TCONS_00014665 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014665
Unique NameTCONS_00014665
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014665 ID=TCONS_00014665|Name=TCONS_00014665|organism=Clytia hemisphaerica|type=transcript|length=277bp
cccttctttaaatttttacttctcttcttgaaactttcagaacttttttt
aGAAGTGGAGAAACCTCGGGGCCATCGTACTATACAAGGCCAATAAATTT
ATTGTGAACTTCATATTCTATGGAAAATTTTCGGTATTATACTTCTCTTC
TGTGTTAAAGatgaacaaaaaagaaactcagAAAAGTAATAAGCCAAAGC
GAGGATCCGTGAAGGGTTTCGATGGCATTCACGGAGATTTGACAGTTCag
atttttaagcataaattaaattttttt
Run BLAST on NCBI

transcript from alignment at sc0000191:452600..452876

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014665 ID=TCONS_00014665|Name=TCONS_00014665|organism=Clytia hemisphaerica|type=transcript|length=277bp|location=Sequence derived from alignment at sc0000191:452600..452876 (Clytia hemisphaerica)
aaaaaaatttaatttatgcttaaaaatctGAACTGTCAAATCTCCGTGAA
TGCCATCGAAACCCTTCACGGATCCTCGCTTTGGCTTATTACTTTTctga
gtttcttttttgttcatCTTTAACACAGAAGAGAAGTATAATACCGAAAA
TTTTCCATAGAATATGAAGTTCACAATAAATTTATTGGCCTTGTATAGTA
CGATGGCCCCGAGGTTTCTCCACTTCtaaaaaaagttctgaaagtttcaa
gaagagaagtaaaaatttaaagaaggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008211XLOC_008211Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014665-exon-sc0000191-1491911889:452600..452876TCONS_00014665-exon-sc0000191-1491911889:452600..452876Clytia hemisphaericaexon
TCONS_00014665-exon-sc0000191-1510915933:452600..452876TCONS_00014665-exon-sc0000191-1510915933:452600..452876Clytia hemisphaericaexon
TCONS_00014665-exon-sc0000191-1575043694:452600..452876TCONS_00014665-exon-sc0000191-1575043694:452600..452876Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000191supercontigsc0000191:452600..452876 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.56278	3.74842	4.89572	7.9118	3.08429	2.63923	0	1.14349	2.65469	4.09934	0.616263	2.92207	2.05283	1.42125	5.20214	5.18702	6.38998	9.37403	4.11576	2.16086	2.55573	6.18075	35.1683	28.4637	0	1.50399	7.18693	5.03839	38.8809	37.9534
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014665 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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