TCONS_00014386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014386
Unique NameTCONS_00014386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2395

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014386 ID=TCONS_00014386|Name=TCONS_00014386|organism=Clytia hemisphaerica|type=transcript|length=2395bp
ATGAATTTGTGTGATGCTATGCGAAAATAACTGTAACAAAAGTATGACTT
TTTCTCTCATTTGTTGACAAAAATGAAATGATGTTGTCACAGAACCATAT
TTTAAAGAGACGAATGTTTAAAGATGGCGGATGAGCTGCCAGTTGATCAT
GAATTTGTTGATATTATTGTCTgttctaatttttgaaaaagCTACTGCAA
CCAATGAAACCGAGATCACGTGTCAAACATCATGCATACATGAATATGGT
GAAACGTGTCTGAATGACCAATCACGATGCCAATGTCGTGATGGCTTCTT
CAAAGGTCGAAAAGTATGTGAAGACTTGAACGAATGTGCTTCGCCATCAA
CTAACGATTGTCATGGCAACGCCAAATGTATCAATCTATTTGGAACATAT
CAATGCACATGTAAAAATGGTTTTCAGGGGAATGGAACCCACTGTGAAGA
TATCAACGAGTGTATTTCCGCCACTAATGAAACCAGATGTCACGAGCATG
CGCAATGCGTCAACACTAATGGATCATACACGTGTCAATGCTTAGATGGT
TACCATGGCAATGGGACTTATTGTGAACTTTTGGTTTGTAAAGAAGATAC
ATGCAATCCATTTCACGGTGAAAAATGCATCATTGAAGACAATCATCTCA
AGTGTACATGCGCAAAGGGATACTTCAAAGGACGGAAAGTTTGTGAAGAT
ATTAATGAATGCAGAAATGCTGAACTTCACGATTGTCATACTAACGCCAA
ATGCAACAACACCATTGGTGCATATCAATGCACGTGTTTAGATGGTTACC
ATGGAAATGGTACGCATTGTATCAATACGAACACGTGTGAATACCAAAGA
TCAAAATGCTCCACGAACGCTACATGTGTAGATCTTTCTGACTCTTCTTC
TTACGAATGTCATTGCAATCAAGGCTTCACTGGAGATGGCTCACATTGTA
AAGATGAGAATGAATGTGAAAGCAAAGATAACTTGTGTCATTTGAATGCC
ACGTGCTACAATACGATTGGTTCGTATCATTGTGTTTGCAACAATGGCTT
CCAAGGTGATGGGATCAGTTGTCAAGATAAAAACGAATGCCTTACACCTT
TCCTGAACGAATGTCCACAAGATTCATCTTGTGGGAACACAATTGGAAGC
TTTCAATGTCCCTGCAACGCTGGATTCGAACAAAATAATGGCTTATGTAT
TGATCTTAACGAATGTCAGACACAGAAACACAAATGCGATCAGAATGCAC
TTTGTCAAAATACCCACGGTTCATATCGTTGCCAATGCTTTGATGGTTTC
TATGGTGATGGAAAGACTTGCCATGatgtTGATGAATGCCatcaaaatat
ttcagattGTCATTCACAAGCTCATTGCACAAATACTATTGGTTCTTATA
CTTGCGCATGTGCAGAAAACTTTATCGGAAATGGAACTTTTTGTAGAGcc
aAAACATGCTTGGATAGAAGCTGCCCTAAATACTCATATTGCTCCGATCT
AACTGGTTGTCATTGTAACTTGGGTTTCCTATTGAACAAAACCACATCTT
TGTGTGATCAGGTGAAAACTGGGTCAGGTATCTTGGTTCAGAATCTGCAC
CTCAAAGAAGACTTCAAAGAGGAATATTTGGATAAATCATCACAAGAATA
TATACAATTCATTGCTCGTTTGGAATCAACATTACTTAAGTTCATGACAG
TTGTCTACCCTTGGGTTGCACCATTATCTGTTAACGTAAAAGACCTACGA
CGTGGGAGTGTGGTTGTTGATTACGTGGTTACGTATGCGACGGATGACGA
ACTGAGTCTTGACGTAATGAAACGGGAGATCGAGTATGGCTTGTTACGTA
ACCAGTTAGAAGTATTTGAAACGACAAGAAAAACTGTACAAGTTTCAAGC
ACTAATGGCTGCAATCTTGGCTTTCCAAAATGTAATAGCATTACAGAGTC
TTGTCAACCATTGGCAGGATTTGATTATGATTGTGTTTGTAAAATGAACT
TCACACGTTCATCTCACAATGGAAAATGTTCAAAGATTACTGGATCTCCT
ATTTTTTCCGATCATCAGATTAGTAACGGCAATTTTACTGTTATTGGTGC
TGCATGCGCCTGTATCTTCGTCGTGCTTCTCTCCTTCCTAACAGCGTTCT
TATTGGCTCAAAGAAAGCATCGAGCAGCTAAAAAACAAGCTAATCCACCG
GCACCGGGACCCTCGATTGATGCAAACTGGAGACTATCACAAGATGGTAG
ACAAGCTACGAGGGAAAGTCACCTTAACTCCGCTTATCAatattgattat
ttttgaaagatattttttatatGGTAGCTTAATCGAAGTAAAAAGCATTA
GAAAATAATAATACACTATCTTTGATTTTGCTTACAAACTTGGAC
Run BLAST on NCBI

transcript from alignment at sc0000187:306186..320096+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014386 ID=TCONS_00014386|Name=TCONS_00014386|organism=Clytia hemisphaerica|type=transcript|length=13911bp|location=Sequence derived from alignment at sc0000187:306186..320096+ (Clytia hemisphaerica)
ATGAATTTGTGTGATGCTATGCGAAAATAACTGTAACAAAAGTATGACTT TTTCTCTCATTTGTTGACAAAAATGAAATGATGTTGTCACAGAACCATAT TTTAAAGAGACGAATGTTTAAAGATGGCGGATGAGCTGCCAGTTGATCAT GAATTTGTTGATATTATTGTCTgttctaatttttgaaaaaggtatgtact tttctttctttcacaTTTAAACTAAACCTTCTTTAacagaaaaatgtttt aattttcaccatattgtgagtatttttgtccattttcctaagaaaaaggg tccataaagccttaaaatgttcttaactagcTCTTAATATTTCGGCCATA GAAGTATTATCTTCTcataatacaatttttttataaaaacaaactatata agaacataaggcttcgctgcccaaaatgttaagaacattttaaggcttta tggactcaaaaacaccctatttcttgggaaaatggtaaaaaacattcaca aaatggtcaaagtaagaacatgttacgaatgtttttaggcttaaaactca aaaagttaaaggcttcaaaaattttggatgttcttataacaaaaatgtGT ATACTTTTTAGCTATCCTTACATTAGCTACTGCAACCAATGAAACCGAGA TCACGTGTCAAACATCATGCATACATGAATATGGTGAAACGTGTCTGAAT GACCAATCACGATGCCAATGTCGTGATGGCTTCTTCAAAGGTCGAAAAGT ATGTGAAGGTGTGTATTTAAATGCTTAAGGATCAGGTCCGGTTATCGTGG TCGCTGGTTGGATTCTTTAACAGTTCTGTTCACTGTTAAAGAATCCAACC AGCGACCACGATAACCGGACCTGATCCGATTTTAATGACGATATGGCGTA TCAGCTCACTGAAATGCTTACTgataacccagctggcacacaacgttgtt tcaacgctcatataacgttatatggacgttacgAACATTAGATAAatgtt gaaacgacgttgtgtgccggctagGAAGGCCAAATGCAACGTGAAtaaaa gcctgggatacacaggGACTAGTTTGCCGTTCTAAATCTAAGAAGTCACC TCAAAATGCAGCGTCCCTaattattttcagaaaattgagcCTCCACAAAA TCGAAGTCACTACATGTTTGTTAGGTTTGTAGATTTAATATGTCATGTTT TATGACGATATATATGTAACGAAATGTTTTGACGCCATTGGATTCTTCGA AGATCGAGCCCCGAGTCGAGCCCAATCCCCTAGGGGTGTTGGGGTAGAAT TATGTGTATTGATATGTGGTTTTCCGAAAGATTGGATCTGAAAAGGGCTT CATTTAGActatatttcaactttttgttcTGGAAAAACCCTGGTGTAGTA AGCAATATATTCTCATTTTTTCACATCACCAACAGACTTGAACGAATGTG CTTCGCCATCAACTAACGATTGTCATGGCAACGCCAAATGTATCAATCTA TTTGGAACATATCAATGCACATGTAAAAATGGTTTTCAGGGGAATGGAAC CCACTGTGAAGGTATTTCGTTCATCCACCTGATTTTGTGGGGCAAGCTTC TTCCCATAATCATTATTAAGATTATACCTTGACTTGGAATGTGGACTTTT GAGCCTcaatcaaattgttcttatcctgttcttatttatagggggAAATT GAAGTATTTTAGGCTTTATATCCAACTTTAATACTTTGACCCctgaattg cttgaaattgagtaattacaggctcagcattgttcttaaattgttctcat cttttagcgattttgagctTCATTGAAAACCAAGCCTTCAGATGCTTTTT AACTTCCTTAGTTTAAGGCtaaaactgttcttattttcaccattttgttt gTAAAACTGAGAACTTAGTGGCGTTGGTACCGGAATTCTTCAGTTTAACT TTTACCGAGACTTTTGATGAGGTGAGCAAAGAATTTGCGCAAGataatga aattgtttttcctTCAATTTAGATATCAACGAGTGTATTTCCGCCACTAA TGAAACCAGATGTCACGAGCATGCGCAATGCGTCAACACTAATGGATCAT ACACGTGTCAATGCTTAGATGGTTACCATGGCAATGGGACTTATTGTGAA CGTTAGACAAATTTCATTATTCTTTGTTTCTTCGAAAAGCTGATCTTGAA CTTTATCATCACTTTTAACGTGTTTTCTAATAGATTTACATTTCGAGTGT TATACTTTAGGACGGTCGTTTTTCGTACCCATATCAGGGAAATAAGTCGA AACGGAGGAAAAAGTCGCGAGTTTAGCTTGAAAATAACTATGATAAGCGA ACGTAGTGAGTGTAAGGCAAGTGCTAGCTACATTATCCTAGGCGACTATT TTGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNaaacaaacaaacaaacaaacaagtaTTTTT CGATTACTAGTTTTGGTTTGTAAAGAAGATACATGCAATCCATTTCACGG TGAAAAATGCATCATTGAAGACAATCATCTCAAGTGTACATGCGCAAAGG GATACTTCAAAGGACGGAAAGTTTGTGAAGGTTtgacttgattttcttta aaaacattcCAGAACTAGTAAGGTTTGGCTGACACTCGGCTGATTCTTAG GATTAAAAAACGTTCTTGATATTGGTTATTTCAGGCTCTTAATTTGTCCT TAAGTTTTAGTCAAAATTGAGCCTcttatttcaaaaacttttgtcgtgaa agAGCCTGTTAAAGTATATTACACTTTACACATCGAAAATTGATTATAAT AAGTAGCTAAATGATAAGTAGTCCTACAAAAATATTGAGTTTTTAAATCC ACAGATTTCAACGAATGTGCATCACCATTAAATAATGATTGTCATGACAA CNGCGTTGTTACCGGAAATCTTCATTATAACTTTTACCAAGACTTTTGAT GAGATGAGCAAAGAAAGAATTTGCGCAAGataatgaaattgtttttcctT CAATTTAGATATCAACGAGTGTATTTCCGCCACTAATGAAACCAGATGTC ACGAGCATGCGCAATGCGTCAACACTAATGGATCATACACGTGTCAATGC TTAGATGGTTACCATGGCAATGGGACTTATTGTGAACGTTAGACAAATTT CATTATTCTTTGTTTCTTCGAAAAGCTGATCTTGAACTTTATCATCACTT TTAACGTGTTTTCTAATAGATTTACATTTCGCGTGTTATACTTTAGGACG GTCGTTTTTCGTACCCATATCAGGAAAATAAGTCGAAACGGAGGAAAAAG TCGCGAGTTTAGCTTGAAAATAACTATGATAAGCGAACGTAGTGAGTGTA AGGCAAGTGCTAGCTACATTATCCTAGGTGactattttgataatttttat acGAGTACCATTCTATTGCAAAACCACTTCCAGTTTCCtttaatgaaaaa acaaacaaacaaacaaacaagtaTTTTTCGATTACTAGTTTTGGTTTGTA AAGAAGATACATGCAATCCATTTCACGGTGAAAAATGCATCATTGAAGAC AATCATCTCAAGTGTACATGCGCAAAGGGATACTTCAAAGGACGGAAAGT TTGTGAAGGTTtgacttgattttctttaaaaacattcCAGAACTAGTAAG GTTTGGCTGACACTCGGCTGATTCTTAGGATTAAACGTTCTTGATATTGG TCATTTCAGGCTCGGACCGTTCTTAATTTGTCCTTAAGTTTTAGTCAAAA TTGAGCctcttatttcaaaatctttctcgTGAAAGAGCCTGTTAAAGTAT ATTACACTTTACACATCGAAAATTGATTATAATAAGTAGCTAAATGATAA GTAGTCCTACAAAAAATATTGAGTTTTTAAATCCACAGATTTCAACGAAT GTGCATCACCATTAAATAACGATTGTCATGACAATGCAAAATGCATTAAT CTATTTGGTTCATATCGATGCACATGTGAAAATGGTTTTCAGGGGAATGG AACCCACTGTGAAGGTAACTTTTTTTTACAATGTGGAAACCATGTAAAAC ATATTTAAACTAAAATTCCCTTGTGCTTTCTGAAGGGAGCATTGAAATAA AAGCTTATTTTATCTTACTTTGACCAGATATTAATGAATGCAGAAATGCT GAACTTCACGATTGTCATACTAACGCCAAATGCAACAACACCATTGGTGC ATATCAATGCACGTGTTTAGATGGTTACCATGGAAATGGTACGCATTGTA TCAGTAAGTAAAATTCAAAATCGATNAACGGAGGAAAAAGTCGCGAGTTT AGCTTGAAAATAACTATGATAAGCGAACGTAGTGAGTGTAAGGCAAGTGC TAGCTACATTATCCTAGGCGACTATTTTGATAGTTTTTATACGAGTACCA TTCTACTGCAAAACCACTTCCAGTTTCCTTTAAtgataaaacaaacaaac aaacaaacaaacaagtaTTTTTCGATTACTAGTTTTGGTTTGTAAAGAAG ATACATGCAATCCATTTCACGGTGAAAAATGCATCATTGAAGACAATCAT CTCAAGTGTACATGCGCAAAGGGATACTTCAAAGGACGGAAAGTTTGTGA AGGTTtgacttgattttctttaaaaacattcCAGAACTAGTAAGGTTTGG CTGACACTCGGCTGATTCTTAGGATTAAACGTTCTTGATATTGGTCATTT CAGGCTCGGACCGTTCTTAATTTGTCCTTAAGTTTTAGTCAAAATTGAGC CTCTTATTTCAAAATCTTTCTCGTGAAAGAGCCTGTTAAAGTATATTACA CTTTACACATCGAAAATTGATTATAATAAGTAGCTAAATGATAAGTAGTC CTACAAAAAATATTGAGTTTTTAAATCCACAGATTTCAACGAATGTGCAT CACCATTAAATAACGATTGTCATGACAATGCAAAATGCATTAATCTATTT GGTTCATATCGATGCACATGTGAAAATGGTTTTCAGGGGAATGGAACCCA CTGTGAAGGTAACTTTTTTTTACAATGTGGAAACCATGTAAAACATATTT AAACTAAAATTCCCTTGTGCTTTCTGAAGGGAGCATTGAAATAAAAGCTT ATTTTATCTTACTTTGACCAGATATTAATGAATGCAGAAATGCTGAACTT CAAGATTGTCATACTAACGCCAAATGCAACAATACCATTGGTGCATATCA ATGCACGTGTTTAGATGGTTACCATGGAAATGGCACGTATTGTATCAGTA AGTAAAATTCAAAATCGATattttggaactaattttgcgagttttttatc aaaaaaaattcaaatatcaaaagaaGTTTCTCgccaaattgattttttta caaTTGTTGCTGGTTGCCAGAATTAGTTCCCTTAGTTTCCCTTATTGCCC GTTGACTTATTTTGATGAAGTTCCATTCATCATCACTTTCATATTACTCA AGTTTTTTCAAACGTCGGCAGTTTGAACATTACGATGTATTCTTCTTTGA CAATGCAAGGTACAGTTGCCTCTCCccaattcgatcttcaagggaccaag agttttcttcgaattagagatgAATTCGGATTATAGAGTGTTTTACGTTA CTTTCCAGCTAAGTGAActaatgttttagttcgaatcatagaggttcgag taagagagagttgactgtagcGATTGAAAAGTAATGCCGGAGAAATAATT CTGCGCAAAAATATAACTTTAGCCTTTGGTAagttattttttagattttg aaaaaggaaGCTCGTATACTAAgatataaaaatctaaaatttcattcttc tttCGCCCGAAAATTTCCCAAATACTTTTAAATTTGTAACAACTAACTTT TTCCATCTGTTTTTTAAGATACGAACACGTGTGAATACCAAAGATCAAAA TGCTCCACGAACGCTACATGTGTAGATCTTTCTGACTCTTCTTCTTACGA ATGTCATTGCAATCAAGGCTTCACTGGAGATGGCTCACATTGTAAAGGTT TGTTTCAGATATCCATCGTATCGTTGTGTTTCAACATTATTATGATGCCA ATTTAACTTTAGGTTGGACAATATATatatacatgcttttttttatcgtt aaagaaaaatgtgttatgttttattttgatttggttgcACATCACAAggc tttttatgtttcacttacattctttttttatatacatatcctggatattc tcaacttttttgggaaaatcatctaaatattcttacggtactTTTAGGTT AAATTCAACccaaattaaaaatgtaaaacacacctgaaacaaaaaatggt atttttttgaaagtattgaGCCTTACTAGGCAAAATGTCAATCAATAATC AATCCACATGcagtgatattcttagcatgttcttaaatttttggccaatc atatcatgaatattcttatagagttcattcttataaaaatgtgttTAAAC GTAATTTTGACGTTTTGGCAGCTAGCTTCTTTAGGAAAATGATAACTAGC TTTAATAGCCATTAGTCTGTAATATTTATTGCTTTTTTCTACAGTGTTTT TTATCGGTGGCAAATTATGATTGATAAGCTTTGAAGTCTGATGGAATTTA GTTTACGAGATTGACTACaggtttttcttcttcttttcttcaccTTCACA CAGATGAGAATGAATGTGAAAGCAAAGATAACTTGTGTCATTTGAATGCC ACGTGCTACAATACGATTGGTTCGTATCATTGTGTTTGCAACAATGGCTT CCAAGGTGATGGGATCAGTTGTCAAGGTTAGTCTATATATTGACACCCCT TTCCATTGTGGAACTCATCAAATAggggaaatgaaaatttctatcaaaat tcaaatggggatagaaattttgttgttctcaggttaaaaaatccagtgag gatggtTTTGAGGTGCAATTTGTTCTATCGAATTCATCGAAGTCAATTTC ATTGGGGCAGATATAATTAGAGGgtgattggaggtttttttTAGACTTTT GAATTATCAGTTCTCAgcctaaaaagagaaaaaaattgtcaaaaatgttC CTTGGGGGTGCCTAAATcccaactttcaaaaattgCCTCCCCATCTTGCA TTGTTTGTCAACCAGCCACGCTACTGTTACAGGAGGCTAGAAGCTACTGT TTTAATGCTACTAAACATTGAGCACGTCGCTCCCCTCGTCTACTACGAAC TAGTGTAATAGCAACGAACCGATAGCAcagttgggagagcaatcgcccgg caagcgagaggtcgtgggCTCAAttcccactcgattcgttacctttgaga aaactgggaagtacattagtgcaggatccgttgattcattacctaTAATG CTactaaaatttctttattttatacCGTAGATAAAAACGAATGCCTTACA CCTTTCCTGAACGAATGTCCACAAGATTCATCTTGTGGGAACACAATTGG AAGCTTTCAATGTCCCTGCAACGCTGGATTCGAACAAAATAATGGCTTAT GTATTGGTAAATTGCAATAAAATCCttcattaattaatttttttttcttc ataaaaaccATAATGAAGTGTTTCTGAGGTTCAGTCGTTGGTTGTTCTTA CAATAAACGCATGTTTGAAAAGGGACTGAAAATTACAATTTTGGCATTTT CTGTAGTCgagggacgagtttttcgccaaaacgagaaattttgcacactt gatccttgggcaaatccctggggtgattttttcatttttttaaaattttg atttttggggcctggggacgagtttttcgccaaaacgaggctaaaaccca aaatgctataatttttctaaagccattaagtttacaattgggcctacgaa tgatttcaaagatactgaagttgagccagtgcggttagcacgttcgacag ttcagaaatagtagaaataaagccaaaaagtaatggagggaacaatttta gtttatacaaactaaatctcgtaacaataatcgtattactATATAACACC TacactactgtattacacgcattacaaacgactccagtctacattTTCTG ATGAATCGAATATTTTTGGTTTGTCATTACATTTGGATCATTATCGAACC TCGTATTCATGTAAGATTGTCCAAAAACCTGTAAAATGATGCGGACCTTG ACAGGGTGTCaggaaaacgtctcggtaatgacctaaatggtcgttcaaat cttttataaatctattcaaagcggctttccTTTGATGTACCACCATTTGG atacaaaaaacatcaatttataactttataagaacatagaGAGCCttatc tgttcttataaagttataaattgatgttttttgcatCTAAATGGTGGTAC ATCAAAGGAAAGCCGCTTCAGAGAGAGCCTTATCCGTTGATttagaaaaa cttaatttttcaTCTATCGATGATTTTGGGGGTATTGTGAAGGAATAGAA TAAAAggcgttttctctccatctatttTTATTACCTTCGTGATCTATTTT ATTGGTGTCTACTTAAAAAGTCtattacttttttacttttttgttgttaG ATCTTAACGAATGTCAGACACAGAAACACAAATGCGATCAGAATGCACTT TGTCAAAATACCCACGGTTCATATCGTTGCCAATGCTTTGATGGTTTCTA TGGTGATGGAAAGACTTGCCATGGTAACGGGgttttgatagttttttcag gaccagttttaaaaatttatatgGGCTAAAAAAATTTAGGTGAAAAAACC CTTATAAGATTTTATTGAATTAGTATGAGCTATTAAGTTAAATACAGGTA TAGACAAGAAGAGAGATAATTAGGAAAAAAGGGTTCTGGGTGTGTGACAA CAgtaaaattcgttttttttcacCCTCCCAAGAATCTCGAAGggttacaa aaaaaaatcagaatagCCACTCTAAGATTAGgaagtttttcgaaaatttt ctctcTAAGAGTAAGTTTTTCGTAAGAATTCCCAAGTCTTTTCAAGGTTC TGCTTTTAGAGGTCAGGTTCACACATACCCGATATTCTTCAAACCTGTCC CCCCTACGGTTCCCAGCGAAATAGATCAACAAAatctcttttcatttttc agatgtTGATGAATGCCatcaaaatatttcagattGTCATTCACAAGCTC ATTGCACAAATACTATTGGTTCTTATACTTGCGCATGTGCAGAAAACTTT ATCGGAAATGGAACTTTTTGTAGAGGTAAAGGGTTACAAATtcaaataca gttgactctctctaattcgaactcgaataGGTgatctaatttgttcgaat tatagaaagtgtCTTACTCAGGTTTATTGAAGGGGAATGATAATTAATTC GAACtatagaaaaattcgaatgatagaagttcgaattagcgagagttgaC TGATATGGAGATTTAAAATGTTATCACAGAATGCCGTATTTATATCAAAC TTTGCACATCAACTCTTAATTCATAAAACACATAAACCTCACGAACTAAA ATCTCTCAATTTTGACACCATTTATTGATGTCCTattagaaatttttcaa caaaagattcttttgtttatggatggtattttgatatttttatttagttC CTCTTCACTTCACTTCACATCACtatcctttttttcaaaatagccaAAAC ATGCTTGGATAGAAGCTGCCCTAAATACTCATATTGCTCCGATCTAACTG GTTGTCATTGTAACTTGGGTTTCCTATTGAACAAAACCACATCTTTGTGT GATCAGGTGAAAACTGGGTCAGGTATCTTGGTTCAGAATCTGCACCTCAA AGAAGACTTCAAAGAGGAATATTTGGATAAATCATCACAAGAATATATAC AATTCATTGCTCGTTTGGAATCAACATTACTTAAGTTCATGACAGTTGTC TACCCTTGGGTTGCACCATTATCTGTTAACGTAAAAGACCTACGACGTGG GAGTGTGGTTGTTGATTACGTGGTTACGTATGCGACGGATGACGAACTGA GTCTTGACGTAATGAAACGGGAGATCGAGTATGGCTTGTTACGTAACCAG TTAGAAGTATTTGAAACGACAAGAAAAACTGTACAAGTTTCAAGTAAGTA AATATCACCACTGATGCCACCAGAACCAGAAACTGTGTTCTTATTATAGG TGAAACATTCATATAACTATTTTTATCAAGAAGGTTCTTATCTTCCCTTA GAGTGCTCAATTAATTTATTAAAGTAGTTCAGAATACACCCCCTTcgcac agacccactgggaccctttcccactggaaaaattggccaggTAGAAAATT CGTATCCTTTAATTTTTGTccctactgaaaataatcaaacaaaccaatcc tcactgcaaaataatttactatttttcccatccccactgaattttctgac aaaagaattgaaatccccagccataaaacatatggaaatatcaatctcca tcgagTTTTTTTCTGTTATTGTTAtctccactggctgaaaaaatcctacc gggtctgtgagaagggggtgtcagaATGTTTCTGTAGGCTAAATACTATC TGATTATCCCTCTAAAGGAACTCTTTTAATCATTTGCCAGTACTGGTTTT TTAATCATCCATTTTTAGGCACTAATGGCTGCAATCTTGGCTTTCCAAAA TGTAATAGCATTACAGAGTCTTGTCAACCATTGGCAGGATTTGATTATGA TTGTGTTTGTAAAATGAACTTCACACGTTCATCTCACAATGGAAAATGTT CAAAGATTACTGGATCTCCTATTTGTAAGTTCTTTGAAATTCGcgatttt atgaaattttcacgaGTTTTAAACTCTGGTAGCATTGTAATACACCAATC ACTTTACTTGAGGCTTGTTAAGCActgtaaacattttcaaaagttgaaat tCACCTCATTTTCAATAACCCAATATTTTCCAAATCTCGTTATTTATGTT GCATAAATCAAATGagaatgaaaaatctcaataagGACTTTGTAAACTCA GGCCCTTTAAGTGGAtttcttttcggaaaaaaagttgattctactaacca tttttgaaacatcattactctttcaaaaaaaattatttttaaaatttttt ttcgacttcATGACGGGGAAAGATAGAATTTTAATATGGTTACAATGATA CCCATCAAGCCGGTGAaaaatttacatagaatttcaTTAATGTGGAGAAA GTcgctaaaaaatacataaaatggcGCCTCCGCGGGATACAGCGTTGAGC TTTTCACCTCAACTTTTGTACACGAGTAGTTCAAGCAGGTGGCTATTCGA AACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNGAATTACCAAAACTTCAGTATTTTCAC TTGAGTTCGAATTTCAAGCCGTATTTTAACCATATTGCACAATGAAACCC TCCACTACAGAGGTACTTTCAATATGGAGACTCTCCATCCTCCCTACTGc cttggaaaaagaaaatcacgaATTTCCAATTTTGTATCGCGCGGAATGTA GGGAAAACATAGTTTCTCCaagaaaattctcaaaaaatggaAGGTACAGG CCAATGGGTAAACCTGTTTGTTAAAAATGGTTGATTGACAAGTAGATNTA AACCTGTTTGTTAAAAATGGTTGATTGACAAGTAGATTCTTACGCAATAA GCcagtaatcaaatttaaaaggaaGACGCACTTCTTTCGTTCTTTTGAGC ATAAACCAATTAGCTAAttctcttatttttttcttaaaaaaatgtttaca agaaTAAGACTGCGTTTATTAAATATTGATTGATGCGTGAGGCCTTTTCA TTAAACATACAACTCTGTCGGTGTCTTTTTAGACTGTACCAGAGAGATCT TAGAAAAGAGGGAAAAGAGAGTTTTCGTTTCAGAACCACTTAAAGGGCCT GAGAAGAGGATAAGAAGATTTTGAAGGCGGATTTTTAGAAGCCTACATTG ATGTAATttccgagcagattctgatactccgCACATGAcacgtattcact ctaaaggccaTGGCTCCATAAGAGaatctgcaacaaaatcaactgtcaat catatccataaaaaataataaacattGAAACTCAGTTGCTTTCGCTCTCG TTTCCAAGCAAAAGTAACGCGATAttgttttggctgaacaaccaggtTAG ATCGTCACATTCGCCATATTCCTTCAGAATAGAGCATTGCatgcgcagaa tggatgatctgttatgaagTTAATATTGATCTCACCGTAACTAGTGATAA ATTGGGTCCGAAAAATTTATGAACATTTGAAAATGTATTAATTTCCCAAA TTAATAGATAAATTAAATTGCCACATGGTGTGTCCCTCGAGTTAAAGTAT CTTTGCGGATGGACACGTTTAGCTGTATCTTCAGCAATGAATGATTTATA TACGTTTTCTTTCTTTATAGTTTCCGATCATCAGATTAGTAACGGCAATT TTACTGTTATTGGTGCTGCATGCGCCTGTATCTTCGTCGTGCTTCTCTCC TTCCTAACAGCGTTCTTATTGGCTCAAAGAAAGCATCGAGCAGCTAAAAA ACAAGCTAATCCACCGGCACCGGGACCCTCGATTGATGCAAACTGGAGAC TATCACAAGATGGTAGACAAGCTACGAGGGAAAGTCACCTTAACTCCGCT TATCAatattgattatttttgaaagatattttttatatGGTAGCTTAATC GAAGTAAAAAGCATTAGAAAATAATAATACACTATCTTTGATTTTGCTTA CAAACTTGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008053XLOC_008053Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014386-exon-sc0000187-1491911889:306186..306376TCONS_00014386-exon-sc0000187-1491911889:306186..306376Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:306186..306376TCONS_00014386-exon-sc0000187-1510915933:306186..306376Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:306186..306376TCONS_00014386-exon-sc0000187-1575043694:306186..306376Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:306812..306943TCONS_00014386-exon-sc0000187-1491911889:306812..306943Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:306812..306943TCONS_00014386-exon-sc0000187-1510915933:306812..306943Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:306812..306943TCONS_00014386-exon-sc0000187-1575043694:306812..306943Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:307621..307746TCONS_00014386-exon-sc0000187-1491911889:307621..307746Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:307621..307746TCONS_00014386-exon-sc0000187-1510915933:307621..307746Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:307621..307746TCONS_00014386-exon-sc0000187-1575043694:307621..307746Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:308208..308336TCONS_00014386-exon-sc0000187-1491911889:308208..308336Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:308208..308336TCONS_00014386-exon-sc0000187-1510915933:308208..308336Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:308208..308336TCONS_00014386-exon-sc0000187-1575043694:308208..308336Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:310674..310793TCONS_00014386-exon-sc0000187-1491911889:310674..310793Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:310674..310793TCONS_00014386-exon-sc0000187-1510915933:310674..310793Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:310674..310793TCONS_00014386-exon-sc0000187-1575043694:310674..310793Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:311313..311438TCONS_00014386-exon-sc0000187-1491911889:311313..311438Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:311313..311438TCONS_00014386-exon-sc0000187-1510915933:311313..311438Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:311313..311438TCONS_00014386-exon-sc0000187-1575043694:311313..311438Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:313054..313182TCONS_00014386-exon-sc0000187-1491911889:313054..313182Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:313054..313182TCONS_00014386-exon-sc0000187-1510915933:313054..313182Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:313054..313182TCONS_00014386-exon-sc0000187-1575043694:313054..313182Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:313839..313961TCONS_00014386-exon-sc0000187-1491911889:313839..313961Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:313839..313961TCONS_00014386-exon-sc0000187-1510915933:313839..313961Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:313839..313961TCONS_00014386-exon-sc0000187-1575043694:313839..313961Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:314566..314691TCONS_00014386-exon-sc0000187-1491911889:314566..314691Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:314566..314691TCONS_00014386-exon-sc0000187-1510915933:314566..314691Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:314566..314691TCONS_00014386-exon-sc0000187-1575043694:314566..314691Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:315736..315858TCONS_00014386-exon-sc0000187-1491911889:315736..315858Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:315736..315858TCONS_00014386-exon-sc0000187-1510915933:315736..315858Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:315736..315858TCONS_00014386-exon-sc0000187-1575043694:315736..315858Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:316288..316410TCONS_00014386-exon-sc0000187-1491911889:316288..316410Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:316288..316410TCONS_00014386-exon-sc0000187-1510915933:316288..316410Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:316288..316410TCONS_00014386-exon-sc0000187-1575043694:316288..316410Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:316829..317278TCONS_00014386-exon-sc0000187-1491911889:316829..317278Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:316829..317278TCONS_00014386-exon-sc0000187-1510915933:316829..317278Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:316829..317278TCONS_00014386-exon-sc0000187-1575043694:316829..317278Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:317804..317959TCONS_00014386-exon-sc0000187-1491911889:317804..317959Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:317804..317959TCONS_00014386-exon-sc0000187-1510915933:317804..317959Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:317804..317959TCONS_00014386-exon-sc0000187-1575043694:317804..317959Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1491911889:319756..320096TCONS_00014386-exon-sc0000187-1491911889:319756..320096Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1510915933:319756..320096TCONS_00014386-exon-sc0000187-1510915933:319756..320096Clytia hemisphaericaexon
TCONS_00014386-exon-sc0000187-1575043694:319756..320096TCONS_00014386-exon-sc0000187-1575043694:319756..320096Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000187supercontigsc0000187:306186..320096 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.138941 0 0 0 0 0 0 0.00182351 0.0087596 0 0 0 1.05611 0 0 5.81872 2.71256 0.757301 1.12207e-08 3.16513 4.75375 3.37157 0.175058 7.38232e-07 1.07452e-06 5.61758 7.86379 0 0.407181
Blast
BLAST of TCONS_00014386 vs. Swiss-Prot (Human)
Match: FBN1 (Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 1.297e-48
Identity = 154/446 (34.53%), Postives = 211/446 (47.31%), Query Frame = 2
Query:  305 GRKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQGNG--THCEDINECISATNETRCHEHAQCVNTNGSYTCQCLDGYHGNGTYCELLVCKE-DTC--NPF--HGEKCIIEDNHLKCTCAKGYFKGRKV--CEDINECRNAELHDCHTNAKCNNTIGAYQCTCLDGYHGNGTH--CINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFT--GDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQG--DGISCQDKNEC-LTPFLNECPQDSSCGNTIGSFQCPCNAGFEQNNGL--CIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFIGNGTFCRAKTCLDRSCPKYSYCSDLT--------GCHCNLGFLLNKTTSLCDQV 1564
            G+   +D+NEC    +   HG  KC N  G+++C C +GF  +    +C DI+EC  + +        QCVNT G + C+C +GY     +  +  C + D C  +P    G  C   +   +C C  G+     +  C DINEC     H C  N +C N IG YQC C  GYH       C++ + C      C T  T    +   SYEC C  GF    D   C D +ECE   N+C     C N  G Y C+C +GF    D  +C D NEC L P  N C    +C NT GSF C C+ G+    G   C D+NEC+   H C ++A+C NT GS++C C  G+ GDG  C D+DEC      C   A C NT+GSY C C E + G+G  C   T LD      + C +           C C++GF+ +     C+ +
Sbjct: 1022 GKPFFKDINECKMIPSLCTHG--KCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCG---RGQCVNTPGDFECKCDEGYESG--FMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACIDINECE-LSAHLC-PNGRCVNLIGKYQCACNPGYHSTPDRLFCVDIDECSIMNGGCETFCT----NSEGSYECSCQPGFALMPDQRSCTDIDECEDNPNICD-GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNP--NIC-LSGTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAHNCGKHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSQHADCKNTMGSYRCLCKEGYTGDGFTC---TDLDECSENLNLCGNGQCLNAPGGYRCECDMGFVPSADGKACEDI 1447          

HSP 2 Score: 153.295 bits (386), Expect = 8.623e-38
Identity = 142/417 (34.05%), Postives = 190/417 (45.56%), Query Frame = 2
Query:  206 ETEITCQTSCIHEYGETCLNDQSRCQCRDGFF--KGRKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQ--GNGTHCEDINECISATNETRCHEHAQCVNTNGSYTCQCLDGYHGNGTYCELLVCKEDTCNPFHGEKCIIEDNHLKCTCAKGYFKGRKVCEDINECRNAELHDCHTNAKCNNTIGAYQCTCLDGYHGNGTHCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFTGD--GSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGF--QGDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGFEQNNGLCIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGD--GKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFI 1426
            +  + C   C++ YG         C+C  G+   + R++C+D +EC     +      +C NL GTY C C  G+Q   +G  C D NEC   T    C E+ +C+NT GSYTC+C DG+  +    E L  +E  C              L+  C  G      V +    C        H          A++  C  G  G  T+  + + C+     C  N  CV+  D  SY C C  G+T D  G+ C D NEC      C  N  C NT GSY C C  G+  Q DG SC+D +EC T   N       C NTIG F C C  GF Q++  CID NEC +  + C    +CQNT GS+ C+C  GF  D  G +C DVDEC  N      Q  C N IG Y C+C + ++
Sbjct: 2212 QNPLLCAFRCVNTYG------SYECKCPVGYVLREDRRMCKDEDECEEGKHDCTEKQMECKNLIGTYMCICGPGYQRRPDGEGCVDENEC--QTKPGIC-ENGRCLNTRGSYTCECNDGFTASPNQDECLDNREGYCF----------TEVLQNMCQIGSSNRNPVTKSECCCDGGRGWGPHCEICPFQGTVAFKKLCPHG-RGFMTNGADIDECKVIHDVCR-NGECVN--DRGSYHCICKTGYTPDITGTSCVDLNECNQAPKPC--NFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHN---CQFLCVNTIGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTPGSFTCECQRGFSLDQTGSSCEDVDECEGNH---RCQHGCQNIIGGYRCSCPQGYL 2597          

HSP 3 Score: 148.673 bits (374), Expect = 2.426e-36
Identity = 135/422 (31.99%), Postives = 195/422 (46.21%), Query Frame = 2
Query:  275 RCQCRDGFFKGRK--VCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQGNGT-HCEDINECISATNETRCHEHAQCVNTNGSYTCQCLDGYHGNG--TYC-ELLVCKEDTCNPFHGEKCIIEDNHLKCTCAKGYFKGRK-VCEDINECRNAELHDCHTNAKCNNTIGAYQCTCLDGYH--GNGTHCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFTGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQ--GDGISCQD-----------KNECLTP-FLNECPQDSSCGNTIGSFQCPC-------NAGFEQ----NNGLCIDLNECQTQKHKCDQNALCQ-----NTHGSYRCQCFDGFYGDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENF 1423
            RC+C  GFF   K  VCED++EC +     C  NA+CIN  G+Y+C CK G++   T  C D NEC    N      H QC++T GS+ C C  G+  N   T C ++  C+ D C       C        C C  G+       C D++EC +   + C  N +C NT+G++QC C +GY    +G  C++ N C  +  KC+   TC +L    SY C C  G++     C+D +EC  +  +C L  TC NT GS+ C+C  GF     G  CQD             +C +P   N   Q+  C      +  PC       +  F Q     +G+ +  ++      +C +  +C+     NT GSYRC+C  G+   G  C D DEC  ++ +      C N IG + C C E F
Sbjct: 1790 RCECPVGFFYNDKLLVCEDIDECQNGPV--CQRNAECINTAGSYRCDCKPGYRFTSTGQCNDRNECQEIPNIC---SHGQCIDTVGSFYCLCHTGFKTNDDQTMCLDINECERDACG---NGTCRNTIGSFNCRCNHGFILSHNNDCIDVDECASGNGNLCR-NGQCINTVGSFQCQCNEGYEVAPDGRTCVDINECLLEPRKCAP-GTCQNLD--GSYRCICPPGYSLQNEKCEDIDECVEEPEICAL-GTCSNTEGSFKCLCPEGFSLSSSGRRCQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPYGSGIIVGPDDSAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDEC--SVGNPCGNGTCKNVIGGFECTCEEGF 2196          

HSP 4 Score: 147.902 bits (372), Expect = 4.393e-36
Identity = 111/274 (40.51%), Postives = 148/274 (54.01%), Query Frame = 2
Query:  626 CIIEDNHLKCTCAKGYFKGRK--VCEDINECRNAELHDCHTNAKCNNTIGAYQCTCLDGYHGNGT-HCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFT--GDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGF-QGDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGFE--QNNGLCIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENF 1423
            CI      +C C  G+F   K  VCEDI+EC+N  +  C  NA+C NT G+Y+C C  GY    T  C + N C+   + CS +  C+D     S+ C C+ GF    D + C D NECE   + C  N TC NTIGS++C CN+GF       C D +EC +   N C ++  C NT+GSFQC CN G+E   +   C+D+NEC  +  KC     CQN  GSYRC C  G+    + C D+DEC +    C +   C+NT GS+ C C E F
Sbjct: 1782 CINMVGSFRCECPVGFFYNDKLLVCEDIDECQNGPV--CQRNAECINTAGSYRCDCKPGYRFTSTGQCNDRNECQEIPNICS-HGQCIDT--VGSFYCLCHTGFKTNDDQTMCLDINECER--DACG-NGTCRNTIGSFNCRCNHGFILSHNNDCIDVDECASGNGNLC-RNGQCINTVGSFQCQCNEGYEVAPDGRTCVDINECLLEPRKC-APGTCQNLDGSYRCICPPGYSLQNEKCEDIDECVEEPEIC-ALGTCSNTEGSFKCLCPEGF 2044          

HSP 5 Score: 125.946 bits (315), Expect = 3.233e-29
Identity = 129/382 (33.77%), Postives = 183/382 (47.91%), Query Frame = 2
Query:  275 RCQCRDGF-FKGRKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQGN--GTHCEDINECISATNETRCHEHAQCVNTNGSYTCQCLDGYH--GNGTYCELLVCKEDTC---NPFHGEKCIIEDNHLKCTCAKGY--FKGRKVCEDINECRNAELHDCHTNAKCNNTIGAYQCTCLDGYHG--NGTHCINT---NTC--EYQRSKC-------STNATC---------------VDLSDSSSYECHCNQGFTGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQGD--GISCQDKNECLTPFLNECPQDSS-CGNTIGSFQCPCNAGFEQNNGL--CIDLNECQTQKHKCDQNALCQNTHGSYRCQC 1288
            RC+C  GF    R  C D++EC     N C G  +CIN  G+Y C C+ G+Q     T C DI+EC+      R   + +C+NT+GS+ C C  G+H   +G  CE +    D C   N      CI ED   KC C  G+      + C+DINEC    +     N +C NT G+Y+C C  G     +G  C++T   +TC   Y+R +C        T + C                   +S+ Y+  C+ G  G  S   D NEC    ++C  N  C N  G+Y C+CN+G++ D  G +C D NEC+   LN    D+  C NT GSF C C  GF     L  C D++EC++       N +C+N+ GS+ C+C
Sbjct:  473 RCECNKGFQLDLRGECIDVDECEK---NPCAG-GECINNQGSYTCQCRAGYQSTLTRTECRDIDECL---QNGRICNNGRCINTDGSFHCVCNAGFHVTRDGKNCEDM----DECSIRNMCLNGMCINEDGSFKCICKPGFQLASDGRYCKDINECETPGI---CMNGRCVNTDGSYRCECFPGLAVGLDGRVCVDTHMRSTCYGGYKRGQCIKPLFGAVTKSECCCASTEYAFGEPCQPCPAQNSAEYQALCSSG-PGMTSAGSDINECALDPDICP-NGICENLRGTYKCICNSGYEVDSTGKNCVDINECV---LNSLLCDNGQCRNTPGSFVCTCPKGFIYKPDLKTCEDIDECESSPCI---NGVCKNSPGSFICEC 832          

HSP 6 Score: 125.561 bits (314), Expect = 3.678e-29
Identity = 149/521 (28.60%), Postives = 213/521 (40.88%), Query Frame = 2
Query:  275 RCQCRDGF--FKGRKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQG--NGTHCEDINECISATNETRCHEHAQCVNTNGSYTCQCLDGYHGNG--TYC-ELLVCKEDTCNPFHGEKCIIEDNHLKCTCAKGYFKGRKVCEDINECRNAELHDCHTNAKCNNTIGAYQCTCLDGYHGNGTHCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGF--TGDGSHCKDENECESKDNLCH----------------------------------------LNATCYNTIGSYHCVCNNGFQGDG--ISCQDKNECLTPFLNECPQ----DSSCGNTIG-------------------------------SFQCPCNAGFEQNNGLCI--DLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFY--GDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFIG-NGTFCRAKTCLDRS---CPKYSYCSDLTGCHCNLGFLLNKTTSLC 1555
             C C+ GF     ++ C D++EC   + N C G  +C N+ G Y+C C +GF    +   C D+NEC    N   C     C NT GS+ C C  GY G    T C ++  C+    N      C       KC+C+ G+      C D++EC N   H C  +A C NT+G+Y+C C +GY G+G  C + + C    + C  N  C  L+    Y C C+ GF  + DG  C+D +EC S  N+C                                         ++  C NT GSY C C   F+ +   + C D       +L+  P+    D++C N IG                                  CP   GF  N    I  D++ECQ     C Q   C NT GS++C+C  G+Y   D + C DV+EC            C NT+G+YTC C  +++  NG       C+D     C +  Y  + T   C+   L N T  +C
Sbjct: 1220 ECSCQPGFALMPDQRSCTDIDECED-NPNICDG-GQCTNIPGEYRCLCYDGFMASEDMKTCVDVNEC--DLNPNICLS-GTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAHNCGKHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNG-THMCSQHADCKNTMGSYRCLCKEGYTGDGFTCTDLDECSENLNLCG-NGQC--LNAPGGYRCECDMGFVPSADGKACEDIDEC-SLPNICVFGTCHNLPGLFRCECEIGYELDRSGGNCTDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRS-GNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLC-QGGKCINTFGSFQCRCPTGYYLNEDTRVCDDVNECE--TPGICGPGTCYNTVGNYTCICPPDYMQVNG----GNNCMDMRRSLCYRNYYADNQT---CDGELLFNMTKKMC 1719          

HSP 7 Score: 122.865 bits (307), Expect = 2.411e-28
Identity = 110/312 (35.26%), Postives = 154/312 (49.36%), Query Frame = 2
Query:  419 GFQGNGTHCEDINECISATNETRCHEHAQCVNTNGSYTCQCLDGYHGN--GTYC-ELLVCKE--DTCNPFHGEKCIIEDNHLKCTCAKGYF--KGRKVCEDINECRNAELHDCHTNAKCNNTIGAYQCTCLDGYHGNGTHCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFTGD--GSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGF--QGDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGF--EQNNGLCIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGDGK 1315
            GF  NG    DI+EC    +  R   + +CVN  GSY C C  GY  +  GT C +L  C +    CN      C   +   +C+C KGY   +  + C+D++EC   + H+C     C NTIG + C C  G+  + T CI+ N C    + C +   C +     S+ C C +GF+ D  GS C+D +ECE      H    C N IG Y C C  G+        C D+NECL+  +      +SC NT+GS++C C AGF  EQ +G C D+NEC + +  C     C NT G Y C C  G++  G+
Sbjct: 2395 GFMTNGA---DIDECKVIHDVCR---NGECVNDRGSYHCICKTGYTPDITGTSCVDLNECNQAPKPCNFI----CKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQ-HNCQ--FLCVNTIGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTP--GSFTCECQRGFSLDQTGSSCEDVDECEGNHRCQH---GCQNIIGGYRCSCPQGYLQHYQWNQCVDENECLSAHIC---GGASCHNTLGSYKCMCPAGFQYEQFSGGCQDINECGSAQAPCSYG--CSNTEGGYLCGCPPGYFRIGQ 2683          

HSP 8 Score: 114.005 bits (284), Expect = 1.396e-25
Identity = 124/409 (30.32%), Postives = 187/409 (45.72%), Query Frame = 2
Query:  494 EHAQCVNTNGSYTCQCLDGYHGN--GTYCELLVCKEDTCNPFHGEKCIIEDNHLKCTCAKGYFK--GRKVCEDINEC-RNAELHDCHTNAKCNNTIGAYQCTCLDGYH--GNGTHCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGF--TGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQG--DGISCQD------------KNECLTPFLNECPQ-DSSCGNTIGSFQCPCNAGFEQNN----GLC----------IDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGD--GKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFIGNGTF--------CRAKTCLDRSCPKYSYCSDLTGCHCNLGFLLNKTTSLCDQVKTGS 1576
            ++ +C+ T GS  C+C  G+  +  G   ++  C++   NP  G +CI       C C  GY     R  C DI+EC +N  + +   N +C NT G++ C C  G+H   +G +C + + C   R+ C  N  C++  +  S++C C  GF    DG +CKD NECE+   +C +N  C NT GSY C C  G     DG  C D            + +C+ P      + +  C +T  +F  PC     QN+     LC           D+NEC      C  N +C+N  G+Y+C C  G+  D  GK C D++EC  N   C +   C NT GS+ C C + FI             C +  C++  C K S  S +  C C+    L+ T ++C +   G+
Sbjct:  461 QNGRCIPTPGSCRCECNKGFQLDLRGECIDVDECEK---NPCAGGECINNQGSYTCQCRAGYQSTLTRTECRDIDECLQNGRICN---NGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSI-RNMC-LNGMCIN--EDGSFKCICKPGFQLASDGRYCKDINECETP-GIC-MNGRCVNTDGSYRCECFPGLAVGLDGRVCVDTHMRSTCYGGYKRGQCIKPLFGAVTKSECCCASTEYAFGEPCQPCPAQNSAEYQALCSSGPGMTSAGSDINECALDPDIC-PNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDN-GQCRNTPGSFVCTCPKGFIYKPDLKTCEDIDECESSPCINGVC-KNSPGSFI--CECSSESTLDPTKTICIETIKGT 852          

HSP 9 Score: 99.7525 bits (247), Expect = 3.209e-21
Identity = 130/442 (29.41%), Postives = 181/442 (40.95%), Query Frame = 2
Query:  278 CQCRDGFFKGR--KVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQ--GNGTHCEDINECISATNETRCHEHAQCVNTNGSYTCQCLDGYHGNGTYCELLVCKEDTCNPFHGEKCIIEDNHLKCTCAKGYFKGRKVCEDINE-------CRNAELHDCHTNAKCNNTIGA-YQCTCLDGYHGNGTHCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFTGD--GSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGF--QGDGISCQDKNEC-LTPFLNECPQDSSCGNTIGSFQCPCNA--GFEQNNGLCIDLNECQTQKHKCDQNAL-----------------CQNTHGSYRCQC----FDGFYGDGKT------CHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFIGNGTFCRAKTCLD 1465
            C C  GF   R  K CED++EC   S  +   N  CIN  G+++C CK GFQ   +G +C+DINEC +         + +CVNT+GSY C+C  G                      G  C+  D H++ TC  GY +G+ +             C + E         C     A YQ  C  G  G  +   + N C      C  N  C +L    +Y+C CN G+  D  G +C D NEC     LC  N  C NT GS+ C C  GF  + D  +C+D +EC  +P +N       C N+ GSF C C++    +    +CI     +T K  C Q  +                 C +   ++   C     D   G G +      C D+DEC      C +   C NT GS+ C C      + T    + CLD
Sbjct:  555 CVCNAGFHVTRDGKNCEDMDEC---SIRNMCLNGMCINEDGSFKCICKPGFQLASDGRYCKDINECETPG----ICMNGRCVNTDGSYRCECFPGLAVG----------------LDGRVCV--DTHMRSTCYGGYKRGQCIKPLFGAVTKSECCCASTEYAFGEPCQPCPAQNSAEYQALCSSG-PGMTSAGSDINECALDPDICP-NGICENLR--GTYKCICNSGYEVDSTGKNCVDINECVLNSLLCD-NGQCRNTPGSFVCTCPKGFIYKPDLKTCEDIDECESSPCIN-----GVCKNSPGSFICECSSESTLDPTKTICI-----ETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDAT---GRICLD 952          

HSP 10 Score: 92.4337 bits (228), Expect = 5.620e-19
Identity = 136/500 (27.20%), Postives = 197/500 (39.40%), Query Frame = 2
Query:  275 RCQCRDGFFKGRKV--CEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQGNGTHCEDINECISATNETRCHEHAQCVNTNGSYTCQ------------CLDGYHGNGTYCEL----------LVCKE----------------DTCNPF----HGEKCIIEDNHLKCTCAKGYF--KGRKVCEDINECRNAELHDCHTNAKCNNTIGAYQCTCLDGYH--GNGTHCINTNTCEYQRSKCSTNATCVD--LSDSSSYECHCNQGFTGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQGDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGFEQNNGL--CIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGF-YGDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFIGNG--TFCRAKTCLDRSCPKYSYCSDLTG---CHCNLGFLL--NKTTSLCDQVKTGSGILVQN 1594
            RC+C  G+   R    C D+NEC  P+T     +  C+N  G+Y C C   F+ N T    ++     T    C+   +    NG   C             C       GT CE+          ++C                  D C        G KCI      +C C  GY+  +  +VC+D+NEC    +    T   C NT+G Y C C   Y     G +C++       R+  + N TC    L + +   C C+       +   ++    S D    L   C +    +      G   D   C++      P + E   +  C N +GSF+C C  GF  N+ L  C D++ECQ     C +NA C NT GSYRC C  G+ +     C+D +EC Q I +  S   C +T+GS+ C C   F  N   T C      +R       C +  G   C CN GF+L  N      D+  +G+G L +N
Sbjct: 1469 RCECEIGYELDRSGGNCTDVNECLDPTTCI---SGNCVNTPGSYICDCPPDFELNPTRVGCVD-----TRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCDDVNECETPGICGPGT---CYNTVGNYTCICPPDYMQVNGGNNCMDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIPSTDEFATL---CGSQRPGFVIDIYTGLPVDIDECRE-----IPGVCE---NGVCINMVGSFRCECPVGFFYNDKLLVCEDIDECQNGP-VCQRNAECINTAGSYRCDCKPGYRFTSTGQCNDRNEC-QEIPNICSHGQCIDTVGSFYCLCHTGFKTNDDQTMCLDINECERDACGNGTCRNTIGSFNCRCNHGFILSHNNDCIDVDECASGNGNLCRN 1944          
The following BLAST results are available for this feature:
BLAST of TCONS_00014386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBN11.297e-4834.53Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3[more]
back to top