TCONS_00014384 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014384
Unique NameTCONS_00014384
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2161

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014384 ID=TCONS_00014384|Name=TCONS_00014384|organism=Clytia hemisphaerica|type=transcript|length=2161bp
ATGAATTTGTGTGATGCTATGCGAAAATAACTGTAACAAAAGTATGACTT
TTTCTCTCATTTGTTGACAAAAATGAAATGATGTTGTCACAGAACCATAT
TTTAAAGAGACGAATGTTTAAAGATGGCGGATGAGCTGCCAGTTGATCAT
GAATTTGTTGATATTATTGTCTgttctaatttttgaaaaagCTATCCTTA
CATTAGCTACTGCAACCAATGAAACCGAGATCACGTGTCAAACATCATGC
ATACATGAATATGGTGAAACGTGTCTGAATGACCAATCACGATGCCAATG
TCGTGATGGCTTCTTCAAAGGTCGAAAAGTATGTGAAGACTTGAACGAAT
GTGCTTCGCCATCAACTAACGATTGTCATGGCAACGCCAAATGTATCAAT
CTATTTGGAACATATCAATGCACATGTAAAAATGGTTTTCAGGGGAATGG
AACCCACTGTGAAGATATTAATGAATGCAGAAATGCTGAACTTCAAGATT
GTCATACTAACGCCAAATGCAACAATACCATTGGTGCATATCAATGCACG
TGTTTAGATGGTTACCATGGAAATGGCACGTATTGTATCAATACGAACAC
GTGTGAATACCAAAGATCAAAATGCTCCACGAACGCTACATGTGTAGATC
TTTCTGACTCTTCTTCTTACGAATGTCATTGCAATCAAGGCTTCACTGGA
GATGGCTCACATTGTAAAGATGAGAATGAATGTGAAAGCAAAGATAACTT
GTGTCATTTGAATGCCACGTGCTACAATACGATTGGTTCGTATCATTGTG
TTTGCAACAATGGCTTCCAAGGTGATGGGATCAGTTGTCAAGATAAAAAC
GAATGCCTTACACCTTTCCTGAACGAATGTCCACAAGATTCATCTTGTGG
GAACACAATTGGAAGCTTTCAATGTCCCTGCAACGCTGGATTCGAACAAA
ATAATGGCTTATGTATTGATCTTAACGAATGTCAGACACAGAAACACAAA
TGCGATCAGAATGCACTTTGTCAAAATACCCACGGTTCATATCGTTGCCA
ATGCTTTGATGGTTTCTATGGTGATGGAAAGACTTGCCATGatgtTGATG
AATGCCatcaaaatatttcagattGTCATTCACAAGCTCATTGCACAAAT
ACTATTGGTTCTTATACTTGCGCATGTGCAGAAAACTTTATCGGAAATGG
AACTTTTTGTAGAGccaAAACATGCTTGGATAGAAGCTGCCCTAAATACT
CATATTGCTCCGATCTAACTGGTTGTCATTGTAACTTGGGTTTCCTATTG
AACAAAACCACATCTTTGTGTGATCAGGTGAAAACTGGGTCAGGTATCTT
GGTTCAGAATCTGCACCTCAAAGAAGACTTCAAAGAGGAATATTTGGATA
AATCATCACAAGAATATATACAATTCATTGCTCGTTTGGAATCAACATTA
CTTAAGTTCATGACAGTTGTCTACCCTTGGGTTGCACCATTATCTGTTAA
CGTAAAAGACCTACGACGTGGGAGTGTGGTTGTTGATTACGTGGTTACGT
ATGCGACGGATGACGAACTGAGTCTTGACGTAATGAAACGGGAGATCGAG
TATGGCTTGTTACGTAACCAGTTAGAAGTATTTGAAACGACAAGAAAAAC
TGTACAAGTTTCAAGCACTAATGGCTGCAATCTTGGCTTTCCAAAATGTA
ATAGCATTACAGAGTCTTGTCAACCATTGGCAGGATTTGATTATGATTGT
GTTTGTAAAATGAACTTCACACGTTCATCTCACAATGGAAAATGTTCAAA
GATTACTGGATCTCCTATTTTTTCCGATCATCAGATTAGTAACGGCAATT
TTACTGTTATTGGTGCTGCATGCGCCTGTATCTTCGTCGTGCTTCTCTCC
TTCCTAACAGCGTTCTTATTGGCTCAAAGAAAGCATCGAGCAGCTAAAAA
ACAAGCTAATCCACCGGCACCGGGACCCTCGATTGATGCAAACTGGAGAC
TATCACAAGATGGTAGACAAGCTACGAGGGAAAGTCACCTTAACTCCGCT
TATCAatattgattatttttgaaagatattttttatatGGTAGCTTAATC
GAAGTAAAAAGCATTAGAAAATAATAATACACTATCTTTGATTTTGCTTA
CAAACTTGGAC
Run BLAST on NCBI

transcript from alignment at sc0000187:306186..320096+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014384 ID=TCONS_00014384|Name=TCONS_00014384|organism=Clytia hemisphaerica|type=transcript|length=13911bp|location=Sequence derived from alignment at sc0000187:306186..320096+ (Clytia hemisphaerica)
ATGAATTTGTGTGATGCTATGCGAAAATAACTGTAACAAAAGTATGACTT TTTCTCTCATTTGTTGACAAAAATGAAATGATGTTGTCACAGAACCATAT TTTAAAGAGACGAATGTTTAAAGATGGCGGATGAGCTGCCAGTTGATCAT GAATTTGTTGATATTATTGTCTgttctaatttttgaaaaaggtatgtact tttctttctttcacaTTTAAACTAAACCTTCTTTAacagaaaaatgtttt aattttcaccatattgtgagtatttttgtccattttcctaagaaaaaggg tccataaagccttaaaatgttcttaactagcTCTTAATATTTCGGCCATA GAAGTATTATCTTCTcataatacaatttttttataaaaacaaactatata agaacataaggcttcgctgcccaaaatgttaagaacattttaaggcttta tggactcaaaaacaccctatttcttgggaaaatggtaaaaaacattcaca aaatggtcaaagtaagaacatgttacgaatgtttttaggcttaaaactca aaaagttaaaggcttcaaaaattttggatgttcttataacaaaaatgtGT ATACTTTTTAGCTATCCTTACATTAGCTACTGCAACCAATGAAACCGAGA TCACGTGTCAAACATCATGCATACATGAATATGGTGAAACGTGTCTGAAT GACCAATCACGATGCCAATGTCGTGATGGCTTCTTCAAAGGTCGAAAAGT ATGTGAAGGTGTGTATTTAAATGCTTAAGGATCAGGTCCGGTTATCGTGG TCGCTGGTTGGATTCTTTAACAGTTCTGTTCACTGTTAAAGAATCCAACC AGCGACCACGATAACCGGACCTGATCCGATTTTAATGACGATATGGCGTA TCAGCTCACTGAAATGCTTACTgataacccagctggcacacaacgttgtt tcaacgctcatataacgttatatggacgttacgAACATTAGATAAatgtt gaaacgacgttgtgtgccggctagGAAGGCCAAATGCAACGTGAAtaaaa gcctgggatacacaggGACTAGTTTGCCGTTCTAAATCTAAGAAGTCACC TCAAAATGCAGCGTCCCTaattattttcagaaaattgagcCTCCACAAAA TCGAAGTCACTACATGTTTGTTAGGTTTGTAGATTTAATATGTCATGTTT TATGACGATATATATGTAACGAAATGTTTTGACGCCATTGGATTCTTCGA AGATCGAGCCCCGAGTCGAGCCCAATCCCCTAGGGGTGTTGGGGTAGAAT TATGTGTATTGATATGTGGTTTTCCGAAAGATTGGATCTGAAAAGGGCTT CATTTAGActatatttcaactttttgttcTGGAAAAACCCTGGTGTAGTA AGCAATATATTCTCATTTTTTCACATCACCAACAGACTTGAACGAATGTG CTTCGCCATCAACTAACGATTGTCATGGCAACGCCAAATGTATCAATCTA TTTGGAACATATCAATGCACATGTAAAAATGGTTTTCAGGGGAATGGAAC CCACTGTGAAGGTATTTCGTTCATCCACCTGATTTTGTGGGGCAAGCTTC TTCCCATAATCATTATTAAGATTATACCTTGACTTGGAATGTGGACTTTT GAGCCTcaatcaaattgttcttatcctgttcttatttatagggggAAATT GAAGTATTTTAGGCTTTATATCCAACTTTAATACTTTGACCCctgaattg cttgaaattgagtaattacaggctcagcattgttcttaaattgttctcat cttttagcgattttgagctTCATTGAAAACCAAGCCTTCAGATGCTTTTT AACTTCCTTAGTTTAAGGCtaaaactgttcttattttcaccattttgttt gTAAAACTGAGAACTTAGTGGCGTTGGTACCGGAATTCTTCAGTTTAACT TTTACCGAGACTTTTGATGAGGTGAGCAAAGAATTTGCGCAAGataatga aattgtttttcctTCAATTTAGATATCAACGAGTGTATTTCCGCCACTAA TGAAACCAGATGTCACGAGCATGCGCAATGCGTCAACACTAATGGATCAT ACACGTGTCAATGCTTAGATGGTTACCATGGCAATGGGACTTATTGTGAA CGTTAGACAAATTTCATTATTCTTTGTTTCTTCGAAAAGCTGATCTTGAA CTTTATCATCACTTTTAACGTGTTTTCTAATAGATTTACATTTCGAGTGT TATACTTTAGGACGGTCGTTTTTCGTACCCATATCAGGGAAATAAGTCGA AACGGAGGAAAAAGTCGCGAGTTTAGCTTGAAAATAACTATGATAAGCGA ACGTAGTGAGTGTAAGGCAAGTGCTAGCTACATTATCCTAGGCGACTATT TTGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNaaacaaacaaacaaacaaacaagtaTTTTT CGATTACTAGTTTTGGTTTGTAAAGAAGATACATGCAATCCATTTCACGG TGAAAAATGCATCATTGAAGACAATCATCTCAAGTGTACATGCGCAAAGG GATACTTCAAAGGACGGAAAGTTTGTGAAGGTTtgacttgattttcttta aaaacattcCAGAACTAGTAAGGTTTGGCTGACACTCGGCTGATTCTTAG GATTAAAAAACGTTCTTGATATTGGTTATTTCAGGCTCTTAATTTGTCCT TAAGTTTTAGTCAAAATTGAGCCTcttatttcaaaaacttttgtcgtgaa agAGCCTGTTAAAGTATATTACACTTTACACATCGAAAATTGATTATAAT AAGTAGCTAAATGATAAGTAGTCCTACAAAAATATTGAGTTTTTAAATCC ACAGATTTCAACGAATGTGCATCACCATTAAATAATGATTGTCATGACAA CNGCGTTGTTACCGGAAATCTTCATTATAACTTTTACCAAGACTTTTGAT GAGATGAGCAAAGAAAGAATTTGCGCAAGataatgaaattgtttttcctT CAATTTAGATATCAACGAGTGTATTTCCGCCACTAATGAAACCAGATGTC ACGAGCATGCGCAATGCGTCAACACTAATGGATCATACACGTGTCAATGC TTAGATGGTTACCATGGCAATGGGACTTATTGTGAACGTTAGACAAATTT CATTATTCTTTGTTTCTTCGAAAAGCTGATCTTGAACTTTATCATCACTT TTAACGTGTTTTCTAATAGATTTACATTTCGCGTGTTATACTTTAGGACG GTCGTTTTTCGTACCCATATCAGGAAAATAAGTCGAAACGGAGGAAAAAG TCGCGAGTTTAGCTTGAAAATAACTATGATAAGCGAACGTAGTGAGTGTA AGGCAAGTGCTAGCTACATTATCCTAGGTGactattttgataatttttat acGAGTACCATTCTATTGCAAAACCACTTCCAGTTTCCtttaatgaaaaa acaaacaaacaaacaaacaagtaTTTTTCGATTACTAGTTTTGGTTTGTA AAGAAGATACATGCAATCCATTTCACGGTGAAAAATGCATCATTGAAGAC AATCATCTCAAGTGTACATGCGCAAAGGGATACTTCAAAGGACGGAAAGT TTGTGAAGGTTtgacttgattttctttaaaaacattcCAGAACTAGTAAG GTTTGGCTGACACTCGGCTGATTCTTAGGATTAAACGTTCTTGATATTGG TCATTTCAGGCTCGGACCGTTCTTAATTTGTCCTTAAGTTTTAGTCAAAA TTGAGCctcttatttcaaaatctttctcgTGAAAGAGCCTGTTAAAGTAT ATTACACTTTACACATCGAAAATTGATTATAATAAGTAGCTAAATGATAA GTAGTCCTACAAAAAATATTGAGTTTTTAAATCCACAGATTTCAACGAAT GTGCATCACCATTAAATAACGATTGTCATGACAATGCAAAATGCATTAAT CTATTTGGTTCATATCGATGCACATGTGAAAATGGTTTTCAGGGGAATGG AACCCACTGTGAAGGTAACTTTTTTTTACAATGTGGAAACCATGTAAAAC ATATTTAAACTAAAATTCCCTTGTGCTTTCTGAAGGGAGCATTGAAATAA AAGCTTATTTTATCTTACTTTGACCAGATATTAATGAATGCAGAAATGCT GAACTTCACGATTGTCATACTAACGCCAAATGCAACAACACCATTGGTGC ATATCAATGCACGTGTTTAGATGGTTACCATGGAAATGGTACGCATTGTA TCAGTAAGTAAAATTCAAAATCGATNAACGGAGGAAAAAGTCGCGAGTTT AGCTTGAAAATAACTATGATAAGCGAACGTAGTGAGTGTAAGGCAAGTGC TAGCTACATTATCCTAGGCGACTATTTTGATAGTTTTTATACGAGTACCA TTCTACTGCAAAACCACTTCCAGTTTCCTTTAAtgataaaacaaacaaac aaacaaacaaacaagtaTTTTTCGATTACTAGTTTTGGTTTGTAAAGAAG ATACATGCAATCCATTTCACGGTGAAAAATGCATCATTGAAGACAATCAT CTCAAGTGTACATGCGCAAAGGGATACTTCAAAGGACGGAAAGTTTGTGA AGGTTtgacttgattttctttaaaaacattcCAGAACTAGTAAGGTTTGG CTGACACTCGGCTGATTCTTAGGATTAAACGTTCTTGATATTGGTCATTT CAGGCTCGGACCGTTCTTAATTTGTCCTTAAGTTTTAGTCAAAATTGAGC CTCTTATTTCAAAATCTTTCTCGTGAAAGAGCCTGTTAAAGTATATTACA CTTTACACATCGAAAATTGATTATAATAAGTAGCTAAATGATAAGTAGTC CTACAAAAAATATTGAGTTTTTAAATCCACAGATTTCAACGAATGTGCAT CACCATTAAATAACGATTGTCATGACAATGCAAAATGCATTAATCTATTT GGTTCATATCGATGCACATGTGAAAATGGTTTTCAGGGGAATGGAACCCA CTGTGAAGGTAACTTTTTTTTACAATGTGGAAACCATGTAAAACATATTT AAACTAAAATTCCCTTGTGCTTTCTGAAGGGAGCATTGAAATAAAAGCTT ATTTTATCTTACTTTGACCAGATATTAATGAATGCAGAAATGCTGAACTT CAAGATTGTCATACTAACGCCAAATGCAACAATACCATTGGTGCATATCA ATGCACGTGTTTAGATGGTTACCATGGAAATGGCACGTATTGTATCAGTA AGTAAAATTCAAAATCGATattttggaactaattttgcgagttttttatc aaaaaaaattcaaatatcaaaagaaGTTTCTCgccaaattgattttttta caaTTGTTGCTGGTTGCCAGAATTAGTTCCCTTAGTTTCCCTTATTGCCC GTTGACTTATTTTGATGAAGTTCCATTCATCATCACTTTCATATTACTCA AGTTTTTTCAAACGTCGGCAGTTTGAACATTACGATGTATTCTTCTTTGA CAATGCAAGGTACAGTTGCCTCTCCccaattcgatcttcaagggaccaag agttttcttcgaattagagatgAATTCGGATTATAGAGTGTTTTACGTTA CTTTCCAGCTAAGTGAActaatgttttagttcgaatcatagaggttcgag taagagagagttgactgtagcGATTGAAAAGTAATGCCGGAGAAATAATT CTGCGCAAAAATATAACTTTAGCCTTTGGTAagttattttttagattttg aaaaaggaaGCTCGTATACTAAgatataaaaatctaaaatttcattcttc tttCGCCCGAAAATTTCCCAAATACTTTTAAATTTGTAACAACTAACTTT TTCCATCTGTTTTTTAAGATACGAACACGTGTGAATACCAAAGATCAAAA TGCTCCACGAACGCTACATGTGTAGATCTTTCTGACTCTTCTTCTTACGA ATGTCATTGCAATCAAGGCTTCACTGGAGATGGCTCACATTGTAAAGGTT TGTTTCAGATATCCATCGTATCGTTGTGTTTCAACATTATTATGATGCCA ATTTAACTTTAGGTTGGACAATATATatatacatgcttttttttatcgtt aaagaaaaatgtgttatgttttattttgatttggttgcACATCACAAggc tttttatgtttcacttacattctttttttatatacatatcctggatattc tcaacttttttgggaaaatcatctaaatattcttacggtactTTTAGGTT AAATTCAACccaaattaaaaatgtaaaacacacctgaaacaaaaaatggt atttttttgaaagtattgaGCCTTACTAGGCAAAATGTCAATCAATAATC AATCCACATGcagtgatattcttagcatgttcttaaatttttggccaatc atatcatgaatattcttatagagttcattcttataaaaatgtgttTAAAC GTAATTTTGACGTTTTGGCAGCTAGCTTCTTTAGGAAAATGATAACTAGC TTTAATAGCCATTAGTCTGTAATATTTATTGCTTTTTTCTACAGTGTTTT TTATCGGTGGCAAATTATGATTGATAAGCTTTGAAGTCTGATGGAATTTA GTTTACGAGATTGACTACaggtttttcttcttcttttcttcaccTTCACA CAGATGAGAATGAATGTGAAAGCAAAGATAACTTGTGTCATTTGAATGCC ACGTGCTACAATACGATTGGTTCGTATCATTGTGTTTGCAACAATGGCTT CCAAGGTGATGGGATCAGTTGTCAAGGTTAGTCTATATATTGACACCCCT TTCCATTGTGGAACTCATCAAATAggggaaatgaaaatttctatcaaaat tcaaatggggatagaaattttgttgttctcaggttaaaaaatccagtgag gatggtTTTGAGGTGCAATTTGTTCTATCGAATTCATCGAAGTCAATTTC ATTGGGGCAGATATAATTAGAGGgtgattggaggtttttttTAGACTTTT GAATTATCAGTTCTCAgcctaaaaagagaaaaaaattgtcaaaaatgttC CTTGGGGGTGCCTAAATcccaactttcaaaaattgCCTCCCCATCTTGCA TTGTTTGTCAACCAGCCACGCTACTGTTACAGGAGGCTAGAAGCTACTGT TTTAATGCTACTAAACATTGAGCACGTCGCTCCCCTCGTCTACTACGAAC TAGTGTAATAGCAACGAACCGATAGCAcagttgggagagcaatcgcccgg caagcgagaggtcgtgggCTCAAttcccactcgattcgttacctttgaga aaactgggaagtacattagtgcaggatccgttgattcattacctaTAATG CTactaaaatttctttattttatacCGTAGATAAAAACGAATGCCTTACA CCTTTCCTGAACGAATGTCCACAAGATTCATCTTGTGGGAACACAATTGG AAGCTTTCAATGTCCCTGCAACGCTGGATTCGAACAAAATAATGGCTTAT GTATTGGTAAATTGCAATAAAATCCttcattaattaatttttttttcttc ataaaaaccATAATGAAGTGTTTCTGAGGTTCAGTCGTTGGTTGTTCTTA CAATAAACGCATGTTTGAAAAGGGACTGAAAATTACAATTTTGGCATTTT CTGTAGTCgagggacgagtttttcgccaaaacgagaaattttgcacactt gatccttgggcaaatccctggggtgattttttcatttttttaaaattttg atttttggggcctggggacgagtttttcgccaaaacgaggctaaaaccca aaatgctataatttttctaaagccattaagtttacaattgggcctacgaa tgatttcaaagatactgaagttgagccagtgcggttagcacgttcgacag ttcagaaatagtagaaataaagccaaaaagtaatggagggaacaatttta gtttatacaaactaaatctcgtaacaataatcgtattactATATAACACC TacactactgtattacacgcattacaaacgactccagtctacattTTCTG ATGAATCGAATATTTTTGGTTTGTCATTACATTTGGATCATTATCGAACC TCGTATTCATGTAAGATTGTCCAAAAACCTGTAAAATGATGCGGACCTTG ACAGGGTGTCaggaaaacgtctcggtaatgacctaaatggtcgttcaaat cttttataaatctattcaaagcggctttccTTTGATGTACCACCATTTGG atacaaaaaacatcaatttataactttataagaacatagaGAGCCttatc tgttcttataaagttataaattgatgttttttgcatCTAAATGGTGGTAC ATCAAAGGAAAGCCGCTTCAGAGAGAGCCTTATCCGTTGATttagaaaaa cttaatttttcaTCTATCGATGATTTTGGGGGTATTGTGAAGGAATAGAA TAAAAggcgttttctctccatctatttTTATTACCTTCGTGATCTATTTT ATTGGTGTCTACTTAAAAAGTCtattacttttttacttttttgttgttaG ATCTTAACGAATGTCAGACACAGAAACACAAATGCGATCAGAATGCACTT TGTCAAAATACCCACGGTTCATATCGTTGCCAATGCTTTGATGGTTTCTA TGGTGATGGAAAGACTTGCCATGGTAACGGGgttttgatagttttttcag gaccagttttaaaaatttatatgGGCTAAAAAAATTTAGGTGAAAAAACC CTTATAAGATTTTATTGAATTAGTATGAGCTATTAAGTTAAATACAGGTA TAGACAAGAAGAGAGATAATTAGGAAAAAAGGGTTCTGGGTGTGTGACAA CAgtaaaattcgttttttttcacCCTCCCAAGAATCTCGAAGggttacaa aaaaaaatcagaatagCCACTCTAAGATTAGgaagtttttcgaaaatttt ctctcTAAGAGTAAGTTTTTCGTAAGAATTCCCAAGTCTTTTCAAGGTTC TGCTTTTAGAGGTCAGGTTCACACATACCCGATATTCTTCAAACCTGTCC CCCCTACGGTTCCCAGCGAAATAGATCAACAAAatctcttttcatttttc agatgtTGATGAATGCCatcaaaatatttcagattGTCATTCACAAGCTC ATTGCACAAATACTATTGGTTCTTATACTTGCGCATGTGCAGAAAACTTT ATCGGAAATGGAACTTTTTGTAGAGGTAAAGGGTTACAAATtcaaataca gttgactctctctaattcgaactcgaataGGTgatctaatttgttcgaat tatagaaagtgtCTTACTCAGGTTTATTGAAGGGGAATGATAATTAATTC GAACtatagaaaaattcgaatgatagaagttcgaattagcgagagttgaC TGATATGGAGATTTAAAATGTTATCACAGAATGCCGTATTTATATCAAAC TTTGCACATCAACTCTTAATTCATAAAACACATAAACCTCACGAACTAAA ATCTCTCAATTTTGACACCATTTATTGATGTCCTattagaaatttttcaa caaaagattcttttgtttatggatggtattttgatatttttatttagttC CTCTTCACTTCACTTCACATCACtatcctttttttcaaaatagccaAAAC ATGCTTGGATAGAAGCTGCCCTAAATACTCATATTGCTCCGATCTAACTG GTTGTCATTGTAACTTGGGTTTCCTATTGAACAAAACCACATCTTTGTGT GATCAGGTGAAAACTGGGTCAGGTATCTTGGTTCAGAATCTGCACCTCAA AGAAGACTTCAAAGAGGAATATTTGGATAAATCATCACAAGAATATATAC AATTCATTGCTCGTTTGGAATCAACATTACTTAAGTTCATGACAGTTGTC TACCCTTGGGTTGCACCATTATCTGTTAACGTAAAAGACCTACGACGTGG GAGTGTGGTTGTTGATTACGTGGTTACGTATGCGACGGATGACGAACTGA GTCTTGACGTAATGAAACGGGAGATCGAGTATGGCTTGTTACGTAACCAG TTAGAAGTATTTGAAACGACAAGAAAAACTGTACAAGTTTCAAGTAAGTA AATATCACCACTGATGCCACCAGAACCAGAAACTGTGTTCTTATTATAGG TGAAACATTCATATAACTATTTTTATCAAGAAGGTTCTTATCTTCCCTTA GAGTGCTCAATTAATTTATTAAAGTAGTTCAGAATACACCCCCTTcgcac agacccactgggaccctttcccactggaaaaattggccaggTAGAAAATT CGTATCCTTTAATTTTTGTccctactgaaaataatcaaacaaaccaatcc tcactgcaaaataatttactatttttcccatccccactgaattttctgac aaaagaattgaaatccccagccataaaacatatggaaatatcaatctcca tcgagTTTTTTTCTGTTATTGTTAtctccactggctgaaaaaatcctacc gggtctgtgagaagggggtgtcagaATGTTTCTGTAGGCTAAATACTATC TGATTATCCCTCTAAAGGAACTCTTTTAATCATTTGCCAGTACTGGTTTT TTAATCATCCATTTTTAGGCACTAATGGCTGCAATCTTGGCTTTCCAAAA TGTAATAGCATTACAGAGTCTTGTCAACCATTGGCAGGATTTGATTATGA TTGTGTTTGTAAAATGAACTTCACACGTTCATCTCACAATGGAAAATGTT CAAAGATTACTGGATCTCCTATTTGTAAGTTCTTTGAAATTCGcgatttt atgaaattttcacgaGTTTTAAACTCTGGTAGCATTGTAATACACCAATC ACTTTACTTGAGGCTTGTTAAGCActgtaaacattttcaaaagttgaaat tCACCTCATTTTCAATAACCCAATATTTTCCAAATCTCGTTATTTATGTT GCATAAATCAAATGagaatgaaaaatctcaataagGACTTTGTAAACTCA GGCCCTTTAAGTGGAtttcttttcggaaaaaaagttgattctactaacca tttttgaaacatcattactctttcaaaaaaaattatttttaaaatttttt ttcgacttcATGACGGGGAAAGATAGAATTTTAATATGGTTACAATGATA CCCATCAAGCCGGTGAaaaatttacatagaatttcaTTAATGTGGAGAAA GTcgctaaaaaatacataaaatggcGCCTCCGCGGGATACAGCGTTGAGC TTTTCACCTCAACTTTTGTACACGAGTAGTTCAAGCAGGTGGCTATTCGA AACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNGAATTACCAAAACTTCAGTATTTTCAC TTGAGTTCGAATTTCAAGCCGTATTTTAACCATATTGCACAATGAAACCC TCCACTACAGAGGTACTTTCAATATGGAGACTCTCCATCCTCCCTACTGc cttggaaaaagaaaatcacgaATTTCCAATTTTGTATCGCGCGGAATGTA GGGAAAACATAGTTTCTCCaagaaaattctcaaaaaatggaAGGTACAGG CCAATGGGTAAACCTGTTTGTTAAAAATGGTTGATTGACAAGTAGATNTA AACCTGTTTGTTAAAAATGGTTGATTGACAAGTAGATTCTTACGCAATAA GCcagtaatcaaatttaaaaggaaGACGCACTTCTTTCGTTCTTTTGAGC ATAAACCAATTAGCTAAttctcttatttttttcttaaaaaaatgtttaca agaaTAAGACTGCGTTTATTAAATATTGATTGATGCGTGAGGCCTTTTCA TTAAACATACAACTCTGTCGGTGTCTTTTTAGACTGTACCAGAGAGATCT TAGAAAAGAGGGAAAAGAGAGTTTTCGTTTCAGAACCACTTAAAGGGCCT GAGAAGAGGATAAGAAGATTTTGAAGGCGGATTTTTAGAAGCCTACATTG ATGTAATttccgagcagattctgatactccgCACATGAcacgtattcact ctaaaggccaTGGCTCCATAAGAGaatctgcaacaaaatcaactgtcaat catatccataaaaaataataaacattGAAACTCAGTTGCTTTCGCTCTCG TTTCCAAGCAAAAGTAACGCGATAttgttttggctgaacaaccaggtTAG ATCGTCACATTCGCCATATTCCTTCAGAATAGAGCATTGCatgcgcagaa tggatgatctgttatgaagTTAATATTGATCTCACCGTAACTAGTGATAA ATTGGGTCCGAAAAATTTATGAACATTTGAAAATGTATTAATTTCCCAAA TTAATAGATAAATTAAATTGCCACATGGTGTGTCCCTCGAGTTAAAGTAT CTTTGCGGATGGACACGTTTAGCTGTATCTTCAGCAATGAATGATTTATA TACGTTTTCTTTCTTTATAGTTTCCGATCATCAGATTAGTAACGGCAATT TTACTGTTATTGGTGCTGCATGCGCCTGTATCTTCGTCGTGCTTCTCTCC TTCCTAACAGCGTTCTTATTGGCTCAAAGAAAGCATCGAGCAGCTAAAAA ACAAGCTAATCCACCGGCACCGGGACCCTCGATTGATGCAAACTGGAGAC TATCACAAGATGGTAGACAAGCTACGAGGGAAAGTCACCTTAACTCCGCT TATCAatattgattatttttgaaagatattttttatatGGTAGCTTAATC GAAGTAAAAAGCATTAGAAAATAATAATACACTATCTTTGATTTTGCTTA CAAACTTGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008053XLOC_008053Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014384-exon-sc0000187-1491911889:306186..306376TCONS_00014384-exon-sc0000187-1491911889:306186..306376Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:306186..306376TCONS_00014384-exon-sc0000187-1510915933:306186..306376Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:306186..306376TCONS_00014384-exon-sc0000187-1575043694:306186..306376Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:306797..306943TCONS_00014384-exon-sc0000187-1491911889:306797..306943Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:306797..306943TCONS_00014384-exon-sc0000187-1510915933:306797..306943Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:306797..306943TCONS_00014384-exon-sc0000187-1575043694:306797..306943Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:307621..307746TCONS_00014384-exon-sc0000187-1491911889:307621..307746Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:307621..307746TCONS_00014384-exon-sc0000187-1510915933:307621..307746Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:307621..307746TCONS_00014384-exon-sc0000187-1575043694:307621..307746Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:312307..312432TCONS_00014384-exon-sc0000187-1491911889:312307..312432Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:312307..312432TCONS_00014384-exon-sc0000187-1510915933:312307..312432Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:312307..312432TCONS_00014384-exon-sc0000187-1575043694:312307..312432Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:313054..313182TCONS_00014384-exon-sc0000187-1491911889:313054..313182Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:313054..313182TCONS_00014384-exon-sc0000187-1510915933:313054..313182Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:313054..313182TCONS_00014384-exon-sc0000187-1575043694:313054..313182Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:313839..313961TCONS_00014384-exon-sc0000187-1491911889:313839..313961Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:313839..313961TCONS_00014384-exon-sc0000187-1510915933:313839..313961Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:313839..313961TCONS_00014384-exon-sc0000187-1575043694:313839..313961Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:314566..314691TCONS_00014384-exon-sc0000187-1491911889:314566..314691Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:314566..314691TCONS_00014384-exon-sc0000187-1510915933:314566..314691Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:314566..314691TCONS_00014384-exon-sc0000187-1575043694:314566..314691Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:315736..315858TCONS_00014384-exon-sc0000187-1491911889:315736..315858Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:315736..315858TCONS_00014384-exon-sc0000187-1510915933:315736..315858Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:315736..315858TCONS_00014384-exon-sc0000187-1575043694:315736..315858Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:316288..316410TCONS_00014384-exon-sc0000187-1491911889:316288..316410Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:316288..316410TCONS_00014384-exon-sc0000187-1510915933:316288..316410Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:316288..316410TCONS_00014384-exon-sc0000187-1575043694:316288..316410Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:316829..317278TCONS_00014384-exon-sc0000187-1491911889:316829..317278Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:316829..317278TCONS_00014384-exon-sc0000187-1510915933:316829..317278Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:316829..317278TCONS_00014384-exon-sc0000187-1575043694:316829..317278Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:317804..317959TCONS_00014384-exon-sc0000187-1491911889:317804..317959Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:317804..317959TCONS_00014384-exon-sc0000187-1510915933:317804..317959Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:317804..317959TCONS_00014384-exon-sc0000187-1575043694:317804..317959Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1491911889:319756..320096TCONS_00014384-exon-sc0000187-1491911889:319756..320096Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1510915933:319756..320096TCONS_00014384-exon-sc0000187-1510915933:319756..320096Clytia hemisphaericaexon
TCONS_00014384-exon-sc0000187-1575043694:319756..320096TCONS_00014384-exon-sc0000187-1575043694:319756..320096Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000187supercontigsc0000187:306186..320096 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 1.48869e-06 2.73698e-06 1.18785e-06 1.46539e-06 5.04638e-06 0 2.18027e-06 0 0 9.18286e-06 0.179602 0.301719 1.88088e-06 2.50648e-07 9.12421 4.28203 2.72931e-05 1.69628e-05 6.06946 5.13996 3.57409 3.65676 4.61457e-09 4.66064e-06 7.83093 13.3463 0 3.17498e-08
Blast
BLAST of TCONS_00014384 vs. Swiss-Prot (Human)
Match: FBN1 (Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 6.117e-44
Identity = 135/370 (36.49%), Postives = 179/370 (48.38%), Query Frame = 2
Query:  290 RCQCRDGF---FKGRKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQ--GNGTHCEDINECR-NAELQDCHTNAKCNNTIGAYQCTCLDGYHG--NGTYCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFT--GDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQG--DGISCQDKNEC-LTPFLNECPQDSSCGNTIGSFQCPCNAGFEQNNGL--CIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFIGNGTFCRAKTCLDRSCPKYSYCSDLT--------GCHCNLGFLLNKTTSLCDQV 1330
             C+C +G+   F   K C D++EC       C G   C N  G+Y+C C  G Q   N + C DINEC  +A L     N +C N IG YQC C  GYH   +  +C++ + C      C T  T    +   SYEC C  GF    D   C D +ECE   N+C     C N  G Y C+C +GF    D  +C D NEC L P  N C    +C NT GSF C C+ G+    G   C D+NEC+   H C ++A+C NT GS++C C  G+ GDG  C D+DEC      C   A C NT+GSY C C E + G+G  C   T LD      + C +           C C++GF+ +     C+ +
Sbjct: 1094 ECKCDEGYESGFMMMKNCMDIDECQRDPLL-CRGGV-CHNTEGSYRCECPPGHQLSPNISACIDINECELSAHL---CPNGRCVNLIGKYQCACNPGYHSTPDRLFCVDIDECSIMNGGCETFCT----NSEGSYECSCQPGFALMPDQRSCTDIDECEDNPNICD-GGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNP--NIC-LSGTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAHNCGKHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSQHADCKNTMGSYRCLCKEGYTGDGFTC---TDLDECSENLNLCGNGQCLNAPGGYRCECDMGFVPSADGKACEDI 1447          

HSP 2 Score: 152.525 bits (384), Expect = 8.066e-38
Identity = 113/277 (40.79%), Postives = 152/277 (54.87%), Query Frame = 2
Query:  383 NAKCINLFGTYQCTCKNGFQGNGTH--CEDINECRNAELQDCHTNAKCNNTIGAYQCTCLDGYHGNGT-YCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFT--GDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGF-QGDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGFE--QNNGLCIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENF 1189
            N  CIN+ G+++C C  GF  N     CEDI+EC+N  +  C  NA+C NT G+Y+C C  GY    T  C + N C+   + CS +  C+D     S+ C C+ GF    D + C D NECE   + C  N TC NTIGS++C CN+GF       C D +EC +   N C ++  C NT+GSFQC CN G+E   +   C+D+NEC  +  KC     CQN  GSYRC C  G+    + C D+DEC +    C +   C+NT GS+ C C E F
Sbjct: 1779 NGVCINMVGSFRCECPVGFFYNDKLLVCEDIDECQNGPV--CQRNAECINTAGSYRCDCKPGYRFTSTGQCNDRNECQEIPNICS-HGQCIDT--VGSFYCLCHTGFKTNDDQTMCLDINECER--DACG-NGTCRNTIGSFNCRCNHGFILSHNNDCIDVDECASGNGNLC-RNGQCINTVGSFQCQCNEGYEVAPDGRTCVDINECLLEPRKC-APGTCQNLDGSYRCICPPGYSLQNEKCEDIDECVEEPEIC-ALGTCSNTEGSFKCLCPEGF 2044          

HSP 3 Score: 138.658 bits (348), Expect = 1.814e-33
Identity = 107/280 (38.21%), Postives = 151/280 (53.93%), Query Frame = 2
Query:  290 RCQCRDGFFKGRK--VCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQGNGT-HCEDINECRNAELQDCHTNAKCNNTIGAYQCTCLDGYHGNG--TYCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFT-GDGSHCKDENECESKD-NLCHLNATCYNTIGSYHCVCNNGFQ--GDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGFEQNNGLCIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGF--YGDGKTCHDV 1096
            RC+C  GFF   K  VCED++EC +     C  NA+CIN  G+Y+C CK G++   T  C D NEC+  E+ +  ++ +C +T+G++ C C  G+  N   T C++ N CE  R  C  N TC +     S+ C CN GF     + C D +EC S + NLC  N  C NT+GS+ C CN G++   DG +C D NECL       P   +C N  GS++C C  G+   N  C D++EC  +   C     C NT GS++C C +GF     G+ C D+
Sbjct: 1790 RCECPVGFFYNDKLLVCEDIDECQNGPV--CQRNAECINTAGSYRCDCKPGYRFTSTGQCNDRNECQ--EIPNICSHGQCIDTVGSFYCLCHTGFKTNDDQTMCLDINECE--RDACG-NGTCRNT--IGSFNCRCNHGFILSHNNDCIDVDECASGNGNLCR-NGQCINTVGSFQCQCNEGYEVAPDGRTCVDINECLLEPRKCAP--GTCQNLDGSYRCICPPGYSLQNEKCEDIDECVEEPEICAL-GTCSNTEGSFKCLCPEGFSLSSSGRRCQDL 2056          

HSP 4 Score: 133.65 bits (335), Expect = 9.022e-32
Identity = 120/380 (31.58%), Postives = 175/380 (46.05%), Query Frame = 2
Query:  182 FEKAILTLATATNE---TEITCQTSCIHEYGETCLNDQSRCQCRDGFF--KGRKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQ--GNGTHCEDINECRNAELQDCHTNAKCNNTIGAYQCTCLDGYHG--NGTYCINTNT----CEYQRSKCSTNATCVDLSDSSSYECHCNQGFTGDGSHCK-------------------------DENECESKDNLCHLNATCYNTIGSYHCVCNNGFQGD--GISCQDKNECLTPFLNECPQDSS--CGNTIGSFQCPCNAGF--EQNNGLCIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENF 1189
            FE   +      NE     + C   C++ YG         C+C  G+   + R++C+D +EC     +      +C NL GTY C C  G+Q   +G  C D NEC+         N +C NT G+Y C C DG+    N   C++        E  ++ C   ++  + +  +  EC C+ G  G G HC+                         D +EC+   ++C  N  C N  GSYHC+C  G+  D  G SC D NEC     N+ P+  +  C NT GS+QC C  G+  +++   C DL+EC T++H C    LC NT G + C+C  GF     +C D +EC  +I+ C S+  C NT GS+TC C   F
Sbjct: 2196 FEPGPMMTCEDINECAQNPLLCAFRCVNTYG------SYECKCPVGYVLREDRRMCKDEDECEEGKHDCTEKQMECKNLIGTYMCICGPGYQRRPDGEGCVDENECQTK--PGICENGRCLNTRGSYTCECNDGFTASPNQDECLDNREGYCFTEVLQNMCQIGSS--NRNPVTKSECCCDGG-RGWGPHCEICPFQGTVAFKKLCPHGRGFMTNGADIDECKVIHDVCR-NGECVNDRGSYHCICKTGYTPDITGTSCVDLNEC-----NQAPKPCNFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNC--QFLCVNTIGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTPGSFTCECQRGF 2556          

HSP 5 Score: 129.413 bits (324), Expect = 1.510e-30
Identity = 117/324 (36.11%), Postives = 150/324 (46.30%), Query Frame = 2
Query:  332 CEDLNECAS-PSTNDCHGNAKCINLFGTYQCTCKNGFQG--NGTHCEDINE--CRNAELQD-CHTNAKCNNTIGAYQCTCLDGYHGNGTYCINTNTCEYQ-----RSKCS------TNATCVD--------------LSDSSSYECHCNQGFTGD--GSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGF--QGDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGFEQNNGLCIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGD--GKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFI 1192
            C D NEC + P   +   N +C+N  G+Y C C +GF    N   C D  E  C    LQ+ C   +   N +   +C C DG  G G +C     C +Q     +  C       TN   +D              ++D  SY C C  G+T D  G+ C D NEC      C  N  C NT GSY C C  G+  Q DG SC+D +EC T   N       C NTIG F C C  GF Q++  CID NEC +  + C    +CQNT GS+ C+C  GF  D  G +C DVDEC  N      Q  C N IG Y C+C + ++
Sbjct: 2289 CVDENECQTKPGICE---NGRCLNTRGSYTCECNDGFTASPNQDECLDNREGYCFTEVLQNMCQIGSSNRNPVTKSEC-CCDGGRGWGPHC---EICPFQGTVAFKKLCPHGRGFMTNGADIDECKVIHDVCRNGECVNDRGSYHCICKTGYTPDITGTSCVDLNECNQAPKPC--NFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHN---CQFLCVNTIGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTPGSFTCECQRGFSLDQTGSSCEDVDECEGNH---RCQHGCQNIIGGYRCSCPQGYL 2597          

HSP 6 Score: 129.028 bits (323), Expect = 2.273e-30
Identity = 109/300 (36.33%), Postives = 145/300 (48.33%), Query Frame = 2
Query:  338 DLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQGN--GTHCEDINECRNAELQDCHTNAKCNNTIGAYQCTCLDGY--HGNGTYCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFTGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQGD--GISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGFEQNNGL--CIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGD--GKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENF--IGNG 1201
            D++EC     +D   N +C+N  G+Y C CK G+  +  GT C D+NEC  A       N  C NT G+YQC+C  GY    +G  C + + C  ++  C     CV+      + C C  GFT   + C D NEC S  NLC     C NT GS+ C C  GF  D  G SC+D +EC      +      C N IG ++C C  G+ Q+     C+D NEC +  H C   A C NT GSY+C C  GF  +     C D++EC    + C     C+NT G Y C C   +  IG G
Sbjct: 2402 DIDECKV--IHDVCRNGECVNDRGSYHCICKTGYTPDITGTSCVDLNECNQAPKP---CNFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNCQ--FLCVNTI--GGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTPGSFTCECQRGFSLDQTGSSCEDVDECEGNHRCQ----HGCQNIIGGYRCSCPQGYLQHYQWNQCVDENECLS-AHICG-GASCHNTLGSYKCMCPAGFQYEQFSGGCQDINECGSAQAPC--SYGCSNTEGGYLCGCPPGYFRIGQG 2684          

HSP 7 Score: 122.865 bits (307), Expect = 1.908e-28
Identity = 128/398 (32.16%), Postives = 185/398 (46.48%), Query Frame = 2
Query:  290 RCQCRDGF-FKGRKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQG--NGTHCEDINEC-RNAELQDCHTNAKCNNTIGAYQCTCLDGYH--GNGTYCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGF--TGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQG--DGISCQD------------KNECLTPFLNECPQ-DSSCGNTIGSFQCPCNAGFEQNN----GLC----------IDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGD--GKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFIGNGTF--------CRAKTCLDRSCPKYSYCSDLTGCHCNLGFLLNKTTSLCDQVKTGS 1342
            RC+C  GF    R  C D++EC     N C G  +CIN  G+Y C C+ G+Q     T C DI+EC +N  + +   N +C NT G++ C C  G+H   +G  C + + C   R+ C  N  C++  +  S++C C  GF    DG +CKD NECE+   +C +N  C NT GSY C C  G     DG  C D            + +C+ P      + +  C +T  +F  PC     QN+     LC           D+NEC      C  N +C+N  G+Y+C C  G+  D  GK C D++EC  N   C +   C NT GS+ C C + FI             C +  C++  C K S  S +  C C+    L+ T ++C +   G+
Sbjct:  473 RCECNKGFQLDLRGECIDVDEC---EKNPCAG-GECINNQGSYTCQCRAGYQSTLTRTECRDIDECLQNGRICN---NGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSI-RNMC-LNGMCIN--EDGSFKCICKPGFQLASDGRYCKDINECETP-GIC-MNGRCVNTDGSYRCECFPGLAVGLDGRVCVDTHMRSTCYGGYKRGQCIKPLFGAVTKSECCCASTEYAFGEPCQPCPAQNSAEYQALCSSGPGMTSAGSDINECALDPDIC-PNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDN-GQCRNTPGSFVCTCPKGFIYKPDLKTCEDIDECESSPCINGVC-KNSPGSFI--CECSSESTLDPTKTICIETIKGT 852          

HSP 8 Score: 121.324 bits (303), Expect = 5.668e-28
Identity = 101/282 (35.82%), Postives = 142/282 (50.35%), Query Frame = 2
Query:  272 CLNDQS--RCQCRDGFFKG--RKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGF--QGNGTHCEDINECRNAELQDCHTNAKCNNTIGAYQCTCLDGYHGNGTYCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFTGD--GSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGF--QGDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGF--EQNNGLCIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYGDGK 1081
            C+ND+    C C+ G+        C DLNEC   +   C  N  C N  G+YQC+C  G+  Q +G  C+D++EC   +  +C     C NTIG + C C  G+  + T CI+ N C    + C +   C +     S+ C C +GF+ D  GS C+D +ECE      H    C N IG Y C C  G+        C D+NECL+  +      +SC NT+GS++C C AGF  EQ +G C D+NEC + +  C     C NT G Y C C  G++  G+
Sbjct: 2418 CVNDRGSYHCICKTGYTPDITGTSCVDLNECNQ-APKPC--NFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQ-HNCQ--FLCVNTIGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTP--GSFTCECQRGFSLDQTGSSCEDVDECEGNHRCQH---GCQNIIGGYRCSCPQGYLQHYQWNQCVDENECLSAHIC---GGASCHNTLGSYKCMCPAGFQYEQFSGGCQDINECGSAQAPCSYG--CSNTEGGYLCGCPPGYFRIGQ 2683          

HSP 9 Score: 115.931 bits (289), Expect = 2.723e-26
Identity = 103/334 (30.84%), Postives = 152/334 (45.51%), Query Frame = 2
Query:  293 CQCRDGFFKG--RKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGF-QGNGTHCEDINECRNAELQDCHTNAKCNNTIGAYQCTCLDGYH--GNGTYCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGFTGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQ--GDGISCQD-----------KNECLTP-FLNECPQDSSCGNTIGSFQCPC-------NAGFEQ----NNGLCIDLNECQTQKHKCDQNALCQ-----NTHGSYRCQCFDGFYGDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENF 1189
            C C  GF     + +C D+NEC      D  GN  C N  G++ C C +GF   +   C D++EC +     C  N +C NT+G++QC C +GY    +G  C++ N C  +  KC+   TC +L    SY C C  G++     C+D +EC  +  +C L  TC NT GS+ C+C  GF     G  CQD             +C +P   N   Q+  C      +  PC       +  F Q     +G+ +  ++      +C +  +C+     NT GSYRC+C  G+   G  C D DEC  ++ +      C N IG + C C E F
Sbjct: 1874 CLCHTGFKTNDDQTMCLDINECE----RDACGNGTCRNTIGSFNCRCNHGFILSHNNDCIDVDECASGNGNLCR-NGQCINTVGSFQCQCNEGYEVAPDGRTCVDINECLLEPRKCAP-GTCQNLD--GSYRCICPPGYSLQNEKCEDIDECVEEPEICAL-GTCSNTEGSFKCLCPEGFSLSSSGRRCQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPYGSGIIVGPDDSAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDEC--SVGNPCGNGTCKNVIGGFECTCEEGF 2196          

HSP 10 Score: 114.775 bits (286), Expect = 6.170e-26
Identity = 123/431 (28.54%), Postives = 179/431 (41.53%), Query Frame = 2
Query:  293 CQCRDGFF--KGRKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGFQGNGTHCEDINECRNAELQDCHTNAKCNNTIGAYQCTCLDGYHGNGTYCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGF--TGDGSHCKDENECESKD----NLCH-----------------------------------LNATCYNTIGSYHCVCNNGFQGDG--ISCQDKNECLTPFLNECPQ----DSSCGNTIG-------------------------------SFQCPCNAGFEQNNGLCI--DLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFY--GDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENFIG-NGTFCRAKTCLDRS---CPKYSYCSDLTGCHCNLGFLLNKTTSLC 1321
            C C  G+   KG+  C D+NEC   + N C  +A C N  G+++C+C  G+ G+G  C D++EC N     C  +A C NT+G+Y+C C +GY G+G  C + + C    + C  N  C  L+    Y C C+ GF  + DG  C+D +EC   +      CH                                   ++  C NT GSY C C   F+ +   + C D       +L+  P+    D++C N IG                                  CP   GF  N    I  D++ECQ     C Q   C NT GS++C+C  G+Y   D + C DV+EC            C NT+G+YTC C  +++  NG       C+D     C +  Y  + T   C+   L N T  +C
Sbjct: 1305 CHCDMGYSGKKGKTGCTDINECEIGAHN-CGKHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNG-THMCSQHADCKNTMGSYRCLCKEGYTGDGFTCTDLDECSENLNLCG-NGQC--LNAPGGYRCECDMGFVPSADGKACEDIDECSLPNICVFGTCHNLPGLFRCECEIGYELDRSGGNCTDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRS-GNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLC-QGGKCINTFGSFQCRCPTGYYLNEDTRVCDDVNECE--TPGICGPGTCYNTVGNYTCICPPDYMQVNG----GNNCMDMRRSLCYRNYYADNQT---CDGELLFNMTKKMC 1719          

HSP 11 Score: 105.145 bits (261), Expect = 5.349e-23
Identity = 103/340 (30.29%), Postives = 147/340 (43.24%), Query Frame = 2
Query:  275 LNDQSRCQCRDGFFKGRKVCEDLNECASPSTNDCHGNAKCINLFGTYQCTCKNGF--QGNGTHCEDINECR-NAELQDCHTNAKCNNTIGAYQCTCLDGYHGNGTYC--INTNTCEYQRSKCSTNATCVDLSDSS-----------------------SYECHCNQGFTGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQ-GDGISCQDKNECL-TPFLNECPQDSSCGNTIGSFQCPCNAGF--EQNNGLCIDLNECQTQKHKCDQNAL-CQNTHGSYRCQCFDGF--YGDGKTCHDVDECHQNISDCHSQAHCTNTIGSYTCACAENF 1189
            L+   RC C  G+    + CED++EC         G   C N  G+++C C  GF    +G  C+D+      A+ +    ++  +      +C C     G G  C    T   E  R  C   +  +   D S                       SY C C  G+   G+ C D +EC S  N C  N TC N IG + C C  GF+ G  ++C+D NEC   P L        C NT GS++C C  G+   ++  +C D +EC+  KH C +  + C+N  G+Y C C  G+    DG+ C D +EC      C +   C NT GSYTC C + F
Sbjct: 1992 LDGSYRCICPPGYSLQNEKCEDIDECVEEPEICALGT--CSNTEGSFKCLCPEGFSLSSSGRRCQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPYGSGIIVGPDDSAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDEC-SVGNPCG-NGTCKNVIGGFECTCEEGFEPGPMMTCEDINECAQNPLLCA----FRCVNTYGSYECKCPVGYVLREDRRMCKDEDECEEGKHDCTEKQMECKNLIGTYMCICGPGYQRRPDGEGCVDENECQTKPGICEN-GRCLNTRGSYTCECNDGF 2322          

HSP 12 Score: 92.4337 bits (228), Expect = 5.397e-19
Identity = 75/205 (36.59%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  509 NAKCNNTIGAYQCTCLDGYHGN-GTYCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGF--TGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQ--GDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGFE--QNNGLCIDLNECQTQKHKCDQNALCQNTHGSYRCQCFDGFYG--DGKTCHDV 1096
            N +C  T G+ +C C  G+  +    CI+ + CE  ++ C+       +++  SY C C  G+  T   + C+D +EC     +C+ N  C NT GS+HCVCN GF    DG +C+D +EC     N C  +  C N  GSF+C C  GF+   +   C D+NEC+T       N  C NT GSYRC+CF G     DG+ C D 
Sbjct:  462 NGRCIPTPGSCRCECNKGFQLDLRGECIDVDECE--KNPCAGGEC---INNQGSYTCQCRAGYQSTLTRTECRDIDECLQNGRICN-NGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDEC--SIRNMC-LNGMCINEDGSFKCICKPGFQLASDGRYCKDINECETPGIC--MNGRCVNTDGSYRCECFPGLAVGLDGRVCVDT 655          

HSP 13 Score: 87.4261 bits (215), Expect = 1.794e-17
Identity = 72/194 (37.11%), Postives = 98/194 (50.52%), Query Frame = 2
Query:  383 NAKCINLFGTYQCTCKNGFQGN-GTHCEDINECRNAELQDCHTNAKCNNTIGAYQCTCLDGYHG--NGTYCINTNTCEYQRSKCSTNATCVDLSDSSSYECHCNQGF--TGDGSHCKDENECESKDNLCHLNATCYNTIGSYHCVCNNGFQ--GDGISCQDKNECLTPFLNECPQDSSCGNTIGSFQCPCNAGF 943
            N +CI   G+ +C C  GFQ +    C D++EC   E   C    +C N  G+Y C C  GY      T C + + C  Q  +   N  C++     S+ C CN GF  T DG +C+D +EC  + N+C LN  C N  GS+ C+C  GFQ   DG  C+D NEC TP +     +  C NT GS++C C  G 
Sbjct:  462 NGRCIPTPGSCRCECNKGFQLDLRGECIDVDEC---EKNPC-AGGECINNQGSYTCQCRAGYQSTLTRTECRDIDEC-LQNGRICNNGRCINT--DGSFHCVCNAGFHVTRDGKNCEDMDECSIR-NMC-LNGMCINEDGSFKCICKPGFQLASDGRYCKDINECETPGIC---MNGRCVNTDGSYRCECFPGL 643          
The following BLAST results are available for this feature:
BLAST of TCONS_00014384 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBN16.117e-4436.49Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3[more]
back to top