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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014565 ID=TCONS_00014565|Name=TCONS_00014565|organism=Clytia hemisphaerica|type=transcript|length=1992bpRun BLAST on NCBI transcript from alignment at sc0000190:335071..441093+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00014565 ID=TCONS_00014565|Name=TCONS_00014565|organism=Clytia hemisphaerica|type=transcript|length=106023bp|location=Sequence derived from alignment at sc0000190:335071..441093+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00014565 vs. Swiss-Prot (Human)
Match: DYH8 (Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.506e-24 Identity = 72/235 (30.64%), Postives = 130/235 (55.32%), Query Frame = 3
Query: 6 FQSFKSRGLVLFDQDHMNHLLDTLGDAKTTLSAMLTSKYVKPLREEAATWSLKXXXXXXXXXXXXXXXXXXXXXXAIFSIENMIKELPEQSTSFVKADRSYMKLMKKSSETANVLQCCLGGDVSKVLTIKQIYRELETCFKSLKGYLNEKRKVFPRFHFVPDEVLLCMLSKRLSIETVTPYIRDVILAVN----------RFDTITTNQNHRASIDTSRASSGSPQSLKTNLMDM 680
F +FK +G +L ++ + D+ L ++L+++Y P ++ W KL S+++EEWL+V+ LW+ LEA+F ++ K+LP+++ F D+S++K+M+++ E NV+ CC+G + L + ++ +LE C KSL GYL +KR +FPRF FV D VLL +L + T+ P++ V +N R + + + + +D S + G + +L+ M
Sbjct: 1428 FAAFKGKGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWLVVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETMGQL-LPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPAVSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKM 1661 The following BLAST results are available for this feature:
BLAST of TCONS_00014565 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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