TCONS_00014286 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014286
Unique NameTCONS_00014286
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length581

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014286 ID=TCONS_00014286|Name=TCONS_00014286|organism=Clytia hemisphaerica|type=transcript|length=581bp
atgattAGAATTGTATATCCTTGGCTGAATAGGGCTGAATACCTGGTGTG
TTATTTTTCCTATGATGTTGTGCAAGACCTTCTTCGCCAAACTATTGTTA
AAGAGTCTTATGGGACGATAACGCATTTGTTGGTGGGGGGGGGGACAAAT
GTTGCAGATAGCTACAAATAATCAATGCAAAGATGCAATTTCATATGTCA
TGCCATTGAAGAAATTTATTGTACACGAGGAAAACCTTGCATATGTAGTC
TTTGAATTTGCGtaagatttttcgaaaaaaaattaattttgtaaatattt
aaaACACGTCTTAATTTGGAAAATACCCTCTGTAGTATTTTTTTATGTAA
GTTTAAATCATATAGATATACTCGGAATACGTCAACTTTGGTTGTTCTAT
TTTAAAAATGTAGGTGTTTCGAGAGTGGACTTTGTAACGATTTTTTCAAA
TGTAACTGGAGAGTCTTATTTAAAGACGTTATTGAGGAATATCAGATCGA
AGACTGTTGCACCATGAAGATATTCAATGATTGGGATGTCATGGCAGCTC
GTCAAAAGCGGATATTACAGTCAAAATCAGG
Run BLAST on NCBI

transcript from alignment at sc0000185:202891..203471+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014286 ID=TCONS_00014286|Name=TCONS_00014286|organism=Clytia hemisphaerica|type=transcript|length=581bp|location=Sequence derived from alignment at sc0000185:202891..203471+ (Clytia hemisphaerica)
atgattAGAATTGTATATCCTTGGCTGAATAGGGCTGAATACCTGGTGTG
TTATTTTTCCTATGATGTTGTGCAAGACCTTCTTCGCCAAACTATTGTTA
AAGAGTCTTATGGGACGATAACGCATTTGTTGGTGGGGGGGGGGACAAAT
GTTGCAGATAGCTACAAATAATCAATGCAAAGATGCAATTTCATATGTCA
TGCCATTGAAGAAATTTATTGTACACGAGGAAAACCTTGCATATGTAGTC
TTTGAATTTGCGtaagatttttcgaaaaaaaattaattttgtaaatattt
aaaACACGTCTTAATTTGGAAAATACCCTCTGTAGTATTTTTTTATGTAA
GTTTAAATCATATAGATATACTCGGAATACGTCAACTTTGGTTGTTCTAT
TTTAAAAATGTAGGTGTTTCGAGAGTGGACTTTGTAACGATTTTTTCAAA
TGTAACTGGAGAGTCTTATTTAAAGACGTTATTGAGGAATATCAGATCGA
AGACTGTTGCACCATGAAGATATTCAATGATTGGGATGTCATGGCAGCTC
GTCAAAAGCGGATATTACAGTCAAAATCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007990XLOC_007990Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014286-exon-sc0000185-1491911889:202891..203471TCONS_00014286-exon-sc0000185-1491911889:202891..203471Clytia hemisphaericaexon
TCONS_00014286-exon-sc0000185-1510915933:202891..203471TCONS_00014286-exon-sc0000185-1510915933:202891..203471Clytia hemisphaericaexon
TCONS_00014286-exon-sc0000185-1575043694:202891..203471TCONS_00014286-exon-sc0000185-1575043694:202891..203471Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:202891..203471 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.105645	0.170986	0.126128	0	0.140042	0.0882096	0.117524	1.54597	0.218117	0.236172	0.692199	0.358626	0.311926	0.466091	0.364419	0	0.51585	0.400408	0.143214	0.546748	0.157571	0.154221	0.275714	0.392315	0.418689	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014286 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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