TCONS_00014500 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014500
Unique NameTCONS_00014500
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1996

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014500 ID=TCONS_00014500|Name=TCONS_00014500|organism=Clytia hemisphaerica|type=transcript|length=1996bp
tggatgggaaaaaTTGTGGTGCGTCTCACAGCAGACCGAGAatactacct
TCAAAGCATTTTGTAAATTCATCGTTAGGCTGATggaatttaatgttatg
tttaccGTAAGCAGCCCGCGTGTTCACCTATCACCTTCAAAGGAATTGAG
ATATAGAAGATGTCATGTCTAAGTCAAGCACAAGCAGTCCACTAAAGCTT
AACAGaacatttgcaaaaaatatcGTAAAGCACACAGATGACAATAATAG
GATAACATCCAATATCCAACAAACTAATCAACGTAAATTTGTAAACCAAG
AGAGGAAAAAACATACTAAATTACAATTGAGTGCTGAAGGAAAATCAACA
AAGCAAGGGAAAACTATGTACAGTGACTACGTTACAGAAAAGCTTTctga
aaaaactcaaaagaaGGGCATCATTCATCCATTGGAACAGATGAAAAAGC
TTGTCAAAGATGCTGCAGAATTTGATAATACAATGTCagagaaagaaatt
caaaaactgAGTGGCACTTTCATACCATCAAAGCGCCCTAAAATTATTCT
TGATAAGACGCTACTGCATAATCACTTGAAGCATACCAGCGTGCACAATA
GATTGAAAGAAGAAGGTGAAATGTGGGAGAAATTTCAAGTGGAAAAGAAG
cgCACAAAGCTGCAGTCAAAGTCTTTAAAGGCTCCAATAAGACGTGGTGG
CATGTATGCTGACTCTGAACCAGGGGCAAGTCTCACTGTCAAATTACCAG
AGAAAGAAAGATCCATCAAAAAAGAGAGATCAATCAAAAAAGAGAGCAGG
AAAAGTTTGAAACGGACTGTTATTAGAACTGTCACTTCTAATCAAGAACT
TTCTCGTCGTAAAGTGAAGAGACCTGTTCAAACCATTGACATTCCATCAA
GTAATGATGAAAGCAGTAACCAAAATCAACCTGTTCAGGGAAAGCGTAAA
GTTAGTAGAATCTCATTGAAAACAAAAGAGGCCAGCTCTCACAAAAGAAA
CGTCATCATTGAAGATGTCCCacttaaaaagaagaaaaccgAGCCTGCTA
TTGTAAGAACGTATGGTAAATTGAATGCAGATATGATTGATGAAAGACCT
ACATCTCAAGTCTCCTCTGAGAAATGGGGCCATGATGGTTTTTTCGAACA
AGAGAAAACGCCAGTTAAAAAGATAAGTATCGTTAAAAGAAAACCGATCA
CCGTGTCGGATGATGAAGCGAACGAGGATGATTCAATTCACAAAACAAAA
GCACGACATATCCTCAAAAGTAGTATCCATGTTAAACCAGCAGTTAAAGA
AAAGTCTGTTGAGCGACAAACAGAGAGACCGAAAGTACATAGAACAATAC
AAAAGAAACCAACAAGAGAAACAACCTTAGTGAAAAGGAAAGAACGAAAA
CAACGCAGTCAAAGTTCTTCTTCGTCTTCATCTTCTTCGGCATCAGGCAG
CTCTTCAAGCAGCAGTAGTAGCAGTGATAGTGATAGTGGATCCTCTTCCA
GCCTCACCAGTAGCTCATCTGATGACGAAGATGAAAAACCTACAAAACGT
AAACAAACCGTTGCCAAGCAAAAAAAACCTGCTGTCAAACATAGGCGCAA
TAAAGTGAAAAACACTTTCTCTGATTACGACAGTGACTTCCAACCAagaa
aatgatttcttttttttattcagactttgtatttgtaatttttcataatt
gtttTGTGCTTCTTTTAAAGGGTTTACCACCTATCAATCTGACTTATAGA
ACTAGTAATCACTAACGCAAAGTAGTCCTCTagagttttttatttgttat
cATTTATAGGAGATTTTATGTGGCAATTTTATAGTTTTATTCCTGTCTAA
TTAATCTGTTATGAAAGTTATTTATTTNCAATTTTATAGTTTTATTCCTG
TCTAATTAATCTTTTATGAAAGTTATTTATTTCTCCAGAGAGCCCTGTTG
AATTTCTTAATTCACTAACTTTACTGCATCATTATTAAACTTTCCC
Run BLAST on NCBI

protein sequence of TCONS_00014500-protein

>TCONS_00014500-protein ID=TCONS_00014500-protein|Name=TCONS_00014500-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MSKSSTSSPLKLNRTFAKNIVKHTDDNNRITSNIQQTNQRKFVNQERKKH
TKLQLSAEGKSTKQGKTMYSDYVTEKLSEKTQKKGIIHPLEQMKKLVKDA
AEFDNTMSEKEIQKLSGTFIPSKRPKIILDKTLLHNHLKHTSVHNRLKEE
GEMWEKFQVEKKRTKLQSKSLKAPIRRGGMYADSEPGASLTVKLPEKERS
IKKERSIKKESRKSLKRTVIRTVTSNQELSRRKVKRPVQTIDIPSSNDES
SNQNQPVQGKRKVSRISLKTKEASSHKRNVIIEDVPLKKKKTEPAIVRTY
GKLNADMIDERPTSQVSSEKWGHDGFFEQEKTPVKKISIVKRKPITVSDD
EANEDDSIHKTKARHILKSSIHVKPAVKEKSVERQTERPKVHRTIQKKPT
RETTLVKRKERKQRSQSSSSSSSSSASGSSSSSSSSSDSDSGSSSSLTSS
SSDDEDEKPTKRKQTVAKQKKPAVKHRRNKVKNTFSDYDSDFQPRK
Run BLAST on NCBI

transcript from alignment at sc0000188:100100..109692-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014500 ID=TCONS_00014500|Name=TCONS_00014500|organism=Clytia hemisphaerica|type=transcript|length=9593bp|location=Sequence derived from alignment at sc0000188:100100..109692- (Clytia hemisphaerica)
TGGATGGGAAAAATTGTGGTGCGTCTCACAGCAGACCGAGAATACTACCG TAAGTTGGTCTAATCTCGACATCCGTCTTCTAATTTCGACACCCTTCTTT AGAGATAGGAATAATAGGAAAGTCGGAATCGGTGATTGAAAAAAGATTTA TCCTCCCTTACCACTAAGCAAATAAAATAATTTCGACCTTTTTTTAATTT TTCAGCTCTAGTAAAGGGTGTCGAATGGGCCATTCCAGTTTTTATTCGTT ACCCCCCAATGGACGACACGGAATTTCCGTAGCAAATTGCGTTCAAGAAA GTCCGGAATTTCCGTAACAAATTTACAAAATACCTATCAAAACCGTGGAA TTCCGTTACTGTAACCTAAAAAAATGTTGGAATTCCAATACTTTAATGCA AAATTAAGTAAAATTCATGGAATTCCAATACTTTCTCTTTAAAGTTTGCC TGGAATTCTGTGCCAAAATTTATTTCAAAAATTGATGTCTTCCATTAGGG GGTAATTTTTTTTTTCTGGAATGGCCCAATTTAGAGGAGGGATGTCGACA TTAGACCAAGTTACGGTATATTTTTTAAATAATTTGAATACTGTGTTATA TTAAAAGTAAGACGTAGATCACAAATAAGTTGTGTTGGCGTTGTCCGACC GACTAACTTTCTATCTTAAAAATCAGACATTTTTCAGTCGGAAAAGTCGG AAATCTATCGGATTTTTTATCAATATTTTTCAGTTCAAAGCATTTTGTAA ATTCATCGTTAGGCTGATGGAATTTAATGTTATGTTTACCGTAAGCAGCC CGCGTGTTCACCTATCACCTTCAAAGGAATTGAGGTAAATTGGATTCTAA TTTAATCGACCACCCGTCGAACGCAGTCGAACGTAATCAAACATCAATCG AACGTAATTGAACATCAATCGAACGTAATCGAATATCAATCAAATCAATC GAATTTTACCCAGAATTTTACGTTCGAATGATATTCGATTCATTCGACAA TCGAATCGCAATCATTCGAAAATGTGCGCGCGGTCGACTAAGTTACTATA TATCGCTCAACCATTTTCAAAATCCTAAGTTCGTGTATGACTACATGACA TCAATTTTCGTATCAATTTTTAAATCCTCGGATCACTCCGATCGCAAGTG AAGGATCCTCAGTGCTTTATATTTTAAATAATGAGATTGCTCCAAAACGA AAATCTTCCAACCCCCGGACCTTATTTGTTATTAGGACCCCCATCGTTTA TTTAAATTTGTAAAAATATTTTCAGCTGACAGAGGGAAGGAAGGCTCCTT ATTTTGCTCTATAAAGCCTGATTTTAGCTTATTTTTGAGTTTCTAGAATT AAAATTTCAATTACCTAATTTCAACAGACAATTAGCCCTCCCCTTATTAA GAACCTAATAAGAGTTAGGATACAGTTTGTTTGTTGGTTCTTGGTTTTAA CCATAGACATTACTGTGGTTTAATTGTGAAGACAAAATTTCAAGGCAAAG AGTTTCATATTCAAGTTAAAATCTTCATACAGTACTTAACAACAACAGAC AGGCCTGTCTGAGAAAAATAAATCAAAAACAGTCGAAAAGATGACTTTCG GAGTAGGGAGTGTCAAAGACAAAGGGAAAGGGGGAAAACGCAACAAAAAT ATTTTCAGATAAACTTTTAATTTGGAGTTCTTCCATAAAATACACCAACA TCAAATCTGATGATCTATAAGAAATTTATAAAACTACTTGACATGATCCA AATATTTTCAGCTTTTGGTATTGTCCGTGTGAAGCCAAACAGTTTTTCAT CACTGCATACAAAAAATTTGAGATTCTTGAATGTTTGCCAATATGCGAGA TTTCTGATAATATAATATGGGAAATGTAACTGAATGTAATGTCTTGTATT TAAAAACCATATGACGAGCGATATTTATAAAAGTTTTCTCCCAATTCTCT TGTTTGCGATAAAGGTCCTTGACTTTTTAAGCATCTCAACATACAACAAT CATTACGGCTTGACGATAATCAAGAAATTATTCACATTGTTTTACTGTTT CAAAAATGTTGTCTTTTTTAACCATTATTATAACCAACGCATACGTTTCA ATCATGGAACTCCTTTCCTCTGCTTTTCTTTTCCATGAATATCGAAACAA AAACATAGGTAGAAAAGGAATCAGTGCTTTCAATCTGAATAATCCAATGA TGAAGGGTGGTTTCTTCTCTATCGAAATAATACTGAACATCATCTGCATT TTCAATTATCAATCTAGAAACTTTCAAATACATCTCTGAAAAATTTGCAA CACCCCTCACTACGAAACAAAACTTCTGGGATCGAAAAATGCTTCTCTAT TTTGTAAAAGTCAAAAGATGCAAACCAGGCCATATTTTAGAAAGGCAAGG CAGCGTCCATTGGTGGCCAAAAAGGGCACTTTTTCCTATGTTGTTCCACT AAAAAGGCAGTTTTTACCAATATTTTAGTAATTTCAGGAGGGGCAGCGTC CGGTAACCGGACGCTTAAAGAGCATAAAGAATGGCCTGCAAACATCGAAT ATTTTCCAAGAGTAAGGCCTAAAAGCCTGGAGCTGTCTATTGTGTAGACC TGGGCCCGTGCAATACTTGATTTTCGGGATTTTTTTAAATTTTTAGAATT TTGGTATTTTGGAATTTCTTTTTATGTTCCCTTTGGCCAATGTGTTTTTA AGATGTTTAGACTCTATAGATCCTGAGGCTGTTGTAAAATTTTCCGCCGG GGATAAAAAACCAGGTAAATAAAAGTTTTGTCAACTGGGAAAAATGTTGT TGCCTTAATTCTTATAATTTTCGTCACTTTCAAGTTTCACCCGATATATT TACCCAGAAAAGGCACTCTAGTTTTGCCTAACAGATTTCCCGCAAAAAGA ATATTCAATTAAAAAGCTGTTGTTTTCACCTTTCAATAGTGCTTCTCAAG ACTCTACACTCTAAATATTTGTGAGGTTAACTAGCAAATCAGCATAATCA CGAAAACGGCCGAAAAATGAAACAGGCTAGTGAGTTTCAACCAATAAAAT AACGTATTTTCACGAGCCTTAAATTTTTCGCCAATCGTCGTGATTATCCT GGATTACCTCAGTATCATTTTCAACGCAAACAGAGTGGAGGAACGTACTT AAGCGTTCTGGAGCGCGCATAACCCCTTTTTCTAAACATTGATTTTTCAA AGATTGTTTGCGTTATAAATTGCTATGCCACTGTTTTTTGCAACCGTGAT ATGTAACAAGGATCATAATGCAGCTAGTGCGCTTGATAATTCTTGCCGTG CGACAAACCTATTATATTCAGGGCGCATTTTTCCAATGATTCTAGTGCTG ACCGACTGCCTAGGTTCAGAGCGCACTTTTCCAACGATTTTAGTGCCGAC CGACCGTCTCACTTTTTGGGGCTGGAAATGACGCGAAGTAGGAAGTAGTC AGAGACAGAGAGCAGTTTACGACTAAAACTCATATGTCAAGATTACAGGA TTAAGAGTACGTGCTGATTTTACCTTTTTTCATTGGTTTCAATTCAGTTT TGGTTTATGGCCAAAATCTTAACAAGGCCGTTTGTAAAAAAAGTTTGGTT CCCGTCCACCAGACCAACCGTGATTTCTACTGAAAAATTAGGAAACCATT TTGCGTGACAGCTGAAACTCTACCATCATCCTCCATGTTTTCTCTTTTGA GAGAAAGAGCAAACGCTAATCCAGGTCTTGACTGCTGAATCTCATCCCAC GCATGCGCTCTTAAGGGGATAGACCCGCAGGATTATATGCCTTAGCAATG ATGATGGGTTATGAGATTAACGCTAATCTCGCCCAAAAAACAATTCAAAA CCCGTTAATTCTATTTTTTCCCAATTTTCAAGTCAGATTTTTCATTGTCG ACTATATGGAAGCATCAAAACAAACCAGTGGAGCTTTTAAGTAGTGAAAA AGAGGCTTAGGGCGATCAAACGTCCGTTTACTGCCTTTTTCTAAGGAAAA TTCCGCCCTCTCGGACATTTTGTTCAAACAGAAAATATTTTTCGCCCAAC CGACCGACCGGCCGACCCACTTTTTTATGGTTGGAATGACGGGAACCAAG GGATTTTTTACGAACGGCCCAACGGGGCCCATTGGTTGGGTTTTTGAGTG GTTTTTGGTGTTTGTGTTTTTCTGCTTGGCTTTTTAAACTTTATGTCTAT TGGTTTGTTGGTTCTTCTTCACATAAAATTCTCATTTCTTGACAGAATGT TTGATTGGTTTGATTTATATATTTAGAAAAATTCAAAAAAATGGAAAAAA AAACGTATAATTATAAAAATATTAGTGCCTTTTTATGTTATATACATCTT TATTTTATTTAGTATTTTCAACACTTTCTCTCCTTGAGGTCAGATCTCTG ATCTTCACCATATATATATGTATATTATATATATATCCATATAGTATTAT TATGGTTACAGGGCAGGGGTGTCCATCCGGTAGAATGTAAATCACTAGCT ACCAATGCTGAAATCTTTTTCACTCTGTCGAAACGTCTAGACGGGATACC TACATGGTGGTTCCATTAGGATAGCGGCCCTCTTTTAGAGGGGCACTTTT ACCACCCTGTGTCTAAACATTAAAAGGGCACCGGTATTATTATATATAAT AAGAGCAGCAAAGTCCAAATATAAGCATCTTTCTGATTTTTTTGTAAAAA TTCAAGAAAGAACACAAGATGTTGTGTAAACAGAATATTTCGATGTATTA ATCACATCATTATCAACTGAATTATTATGATATATTATGGTCCATCTCAG AGCTTGGGAAATATCATGTGTTTCCATTTCAAGAAATCAGTCAAGAATCA ATACACAATCTCTTTTGCTTACTATTTACCGTAAGTTGGTCTAATATCGA CATCCCACGTCTAATTCCGTTTTTTGGTTTTTAGTATCCTAATTAGGATG TTGATTGCTATTTTGGACACTTTTTTGTATCCAATTTAAGATACTCTCCT AAGTAGGAGAGATTGCCGAATGTATCCTAACTTGCACTTGATCTTGACTG GAAATGACTTCATTCAAGTCATTGATGAAGCAAGCAATCAACAAAAGAAA CCAATAAAAGATCAAAGAGAAAAGCCATAAGTGGGAAAAAATGATTGTTT GCCAATCTTAGGGATTTGCCAAACTCAACTAGAATTTCTGTCCAACTATC TTCTTTCATGAGATTCGGGTGGCAGAGCAGCATATGCATTATACCCTTAT TTCCTCTGTCTAAGAGTGTAATAGTGGGCTAGCAGTGGTGCAGCCGAAAC AGTTGTGAAGAAGGCGTCTAGGTGTTTTTGAATATTTCTTTGGGACAGTT TGTCAAATCTCTTCCAGATATTTTTGTTTGTAATGTTAACAGCTTTGAGA TTGCAAATACTCGCCAATCTCTGACTTTTATGGCAGAAAATGTCTCCTTT TCTTTTGTCAAAATTTAAATTTGGGACCTTTCCTTCGATGACGTTCCAGA AATTATATTGATACTCTCTCCGTCTTTCGAGGCTGTACAATTCCAATGAT TTTAGTGTTTCCCAATAGCTGAGATGTCTGAGACATGAAATACCATGTTG GAACGAAAATCAGGCAAACCTTTGCTCTTTTGAACAAGTTTAGTGCTTTT TTTTTTAATAAAGTAGGCTTACTTACTACTAAGGCTGATTGTGAAAAATC CACAGGTAGGAAATTAAAATCCTATGGTGAAAAGTTTACTTTTTGATTGG ACTACAAAATGCGCATGATTTTGACACCCGTTCAGCTCTTCCACCGGTTC TTGGTTCAAAGACTGGTGTTGTCAAATTTGCAGCAGGAAAACTGGGATAT TTGACAACGTTGCAGAATTCAACAGCACTAAAGTTGCAACGCTGTCATTC TATTGAATTTTCCGAGCTGTTACCGTACTTAATTACCTATAACAATCCGA AATTATCCTTCAAAACAATCAAATTGATCTGATTGGTTGAAACTTAAAAA GTATTATAATTATTGATCTAAATGAACCAATCAGTGCTCAAAAAAAGGGT TTGATTATTGAGGGAAATTTTGGAATGTAATAGGTAAGTACGATAATACT GACTACCTAATCTGTTTGGATATTTTCCAGACCAGAACTCCTATTTACCT ATGCAAAATCTTTATTCTAAATTAATTTACTTGGCTTGTAATTTGAACAG TATTTACATAAACTACTTCAAATAGGCTATTTTAGAATAATTATTAGAGT ATTTACATTGTGTATTTGCCTTCATAATTCCAAGCAGTTTTGAAGTATTT TATTGTATACAGTAAGTAGTCAGGTATTTTTTGGCTATAACTTTCTAAAC AACTGAGTGAAGAAAAATGAAGGAGAAAAAAAAAAGAACCTTCTTGTTGT AGAATAGAATCATTGGTATCCTTGGCAGAACAGTGCTATATCCCATCAAT TACCATGGCTTCAAAATTCTTTAAAGGGTACCTTGTGAGTTCAGCAGCAA CCCAAGACTACACTGAAAAATTCACTCAATGTAACTGGATAACCCAGCCG ATTGACTGAGCCCTGGCCCCACGCACCTGGGGTAGCCAATTCGAGTCTAG TCAGGGTCCAAATTTTTCAAAAGGCATAAGAGACTACCCAAGGAGACATG TACCAGACCCCCCCCCTAGCTCAAGATTGGGAATTTTCTGGAGATGTTAG TCATATCTACAGGAGAAGGCATGTCAAATTTCAAGCTCCAACCGCCCATG GTTGACGAAGAATTAAAACAGAAAATTAAGGTGCTGGTCGACCTTGGCCA ATTAATTTCAGAACTTATTCAGACACTTTATCCCTCTCTTTTCATGCGGT CAAAGTGGTTGAGGTCATTCTCTACCATCTCGAAAACAAGTCTGCGAAAT ATCTAATTCAAAGCAAAAAAGATTGGTGAAACGGCATCTCTTTAGATTTT CCGTTGAGTCCATTTTGTTGATCTGGGCTCTGCTGGGCTTTAAACCTTTA CACAAAAACCAGAAAAATTGAAAACGCTGTGGAATCACTCCAGGTCAATT TGTCCATCCTGTACATGCACCTGAATTTTATGCACAGTTGCATAAATATT TAAAAAGTTACCAAAATCGTTTAGGGAGGGGGCCTCAATTTTTTTTACAT TANAGTTGCATAAATATTTAAAAAGTTACCAAAATCGTTTAGGGAGGGGG CCTCAATTTTTGTTACATTTTTAACTTTTATGTTTTTTTCCTTTAGATAT AGAAGATGTCATGTCTAAGTCAAGCACAAGCAGTCCACTAAAGCTTAACA GAACATTTGCAAAAAATATCGTAAAGCACACAGATGACAATAATAGGATA ACATCCAATATCCAACAAACTAATCAACGTAAATTTGTAAACCAAGAGAG GAAAAAACATACTAAATTACAATTGAGTGCTGAAGGAAAATCAACAAAGC AAGGGAAAACTATGTACAGTGACTACGTTACAGAAAAGCTTTCTGAAAAA ACTCAAAAGAAGGGCATCATTCATCCATTGGAACAGATGAAAAAGCTTGT CAAAGATGCTGCAGAATTTGATAATACAATGTCAGAGAAAGAAATTCAAA AACTGAGTGGCACTTTCATACCATCAAAGCGCCCTAAAATTATTCTTGAT AAGACGCTACTGCATAATCACTTGAAGGTTAGTTAGATATGACAACTACA CTTAAAAATAACACTTTCTGTTTTTCAAATGCTACTTACTTATAAGGAAA ATCTTTTTAAAAGCTTTCAAGCCAGGGGAAAACATGGATTAGATTGTTTA ACTTTGAGAGATTGTATAAAAATAAGCTTCTAAGTGGATTGTTAGTTGTA CATGTTTTTGTTTTCCATGTTAGCATACCAGCGTGCACAATAGATTGAAA GAAGAAGGTGAAATGTGGGAGAAATTTCAAGTGGAAAAGAAGGTGAGTTT TTGGACCAACCTGTCGTTCGTTCGTTCGTTCGTTCGTTCATTTCTTGAAT TTCTCGAGCTGTACTTTATATTTTTTTATGAAATTTTGCACACTGACGCA AAATGACTATACCTAAAATGTGACAGAGCCCGATTTTCAAAATTTTCTGC CAAAAAAATAATCTGTTGATGTTTACAATTTGACCTTTGACCGAGTAATT TAAAAGCATCTGAAGTTGAGCCAGTGCGGTTAGTTAGATATCATATTGAC AAATAAATCATTCAAATCATACAAAAGTAGCCCTTTTTTCATTTTAGCGC ACAAAGCTGCAGTCAAAGTCTTTAAAGGCTCCAATAAGACGTGGTGGCAT GTATGCTGACTCTGAACCAGGGGCAAGTCTCACTGTCAAATTACCAGAGA AAGAAAGATCCATCAAAAAAGAGAGATCAATCAAAAAAGAGAGCAGGAAA AGTTTGAAACGGACTGTTATTAGAACTGTCACTTCTAATCAAGAACTTTC TCGTCGTAAAGTGAAGAGACCTGTTCAAACCATTGACATTCCATCAAGTA ATGATGAAAGCAGTAACCAAAATCAACCTGTTCAGGGAAAGCGTAAAGTT AGTAGAATCTCATTGAAAACAAAAGAGGCCAGCTCTCACAAAAGAAACGT CATCATTGAAGATGTCCCACTTAAAAAGAAGAAAACCGAGCCTGCTATTG TAAGAACGTATGGTAAATTGAATGCAGATATGATTGATGAAAGACCTACA TCTCAAGTCTCCTCTGAGAAATGGGGCCATGATGGTTTTTTCGAACAAGA GAAAACGCCAGTTAAAAAGATAAGTATCGTTAAAAGAAAACCGATCACCG TGTCGGATGATGAAGCGAACGAGGATGATTCAATTCACAAAACAAAAGCA CGACATATCCTCAAAAGTAGTATCCATGTTAAACCAGCAGTTAAAGAAAA GTCTGTTGAGCGACAAACAGAGAGACCGAAAGTACATAGAACAATACAAA AGAAACCAACAAGAGAAACAACCTTAGTGAAAAGGAAAGAACGAAAACAA CGCAGTCAAAGTTCTTCTTCGTCTTCATCTTCTTCGGCATCAGGCAGCTC TTCAAGCAGCAGTAGTAGCAGTGATAGTGATAGTGGATCCTCTTCCAGCC TCACCAGTAGCTCATCTGATGACGAAGATGAAAAACCTACAAAACGTAAA CAAACCGTTGCCAAGCAAAAAAAACCTGCTGTCAAACATAGGCGCAATAA AGTGAAAAACACTTTCTCTGATTACGACAGTGACTTCCAACCAAGAAAAT GATTTCTTTTTTTTATTCAGACTTTGTATTTGTAATTTTTCATAATTGTT TTGTGCTTCTTTTAAAGGGTTTACCACCTATCAATCTGACTTATAGAACT AGTAATCACTAACGCAAAGTAGTCCTCTAGAGTTTTTTATTTGTTATCAT TTATAGGAGATTTTATGTGGCAATTTTATAGTTTTATTCCTGTCTAATTA ATCTGTTATGAAAGTTATTTATTTNCAATTTTATAGTTTTATTCCTGTCT AATTAATCTTTTATGAAAGTTATTTATTTCTCCAGAGAGCCCTGTTGAAT TTCTTAATTCACTAACTTTACTGCATCATTATTAAACTTTCCC

Coding sequence (CDS) from alignment at sc0000188:100100..109692-

>TCONS_00014500 ID=TCONS_00014500|Name=TCONS_00014500|organism=Clytia hemisphaerica|type=CDS|length=4473bp|location=Sequence derived from alignment at sc0000188:100100..109692- (Clytia hemisphaerica)
CGCACAAAGCTGCAGTCAAAGTCTTTAAAGGCTCCAATAAGACGTGGTGG
CATGTATGCTGACTCTGAACCAGGGGCAAGTCTCACTGTCAAATTACCAG
AGAAAGAAAGATCCATCAAAAAAGAGAGATCAATCAAAAAAGAGAGCAGG
AAAAGTTTGAAACGGACTGTTATTAGAACTGTCACTTCTAATCAAGAACT
TTCTCGTCGTAAAGTGAAGAGACCTGTTCAAACCATTGACATTCCATCAA
GTAATGATGAAAGCAGTAACCAAAATCAACCTGTTCAGGGAAAGCGTAAA
GTTAGTAGAATCTCATTGAAAACAAAAGAGGCCAGCTCTCACAAAAGAAA
CGTCATCATTGAAGATGTCCCACTTAAAAAGAAGAAAACCGAGCCTGCTA
TTGTAAGAACGTATGGTAAATTGAATGCAGATATGATTGATGAAAGACCT
ACATCTCAAGTCTCCTCTGAGAAATGGGGCCATGATGGTTTTTTCGAACA
AGAGAAAACGCCAGTTAAAAAGATAAGTATCGTTAAAAGAAAACCGATCA
CCGTGTCGGATGATGAAGCGAACGAGGATGATTCAATTCACAAAACAAAA
GCACGACATATCCTCAAAAGTAGTATCCATGTTAAACCAGCAGTTAAAGA
AAAGTCTGTTGAGCGACAAACAGAGAGACCGAAAGTACATAGAACAATAC
AAAAGAAACCAACAAGAGAAACAACCTTAGTGAAAAGGAAAGAACGAAAA
CAACGCAGTCAAAGTTCTTCTTCGTCTTCATCTTCTTCGGCATCAGGCAG
CTCTTCAAGCAGCAGTAGTAGCAGTGATAGTGATAGTGGATCCTCTTCCA
GCCTCACCAGTAGCTCATCTGATGACGAAGATGAAAAACCTACAAAACGT
AAACAAACCGTTGCCAAGCAAAAAAAACCTGCTGTCAAACATAGGCGCAA
TAAAGTGAAAAACACTTTCTCTGATTACGACAGTGACTTCCAACCAAGAA
AATGACATACCAGCGTGCACAATAGATTGAAAGAAGAAGGTGAAATGTGG
GAGAAATTTCAAGTGGAAAAGAAGATGTCTAAGTCAAGCACAAGCAGTCC
ACTAAAGCTTAACAGAACATTTGCAAAAAATATCGTAAAGCACACAGATG
ACAATAATAGGATAACATCCAATATCCAACAAACTAATCAACGTAAATTT
GTAAACCAAGAGAGGAAAAAACATACTAAATTACAATTGAGTGCTGAAGG
AAAATCAACAAAGCAAGGGAAAACTATGTACAGTGACTACGTTACAGAAA
AGCTTTCTGAAAAAACTCAAAAGAAGGGCATCATTCATCCATTGGAACAG
ATGAAAAAGCTTGTCAAAGATGCTGCAGAATTTGATAATACAATGTCAGA
GAAAGAAATTCAAAAACTGAGTGGCACTTTCATACCATCAAAGCGCCCTA
AAATTATTCTTGATAAGACGCTACTGCATAATCACTTGAAGCGCACAAAG
CTGCAGTCAAAGTCTTTAAAGGCTCCAATAAGACGTGGTGGCATGTATGC
TGACTCTGAACCAGGGGCAAGTCTCACTGTCAAATTACCAGAGAAAGAAA
GATCCATCAAAAAAGAGAGATCAATCAAAAAAGAGAGCAGGAAAAGTTTG
AAACGGACTGTTATTAGAACTGTCACTTCTAATCAAGAACTTTCTCGTCG
TAAAGTGAAGAGACCTGTTCAAACCATTGACATTCCATCAAGTAATGATG
AAAGCAGTAACCAAAATCAACCTGTTCAGGGAAAGCGTAAAGTTAGTAGA
ATCTCATTGAAAACAAAAGAGGCCAGCTCTCACAAAAGAAACGTCATCAT
TGAAGATGTCCCACTTAAAAAGAAGAAAACCGAGCCTGCTATTGTAAGAA
CGTATGGTAAATTGAATGCAGATATGATTGATGAAAGACCTACATCTCAA
GTCTCCTCTGAGAAATGGGGCCATGATGGTTTTTTCGAACAAGAGAAAAC
GCCAGTTAAAAAGATAAGTATCGTTAAAAGAAAACCGATCACCGTGTCGG
ATGATGAAGCGAACGAGGATGATTCAATTCACAAAACAAAAGCACGACAT
ATCCTCAAAAGTAGTATCCATGTTAAACCAGCAGTTAAAGAAAAGTCTGT
TGAGCGACAAACAGAGAGACCGAAAGTACATAGAACAATACAAAAGAAAC
CAACAAGAGAAACAACCTTAGTGAAAAGGAAAGAACGAAAACAACGCAGT
CAAAGTTCTTCTTCGTCTTCATCTTCTTCGGCATCAGGCAGCTCTTCAAG
CAGCAGTAGTAGCAGTGATAGTGATAGTGGATCCTCTTCCAGCCTCACCA
GTAGCTCATCTGATGACGAAGATGAAAAACCTACAAAACGTAAACAAACC
GTTGCCAAGCAAAAAAAACCTGCTGTCAAACATAGGCGCAATAAAGTGAA
AAACACTTTCTCTGATTACGACAGTGACTTCCAACCAAGAAAATGACATA
CCAGCGTGCACAATAGATTGAAAGAAGAAGGTGAAATGTGGGAGAAATTT
CAAGTGGAAAAGAAGATGTCTAAGTCAAGCACAAGCAGTCCACTAAAGCT
TAACAGAACATTTGCAAAAAATATCGTAAAGCACACAGATGACAATAATA
GGATAACATCCAATATCCAACAAACTAATCAACGTAAATTTGTAAACCAA
GAGAGGAAAAAACATACTAAATTACAATTGAGTGCTGAAGGAAAATCAAC
AAAGCAAGGGAAAACTATGTACAGTGACTACGTTACAGAAAAGCTTTCTG
AAAAAACTCAAAAGAAGGGCATCATTCATCCATTGGAACAGATGAAAAAG
CTTGTCAAAGATGCTGCAGAATTTGATAATACAATGTCAGAGAAAGAAAT
TCAAAAACTGAGTGGCACTTTCATACCATCAAAGCGCCCTAAAATTATTC
TTGATAAGACGCTACTGCATAATCACTTGAAGCGCACAAAGCTGCAGTCA
AAGTCTTTAAAGGCTCCAATAAGACGTGGTGGCATGTATGCTGACTCTGA
ACCAGGGGCAAGTCTCACTGTCAAATTACCAGAGAAAGAAAGATCCATCA
AAAAAGAGAGATCAATCAAAAAAGAGAGCAGGAAAAGTTTGAAACGGACT
GTTATTAGAACTGTCACTTCTAATCAAGAACTTTCTCGTCGTAAAGTGAA
GAGACCTGTTCAAACCATTGACATTCCATCAAGTAATGATGAAAGCAGTA
ACCAAAATCAACCTGTTCAGGGAAAGCGTAAAGTTAGTAGAATCTCATTG
AAAACAAAAGAGGCCAGCTCTCACAAAAGAAACGTCATCATTGAAGATGT
CCCACTTAAAAAGAAGAAAACCGAGCCTGCTATTGTAAGAACGTATGGTA
AATTGAATGCAGATATGATTGATGAAAGACCTACATCTCAAGTCTCCTCT
GAGAAATGGGGCCATGATGGTTTTTTCGAACAAGAGAAAACGCCAGTTAA
AAAGATAAGTATCGTTAAAAGAAAACCGATCACCGTGTCGGATGATGAAG
CGAACGAGGATGATTCAATTCACAAAACAAAAGCACGACATATCCTCAAA
AGTAGTATCCATGTTAAACCAGCAGTTAAAGAAAAGTCTGTTGAGCGACA
AACAGAGAGACCGAAAGTACATAGAACAATACAAAAGAAACCAACAAGAG
AAACAACCTTAGTGAAAAGGAAAGAACGAAAACAACGCAGTCAAAGTTCT
TCTTCGTCTTCATCTTCTTCGGCATCAGGCAGCTCTTCAAGCAGCAGTAG
TAGCAGTGATAGTGATAGTGGATCCTCTTCCAGCCTCACCAGTAGCTCAT
CTGATGACGAAGATGAAAAACCTACAAAACGTAAACAAACCGTTGCCAAG
CAAAAAAAACCTGCTGTCAAACATAGGCGCAATAAAGTGAAAAACACTTT
CTCTGATTACGACAGTGACTTCCAACCAAGAAAATGACATACCAGCGTGC
ACAATAGATTGAAAGAAGAAGGTGAAATGTGGGAGAAATTTCAAGTGGAA
AAGAAGATGTCTAAGTCAAGCACAAGCAGTCCACTAAAGCTTAACAGAAC
ATTTGCAAAAAATATCGTAAAGCACACAGATGACAATAATAGGATAACAT
CCAATATCCAACAAACTAATCAACGTAAATTTGTAAACCAAGAGAGGAAA
AAACATACTAAATTACAATTGAGTGCTGAAGGAAAATCAACAAAGCAAGG
GAAAACTATGTACAGTGACTACGTTACAGAAAAGCTTTCTGAAAAAACTC
AAAAGAAGGGCATCATTCATCCATTGGAACAGATGAAAAAGCTTGTCAAA
GATGCTGCAGAATTTGATAATACAATGTCAGAGAAAGAAATTCAAAAACT
GAGTGGCACTTTCATACCATCAAAGCGCCCTAAAATTATTCTTGATAAGA
CGCTACTGCATAATCACTTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008110XLOC_008110Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014500-proteinTCONS_00014500-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014500-exon-sc0000188-1575043694:109644..109692TCONS_00014500-exon-sc0000188-1575043694:109644..109692Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1575043694:108859..108959TCONS_00014500-exon-sc0000188-1575043694:108859..108959Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1575043694:102016..102446TCONS_00014500-exon-sc0000188-1575043694:102016..102446Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1575043694:101751..101819TCONS_00014500-exon-sc0000188-1575043694:101751..101819Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1575043694:100100..101445TCONS_00014500-exon-sc0000188-1575043694:100100..101445Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1510915933:109644..109692TCONS_00014500-exon-sc0000188-1510915933:109644..109692Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1510915933:108859..108959TCONS_00014500-exon-sc0000188-1510915933:108859..108959Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1510915933:102016..102446TCONS_00014500-exon-sc0000188-1510915933:102016..102446Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1510915933:101751..101819TCONS_00014500-exon-sc0000188-1510915933:101751..101819Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1510915933:100100..101445TCONS_00014500-exon-sc0000188-1510915933:100100..101445Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1491911889:109644..109692TCONS_00014500-exon-sc0000188-1491911889:109644..109692Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1491911889:108859..108959TCONS_00014500-exon-sc0000188-1491911889:108859..108959Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1491911889:102016..102446TCONS_00014500-exon-sc0000188-1491911889:102016..102446Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1491911889:101751..101819TCONS_00014500-exon-sc0000188-1491911889:101751..101819Clytia hemisphaericaexon
TCONS_00014500-exon-sc0000188-1491911889:100100..101445TCONS_00014500-exon-sc0000188-1491911889:100100..101445Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000188supercontigsc0000188:100100..109692 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.53993 10.5009 7.15385 7.4351 27.6909 27.8954 14.9947 16.8583 6.4644 7.54588 10.0386 5.32451 5.52543 5.0282 3.04037 3.33939 4.28024 2.35141 3.73744 4.2677 4.48006 4.28768 8.70522 14.2749 22.0865 17.8931 5.25914 5.14395 6.91777 10.9033
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014500 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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