TCONS_00014650 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014650
Unique NameTCONS_00014650
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014650 ID=TCONS_00014650|Name=TCONS_00014650|organism=Clytia hemisphaerica|type=transcript|length=143bp
AACACTTTTTTGAAGGAAGCCTCGATTGGATTGCAAGCCTTACAAatcaa
caagaaaaaaaaatctacttcagTATCGCCAATCTGCCACAAAAATACAG
CCAACATTGCagatcaaaatttgataagTGAAAGAGAAGAATT
Run BLAST on NCBI

transcript from alignment at sc0000191:31430..31572

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014650 ID=TCONS_00014650|Name=TCONS_00014650|organism=Clytia hemisphaerica|type=transcript|length=143bp|location=Sequence derived from alignment at sc0000191:31430..31572 (Clytia hemisphaerica)
AATTCTTCTCTTTCActtatcaaattttgatctGCAATGTTGGCTGTATT
TTTGTGGCAGATTGGCGATActgaagtagatttttttttcttgttgatTT
GTAAGGCTTGCAATCCAATCGAGGCTTCCTTCAAAAAAGTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008196XLOC_008196Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014650-exon-sc0000191-1491911889:31430..31572TCONS_00014650-exon-sc0000191-1491911889:31430..31572Clytia hemisphaericaexon
TCONS_00014650-exon-sc0000191-1510915933:31430..31572TCONS_00014650-exon-sc0000191-1510915933:31430..31572Clytia hemisphaericaexon
TCONS_00014650-exon-sc0000191-1575043694:31430..31572TCONS_00014650-exon-sc0000191-1575043694:31430..31572Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000191supercontigsc0000191:31430..31572 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014650 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top