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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014262 ID=TCONS_00014262|Name=TCONS_00014262|organism=Clytia hemisphaerica|type=transcript|length=732bp
TCAAACACTAACCACACTGTGGATGTAAAGGGTATAAAATTTCTGACAGT
CAAATACGGTATCCATAACAACACATACGATGAAGTGAGAAAAAGACAAA
TCTTAAAAGCGCGATTTTGTCTCCTTCGCCAACTTTTTCGGATctcaatt
tgagtaattttaTCTGGGTGTACTACAAATCGAGAGATTCTGCGATTCTG
TTTTGATACAATTCTGTAAAGTAATACATTGACCATAACAATGATAAACC
CTACGATGATGGATAAAAACCATGCTATTACGTCATCGTAAAAACTGACA
CCAAATGCTATCAACGTCACTAAAAAGGGTGTGACCAAATAAATCTTGCG
GTAAACGTGTTTCTTGATTTCGAACTCCAACGGAAAACGTACGGTCACAT
AACGTTCGACCGTTATCATGAGAATATACCCAATTTCAAGTCCGGATAAA
AAATACTGCCCATATCCAAACACGGAAGCTGAAATGTTAAAGTAGCCAAA
TTCAAACATTAAGATTTCGTAAATAAATCTTGTCAAACCTTGAAGCGAAT
GTGTTACAAATAATATGAAAACGAGTTCTTTGTTTAAACATCTTTTTCTG
GTTGTATTCTGAGGTTGGCTGATGGTCATAATTCGAACAGCAAAAATACT
GACcaccaaaatcaaaaatgattgtATGGACACCAAGACTAAATGTACAA
CGCTTGTCATGATCATTGAAAATGCTAAAAAG Run BLAST on NCBI protein sequence of TCONS_00014262-protein >TCONS_00014262-protein ID=TCONS_00014262-protein|Name=TCONS_00014262-protein|organism=Clytia hemisphaerica|type=polypeptide|length=243bp
FLAFSMIMTSVVHLVLVSIQSFLILVVSIFAVRIMTISQPQNTTRKRCLN
KELVFILFVTHSLQGLTRFIYEILMFEFGYFNISASVFGYGQYFLSGLEI
GYILMITVERYVTVRFPLEFEIKKHVYRKIYLVTPFLVTLIAFGVSFYDD
VIAWFLSIIVGFIIVMVNVLLYRIVSKQNRRISRFVVHPDKITQIEIRKS
WRRRQNRAFKICLFLTSSYVLLWIPYLTVRNFIPFTSTVWLVF Run BLAST on NCBI transcript from alignment at sc0000183:229538..230269 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014262 ID=TCONS_00014262|Name=TCONS_00014262|organism=Clytia hemisphaerica|type=transcript|length=732bp|location=Sequence derived from alignment at sc0000183:229538..230269 (Clytia hemisphaerica)
CTTTTTAGCATTTTCAATGATCATGACAAGCGTTGTACATTTAGTCTTGG
TGTCCATacaatcatttttgattttggtgGTCAGTATTTTTGCTGTTCGA
ATTATGACCATCAGCCAACCTCAGAATACAACCAGAAAAAGATGTTTAAA
CAAAGAACTCGTTTTCATATTATTTGTAACACATTCGCTTCAAGGTTTGA
CAAGATTTATTTACGAAATCTTAATGTTTGAATTTGGCTACTTTAACATT
TCAGCTTCCGTGTTTGGATATGGGCAGTATTTTTTATCCGGACTTGAAAT
TGGGTATATTCTCATGATAACGGTCGAACGTTATGTGACCGTACGTTTTC
CGTTGGAGTTCGAAATCAAGAAACACGTTTACCGCAAGATTTATTTGGTC
ACACCCTTTTTAGTGACGTTGATAGCATTTGGTGTCAGTTTTTACGATGA
CGTAATAGCATGGTTTTTATCCATCATCGTAGGGTTTATCATTGTTATGG
TCAATGTATTACTTTACAGAATTGTATCAAAACAGAATCGCAGAATCTCT
CGATTTGTAGTACACCCAGAtaaaattactcaaattgagATCCGAAAAAG
TTGGCGAAGGAGACAAAATCGCGCTTTTAAGATTTGTCTTTTTCTCACTT
CATCGTATGTGTTGTTATGGATACCGTATTTGACTGTCAGAAATTTTATA
CCCTTTACATCCACAGTGTGGTTAGTGTTTGA Coding sequence (CDS) from alignment at sc0000183:229538..230269 >TCONS_00014262 ID=TCONS_00014262|Name=TCONS_00014262|organism=Clytia hemisphaerica|type=CDS|length=729bp|location=Sequence derived from alignment at sc0000183:229538..230269 (Clytia hemisphaerica)
TTTTTAGCATTTTCAATGATCATGACAAGCGTTGTACATTTAGTCTTGGT
GTCCATacaatcatttttgattttggtgGTCAGTATTTTTGCTGTTCGAA
TTATGACCATCAGCCAACCTCAGAATACAACCAGAAAAAGATGTTTAAAC
AAAGAACTCGTTTTCATATTATTTGTAACACATTCGCTTCAAGGTTTGAC
AAGATTTATTTACGAAATCTTAATGTTTGAATTTGGCTACTTTAACATTT
CAGCTTCCGTGTTTGGATATGGGCAGTATTTTTTATCCGGACTTGAAATT
GGGTATATTCTCATGATAACGGTCGAACGTTATGTGACCGTACGTTTTCC
GTTGGAGTTCGAAATCAAGAAACACGTTTACCGCAAGATTTATTTGGTCA
CACCCTTTTTAGTGACGTTGATAGCATTTGGTGTCAGTTTTTACGATGAC
GTAATAGCATGGTTTTTATCCATCATCGTAGGGTTTATCATTGTTATGGT
CAATGTATTACTTTACAGAATTGTATCAAAACAGAATCGCAGAATCTCTC
GATTTGTAGTACACCCAGAtaaaattactcaaattgagATCCGAAAAAGT
TGGCGAAGGAGACAAAATCGCGCTTTTAAGATTTGTCTTTTTCTCACTTC
ATCGTATGTGTTGTTATGGATACCGTATTTGACTGTCAGAAATTTTATAC
CCTTTACATCCACAGTGTGGTTAGTGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014262-exon-sc0000183-1491911889:229538..230269 | TCONS_00014262-exon-sc0000183-1491911889:229538..230269 | Clytia hemisphaerica | exon |
| TCONS_00014262-exon-sc0000183-1510915933:229538..230269 | TCONS_00014262-exon-sc0000183-1510915933:229538..230269 | Clytia hemisphaerica | exon |
| TCONS_00014262-exon-sc0000183-1575043694:229538..230269 | TCONS_00014262-exon-sc0000183-1575043694:229538..230269 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:229538..230269 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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