAAAATTTACCCATGAA
AAATGGTCTAAAGTAGATGAGTCTGTCGATTTAGTGTATTTTCTTTTCAC
ACTAGTTTaggtttgcaaaaaaaatttatacatatctttttattatatat
attatgtacagttgaaattttatcaaatattatcAGTATATTGAATAATA
GAATCAACATCCTCTGTCAAAAAGGTAGCATGTTTCAAAATTGCTCATCT
TTATTGTGTCTTTTTTAAAGTAAACAGgtttatttgtctttttctatcaa
tgtacacgtttt Run BLAST on NCBI protein sequence of TCONS_00014700-protein >TCONS_00014700-protein ID=TCONS_00014700-protein|Name=TCONS_00014700-protein|organism=Clytia hemisphaerica|type=polypeptide|length=275bp
IPCKSNAKDFEFLRKISQPFRRLQPVQETSHANIHENTTLAHEMETNTTR
SRPRSKTLADISQDSFEIRRRSEDSHKASIFSHLGHTIFVHHHKSDKERV
HGYKSFKILVLGVKEVGKTSIIKRFINGKFNDEYLPTISEEYETGIFLEI
ENKLKQFDLVFKDFGGDLKTFYPELYKDEVKSADGFILVHTENIPESFAE
VLEMVADIQHARRQEVSIMILENQSERQNQFDVFKVTRKSFIMEGMLNDS
VSAKMNYRVDESIAELVKEMEKKLT Run BLAST on NCBI transcript from alignment at sc0000197:312767..315608+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014700 ID=TCONS_00014700|Name=TCONS_00014700|organism=Clytia hemisphaerica|type=transcript|length=2842bp|location=Sequence derived from alignment at sc0000197:312767..315608+ (Clytia hemisphaerica)
AATACCTTGTAAATCAAACGCCAAAGACTTtgaatttttggtatttttac
tTAAGCCTTTTGTAGACTAACTGTGGCGGACTAATCCAATGTCACTTTAT
AATTTATATTTACACTTCCCCAAAAAAAGGCTTTTTCCCAATTGGATTGG
CTTAAGGGTAGGCTAAAAACTTATTGTAAAACGATACGCAAAACGAAACA
TAGAGAAGAAACTAAAACTAATGAAAAACTTCGAAGGTATGAGAAACAAA
TAGCCGGGCGAAGATTTTTGAAGAAGtgaaaatttgcaatatttttccaT
TTCCACTTTATTTGAACAAGTTTTCAAACAAACCAGAAAGAAATACAACC
AAATGTTATAAATAGATGATGAAGAGATATCTCTTTTCATAATGAAGTGG
TTTGTGCCAAGGATAGTAAAACATTTGACCACAAGTGAAATTAGTGGACT
TTTCGTCCTACTGGAAGCCTGGTAGCAGGTGGTAATAATGGATGAGAAAA
TTAGCAAAGCAAGGGTATACCAACTTTCaacaatttaatttcaattttaa
agggAAAATGTAGCAAAGTGCCATgaaagtgacaaaaaatcagtctaaaa
taataattaaaaattaaagctttttctaaagcaaattatttttaaagggT
CTAAAATAGCGAAGGAAAAGGTCCTGAGGAGGCGTTTGTTAAGCGTAAtt
tgttttccatttttctttagCGCAAGATCAGTCAGCCTTTCCGCAGGCTA
CAGCCCGTTCAAGAAACGAGTCACGCGAACATTCACGAAAACACGACTCT
TGCTCACGAAATGGAAACAAACACCACAAGATCACGACCTCGTTCGAAAA
CATTGGCTGATATCTCACAGGATTCATTTGAGATTAGACGTCGTTCAGAA
GATTCACACAAAGCTAGCATTTTCAGTCACCTTGGTCACACTATATTTGT
TCACCATCATAAATCGGATAAAGAGAGAGTCCATGGATACAAGTCTTTCA
AAATTCTCGTTCTCGGTGTTAAAGAAGTCGGTAAAACGTCAATCATAAAA
CGTTTCATCAATGGTAAATTCAACGACGAATATCTGCCGACAATTTCCGA
AGAATATGAAACAGGtatatttctcgagattgaaaataaattaaaacagT
TTGATCTTGTTTTCAAAGACTTTGGAGGTgacttaaaaacattttatccA
GAACTTTACAAAGATGAAGTCAAAAGTGCAGATGGATTTATATTAGTACA
CACGGAAAACATCCCAGAAAGCTTTGCAGAAGTATTAGAAATGGTAGCTG
ATATCCAGCATGCAAGGCGTCAAGAAGTCTCAATTATGATTCTAGAAAAT
CAAAGTGAGCGACAGAAtcagtttgatgtttttaaagtTACCAGGAAATC
GTTCATTATGGAGGGAATGTTGAATGATTCAGTATCAGCCAAAATGAATT
ATAGAGTTGATGAATCAATCGCTGAACTCGTCAAAGAAATGGAGAAGAAG
CTCACGTGAGCTTTatattatctttccaacgatctAAACATCTCAAACGA
GGTTGTGTTATTGATATGTTCAGAGAGGAAACTGGtttgagaaatatttg
aaatagaaatctttttattccaaaaaaaaagaaaaaggttcaGAAAATGA
TACCATGTCTTGACTAGCATGTATTCTAAAGGGAtgtattttaaaacttt
tcccCTGCAATCATTACGATTATCTCAAAAGGAAACAGCGGAATGAAATA
GGATGTACTTGTGAAAAATGACAGTTTAAATATACTTTTATcaacaaaca
caaaaaaatattcaagaaattTGATACTTTCAAGTTTCGAAATTCCATTT
TGACCGCAATAGAGCTACTTCGCTACTAAGTGGCACGTATAAGCTTTTTT
GATATCAGATTTCCTAattaaattttaagatattatgAGACAAATTCTAA
AGTTACCTTAGCGGCCCTTtctacaccggcccttattggagTTATTTTTC
GTCGCTGGTGAAATGAGTACGCCGGCGTAAGGGCTCAGAATTAAGGCGGG
CTAGAGATGGAAAAATTGATCTTGTGCTATAAGAACTGGCGCTTAATTAa
ggaccggcgtaaaaagggccgacaAGGTAAATACAAGAAAGATATTCTTA
AAGAAAATTCATACCTTTATACCAGAGCTATAGGAACGGTGAAAATGTCT
CTCATTCATTGCCAGTCACGTTATCAACACATTCAAGTACATTCTTTCGA
CAGCCAAACTTAGCTAAACTttctttttaatatatttttttcattttcta
tatTTTGACTCTAAATGAAAAGACGAGAAGAGATTCAATTAAAGTTTTCT
ATTATTATAAAGTGCCCTTAACGATACTAGCCTTTTTTCCACCATACTTT
ATCCTAAGGATAGGGTAGGAATCATTTTACAGATCCATCCACCAATGGTC
CACCCAAAGTTTTCCACTAACCGTCATTTAATCATAATTATTATAGCACC
ACTGGCCCATCGTGTACCCAAACTTCTCCACTGGCCCATTGTCGTGGCAA
TTTCCTCTCAGGAAAAAATTTACCCATGAAAAATGGTCTAAAGTAGATGA
GTCTGTCGATTTAGTGTATTTTCTTTTCACACTAGTTTaggtttgcaaaa
aaaatttatacatatctttttattatatatattatgtacagttgaaattt
tatcaaatattatcAGTATATTGAATAATAGAATCAACATCCTCTGTCAA
AAAGGTAGCATGTTTCAAAATTGCTCATCTTTATTGTGTCTTTTTTAAAG
TAAACAGgtttatttgtctttttctatcaatgtacacgtttt Coding sequence (CDS) from alignment at sc0000197:312767..315608+ >TCONS_00014700 ID=TCONS_00014700|Name=TCONS_00014700|organism=Clytia hemisphaerica|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000197:312767..315608+ (Clytia hemisphaerica)
ATACCTTGTAAATCAAACGCCAAAGACTTtgaatttttgCGCAAGATCAG
TCAGCCTTTCCGCAGGCTACAGCCCGTTCAAGAAACGAGTCACGCGAACA
TTCACGAAAACACGACTCTTGCTCACGAAATGGAAACAAACACCACAAGA
TCACGACCTCGTTCGAAAACATTGGCTGATATCTCACAGGATTCATTTGA
GATTAGACGTCGTTCAGAAGATTCACACAAAGCTAGCATTTTCAGTCACC
TTGGTCACACTATATTTGTTCACCATCATAAATCGGATAAAGAGAGAGTC
CATGGATACAAGTCTTTCAAAATTCTCGTTCTCGGTGTTAAAGAAGTCGG
TAAAACGTCAATCATAAAACGTTTCATCAATGGTAAATTCAACGACGAAT
ATCTGCCGACAATTTCCGAAGAATATGAAACAGGtatatttctcgagatt
gaaaataaattaaaacagTTTGATCTTGTTTTCAAAGACTTTGGAGGTga
cttaaaaacattttatccAGAACTTTACAAAGATGAAGTCAAAAGTGCAG
ATGGATTTATATTAGTACACACGGAAAACATCCCAGAAAGCTTTGCAGAA
GTATTAGAAATGGTAGCTGATATCCAGCATGCAAGGCGTCAAGAAGTCTC
AATTATGATTCTAGAAAATCAAAGTGAGCGACAGAAtcagtttgatgttt
ttaaagtTACCAGGAAATCGTTCATTATGGAGGGAATGTTGAATGATTCA
GTATCAGCCAAAATGAATTATAGAGTTGATGAATCAATCGCTGAACTCGT
CAAAGAAATGGAGAAGAAGCTCACGTGAATACCTTGTAAATCAAACGCCA
AAGACTTtgaatttttgCGCAAGATCAGTCAGCCTTTCCGCAGGCTACAG
CCCGTTCAAGAAACGAGTCACGCGAACATTCACGAAAACACGACTCTTGC
TCACGAAATGGAAACAAACACCACAAGATCACGACCTCGTTCGAAAACAT
TGGCTGATATCTCACAGGATTCATTTGAGATTAGACGTCGTTCAGAAGAT
TCACACAAAGCTAGCATTTTCAGTCACCTTGGTCACACTATATTTGTTCA
CCATCATAAATCGGATAAAGAGAGAGTCCATGGATACAAGTCTTTCAAAA
TTCTCGTTCTCGGTGTTAAAGAAGTCGGTAAAACGTCAATCATAAAACGT
TTCATCAATGGTAAATTCAACGACGAATATCTGCCGACAATTTCCGAAGA
ATATGAAACAGGtatatttctcgagattgaaaataaattaaaacagTTTG
ATCTTGTTTTCAAAGACTTTGGAGGTgacttaaaaacattttatccAGAA
CTTTACAAAGATGAAGTCAAAAGTGCAGATGGATTTATATTAGTACACAC
GGAAAACATCCCAGAAAGCTTTGCAGAAGTATTAGAAATGGTAGCTGATA
TCCAGCATGCAAGGCGTCAAGAAGTCTCAATTATGATTCTAGAAAATCAA
AGTGAGCGACAGAAtcagtttgatgtttttaaagtTACCAGGAAATCGTT
CATTATGGAGGGAATGTTGAATGATTCAGTATCAGCCAAAATGAATTATA
GAGTTGATGAATCAATCGCTGAACTCGTCAAAGAAATGGAGAAGAAGCTC
ACGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014700-exon-sc0000197-1491911889:312767..312806 | TCONS_00014700-exon-sc0000197-1491911889:312767..312806 | Clytia hemisphaerica | exon |
| TCONS_00014700-exon-sc0000197-1510915933:312767..312806 | TCONS_00014700-exon-sc0000197-1510915933:312767..312806 | Clytia hemisphaerica | exon |
| TCONS_00014700-exon-sc0000197-1575043694:312767..312806 | TCONS_00014700-exon-sc0000197-1575043694:312767..312806 | Clytia hemisphaerica | exon |
| TCONS_00014700-exon-sc0000197-1491911889:313487..315608 | TCONS_00014700-exon-sc0000197-1491911889:313487..315608 | Clytia hemisphaerica | exon |
| TCONS_00014700-exon-sc0000197-1510915933:313487..315608 | TCONS_00014700-exon-sc0000197-1510915933:313487..315608 | Clytia hemisphaerica | exon |
| TCONS_00014700-exon-sc0000197-1575043694:313487..315608 | TCONS_00014700-exon-sc0000197-1575043694:313487..315608 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:312767..315608 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
The following BLAST results are available for this feature:
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