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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014515 ID=TCONS_00014515|Name=TCONS_00014515|organism=Clytia hemisphaerica|type=transcript|length=2948bp
CTCGATCGGCTTCCATACAGATAGATTCAAtatcattttcattgtttata
tttttatccaCAATTGTTAAAAAAACGTAATGAGCTTCATCATTGTTGCG
TGATCTTATCGAAGGATAAGATACACAACAGCTTGAAGGACGTCAACAAG
AAGTGTCATACATAATGGAACTAACATCATCCACAGCTGTTTACGGGATT
TTTAATCCTCCACAATCAAGTTCATTCAGTCAAGCCTGTACCTTGATGGA
ACACTGAATGGCTCCAGTCAAATTTATGTGTGAGTGGTCCCTCTTCTTTG
TGATTTAATTTCTAGAGTTGTCTAGTTGTTCAAGTTTCTTGTCGAGGTAC
GAGGCGCAAAGACAAAAGTGATGCGAGTGATGAATCATTTGCTTTGATGA
AGCATATCTTTTTGACAAGAAAAGTGGTTGGCTGTTCGATGATGAATTTA
TGGGTGCGCATGCGCTTGGTAGGAATGTCTGATCCTTCAAATTCTGATTC
TATTGTTtgtagaaatattttgtttgagTGCGGCTGACTGAAGGTGTTTA
TGATATAAGTGAGAGTCACAAAGTGCTCAAGAAAAGTTCAAGGGGAATAG
AATATCGTATTAGACTATCATAACGTATACGCGTGCTCCCACTGTCGGAC
TTTTAAGCAACATTATCATCATCCTTCTTCTTTTCTCTATTTATATATTG
TAGGATTTTCTTTCACAACTAACTTTCTTACTTAGAATACTGTAAAATTG
TCAGCTAACACCCATTGATTGACCTGGATAATGTGGGGATACTTAGATTT
ATGAATGTTTCCTCCACCCTTATCTTCCTGACAACTTGACCTATCAGACA
AAATGTGGGTAATGCATAAGTCAGACTCTAGTCTAGCAAGCTAGACGACT
AATTAAGACatattagaaataaagcaaaaaagtaaattttagtcgtctag
aaacctttgtgcactaactccaaacaaaaaaaaagtgtcaatatcgcaat
taaattttcttctcgctcaaaaaaaattcttgaaaataaaatgtgtgtgg
atttgtgtgttaaaaatgtttaatttgagttgattttattttgagagttt
gttgttgcttaataaattgttttctcgctacgcaagtttctgcgtagcta
ggcccggtatctataaggctggaacaccggattcttccagtcgtttatac
aaactaaatcccgtatcattatttgtgtttattattagtattttgcatgc
attataaacgactccagtctagtcaAACTCCTAGTTTTTCACTCTATTTG
CAAAGCATCTACCGCTGTTGGGTCGGGCTTCCAAGGCTCAAAGAATAGGA
GTTGATGACAAACCCTGGAGGCAAGATCTATTGAGGGAATTACCAACTGA
TGACAAATCTTCCGGAAGACTTGAGGGGACAAAAGCTACTTAAGTCATAA
AAATCTCTGGACTCCCAATCTGCTGCAAAACTCTACCTGACCTAGGAGCT
ATTCTGATGCAATCTCTCTCTCTagagcaaattttcaaatttccttagGG
CTTAGATATCACAATTAGATCTTGACTCTTCTCCATAAAAAAACTTCACT
AGGTAAGCCAAAGCTGTCGTGTTATCTGTCTCAAAGTGAACATTTTTCAT
ATTGATAGTCTTATATGATATGTCAACAAGGCTACAGTAACTGACCCcca
aaattcattaaaagtATTCTCAAAGCCAATTAGTTATAACGTACCATTTG
GGTATTTAAAGTTCACACTTGCATGAAGTATTCGTTAGTTCGTTTCAATG
TCACATCATTTTTGGAAACAaatttaataattggtcataaTCATTGGTCA
TAAACATTAATGACTCACAATCAAAATCATCCTCCTCGCTCATCGACTCT
TTGTTTTAGGTGATTGCGATCATTCTTGGTGTCTTCCCGTCGAACATACA
TTTCTTTTCCGATCACTGTCTTTTGAGAACCAATTTACAAGAGGTGCATT
GCTTCCACTCTATTGCTTCATAATTTCAACAGGCTTCTTCGTGCGCTTCT
TTATGCATTTGGAAAAGACAGCCTCTTGTAGTTTATATTTCTCCCTGTTG
TCTCATTTTCGCTTTTCGTTCTCTTTCTTTTCTCTGCTCTTTCACCAAGA
CAAAAACTTCTTCGGACTCATGCTGATTGGTCATTGGTAGGTTAGCCGAT
TTTTTTGGTTCAATCCAAACATAATGGAGTACTCGATGGACTTCAGTGAA
AGTGGCGCCTTAGTCATATCCAGACATCTCTCGAATTTATATTAGTAATA
TGCTGCACTGCTTTTCCTCATTTTGAACCCATTCTTACCAAATCTCAGAG
GGAatatacataaaatatttcCGATTTATGCTATTTTTCACAGTATTCCA
TGACGCTTTTGTTGAATCGAGACTTGTGTCCATCTGCACGgattttgtga
cgtcactttaagcaaacaaaaaataaacttaGAATGATTGTATTTGTTGG
GAAAAGTTTTTGAGATGCCGAAGATGTTTTACAAACATTTAAATGAGGCC
AGCTACTGTAGATAAATTGCTTTCAGCTTGAGTACATTGATGTGTATCTG
ATTACAATAGAATCTCATAACATACCATGGTCGAAAAATGATTTATCTGA
CTCTCTTGTGAACTCCACCGTCTCCCGATCCTCTGGTTCTCCCACAATGC
TGGATTACCACTCCTATGGACGATTTTAAGCAGAGATCTCCTATTGTTCA
CTGCAGTTCCTTAATGGAGTTTTGGTCCAGGTAGAAAGCAAACTGGGCAT
CCTGACTCCTCCGAGAAACTTGGTGGTAGTAGCTGGTGGTAGCAAAGCCT
GAGTTGTCTATCAATTCTTGGCATCTTGAGTTAGATTTTTTAGAAGTGAT
AATGTAGTTCTAGTCTCAAGAACTCTATTTTCTGGTAATCGTCCCAGG Run BLAST on NCBI transcript from alignment at sc0000188:61676..64623 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014515 ID=TCONS_00014515|Name=TCONS_00014515|organism=Clytia hemisphaerica|type=transcript|length=2948bp|location=Sequence derived from alignment at sc0000188:61676..64623 (Clytia hemisphaerica)
CCTGGGACGATTACCAGAAAATAGAGTTCTTGAGACTAGAACTACATTAT
CACTTCTAAAAAATCTAACTCAAGATGCCAAGAATTGATAGACAACTCAG
GCTTTGCTACCACCAGCTACTACCACCAAGTTTCTCGGAGGAGTCAGGAT
GCCCAGTTTGCTTTCTACCTGGACCAAAACTCCATTAAGGAACTGCAGTG
AACAATAGGAGATCTCTGCTTAAAATCGTCCATAGGAGTGGTAATCCAGC
ATTGTGGGAGAACCAGAGGATCGGGAGACGGTGGAGTTCACAAGAGAGTC
AGATAAATCATTTTTCGACCATGGTATGTTATGAGATTCTATTGTAATCA
GATACACATCAATGTACTCAAGCTGAAAGCAATTTATCTACAGTAGCTGG
CCTCATTTAAATGTTTGTAAAACATCTTCGGCATCTCAAAAACTTTTCCC
AACAAATACAATCATTCtaagtttattttttgtttgcttaaagtgacgtc
acaaaatcCGTGCAGATGGACACAAGTCTCGATTCAACAAAAGCGTCATG
GAATACTGTGAAAAATAGCATAAATCGgaaatattttatgtatatTCCCT
CTGAGATTTGGTAAGAATGGGTTCAAAATGAGGAAAAGCAGTGCAGCATA
TTACTAATATAAATTCGAGAGATGTCTGGATATGACTAAGGCGCCACTTT
CACTGAAGTCCATCGAGTACTCCATTATGTTTGGATTGAACCAAAAAAAT
CGGCTAACCTACCAATGACCAATCAGCATGAGTCCGAAGAAGTTTTTGTC
TTGGTGAAAGAGCAGAGAAAAGAAAGAGAACGAAAAGCGAAAATGAGACA
ACAGGGAGAAATATAAACTACAAGAGGCTGTCTTTTCCAAATGCATAAAG
AAGCGCACGAAGAAGCCTGTTGAAATTATGAAGCAATAGAGTGGAAGCAA
TGCACCTCTTGTAAATTGGTTCTCAAAAGACAGTGATCGGAAAAGAAATG
TATGTTCGACGGGAAGACACCAAGAATGATCGCAATCACCTAAAACAAAG
AGTCGATGAGCGAGGAGGATGATTTTGATTGTGAGTCATTAATGTTTATG
ACCAATGAttatgaccaattattaaattTGTTTCCAAAAATGATGTGACA
TTGAAACGAACTAACGAATACTTCATGCAAGTGTGAACTTTAAATACCCA
AATGGTACGTTATAACTAATTGGCTTTGAGAATacttttaatgaattttg
gGGGTCAGTTACTGTAGCCTTGTTGACATATCATATAAGACTATCAATAT
GAAAAATGTTCACTTTGAGACAGATAACACGACAGCTTTGGCTTACCTAG
TGAAGTTTTTTTATGGAGAAGAGTCAAGATCTAATTGTGATATCTAAGCC
ctaaggaaatttgaaaatttgctctAGAGAGAGAGATTGCATCAGAATAG
CTCCTAGGTCAGGTAGAGTTTTGCAGCAGATTGGGAGTCCAGAGATTTTT
ATGACTTAAGTAGCTTTTGTCCCCTCAAGTCTTCCGGAAGATTTGTCATC
AGTTGGTAATTCCCTCAATAGATCTTGCCTCCAGGGTTTGTCATCAACTC
CTATTCTTTGAGCCTTGGAAGCCCGACCCAACAGCGGTAGATGCTTTGCA
AATAGAGTGAAAAACTAGGAGTTtgactagactggagtcgtttataatgc
atgcaaaatactaataataaacacaaataatgatacgggatttagtttgt
ataaacgactggaagaatccggtgttccagccttatagataccgggccta
gctacgcagaaacttgcgtagcgagaaaacaatttattaagcaacaacaa
actctcaaaataaaatcaactcaaattaaacatttttaacacacaaatcc
acacacattttattttcaagaattttttttgagcgagaagaaaatttaat
tgcgatattgacactttttttttgtttggagttagtgcacaaaggtttct
agacgactaaaatttacttttttgctttatttctaatatGTCTTAATTAG
TCGTCTAGCTTGCTAGACTAGAGTCTGACTTATGCATTACCCACATTTTG
TCTGATAGGTCAAGTTGTCAGGAAGATAAGGGTGGAGGAAACATTCATAA
ATCTAAGTATCCCCACATTATCCAGGTCAATCAATGGGTGTTAGCTGACA
ATTTTACAGTATTCTAAGTAAGAAAGTTAGTTGTGAAAGAAAATCCTACA
ATATATAAATAGAGAAAAGAAGAAGGATGATGATAATGTTGCTTAAAAGT
CCGACAGTGGGAGCACGCGTATACGTTATGATAGTCTAATACGATATTCT
ATTCCCCTTGAACTTTTCTTGAGCACTTTGTGACTCTCACTTATATCATA
AACACCTTCAGTCAGCCGCActcaaacaaaatatttctacaAACAATAGA
ATCAGAATTTGAAGGATCAGACATTCCTACCAAGCGCATGCGCACCCATA
AATTCATCATCGAACAGCCAACCACTTTTCTTGTCAAAAAGATATGCTTC
ATCAAAGCAAATGATTCATCACTCGCATCACTTTTGTCTTTGCGCCTCGT
ACCTCGACAAGAAACTTGAACAACTAGACAACTCTAGAAATTAAATCACA
AAGAAGAGGGACCACTCACACATAAATTTGACTGGAGCCATTCAGTGTTC
CATCAAGGTACAGGCTTGACTGAATGAACTTGATTGTGGAGGATTAAAAA
TCCCGTAAACAGCTGTGGATGATGTTAGTTCCATTATGTATGACACTTCT
TGTTGACGTCCTTCAAGCTGTTGTGTATCTTATCCTTCGATAAGATCACG
CAACAATGATGAAGCTCATTACGTTTTTTTAACAATTGtggataaaaata
taaacaatgaaaatgataTTGAATCTATCTGTATGGAAGCCGATCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014515-exon-sc0000188-1491911889:61676..64623 | TCONS_00014515-exon-sc0000188-1491911889:61676..64623 | Clytia hemisphaerica | exon |
| TCONS_00014515-exon-sc0000188-1510915933:61676..64623 | TCONS_00014515-exon-sc0000188-1510915933:61676..64623 | Clytia hemisphaerica | exon |
| TCONS_00014515-exon-sc0000188-1575043694:61676..64623 | TCONS_00014515-exon-sc0000188-1575043694:61676..64623 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000188 | supercontig | sc0000188:61676..64623 . |
Blast
The following BLAST results are available for this feature:
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