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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014366 ID=TCONS_00014366|Name=TCONS_00014366|organism=Clytia hemisphaerica|type=transcript|length=2127bp
AAAACACGGAGCTGATGTTAACATCGAATCTAACCATAATGCTTTGCCAA
TTGATTTTGTTCGCGGTATAAATTCGAATGAAGTTATTGagttattgaaa
gaaaaaaaatcactgcAGCATTCCACCTCTTCTTTTCTTGACCCTGTAGA
AGTGCTTAACGAGGATAACACAATACCAGAAACCATTGACATTGAGGATA
TAGACGAGCATATTTTAAACAATGAAGATAGAAAAAATGTCATGACTTGC
ATagttaaaaactttttagaagGCCCCAAAATAGACGAAAATGTAGATTT
TCAATCGCTTTCCGAAAATATAAAAACGTTGCTGACTCGTATTGCTGATG
AAGTTCGGGAGACTCATCCTAAACTTTCATTTACACCTGTTTTGTCTGGC
AGTGTCAGCGAAGGTACAAAAGTCACTTATCCTGATGAATTTGATTATCT
GCTCTACCTAGATAACTTTCAAGGAACAGTTAGAATAATTGAAAACAGCT
GCCCATCAGGATTTTGCAGGGCTAAAGGATTATCCGATATCGACAAGGAG
CAGGGACGCTATTTCAACAATGAAGAGTATCTGGAGGCTTCAAAATTAAC
ACAAAATATATACACTATTATAAATCATATTGCGTCCAAGAATTCAATTT
GGGATGGTCTTGGAATATACCTTAAAGAAGGCCCAGATTGTAATTCATCG
ATTGCTTCGATGGAGATTTTATGGATTGGTCCTAAGTATCGATTCCTACC
CGTATCAATCGATCTTGTAATTGCCCTGGAAATAAAAGATTGGTTGCCGA
AATGTATGAGTGGTAAGAATTATAATAGCCCAGTCCTCAAAGATGCCGTA
AAAGAAGGCTGCCTTATTGTCGTCAAACCACCCAAAGATGACCTTGACTG
CAATGATTACTATGGAAAGAATGATATGTTTCGGATATCCTTTTCCAAAA
TCGAAACCAAGATCTTCAATATTTGCCCTCCAGGCTACAAATTAGGATAC
ATGTTAGCAAAGGCTCTTAGAGAATGGCTGCCATCTTTTTCTGCGGCTTG
GATAAAGCATCCAGATTATGAATCTCACACTAAGCCAAGTTTACCTTCCT
ACTATTTGAAGAATTATCTTTTCTTTGAAATGGAGAAAAACCCAGATGAT
GTTGATCCATCGCCAATAGAAGTCGCTTATAAGATATGGAAAGCTGTCGC
AACAGCGCTCAAAAAAGGCACAATAATGTCGTTCTTtaataaaaactgtt
ttgttcATGGTGATATAGAAAGTCAATTTagtaattttgattcttataat
GGTGTGTGGAATTATTctgatggagaattttcagaaaatgatgaTGTTGA
TGATGGGAAAGGCATGCTTTACACAAACGAAGATGGACGCATGCAGCAAA
TGATGAGTGCAATGATTGTTAAAATATTACGGAATGAGTTGAATATTGAA
GATTCTGAAGTTGATGAAGAAGATTTTGATTAGTCTTCTTTCATTCAGAA
AGATGAAATCGTTTGTTGTATATAGATATAAATGACTAAGTAAAGGCTTT
GTTTGAGACACGAGAATTTTTTTGTCGAtagtgcaatgcaacatgctcca
tcccacttcaacacaggaaaaaaagtgcgtgtctcatggttttttttgtt
tcattggacaaaaagtgaggaaaatacccaaaagacacgctgattttgtc
ccagggacaaaagagAGATTTcgcttttattggtagaaagaataATGGGG
GGAGATACGAGAAAACGTTTCAGGTtgatgggatggagcatgttgctctg
caccaacgcgaaaaaaacttctcatgTGGGGATGTTTCGTATCGTACTCA
AACCGTGTTTCAGCTAAAGACTTGCCATCTTTAAGTCACGTGCTATTTAA
TTATTTAATAATTTGTTTATGAAGGAGTTTCAGGTTTTTTGGGGGATTTT
TAGGATTTCTAAcggattttgggattttttcatatatttagTAACTTCTT
TGGGTTTTTGAGATTTCTTTGTGATTTATAAAATGAGATTTCTAAGACAT
TTTTAgggttttaaaatttcttcagTGTATTTCGAATTATTTTGGGTATA
ATATGTTTTTAATGTTTGAGTGAATCG Run BLAST on NCBI protein sequence of TCONS_00014366-protein >TCONS_00014366-protein ID=TCONS_00014366-protein|Name=TCONS_00014366-protein|organism=Clytia hemisphaerica|type=polypeptide|length=493bp
KHGADVNIESNHNALPIDFVRGINSNEVIELLKEKKSLQHSTSSFLDPVE
VLNEDNTIPETIDIEDIDEHILNNEDRKNVMTCIVKNFLEGPKIDENVDF
QSLSENIKTLLTRIADEVRETHPKLSFTPVLSGSVSEGTKVTYPDEFDYL
LYLDNFQGTVRIIENSCPSGFCRAKGLSDIDKEQGRYFNNEEYLEASKLT
QNIYTIINHIASKNSIWDGLGIYLKEGPDCNSSIASMEILWIGPKYRFLP
VSIDLVIALEIKDWLPKCMSGKNYNSPVLKDAVKEGCLIVVKPPKDDLDC
NDYYGKNDMFRISFSKIETKIFNICPPGYKLGYMLAKALREWLPSFSAAW
IKHPDYESHTKPSLPSYYLKNYLFFEMEKNPDDVDPSPIEVAYKIWKAVA
TALKKGTIMSFFNKNCFVHGDIESQFSNFDSYNGVWNYSDGEFSENDDVD
DGKGMLYTNEDGRMQQMMSAMIVKILRNELNIEDSEVDEEDFD Run BLAST on NCBI transcript from alignment at sc0000187:180551..183632+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014366 ID=TCONS_00014366|Name=TCONS_00014366|organism=Clytia hemisphaerica|type=transcript|length=3082bp|location=Sequence derived from alignment at sc0000187:180551..183632+ (Clytia hemisphaerica)
AAAACACGGAGCTGATGTTAACATCGAATCTAACCATAATGCTTTGCCAA
TTGATTTTGTTCGCGGTATAAATTCGAATGAAGTTATTGagttattgaaa
gaaaaaaaatcactgcAGCATTCCACCTCTTCTTTTCTTGACCCTGTAGA
AGTGCTTAACGAGGATAACACAATACCAGAAACCATTGACATTGAGGATA
TAGACGAGCATATTTTAAACAATGAAGATAGAAAAAATGTCATGACTTGC
ATagttaaaaactttttagaagGCCCCAAAATAGACGAAAATGTAGATTT
TCAATCGCTTTCCGAAAATATAAAAACGTTGCTGACTCGTATTGCTGATG
AAGTTCGGGAGACTCATCCTAAACTTTCATTTACACCTGTTTTGTCTGGC
AGTGTCAGCGAAGGTACAAAAGTCACTTATCCTGATGAATTTGATTATCT
GCTCTACCTAGATAACTTTCAAGGAACAGTTAGAATAATTGAAAACAGCT
GCCCATCAGGATTTTGCAGGGCTAAAGGATTATCCGATATCGACAAGGAG
CAGGGACGCTATTTCAACAATGAAGAGTATCTGGAGGCTTCAAAATTAAC
ACAAAATATATACACTATTATAAATCATATTGCGTCCAAGAATTCAATTT
GGGATGGTCTTGGAATATACCTTAAAGAAGGCCCAGATTGTAATTCATCG
ATTGCTTCGATGGAGATTTTATGGATTGGTCCTAAGTATCGATTCCTACC
CGTATCAATCGATCTTGTAATTGCCCTGGAAATAAAAGATTGGTTGCCGA
AATGTATGAGTGGTAAGAATTATAATAGCCCAGTCCTCAAAGATGCCGTA
AAAGAAGGCTGCCTTATTGTCGTCAAACCACCCAAAGATGACCTTGACTG
CAATGATTACTATGGAAAGAATGATATGTTTCGGATATCCTTTTCCAAAA
TCGAAACCAAGATCTTCAATATTTGCCCTCCAGGCTACAAATTAGGATAC
ATGTTAGCAAAGGCTCTTAGAGAATGGCTGCCATCTTTTTCTGCGGCTTG
GATAAAGCATCCAGATTATGAATCTCACACTAAGCCAAGTTTACCTTCCT
ACTATTTGAAGAATTATCTTTTCTTTGAAATGGAGAAAAACCCAGATGAT
GTTGATCCATCGCCAATAGAAGTCGCTTATAAGATATGGAAAGCTGTCGC
AACAGCGCTCAAAAAAGGTACAATAATGTCGTTCTTtaataaaaactgtt
ttgttcATGGTGATATAGAAAGTCAACttaataattttgattcttacaaT
GGTGTGTGGGATTATTctgatggagaattttcagaaaatgatgaTGTTGA
TGATGGGAAAGGCATGCTTTACACCGACGAAGAAGGACGCATGCAGCAAA
TGATGAGTGCAATGATTGTTAAGATATTACGGGATGAGCTGAATATTGAA
GATTCCGAAGTTGATGAAGAAGATTTTGATTAGTCTTCTTTCATTCAGAA
AGATGGAATCGTTTGTTGTATATAGATATAAATTACTaagtaaaggcttg
gggacacgagaagtttttttttcgtaCTGAAACCGTGTTTGAAACTAAAG
ACTTGCCTTCTTTAAGTCACGTGTTATTTAATTATGTATTTTGTTTATGA
AGGAGTTTCAGggtttttttgggatttttagGATTTCTAAcggattttgg
gattttttcatatatttagTAACTTCTTTGGGTTTTTGAGATTTCTTTGT
GATTTATAAAATGAGATTTCTAAGACATTTTTAgggttttaaaatttctt
cagTGTATTTCGAATTATTTTGGGTATAATATGTTTTTAATGTTTGAGTG
AATCGTTTTCATTGATTAGTggtatttaagaaaaaaaattattttaaaag
attttattttttataaaagaaatcttcTCACTATATTAATGCAAtatcat
ggcgttctaaatctagatGTTGTGCTATATTTTTTCCATGCCTGGGTATC
AAAGTAGTGTCAAATATACATACGTTTCATGCTTNTAAGCCAAGTTTACC
TTCCTACTATTTGAAGAATTATCTTTTCTTTGAAATGGAGAAAAACCCAG
ATGATGTTGATCCATCGCCAATAGAAGTTGCTTATAAGATATGGAAAGCT
GTCGCAACAGCGCTCAAAGAAGGCACAATAATGTCGTTCTTtaataaaaa
ctgttttgttcATGGTGATATAGAAAGTCAATTTagtaattttgattctt
ataatGGTGTGTGGAATTATTctgatggagaattttcagaaaatgatgaT
GTTGATGATGGGAAAGGCATGCTTTACACAAACGAAGATGGACGCATGCA
GCAAATGATGAGTGCAATGATTGTTAAAATATTACGGAATGAGTTGAATA
TTGAAGATTCTGAAGTTGATGAAGAAGATTTTGATTAGTCTTCTTTCATT
CAGAAAGATGAAATCGTTTGTTGTATATAGATATAAATGACTAAGTAAAG
GCTTTGTTTGAGACACGAGAATTTTTTTGTCGAtagtgcaatgcaacatg
ctccatcccacttcaacacaggaaaaaaagtgcgtgtctcatggtttttt
ttgtttcattggacaaaaagtgaggaaaatacccaaaagacacgctgatt
ttgtcccagggacaaaagagAGATTTcgcttttattggtagaaagaataA
TGGGGGGAGATACGAGAAAACGTTTCAGGTtgatgggatggagcatgttg
ctctgcaccaacgcgaaaaaaacttctcatgTGGGGATGTTTCGTATCGT
ACTCAAACCGTGTTTCAGCTAAAGACTTGCCATCTTTAAGTCACGTGCTA
TTTAATTATTTAATAATTTGTTTATGAAGGAGTTTCAGGTTTTTTGGGGG
ATTTTTAGGATTTCTAAcggattttgggattttttcatatatttagTAAC
TTCTTTGGGTTTTTGAGATTTCTTTGTGATTTATAAAATGAGATTTCTAA
GACATTTTTAgggttttaaaatttcttcagTGTATTTCGAATTATTTTGG
GTATAATATGTTTTTAATGTTTGAGTGAATCG Coding sequence (CDS) from alignment at sc0000187:180551..183632+ >TCONS_00014366 ID=TCONS_00014366|Name=TCONS_00014366|organism=Clytia hemisphaerica|type=CDS|length=2964bp|location=Sequence derived from alignment at sc0000187:180551..183632+ (Clytia hemisphaerica)
AAACACGGAGCTGATGTTAACATCGAATCTAACCATAATGCTTTGCCAAT
TGATTTTGTTCGCGGTATAAATTCGAATGAAGTTATTGagttattgaaag
aaaaaaaatcactgcAGCATTCCACCTCTTCTTTTCTTGACCCTGTAGAA
GTGCTTAACGAGGATAACACAATACCAGAAACCATTGACATTGAGGATAT
AGACGAGCATATTTTAAACAATGAAGATAGAAAAAATGTCATGACTTGCA
TagttaaaaactttttagaagGCCCCAAAATAGACGAAAATGTAGATTTT
CAATCGCTTTCCGAAAATATAAAAACGTTGCTGACTCGTATTGCTGATGA
AGTTCGGGAGACTCATCCTAAACTTTCATTTACACCTGTTTTGTCTGGCA
GTGTCAGCGAAGGTACAAAAGTCACTTATCCTGATGAATTTGATTATCTG
CTCTACCTAGATAACTTTCAAGGAACAGTTAGAATAATTGAAAACAGCTG
CCCATCAGGATTTTGCAGGGCTAAAGGATTATCCGATATCGACAAGGAGC
AGGGACGCTATTTCAACAATGAAGAGTATCTGGAGGCTTCAAAATTAACA
CAAAATATATACACTATTATAAATCATATTGCGTCCAAGAATTCAATTTG
GGATGGTCTTGGAATATACCTTAAAGAAGGCCCAGATTGTAATTCATCGA
TTGCTTCGATGGAGATTTTATGGATTGGTCCTAAGTATCGATTCCTACCC
GTATCAATCGATCTTGTAATTGCCCTGGAAATAAAAGATTGGTTGCCGAA
ATGTATGAGTGGTAAGAATTATAATAGCCCAGTCCTCAAAGATGCCGTAA
AAGAAGGCTGCCTTATTGTCGTCAAACCACCCAAAGATGACCTTGACTGC
AATGATTACTATGGAAAGAATGATATGTTTCGGATATCCTTTTCCAAAAT
CGAAACCAAGATCTTCAATATTTGCCCTCCAGGCTACAAATTAGGATACA
TGTTAGCAAAGGCTCTTAGAGAATGGCTGCCATCTTTTTCTGCGGCTTGG
ATAAAGCATCCAGATTATGAATCTCACACTAAGCCAAGTTTACCTTCCTA
CTATTTGAAGAATTATCTTTTCTTTGAAATGGAGAAAAACCCAGATGATG
TTGATCCATCGCCAATAGAAGTCGCTTATAAGATATGGAAAGCTGTCGCA
ACAGCGCTCAAAAAAGGCACAATAATGTCGTTCTTtaataaaaactgttt
tgttcATGGTGATATAGAAAGTCAATTTagtaattttgattcttataatG
GTGTGTGGAATTATTctgatggagaattttcagaaaatgatgaTGTTGAT
GATGGGAAAGGCATGCTTTACACAAACGAAGATGGACGCATGCAGCAAAT
GATGAGTGCAATGATTGTTAAAATATTACGGAATGAGTTGAATATTGAAG
ATTCTGAAGTTGATGAAGAAGATTTTGATTAGAAACACGGAGCTGATGTT
AACATCGAATCTAACCATAATGCTTTGCCAATTGATTTTGTTCGCGGTAT
AAATTCGAATGAAGTTATTGagttattgaaagaaaaaaaatcactgcAGC
ATTCCACCTCTTCTTTTCTTGACCCTGTAGAAGTGCTTAACGAGGATAAC
ACAATACCAGAAACCATTGACATTGAGGATATAGACGAGCATATTTTAAA
CAATGAAGATAGAAAAAATGTCATGACTTGCATagttaaaaactttttag
aagGCCCCAAAATAGACGAAAATGTAGATTTTCAATCGCTTTCCGAAAAT
ATAAAAACGTTGCTGACTCGTATTGCTGATGAAGTTCGGGAGACTCATCC
TAAACTTTCATTTACACCTGTTTTGTCTGGCAGTGTCAGCGAAGGTACAA
AAGTCACTTATCCTGATGAATTTGATTATCTGCTCTACCTAGATAACTTT
CAAGGAACAGTTAGAATAATTGAAAACAGCTGCCCATCAGGATTTTGCAG
GGCTAAAGGATTATCCGATATCGACAAGGAGCAGGGACGCTATTTCAACA
ATGAAGAGTATCTGGAGGCTTCAAAATTAACACAAAATATATACACTATT
ATAAATCATATTGCGTCCAAGAATTCAATTTGGGATGGTCTTGGAATATA
CCTTAAAGAAGGCCCAGATTGTAATTCATCGATTGCTTCGATGGAGATTT
TATGGATTGGTCCTAAGTATCGATTCCTACCCGTATCAATCGATCTTGTA
ATTGCCCTGGAAATAAAAGATTGGTTGCCGAAATGTATGAGTGGTAAGAA
TTATAATAGCCCAGTCCTCAAAGATGCCGTAAAAGAAGGCTGCCTTATTG
TCGTCAAACCACCCAAAGATGACCTTGACTGCAATGATTACTATGGAAAG
AATGATATGTTTCGGATATCCTTTTCCAAAATCGAAACCAAGATCTTCAA
TATTTGCCCTCCAGGCTACAAATTAGGATACATGTTAGCAAAGGCTCTTA
GAGAATGGCTGCCATCTTTTTCTGCGGCTTGGATAAAGCATCCAGATTAT
GAATCTCACACTAAGCCAAGTTTACCTTCCTACTATTTGAAGAATTATCT
TTTCTTTGAAATGGAGAAAAACCCAGATGATGTTGATCCATCGCCAATAG
AAGTCGCTTATAAGATATGGAAAGCTGTCGCAACAGCGCTCAAAAAAGGC
ACAATAATGTCGTTCTTtaataaaaactgttttgttcATGGTGATATAGA
AAGTCAATTTagtaattttgattcttataatGGTGTGTGGAATTATTctg
atggagaattttcagaaaatgatgaTGTTGATGATGGGAAAGGCATGCTT
TACACAAACGAAGATGGACGCATGCAGCAAATGATGAGTGCAATGATTGT
TAAAATATTACGGAATGAGTTGAATATTGAAGATTCTGAAGTTGATGAAG
AAGATTTTGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014366-exon-sc0000187-1491911889:180551..181767 | TCONS_00014366-exon-sc0000187-1491911889:180551..181767 | Clytia hemisphaerica | exon |
| TCONS_00014366-exon-sc0000187-1510915933:180551..181767 | TCONS_00014366-exon-sc0000187-1510915933:180551..181767 | Clytia hemisphaerica | exon |
| TCONS_00014366-exon-sc0000187-1575043694:180551..181767 | TCONS_00014366-exon-sc0000187-1575043694:180551..181767 | Clytia hemisphaerica | exon |
| TCONS_00014366-exon-sc0000187-1491911889:182723..183632 | TCONS_00014366-exon-sc0000187-1491911889:182723..183632 | Clytia hemisphaerica | exon |
| TCONS_00014366-exon-sc0000187-1510915933:182723..183632 | TCONS_00014366-exon-sc0000187-1510915933:182723..183632 | Clytia hemisphaerica | exon |
| TCONS_00014366-exon-sc0000187-1575043694:182723..183632 | TCONS_00014366-exon-sc0000187-1575043694:182723..183632 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000187 | supercontig | sc0000187:180551..183632 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR024810 | Mab-21_dom |
Blast
The following BLAST results are available for this feature:
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