|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014401 ID=TCONS_00014401|Name=TCONS_00014401|organism=Clytia hemisphaerica|type=transcript|length=1878bp
atttttgccACTCGTATCCTAGATTTTGCCATTTTACATTTGGTTTTTAC
ATTGATATTGTTTTTACATTGATATATTTGAAGTTTGAAGCAAAGGCTTT
TCTTGGTTGTAAGATTCGATTTGAAGgaatttttctttgcaaaaatcTCA
ATCCTCGGTTACAGcAATGGCCGACTTCAAGAACGACATTCTTAAAACAC
ACAACACATACCGTAAAACACATCGATCCAACCCTCTCAAATGGTCCAAT
AAGCTTCAAGCCAACGCCCAAAGATGGGCGGATAAACTAGCAAAGAAGGG
ATATCTCCAGCATGAAAACCAGTCAGATGAGGGAGAAAATATCGCTTGTA
TGAAGGGAGCAGAGCTGACTGGTGAACGAGCTGCAACCATGTGGTACGAT
GAAGTCAAATATTATGATTACAGTAAACCAACATTCAGCTCCAAGACAGG
ACATTTTACACAGCTTGTATGGAACGGATCAACTGAGCTTGGTGTAGGCC
GCGCGACCGCTTCAAACGGTATGCAATTTGTCGTCGCTCGATATAATCCA
CCCGGAAACATCCTTGGAAAATTCCCAGACAACGTCTTTTCATCAAACGG
TAAACCGCCACCAACGACGTCAAgcaacaatagcaacaataacCGGACGA
CAAGAAACAAGCCTGAAAAACGGCAACAACAACCATCCAGTGATAAACAA
ACTGACAAAGATTTCAAGAATGCTGTCTTACGTACGCATAACCAATTACG
TAAGCATCACGGCTCAGGCCCACTACGTTGGAACAGTTCTCTGGCTAGCC
AAGCGTTAAGTGCGGCACAAGAGGCGGCTGAAACCAACACTCTACGCTCA
GTGGATAACAACAAAGTGGGTCAAAATATGGCAGCGATTTCCGGAGCTGA
ATTAACGGGTGAAAAAGTTTCCAACATGTGGTATGATgaggaaaagaaat
ataattATAGAGAAGCCAAATTCAGTTCAAGTACAGGAAGTTTCACACAA
CTTGTTTGGAAAGGGACAACCGATCTTGGTGTGGGTAGAGCTTTCGGACC
TAACGGACAAACGTATGTTGTAGCTTTATACCAACCAGCGGGAAATGTTA
GAGGACTTTACAGTGAAAACGTTTTACAATCACGTGGTACGAGGCCTGGG
TCCAAGAAAGAGGATCAAGGGTGTGGCTGTGCCATCATGTAACACCTTCC
AAATCAAAGATAATCTGATGTTTTGCTGACTaataggaaaaattattttc
aaaatggggACAGCTAAAAGTATGGCGATTCCTTCAAATGACAATCGCCT
TAAGTAGGCGTTCACTTTAAATGGCGGATAGCTGCCaaaagtttacttga
aatagaCGGCCATGATAGATATCGTTAAGAAAATATGATATTCTTTGAAT
TTGGGTAGAACAAAGTTCATTTTTGATGAATATTCTGAAGACTGTCAAAT
AACTCGACTCTCAAGGTTGATTTAACCGGCAGGGAAACGTTTTTCTAGCG
TTACTTTGGCTAAGGGACTAAACTTGCTTGATTTATCCTTTTTTTTATCC
ACCATTATTGCTATGAACTGTATATGTATATCCAAATGTCAGAAAATTTT
ACAAACGATCTAAAATTTTATGCTGGttcttaaaaatttagtttAGTTTT
ATGCATACAGTATAaccttttctttgaaaattcattaatattaataaaat
tgaaaacattttttgatttatgatttgaTTTATAAATTAACGGCTAATTT
TATAGCTAATGTTCTTAAGTCTGataatttttgtagatattaTGATTTTT
TCCGGAGAAAGTTAATTTTCACGGAAcctttttgtatattttatttataG
TTGATGATTTTTTGGGATAATAAATCAG Run BLAST on NCBI transcript from alignment at sc0000187:433373..445621+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014401 ID=TCONS_00014401|Name=TCONS_00014401|organism=Clytia hemisphaerica|type=transcript|length=12249bp|location=Sequence derived from alignment at sc0000187:433373..445621+ (Clytia hemisphaerica)
atttttgccACTCGTATCCTAGATTTTGCCATTTTACATTTGGTTTTTAC
ATTGATATTGTTTTTACATTGATATATTTGAAGTTTGAAGCAAAGGCTTT
TCTTGGTTGTAAGATTCGATTTGAAGgaatttttctttgcaaaaatcTCA
ATCCTCGGTTACAGGTACATCACCAtatattattttgaagaatttacTGT
AAGATTTCACTTGAACGTTTCCTAGGTAGATTTCTTTCAatataaattta
tttaaaaaattattttacccTGTTTTACCTAATCATTGCTAAGGTAATTC
TAATTTTCTAAAGTAAGGCGATTGGCATTGAGCAGGTAAAGATTCTATAG
TATCCCAGCctacacacaacgttgtttcaacgttcattaaACGTTcctta
tatggacgttgtgaacgttagataaacgttgaaacaacgttgtgtgccag
ctggaatATGTTTTTCAAAGGCAATAAACTGAGAATTCTTTATACAAATT
TTCCAAAGATAGTCAGggttttggatttcattttaCGTTTTTCTGCGGAA
ATTCAATGTTTTCCTACGTATTGTACGTACTCAACTGTTGAAAAAGTTGG
AAAGAAACTTTTTGCAGACTGAGCAGTTTTTGAAGTGTCTGATATACAAA
GCCAATGAAAAATTGACGTAAATTATCGATAACTGGATTTAAGTGCGTGT
CGAAATTCatgtgtttttgatttttcatcaaatttgcaATCGCTGGAAAA
TCAATAGGCTATAAGGTTCAgctcaacctcgttccctgtattatcagctt
ttttatgcttaatgatagtgctagataataccctggcttTGTCTGATTAC
GTAATCCAaactctggcgtcaatcagtaacgtaaataaaaccTGGGGTAC
ATGGGAACGAGGCTGGGCTCAGCTTTGTTTGATCATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttatatggacgttgt
gaacgttagataaacgttgaaacaacgttgtgtgccagctggaatATGTT
TTTCAAAGGCAATAAACTGAGAATTCTTTATACAAATTTTCCAAAGATAG
TCAGggttttggatttcattttaCGTTTTTCTGCGGAAATTCAATGTTTT
CCTACGTATTGTACGTACTCAACTGTTGAAAAAGTTGGAAAGAAACTTTT
TGCAGACTGAGCAGTTTTTGAAGTGTCTGATATACAAAGCCAATGAAAAA
TTGACGTAAATTATCGATAACTGGATTTAAGTGCGTGTCGAAATTCatgt
gtttttgatttttcatcaaatttgcaATCGCTGGAAAATCAATAGGCTAT
AAGGTTCAgctcaacctcgttccctgtattatcagcttttttatgcttaa
tgatagtgctagataataccctggcttTGTCTGATTACGTAATCCAaact
ctggcgtcaatcagtaacgtaaataaaaccTGGGGTACACGGGAACGAGG
CTTGGCTCAGCTTTGTTTgatcatgaaggtaataaaaatagatggagagt
caatgccttttgttctattctgacatatcatcggaagcaaacagttgttt
tgttgctttgggaataggATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagatca
ttttgtcagagtatgaaaaccgctgcccacttcgacgtgaagattttaag
acaggaaactttcaaagaaaatgtgatGAAACTGTCAATGTTCAAAAAAT
GTCGGCCCAAAAATAAGTCCTTCTGAAATTAATACATTCTTTTATCTTTA
CAACGGTTGAAACTACTTCGAATCTTATTTTAACAAGGATTTCtcgtaaa
attaagtttttcaaaatcaacgcaacagcctctttctgttctttAAAGTT
GTAAATTGATGCTTTTTGCTTCCGATGATGGTAAATCAAAGGAAAGCcgt
tttgaatagatttataaaagatctGAACGACCATTTAGATCATTTACGCG
acattttctctccatctatttcTTTAATACCTTCGTGGTTTGATTGACCG
ACTAGTATCGATCTTCATATTCCAGTAAAAGTAAGATCATATCTGATAAC
TGTCAACGTGAGTTGCTGTTCAGTTCAAAAGGTTTATGTTATGTTAAGGA
GGCAAATTGGGGTTTTCCAgaacaaatttgaatatgggagcgtggaggat
ataacattttttttgaaatttacccccggacatcATGACTTTTGAAACAG
AAAAATTACTACCAAACAGAGCAATTTTACCCTCCGGACAAGAcaaattt
gtagatttttcactaccccctgACACTATATGCTCCACTCCCCATGAACG
GACATCTTCTGGAAGAGCTCATTGCCACCCAGCTTCCTTAAAATGTAATA
TCGTATATAAAATTGCGACTTATACAAAGAACCAGTCGGACCACTTTCCC
AACGGAGAATTTGGCCAAAATGTTGTCCCCTGTGAGAAAAACAACCTACA
ATTTCAGCTACTAAAGTTTTTATATCCGTTGAACTTTTGATAACAAATAA
TTACGACTGTGAGAAAAGGTTCCGCCGGAGTTTTTTAAGACATAGGTGTA
AGGTTGATCTAAAATTCGTTAACTAAAGAATAAGGTCATCTTTCCCCCCG
GAATAACTTTTAGACTTCGTTTAATTACATACTGATCAAGGAGCTGCCAT
TTCCAACTTTCTAACGAGAAAAGCTCGACTACATATTTAATCAAGAAATT
CAAGGaattattttgatcatttttgatTATTAATTACTGTGGCATGAATT
ATAAGTGTAATTGATATATTAGTGCATTTTGATGTTGATTGCTTACTTAC
GTATCTGAAATAGACAAGTTCACTGGAATAAAATTCCGTAAAGAATATAG
TTGACGCCGATCTCTTATCCGACTTTATACTATTCGATGCGCTCCATTGT
CcagtaaaattgaaaatcaacatCAGCAAGAACTTCTCATGAACGATGGT
CTACTATTTGATCAAACTCCCATTTCCCTTGAAAATAGAATAGGGGACAT
CAACACTAAAGTGCTGTAGAAACAGCTAATACCAAACAATCTCTTCGTGA
CTGCTGCAACAGGTCTATTCATTTGGCATAGCACATTTAATCTACAGGAC
TTGAATGTATAAATTTCAGAATGTGTTGAGAATAGCGAAGATGAAGAGAT
CAAGCTAGATTAATTAGACTTTAATCCGACGAGTATAAAAGATTTGAAGT
CCCCCTCGAAAGTAAAGTCATTCANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCAAAACAAACCCCGATTGTTTCTTATCGGAAATTTCACGCTGATT
CCGATTTTTTAATCGGTTTTACCGTACCTCTGACGGTTGGGGCGTAATCT
GATCAAATATAAAGGTCACCttaaaaacgtatatatacgtccTTAGGAAC
GTATCAAAGACGTATATGTACGTCCTTAGGAGCGAAAAGGTTAaattgtt
cttgatattttggccattgaagcttTATGGTTTTTAATAGTTTGATCTTA
TAAGAAAACGCATATATGAATTTTATGGACGTCCGATAGACGTTATTTTA
ACGTTCTGTGTGCCGGTTGGGATAAAAAACTTCTCCTTACAATAATCCTA
ATGGGTCATATTTGTTCGTACAGAAAGTTTTGGTATGGACCTTCATGTAC
TGACTGACTTACAGAGGATAATCCTTTTTATGATTCGATGCCAAAATGTT
TACATCATTTTTCTCTTGTGATGTTGACCTCGTCATGTTTTTGTTAACCT
GCTAATCCAACCCCCTTTCATTTGGCAATAAGAAAATTCTTCTTGAGATA
TCTACTACTtacccagttggcacacaaagttgtttcaacgtttaaatAAC
GTCCACAACGTCGATATAACGtcaaatgaacgttgaaacaacgttgtgtg
tcagctgggtataCAACCCTTAATAAACTGATACTAGCTTTGCCGTCTAT
ATTACCAATAGTACCTTACTATATTACTATAGTACCAATCAATATGTTGC
TTATCGGTGTTCCTAGTCTAAATCGCATACCACTGTAGATATACTATGAA
AAACTAGTTTCGATGGAGGATGAGTAGAAGCCTATGGCGTTCCAACCAAT
GAATATTGAAATATTCACCATTCTCATTTTTTCTTACAAATAATTATGTT
GGAATGAGGATAAATTGTATATTTTGTGTATGTATATTCGTTAATTGATT
TGTTATTTTTGCGGTCAGCTTTTTAAATGAACCAcgtcatttttaaacaa
aaagtcACAAGATAGTCGtttaaaaagttgaagaaaaatgCTAAGCAAGT
GAAATATCAATATCTCAAGTACATGCACCTTGTCAATTTTCGAAGCAACT
CTATGGCGTCATTTTTGTAATGGCCTTTCAATTTGTTTCGTTCGCCGCGC
TCTTACATAACTGTTTGTGCTGACTTCAGAAGGAAAGAGTATAAAATGCA
AGACTATGGTGGAAGTCGATCAGTTTCATAAAGTAGTCTAAAGAAATCAT
TCATTGAAGAAACAGTTTTAATTATATTAGGTCGTTGAAATTCTTTAAAC
ATGGATGCTAAGCAAAGTAAGTATTTGATTTTAGCCGATTTGAAAAAAAG
GAACCcgtttctttctgtttttttcAGGGTATGGTATATTGGTCTCATTT
AGTATCTGTCCATTATCCGACGCACGAAACTATAGAATTCTTTAGGATTT
GGTCAACGATAGCTAGATTCAAACCATTCGTTCgttcaaaagaaaaaggc
tGCTGTTTAGGGATGTTTGAAATATGATGAAATCTTTCGCTGTTGGAGCT
CTCATAGATGGCTGTAAAGtttgtaaaaatgtaaaaagaacATTCTAGAA
AACTCCAAGCTTGCTGTTTCTACTTTGTATAGATTATTGATGACGTTTTT
GAACAGATATTCAAGATCGTGCTATTTTGCGGGGTCAAAGTAATTAGGAT
TTTTTTGCGGTACAAATTTTCCTGTTTCAGCAATAAACCTACGCCTTAAA
TTCACAGAGACCTTTTTTATGTTACGCTTAAAAAGTATTGACTCATATGT
ATTCAATATTAGCTtgtttttcaattaaaatttcttttgatttctgTCTT
GACTACCAAAACTAAAGTTTTGTCCAAAACCCGTTTATCTTGGTTGGACA
TATTCTGTGTTGGTTGATATCCCGGAATAAAAGATTTGTTTTGATGGAAA
GTTTCAAAGAATGCGGAAATTTTCATATTGAAgtcaattttcttttccca
ATCTAATTTCTACTGACTAATGTTTTTTTGATATAcgtaatattttgaat
attactTTCGACTGTACTAATTCACTCCAAACTTTTATATGCATATCACA
ACTCATTGACGTGCagaattttttctttcctttctacAATGCGTAGTATC
CAGTAACATACTTCGAGCCTTTACGACTTAACAATAACCTTAGTATCGAC
CAATAGTATAAGTCCGGTGCTGGTTATTAATTCAATTTTGCACAGTATGG
AACCCGTTACTTTTGAAAATCTCTGAATGACGCATTAGCCTGTACGTGCC
TCTGGAAGAAAAAAGCTCAAAAGCTATTTTcctatttcaaatttcaaaat
gacgTGTTATATGTAGGTGTATAAATCCTATAAAACCTCTAGAAAATCCT
TAAGAAGGCCATAAAGTACCAAATATTTGATTAAGACATACAAGTGATTT
TGAAAGGATTTTTGTTCAGGTAGGTTTATATTAGGATTACTAAGGACTTA
AAATTGTGACAAGTAAAAGGGGTTTTTAAATATTGCTGGGAAAATTCGAG
ATTTGAGTGGTATTGAGAGAAATAATGGAACGATATGATTGTTGGATAAT
TCCACGACTTGTATATCATTTTCGTTTGATCCTCTATATATCATtatcaa
gaaaaattgaagtGAAAGTACCTAGCCACGATAGAATTATTAGagttttt
gaatatattttgcaTTGCATGGTGAAGAAAAATGCAAATGTGTTTTGATC
CGGAGATTATGAAATGACATAGGGAGCACCTTGcgtttttgaatttgatt
ttctttttggatCTAATCAATATTCTTCTTTGTTAAcatattgacaattt
ttttttattgtagcAATGGCCGACTTCAAGAACGACATTCTTAAAACACA
CAACACATACCGTAAAACACATCGATCCAACCCTCTCAAATGGTCCAATA
AGCTTCAAGCCAACGCCCAAAGATGGGCGGATAAACTAGCAAAGAAGGGA
TATCTCCAGCATGAAAACCAGTCAGATGAGGGAGAAAATATCGCTTGTAT
GAAGGGAGCAGAGCTGACTGGTGAACGAGCTGCAACCATGTGGTACGATG
AAGTCAAATATTATGATTACAGTAAACCAACATTCAGCTCCAAGACAGGA
CATTTTACACAGGTATGCAGATTTTCATTTCTCTAATTACAAGCACGACG
TACCGGGTACGGCAGTCCGTCGGCCaccgtaccagattttcacgaaaaat
cCTAAAATTATCCTCTTCTGTCGGAAAAATCGCTTAAACTCCTCATTCTC
CGTACCAGATTTAAAAAGCTTCCGTTGTGCCTGCTAATTATAATattcat
gaaaatattttcataagcCATAAGAAAAGAGGACCAAATGTCGCTTCCAG
ATATATTTTTACCCAAAATTATAATTTTGGCTTGTACTGTTTGTGTCACT
TTTAAACCTTTTGGGGAGAAAGTTGACAGAGTCCAAGTTTCTCTGAGTAC
GACATTGCTGTTAAAAATATACCTATCCTAGTTCCTGAGATTTCTGACAG
ATCTTAAGCAGTGGAAATATTGTAATATTCTTTTTCTGCTCTATCTAGCT
TGTATGGAACGGATCAACTGAGCTTGGTGTAGGCCGCGCGACCGCTTCAA
ACGGTATGCAATTTGTCGTCGCTCGATATAATCCACCCGGAAACATCCTT
GGAAAATTCCCAGACAACGTCTTTTCATCAAACGGTAAACCGCCACCAAC
GACGTCAAgcaacaatagcaacaataacCGGACGACAAGAAACAAGCCTG
AAAAACGGCAACAACAACCATCCAGTGATAAACAAAGTACGTATCTTGAT
GAAATATCTAAGGGGCtcataaaaatgaaagtcaAACCTACGGGTGGACT
AGCTCCACAGAAGCCAACCAGTTCCACACCTAGAAATGGATTAGTGTTGC
AACCACGGCAACCTGTTTCCGTTTCACTACCGACGACTGGTTTGGTAGTT
CACCAACAAAAAGCTACTACTTCCACTCCCGTACCAAAGGGTGGATTAAT
AGTTCATCAGTATACAACGACGACCGCTACTTCAGGCCCTAAAAGCAGCC
TAATGGCTCATCAGCGCCACGAAGCTGGTCCTATTTCTGTCACCATTAAG
ACAGAACGTAGAGAGGAGATAAGCTTCTTTCGAAGAATTTCACACGGGGG
ATAGAATGCTTTTACATTGTTTTTAATAGTTAGTTATTATATCCAATGCG
TTTCAAAGCGaaggctagaagcgaatcttcaatctttcccAATCAAGAAA
AAGCGGAGCCAATCTAgtactttattttgttttcgtttttaacatttttc
aaaatttgcaatAGTAATGCTTTCAAGCAAGTAGTTTTAGATTATATTAA
CCTATCCTACCTGTATATATGTTAACTTGACCATGGGATGTGACCaaact
ttctatgtttttttAATCTGGACGATCTTTATGTGAAAATTTGTTAACGC
TCTAACAGAGTTACTTGGACTTGGACATTActtattttataatttattaa
caaaatctttcaTTGTCTTGTCTTATATAAATACCCGTGAAAACTTTTTA
ACCGTTGTTTTCGCCCCTTGTTTGTACTATAGTTTGTAATATTTTTATGT
TGTACATATAACAAtgtatatttgaattttttttgagatatTTATCTTAC
GAAACATTTACGcttctgcaatattttttttacttgagaATTTTAAAACT
GACTGTTAAAACTATACTGCTGACAACCAGTACCTCATAGAACTGTAACt
gaaaaaacataaaacaaaaaccATCTTTGAAATAAGACAGTTTCTGACCA
CACCCGTTTGATTTGACAACACAATACCATACAACATGCTATTCCGATCT
TAGAGTATGTACAACATGCCTAGTTTCAGCCTCGAAAATTACTTGAATGA
ATAAACCATAATTTTGGCAAAACTGTTTCAGCTCTcattatttttaagaa
aatgttcTATTGAAAACTAAATTTGAACCAATAAATTAGAACGAAAATTG
GGAAGTTTAAACACATTAGATATTATGGAATAATTCGttacaattttttg
aaattttaatacaaaggaatttaaaaaaagaaaattacacAAAACTTTTT
AACAGTTCAgcttgtatgcttataaattcTCCTTCCCCAAATCTCAGCTA
TAATCTCACTGATTATAattgttatgcttataaatgtgTTTTTGGTTCTC
CAGTCTTCAAAGAACACAGTTTTTCATACCtactttttatttaatttgaa
caaattcTGAATCGCCCCTAAATACAGAGACACGTTCTTCGACGTTTTAA
CATTTTAACAGAGGTTTTATTTAACAAAGTTCATGGTCTAATGAGGTTAC
TTTATTGACAGCAGACTTTGACTTTAACGATATTTAGATCAAGAATTACT
TAACGTGAATAACTTTGTttaaaatactaattttttttcagcttATCCGA
GATTTCTAAATATATGTATTAGATTTTCAAGGGATTTTCAACTCACTGAC
ATTCCCAGAAGGAATGCTTAAGAACTGTGACTTTTACTAATTTCGAGTCT
CCAAAGACGCAATAACTTAATCAaaacgattttttataagaacagactat
ataagaacataaggcttcgatggccaaaatgttaagtacaagttaagaac
atttttaggctttaagaaaaaacttcaaaaattttggatgttcttattaa
aaaaaccgTGTATTTCAATAAAACGTTTACTCTATCTATTTTAGCTGACA
AAGATTTCAAGAATGCTGTCTTACGTACGCATAACCAATTACGTAAGCAT
CACGGCTCAGGCCCACTACGTTGGAACAGTTCTCTGGCTAGCCAAGCGTT
AAGTGCGGCACAAGAGGCGGCTGAAACCAACACTCTACGCTCAGTGGATA
ACAACAAAGTGGGTCAAAATATGGCAGCGATTTCCGGAGCTGAATTAACG
GGTGAAAAAGTTTCCAACATGTGGTATGATgaggaaaagaaatataattA
TAGAGAAGCCAAATTCAGTTCAAGTACAGGTAAtgagcttttttataaga
atcagtaaaCTTTGACTGGCCctcctttgttcttatttttctttatcttt
atctTGAAGTACAGTGGAGTGTCTTTAACATAAACACGCACAAGGAACAC
TTTTTCGAGtaatggaaatttcaaattatggAGTAAGGCTAAGGCATtag
ctgaagggaccataaaaattgttcgagataaggagacattcgagttaagg
agacattcgagttatggaggtttGAATTAAAGAGACTTAACTTAATTCTT
GAATACAGTGGAACCTGTCTAAAGCGGAAATTGTATAAAGCGGATATTTT
TTTAGGACGGGTACTTTCACACTCTCCTTGAGACGGTATATTTTAAGGTC
AATCTCTCGTGAAAGGTTTTGACATGGCTGGAAAGATTCTACATACTTTT
AAGGTTAAAGATATTTACCAAAACTGTAttgaaatatttcttcttttgtA
TTTCCAGGAAGTTTCACACAACTTGTTTGGAAAGGGACAACCGATCTTGG
TGTGGGTAGAGCTTTCGGACCTAACGGACAAACGTATGTTGTAGCTTTAT
ACCAACCAGCGGGAAATGTTAGAGGACTTTACAGTGAAAACGTTTTACAA
TCACGTGGTACGAGGCCTGGGTCCAAGAAAGAGGATCAAGGGTGTGGCTG
TGCCATCATGTAACACCTTCCAAATCAAAGATAATCTGATGTTTTGCTGA
CTaataggaaaaattattttcaaaatggggACAGCTAAAAGTATGGCGAT
TCCTTCAAATGACAATCGCCTTAAGTAGGCGTTCACTTTAAATGGCGGAT
AGCTGCCaaaagtttacttgaaatagaCGGCCATGATAGATATCGTTAAG
AAAATATGATATTCTTTGAATTTGGGTAGAACAAAGTTCATTTTTGATGA
ATATTCTGAAGACTGTCAAATAACTCGACTCTCAAGGTTGATTTAACCGG
CAGGGAAACGTTTTTCTAGCGTTACTTTGGCTAAGGGACTAAACTTGCTT
GATTTATCCTTTTTTTTATCCACCATTATTGCTATGAACTGTATATGTAT
ATCCAAATGTCAGAAAATTTTACAAACGATCTAAAATTTTATGCTGGttc
ttaaaaatttagtttAGTTTTATGCATACAGTATAaccttttctttgaaa
attcattaatattaataaaattgaaaacattttttgatttatgatttgaT
TTATAAATTAACGGCTAATTTTATAGCTAATGTTCTTAAGTCTGataatt
tttgtagatattaTGATTTTTTCCGGAGAAAGTTAATTTTCACGGAAcct
ttttgtatattttatttataGTTGATGATTTTTTGGGATAATAAATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014401-exon-sc0000187-1491911889:433373..433536 | TCONS_00014401-exon-sc0000187-1491911889:433373..433536 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1510915933:433373..433536 | TCONS_00014401-exon-sc0000187-1510915933:433373..433536 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1575043694:433373..433536 | TCONS_00014401-exon-sc0000187-1575043694:433373..433536 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1491911889:441036..441334 | TCONS_00014401-exon-sc0000187-1491911889:441036..441334 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1510915933:441036..441334 | TCONS_00014401-exon-sc0000187-1510915933:441036..441334 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1575043694:441036..441334 | TCONS_00014401-exon-sc0000187-1575043694:441036..441334 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1491911889:441771..442008 | TCONS_00014401-exon-sc0000187-1491911889:441771..442008 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1510915933:441771..442008 | TCONS_00014401-exon-sc0000187-1510915933:441771..442008 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1575043694:441771..442008 | TCONS_00014401-exon-sc0000187-1575043694:441771..442008 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1491911889:443967..444251 | TCONS_00014401-exon-sc0000187-1491911889:443967..444251 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1510915933:443967..444251 | TCONS_00014401-exon-sc0000187-1510915933:443967..444251 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1575043694:443967..444251 | TCONS_00014401-exon-sc0000187-1575043694:443967..444251 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1491911889:444730..445621 | TCONS_00014401-exon-sc0000187-1491911889:444730..445621 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1510915933:444730..445621 | TCONS_00014401-exon-sc0000187-1510915933:444730..445621 | Clytia hemisphaerica | exon |
| TCONS_00014401-exon-sc0000187-1575043694:444730..445621 | TCONS_00014401-exon-sc0000187-1575043694:444730..445621 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:433373..445621 + |
Blast
BLAST of TCONS_00014401 vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 9.271e-32 Identity = 63/148 (42.57%), Postives = 91/148 (61.49%), Query Frame = 2
Query: 161 TAMADFKNDILKTHNTYRKTHRSNPLKWSNKLQANAQRWADKLAKKGYLQHENQSDEG---ENIACMKGAELTGERAATMWYDEVKYYDYSKPTFSSKTGHFTQLVWNGSTELGVGRATASNGMQFVVARYNPPGNIL--GKFPDNVF 589
+A F N++LK HN YR+ H PLK L AQ++++ LA L+H +S G EN+A + TG+ A WY E+K Y++ +P F+S TGHFT +VW + ++GVG+A+AS+G FVVARY P GN++ G F +NV
Sbjct: 4 SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLA-WASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVL 150 HSP 2 Score: 102.834 bits (255), Expect = 6.154e-25 Identity = 60/152 (39.47%), Postives = 89/152 (58.55%), Query Frame = 2
Query: 695 KQTDKDFKNAVLRTHNQLRKHHGSGPLRWNXXXXXXXXXXXXXXXXTNTLR---SVDNNKVGQNMAAISGAELTGEKVSNMWYDEEKKYNYREAKFSSSTGSFTQLVWKGTTDLGVGRAFGPNGQTYVVALYQPAGNV--RGLYSENVLQSR 1135
K K F N VL+ HN+ R+ HG PL+ +L +A ++ A T L+ + G+N+A S + TG++V++ WY E K YN+++ F+S TG FT +VWK T +GVG+A +G ++VVA Y PAGNV G + ENVL +
Sbjct: 3 KSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLPPK 153
The following BLAST results are available for this feature:
|
