TCONS_00014609 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014609
Unique NameTCONS_00014609
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length211

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014609 ID=TCONS_00014609|Name=TCONS_00014609|organism=Clytia hemisphaerica|type=transcript|length=211bp
CGGGTGCTCGCATTTTTTGAGGATTTCAGGGTCAATGTCATTGCTAGCTT
TGTCTGATTTTAGTTGATGAAGGTGCTTTTGAATTTCCTCGATGGACGGG
GTATCAGTGTCTATAGGGATGTTAGTGGAAATGTTACGAAGCTCATTTAT
AAAATCTGGCACGTTAGTCGAGAGTTCTTCAGGGATTATGAGGTTATCAC
GGCTTGGATTG
Run BLAST on NCBI

transcript from alignment at sc0000190:200609..200819

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014609 ID=TCONS_00014609|Name=TCONS_00014609|organism=Clytia hemisphaerica|type=transcript|length=211bp|location=Sequence derived from alignment at sc0000190:200609..200819 (Clytia hemisphaerica)
CAATCCAAGCCGTGATAACCTCATAATCCCTGAAGAACTCTCGACTAACG
TGCCAGATTTTATAAATGAGCTTCGTAACATTTCCACTAACATCCCTATA
GACACTGATACCCCGTCCATCGAGGAAATTCAAAAGCACCTTCATCAACT
AAAATCAGACAAAGCTAGCAATGACATTGACCCTGAAATCCTCAAAAAAT
GCGAGCACCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008175XLOC_008175Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014609-exon-sc0000190-1491911889:200609..200819TCONS_00014609-exon-sc0000190-1491911889:200609..200819Clytia hemisphaericaexon
TCONS_00014609-exon-sc0000190-1510915933:200609..200819TCONS_00014609-exon-sc0000190-1510915933:200609..200819Clytia hemisphaericaexon
TCONS_00014609-exon-sc0000190-1575043694:200609..200819TCONS_00014609-exon-sc0000190-1575043694:200609..200819Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000190supercontigsc0000190:200609..200819 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.41963	1.38436	1.60738	1.57257	0	1.51282	0	1.70869	0	0	5.41553	0.945464	4.72075	5.88305	3.22445	3.46032	4.26284	2.18464	6.03638	7.8958	2.74515	2.00848	0	0	0	0	0	2.07746	3.15135	1.60536
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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