TCONS_00014235 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014235
Unique NameTCONS_00014235
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length821

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014235 ID=TCONS_00014235|Name=TCONS_00014235|organism=Clytia hemisphaerica|type=transcript|length=821bp
gtaatgtttttctaaaaatgccttccaacgAGCAATAAATCAAGCAGCTC
ATCAAAATGAGTGGAGAAAAAAAGCAAGTAGCTCAGCCACCATCAGCATT
TAAGAATTTTGTAGCTGGAGGTGTGGGAGGAACATGCCTGGTTTTAACTG
GTCAACCCCTTGACACTATTAAGGTTAGACTTCAAACACAGAATGTGAAA
CCAGGTGAAACACCTTTTTACACTGGGACATTGGATTGTGCTAAAAAGAC
CATTCAGAAAGAGGGTTTCAGAGGTTTGTACAAAGGTATAATGACACCAT
TGGTTGGCGTGACACCCATCTACGCCTTATGTTTTTTGGGTTTTGGCGTT
GGGAAGAAATTACAAACTAAAGATCCAAACGAGGAGTTAACTCTTTTGCA
GATTGGAAATGCTGGTCTTTTGGCTGGTGTTTTCACGACTGTTATTATGG
CACCTGGTGAACGTATCAAATGTTTATTACAACTTCAAACAGGAGATCCA
AAGAATGCCAAATACAAGGGAGCATTGGATTGTGCCAAACAATTATACAA
AGAAGAAGGACTTTTCCGTGGTGTCTACAGAGGAACTGCTGCTACTTTAC
TCAGAGATGTCCCTGCCAGTGCAGCTTACTTCGCCGGATACGAAATGCTG
TTGAGAAGTCTCACACCTGAAGGAAAATCACGTGCTGATATGAGCCCATT
GAGGATCCTAGTGGCAGGCGGTTCGGCTGGTATCTTGAATTGGATCGTTG
CTATTGGTCCCGATACATTAAAATCTCGATTCCAAACAGCTCCTGCTGGT
ACGTACACTGGAGTTCGAGAN
Run BLAST on NCBI

transcript from alignment at sc0000183:155736..168441-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014235 ID=TCONS_00014235|Name=TCONS_00014235|organism=Clytia hemisphaerica|type=transcript|length=12706bp|location=Sequence derived from alignment at sc0000183:155736..168441- (Clytia hemisphaerica)
GTAATGTTTTTCTAAAAATGCCTTCCAACGGTATGTAACATGACATACTT
TAGAGAAAAAAAAATCATTTTAGCCATGGAACCTGTTCTGGTCTGTAAAA
TACACAAACAGGGGCCAATTTTTTGGGTCTGAGATTATATCCATTTTTGA
CCCCTAAACTACAATTGTGCAAAGTCTCATGCTTGTACGCCTTTGTGCAC
AATGTTAATGACTTTTGGCACATTTAGACTGCACTATCTGTCTTATTTTT
TTCAATTCCATCTCTAAAGAAGGGATTCAAAGAGGGTTGTCAACATTAGA
CCATCTCGCATTAAATTTAATGATAATGTAGGTACATATGTCCATTATTG
TTTTGAGATGACACGTCAGTGTTGGTGTACCTCTTTGTTTAGAGCAATAA
ATCAAGCAGCTCATCAAAATGAGTGGAGAAAAAAAGCAAGTAGCTCAGCC
ACCATCNCTCTCTGTTTAGAGCAATAAATCAAGCAGCTCATCAAAATGAG
TGGAGAAAAAAAGCAAGTAGCTCAGCCACCATCAGCATTTAAGAATTTTG
TAGCTGGAGGTGTGGGAGGAACATGCCTGGTTTTAACTGGTCAACCCCTT
GACACTATTAAGGTGAGTGATACCATTTTTGTTATATCTTTTACAAAGGG
AGAAGTTTCATCATGTTCACTTGAACTGTTACTTTTTTACTGAGATAAAC
ACATAGTAAGAATAATTTGTATGTTAAAGAAGCAATAATTTCAGCATTTC
AAAAACTATTTAATAAACAGCAATTATTACCTTCTTTTGCTTTACAAGTA
TAGTTCCACGCTTTCTGGACAAACTGTTGGTTATAATCACTATTACACAG
TTCCTGAGTGTTTACAACTTTAGAATTCTTATTTAAACCCGTGCTATAAC
GTTTTTATTAGATGAAACTGATTGTATTTTCCAGGTTAGACTTCAAACAC
AGAATGTGAAACCAGGTGAAACACCTTTTTACACTGGGACATTGGATTGT
GCTAAAAAGACCATTCAGAAAGAGGTAAACAAGTCACTCCACATAGATTG
CAAAAAATCAAAGCCTGTTTTTTTTCAAGCTGGTAAAGCTGGGGAAAACA
ATTACATGAGGCTTATAGAGGAAAAAAGAAATTATGATGATGAAAAACTG
ATTTGTGCCTAAAAAACAAAGACTTTTTGTCACGGAACATTATCTCTTGT
CATAATCATTGCTTCCTCCAAGATATTTTTTTTAATTTTCAAAATTGTCA
TTTGATTTCAAGGGTTTCAGAGGTTTGTACAAAGGTATAATGACACCATT
GGTTGGCGTGACACCCATCTACGCCTTATGTTTTTTGGGTTTTGGCGTTG
GGAAGAAATTACAAACTAAAGATCCAAACGAGGAGTTAACGTAAGTGGAA
GTCGATATCAATATTTATTTTTTATGATGTCTATTTTTATAGATATTCCA
ATATTGGGAATAAATTGGATCAAAATATAGATACTAAATAGTGTAACCCA
TTAAAGGTGTTTTTGAGTAACACAAAATCTTTTAATAATTTTAGTAAGAT
TTCTACTTATTCTCTCTAAATGTTTAAAAAAAAAGGTTCATTATTCCAGG
CCACATTAGTTAAACACTTTAAATCAAACTGTTGGAACTTGATCGAAGTG
TGTCTGAAGTTTTATAAAAGTGCAACTAAAAGTGTTACGTTAAGTTGGAA
AAAGCTTCAAGTTTGATTTATATTTACCGAACTCAATTGAACTCAATTGA
ACTTTTATCGTTCGATTTAGTTCAACATAATACAATCAAAAATTCAGGTC
TGATTAATGTGGCCTGGGTTATTGGTATATTAAGTTATTATTTATCTTTT
CAGTCTTTTGCAGATTGGAAATGCTGGTCTTTTGGCTGGTGTTTTCACGA
CTGTTATTATGGCACCTGGTGAACGTATCAAATGTTTATTACAAGTAAGT
GGGTTTTTATATTTGGTAGTCTTTTGGAAAGTAGTCATAACTGATATATG
AAATACCATACTCAGAGCAGCTGAAAAAAGGAATTTTAGCGTCTGGTGGC
TCCTTGAAACTGAATAAAACCTTGAACAGATTTAGGACAGTCCAAGGTCC
AATTTGAGCTTTACTTAAATTACTTTTAAAACTTTTATCTAGTAATTCCA
AACGTATGAGCATTCAAAGTTAGATAAAATCAAAAAAGACATTTTCATAT
TAGTTTCAACATATGTTCTTTTGGATTTTTCTCAATCATAGCCAAATTTT
ATACAAATAAGTTTTACAGTAATCAATAGTGCCTTTTTAAGGGAGTAAAG
AGACTTTTAGATTGTTTTCATAATACACACTGAAACCTATGTTGATGGTT
GATTGGTTGGAAAAGATTAGAAGGGATAGCGGGAGCTCTTCTAGCTAATG
AAAATTATTTAAAACGATGTTTTAAGATATTTGTAAAATTAGGTATGGGA
TAACATTAGTAACATTTGAAAGAGGCTGTGAAAAGGTAGAGATTGTAACT
AAAAGTTAACTTCTGGTTGTTCTGGTTGTTCACAAAATAGAACATTGAAG
GTTTTAAAGAGTGTGGGTTAATAAAGGGCTATTACCCATTGTACTGTTTT
TAAGAGTTAAAACTTTTCTTTGAGTTAATTCTAGCATAATTTATGTCAAC
GCACAGAAAGGTCCTAGAGTATGAAAATTAAATTCCTTAATTTGAATTAA
AATGTCCTTTTAATGATTGTACGTGTTTTTCAGAGCGTTGTGAATGTTTT
GTGTTTATTTACCTGTTAACTTGGATAATGAATTAAATGAAGAAAAATGG
TCATTATTGCAGTCATATAACTAATGTGTCCTCTTGCATCCAAGTCTTAG
TCCATCTCTTTGTTTCAATCGTAGTTTAACAAGCAATATCGTTTATTTTT
TAGACCTGCCTCGGAGGTTATTTAATTTAACCTTTGTTCGTCCGTTCATT
CGTCATTCGTCTGTTACCAGCTTTACTCGGGATCGGCCCATTAATTTTTT
GTATAGAGATGCAAAATGACAATACCCAAAAAGTGACAGAGCCTGATTTT
TGAAAATTTTTTTGATTTTTTGGGCAAATTTGGGCCAGAAACTGCCTAAA
AATGGGTTTTTTTTGGACTTTTTTCAGATTTTTTGCATAAAGAGATAATG
GGCAAGGTTATCTAAAAAGTGGCTTAAGCCGTTTTGCCCGGAAAGTTTTC
TTTGGTCTTAAAAATTGTATTTTCTTATTTGGGGAAATTCCCTTTTGTCA
TTCTTAGGGAAAATGAGCATTTCTCGCGATTACCTTTGTATTTTTTTTTA
ATTTTTTGCAAAATGATGTAAAATGATATTGTTTGAAATCTGAGGGAGCC
CGATATTTGAAAAAATAATTTCAATGGGGCAAATTTGAGCCAAAAAGTGC
CTAAAAAGTGTTTTTTTGGACTTTGAAATTACTTCATTTCGTTTTTTTCT
CATTTTTTGCATAAAGTAAAGGGCAAGGTTCTCTAAACAGTGGCTGAAGC
TGTTTTTTTCTGAAAAATTTCTTTTGGCCGTAAAAATCGAATTCTCATTT
TGGGAAAGTTCCATTGTGTCATTTTTAGGGAAAATGATCATTTCTATCGA
TTGACTTTTTTGTGTAAAATTCCTTCTTTAGTTTTTCCTGATACACAGTG
ATGCGAGATTGTAATCCTTAAAGGGACACAAAAGTAGTAAAATGTAAACA
TTGCGCAAACCACGTGTCATTAAAGAGAACAATTAAAATCACGTGTCCAA
AACAAACTTGTAAAACAATTGAAACAATCAAAGTCAGACATATTTGTTTT
TATTTTTCATTTTGACATGTGACATTTGTTTTGATTTTGTTTCCCGCTGC
ATACGGTTTGTTTACAAATTTCGTCAGTACTTTTATGTTCCTTTAAGATG
TAAGACTTCAAGATTAAAACAAAAAAAGTTTAAGCCAAATTTGGGCCGAA
TTTTGGACTTGTGGATATTGCTTCATTAGATTTTATCTTTTAAGAACATG
AAACAAAGGATTTTTGTTTGTGCCCAAAACTTAGCAAGGCTCCTTACCTC
TAAAACATCGAAAAGCCAGTGTGAAACAAGCTTCGTCGTGTTTTTCAAGC
TTACATACCTCTATGAACATAGCATAGAGATACGTAAGCTTGAAAAACAT
GACGTTATCTTTTCTCTTTCGTTTGAACATTTTCATCTTCATTCAACATG
TTTCCGACTACTTTGACGGAAATTTTTTGGCGAATTTAGCCAAAATCTGC
CAAATTAAGTTCCAGCCAAAATTTATTTTTTCCTCCATCCGCCAAAAATT
AAATTTCCACCAAATTTATTTTATTTAACGCATTCCCCAAATTGGTGCTA
TTTCAGGTCTTAAAACAGGTTTTTTTGCTTATATAATAACGATTTTGGCC
AAAAATATCCTGCAACCGCCAAATCAAATTCCCTTCAAATTTGATTTTTC
CAGCCATCTGCCAAATTAAATTCCCGCAAAAATGTCTTCCTTTTAAGGTA
TCTATCTCAGATAGGTCCATTCAGCATGTTGCTTGGTTCATTTGTAAAAA
CGCTAGTACTGGAAAAAGGAAAGAGCTCTACAGACTCTACAATACGTTCT
TTGAGCCATTTTAACATTCTGGTTTGTAAAATACCAATCAAACAGGTGAC
CGACCTGAAATTTTACAAAATATTTTCATTTATCAATATCTATCTCAAAA
TTTGATAGATCCTGAAAAACTAGGGAAGAAGCTTCTATTATGCTCCGCAT
ACAAAATTTGGAAGATGCTTGAAAGAAAACGTATCAGACTTTTCATAAAC
AAATAAAAATGAGCACAATGATGTGTAATTTTAAATATTTTATTCAATAT
TATAATAATATGATACGGAATACAAGAAAAAAAACTGGTATTAGAAAAAC
ATGAAAAAACTGAAAAAAACTCCTCGAATATTCCCTTAAAAAGGTGGAAA
ATACTGCAAATAAAAGTCCAAAAATAAACAAAAAGATAAAAAAAATTGTA
AAAATTATAATAAAAATGGTGCGTTCACTCGATGCGTGACTCAATGGCAA
GTTCTGGATTTTCAGTTCAGGCTTGGCGAGCTCTGGCTTTAGCTCGGTTG
CGGAATAATCGACGTTTTGCTGTCTTCGTAAGTTTCTTGGGAATTATTTG
GTCCGTAACGTTATTCGAAAGTGATTTCTCGTACAGATCTGAGCTGTCTT
CATTACTGTTCTGCTTCAAGTGGCAATCACTAGGTACTATGTGTGTTTTC
TCTTCTGTGAAAGAATTCTCATAAGTACAGTCAACGTTGTTGCCGTACAT
TGGTGCGAAGACATCGCCTTTGTTTGAAGTTTTAGAAGCACCATGAGATA
CGCTGTTGTTGTGATTACCATACAAAAATGCACAGGCGCCGACTTCGTTT
GAAGTTTGAACTAAACGATTCCATACGCTCTGGTTGTTATTGCCATACAT
AAAATCGAAAGCATCGACTTTGATTTGAGGAGCACCTTGCCGTACGTACG
TTTCTGGTTTACGGATAGCATCCATGGCCCGCTGGGTGCTGACCCGCAAC
TCAGCTTCACGCGCGTAATAAGCATGACGGACTTTATCTTCGAGTGTCAT
TCGATCTTTTTGTTGTTGGTTTCTTGAGGCGCTTCGTTGCCAACCAATGG
GTTTCACAGATTCGTTTTTTCGACTACCAATTGCGTCCATTTTGAATGAT
TCAGAGATCTTAGTTTTACTTTAATTGACTTTTGAAACCTTTTATTGAAT
AATTAAATAACTTCTTTGTCATTCACTGCTTTATCAAACAATGCATTAAT
GAAAACTACTTTCGAAATTTTCTTTATCCCAATTTTCAATCATACTTGAT
ATTTGACGTCAATTTGAATTTGAAACTTGAATGTTTTGCTAAATCATAGA
TTGACACCTTCTGACAAAATCTTTTCATTTCAGTTGACTGCATTGCCATC
TATCTGATGACGACATCAAAATCTGTCTGCCACTTCCAAAAATAAAACGC
TCCCATATAGTTTTGCTCAAATTTTGTGTAGACGCTCCCGTTGACATATG
AATAAGGGCGTAGGGCCACCATCCAAGTATATGTGTATTTTACAGGAAGT
CTTATATACTTTCTTCAATTCGAATCGCTCTGTAATTCGAACAAATAAGA
TTCCCACGCTGAGTTCGAATAAGTGAGAGTAAACTTTATATGATTATATT
AATTATGGAAGAAACTTATAGAGCCGTTTTTAACCATGCTTTTCTAATTT
GCTATTATAATGGGAAGTTGAAATTTTGCGATTTATGGTCAAATTCTAAC
TTAAAGTATCATAAATGCAGCAAATAGAATTAGTGTACGTCGACCGACGT
CAATCTTGGAGTTAATCTAATTGACGTCAAATATATTTTTGTGATTAGCG
AGTTATTTAGTTAAAAGTAGAAAAATAATTTGAAGAAAGAATTTCGCTTT
TTAAACTTCGACAAAGCAGTGAGTGAAAAAGCCAGTCCTTCAATTTTTTA
ATTGAAGTCAGAGAAATTTATCAAAGTAAAAATAAGTTTCCTATCTCAGC
TTCATTCGAAATGGACGCAATTGANGTTTCAAAAGTCAATTAAAGTAAAA
CTAAGATCTCTGAATCATTCGAAATGGACGCAATTGATAGTCGAAAAAAC
GAATCTGTGAAACCCATTGGTTGGCAACGAAGCGCCTCAAGAAACCAACA
ACAAAAAGATCGAATGACACTCGAAGATAAAGTCCGTCATGCTTATTACG
CGCGTGAAGCTGAGTTGCGGGTCAGCACCCAGCGGGCCATGGATGCTATC
CGTAAACCAGAAACGTACGTACGGCAAGGTGCTCCTCAAATCAAAGTCGA
TGCTTTCGATTTTATGTATGGCAATAACAACCAGAGCGTATGGAATCGTT
TAGTTCAAACTTCAAACGAAGTTGACGCCTGTGCTTTTGTGTATGGTAAT
CACAATGAGTGCTTACGACATTATGCTTCTAAAACTTCAAACAAAGGCGA
TGTCTTCGCACCAATGCACGGCAACAACGTTGACTGTACTTATGAGAATT
CTTTCACAGAAGAGAAAACACGCAAAGTACCTAGTGATTATCACTTGAAG
CAGAACAGTAATGAAGATAGCTCAGATCTGTACGAGAAATCACTTTCGAA
TAACCTTTGGGAACAAATAATTCCCAAGAAACTTACGAAGACAGCAAAAC
GTCGATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAAGCCATTGAGTCACGCATCGAGTGAACGCACTTTTTACAA
TCAATTTTTTCACTTTTTTTCGATTTTTTTTCATTTTTGGATTTTTATTT
ATAGTCTTTTTCCATCAGTTTCAGGGTATTTTTGATTTTTTTTTCTCAGT
TTTTTCTTGTTTTTCTAATACCGGTTTTTTTTCTTGTATTCCGTATCATA
TTGAATAAAATCATTCAAAAATTAATGATTGCTTTTTTATTATTTCTGAA
AACGTTTCTGCTACATCGGCTGTTTGACGAAATAGAAAGATGGTATTTGT
ATTATGGCTAATTACTGTGTCGTAACAATCTGATCTCTTAAATGAATTCT
CGGCCCCTCTTGGTCACGTTACTGAAAAAGTTATCATGATACTAGGCGGA
CTTTTTAATTTCCATCCTGGGATAAAATAAACACTCCTACGCACTTCTAA
ATTAACATTTGTCCATCCGTCCGTTTGTTCGTTATGAACTTTTCTCCAGT
TTGGCTCGTTCCATTTTTCTGATATTTTGCACATAGAATCAAAATGGTAA
ACCCTCAATTGTGACGGAGCTCTTTTCAAAGAAATTATTTTTTTTTGCTC
AATTTGGGCCAAAATATGCCGAAAAGTGAGGATTTTTGAGATTTCCTCGA
GTTTGAAATCATTAAATGTTTCTGCTTTTTCGCATAAAAACAGAGCACCA
TCATAGGGAAGAGATGGTCGAAGCAGATTTCGTAAAAAAGAATTTCAGCT
CAGAAAATGAATTTCTAGCTATAAGAATCACTGTTGTATAAGCATAGATT
TTCTTCCCTAAATCACTCATGTTTTTTGCTATTGAAACTGTACCTTTACA
GAAGATTGGCATTTAGGCTTGAAATTTTGAGTTGCTAAAATGTTTTTTAT
AAGAACTGGGCCAAATTCTTAATTTATTAAAAGCACTTCGGAAAAAACAA
ACTCGGGGTAAAGGGTCTTTACGAGGAGCCAAATTTTCTATTGACCCCTC
TAGAAACCAATATAGTTTGTTCTCATAAAAAGAATATTTCCAATAACCCT
CTTTTTCTCTACACAGCTTCAAACAGGAGATCCAAAGAATGCCAAATACA
AGGGAGCATTGGATTGTGCCAAACAATTATACAAAGAAGAAGGACTTTTC
CGTGGTGTCTACAGAGGAACTGCTGCTACTTTACTCAGAGGTATGTTTCA
TAGTATAAGAGGTTTCATAGGGGGCGATAGAACCTTCTCCAAGTAAAATA
GAGTGTGTTTTTAGGGGGGGGTCAACAGAATTCGAGGTTGGTAATGTTAT
GGTCAAAATATGTAGCAAATTCCATAATAATTAGTTTCCCTTTTACTCTT
AGGTTCCAAATAAACGGGCCCCTTGCTTGTTAATTTTTCTAAACTTTTCC
AACCCCCGGACCTTATTAGGACCCCCCCCGCTTATTAATTTTTAAGAATA
TTTTCAGCTGTCAAAGAGAAGGCCCCTTATTTTGTTCTAAATAGCCTGAT
TTTAGCCTATATTTACCTTATTTTTGGGTTTTCAGAAGTACAATCTCCTA
TTCCCACGGGAATTAACCCCCCTGTTTATTAAAATCTCGAAAATTTCCAA
CCCCCCCCGCCGTTTATTTGGAACCTAAGTGTATTATGGAAAATTAAAAT
TTTTTTACCTTCAACATTTCATTTGTTAAATATTACTGGGGCTGGTACTA
AACATTTTTGTAAGGGGTGCTTATATTAGGGGGATGAAATATAAATCAGG
GTGCTGATTGTGTCAATCAAAGATATCTATAGTGAGAATTCAAGTAAAGG
CTCGAACTTTTTATATATACTTGGTTTTTTAGGGAATGAATGCCTTTTTC
AATGTTTGAAAATTTTCTATGTGCAAATTTATCTAATCTCGATGAATTTG
CTGTAGAGTATTCCGTTTTTTTTATTGTAAAAGCATGACTCGAATTTTCT
GAGATTTTTCAAACGTGTCAGGTCAAATAAGAGGTCCCATCTCTCTGCTT
AATATATTTGAAAACGGAACTTTTCTATAGTTTTTATTTCCTTTATCCTC
GAATGATTTCTAACATCTCTAGGATGTTTAAAGTTTGTTTTTACAAAAAA
CTTCACAGGATTAGAAATTAACTGGGTCATTTAAGTCAGTGATTCGTTTA
AAAACATTGTCATTTTTCTTGTATTTACGTTTCGTAACTCTCAGGGGTCC
GGTGAAACATGGCACTGGTCTACTTATCCGAATCTCATCTCAGGAAGTTC
AAGTGACCAAATAAGTGATACAACTTAGCCGCTTACTACTTGTCCGTACT
ACTTATCGAGATTCTGCTGTGGCCTTTCCAATGGAAATAATCTGTTTTCC
ATATCCACTCTCATCCATTCATTTCCATCTCTTTACTTTATATGCTAGAT
GTCCCTGCCAGTGCAGCTTACTTCGCCGGATACGAAATGCTGTTGAGAAG
TCTCACACCTGAAGGAAAATCGTAAGGTTTCTCCATCCGTTCGTTATATT
TCGATTTTGTAGATCACATTCACATTTATTATGGTTCCATGTTCTATTTC
GAAACTTAAATGGAGCCATTATACTTGCACATTTGCGAATTGTGTCAACT
ATACTGTAACCTATTAAAAGGTTCCACTTTGTTTCAGAACGTGTGATGAG
CCTTTAAAAGTGGTTTGAACATCTTTTTTCTAGTGTGATTAACTACTTAG
AGAGGTTGACCTGCTAATAAATTACTCCCTGATTAATTCTGTATAATTTA
TCTTTTTTTCATAGACGTGCTGATATGAGCCCATTGAGGATCCTAGTGGC
AGGCGGTACAGTTCTTTCTTCCCTGAAATTTCCCTCAATATCACATGGAC
CCTAATCATTCTCTCTAACTACGGTCTCTTCCCCCTTTTTTCTTTCAATG
AAAAATTTATTCTTCGTTTTTTGATATTCTTCGTCCGGTATATTGTCGAG
TTTTTCTTCTGTGATACATTCATTATTCATGACAGGTCTTCCGAATTCCA
ACTATTTATAAATCGCTCCTCTGTCTATACGTTTTAGTCGTTTATTTTGT
TTCTCAAGGGAAAAAATGTCCTCGTTAAAAGCGAAAAGCTATTTAAGGGT
GATTTTATACCACTGTCTGTTATCTTCCCTCTCGTCTTAATTTCTCTCTT
TTGGTTTCTAGCACTTCCCTCTATTCTTCGTCGTTTTTTTAACTTATAGT
AATGAGAAATCCATCCTTTGTGTCAAATAAAATTCCGGAATTCCAATAAT
GTGCCTCGACACTTATAGGAGGCAAAGACTGAGATAATCTTTTTGTGGCT
GTTGTTACTTATGGTTATCTAAGAAATAGCTTGGTGTTGTAAAACACAAC
ACAGATTTTTTGACTATAAACTTAAATCTATAAACCAATTTGAAAGACAT
GAAATTCGTTTTTCAGTTTAAAAGAATTACAGTAAAGAAAGCTTAAAAAC
CCAAAAAACCTCAAAACATTGGTTTTCAGTGTACTTTTTTACATAAAACC
TTTTTCCTGTGTGTTTTTATTAGGCCACTAAACTGTTATAATTTAATCTT
TCAATTTGTGGAAGTAGAGGTCTATGAAAACGTCAATTGGGGTTTGAAAG
CTTATGTTTGGTTTTCATGAAACATCCGTTACTCCATATCCTTTCATACA
TCCTCAAATTCTCTTCAACTCTAAGATATACCATGACCACACTCAATTGC
ATATTTTTTGCCACACTTAAACCTCTACTCTGTGCTGTTCCTATATTTTA
CCGAAGTCGAATTTTTGAAGGACACTTTTTGCCTGAATAAGTATTTAATT
AAAACAATCCATCAAGGTATGGATGAGATTATCCTGAAAGAACTCATTTA
GTGACAAATTAATGTTAAAGCCACCTAACCCAAACCCCCAAACCCCCAAC
CCAATGAACTCCCATACCAACCCCCGCCAACCCCCGCCATTCCAAAGCTT
GATTGTTAACTCAAGATATTGCAACATCTATTTTTTTGTAGGTTCGGCTG
GTATCTTGAATTGGATCGTTGCTATTGGTCCCGATACATTAAAATCTCGA
TTCCAAACAGGTTTGACTTTTTTTGAGATCCAAAGCACTTTAAAATCAAC
GTGTTTATACATTTTGCCAATTTAAATGATAGATTTTCTTTTTCAAGAAA
AGTGGAAATGGAAATGAATTGGAAATATTGGAACCTAATATTATTCTTTC
TCTAAAGCCTGATATTTGTCGATACTACACTCTTCGTTGAGGGTGATTTC
AAAAGAACTGACTGGTAGCCTACGGTGGAACAAAAGCCATCAAATTTTGA
TTGTTATTTTAATTTACTTCACAGCTCCTGCTGGTACGTACACTGGAGTT
CGAGAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007960XLOC_007960Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014235-exon-sc0000183-1575043694:168412..168441TCONS_00014235-exon-sc0000183-1575043694:168412..168441Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1575043694:167830..167972TCONS_00014235-exon-sc0000183-1575043694:167830..167972Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1575043694:167418..167507TCONS_00014235-exon-sc0000183-1575043694:167418..167507Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1575043694:167052..167179TCONS_00014235-exon-sc0000183-1575043694:167052..167179Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1575043694:166498..166588TCONS_00014235-exon-sc0000183-1575043694:166498..166588Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1575043694:158902..159025TCONS_00014235-exon-sc0000183-1575043694:158902..159025Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1575043694:157621..157693TCONS_00014235-exon-sc0000183-1575043694:157621..157693Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1575043694:157287..157327TCONS_00014235-exon-sc0000183-1575043694:157287..157327Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1575043694:156032..156100TCONS_00014235-exon-sc0000183-1575043694:156032..156100Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1575043694:155736..155767TCONS_00014235-exon-sc0000183-1575043694:155736..155767Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:168412..168441TCONS_00014235-exon-sc0000183-1510915933:168412..168441Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:167830..167972TCONS_00014235-exon-sc0000183-1510915933:167830..167972Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:167418..167507TCONS_00014235-exon-sc0000183-1510915933:167418..167507Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:167052..167179TCONS_00014235-exon-sc0000183-1510915933:167052..167179Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:166498..166588TCONS_00014235-exon-sc0000183-1510915933:166498..166588Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:158902..159025TCONS_00014235-exon-sc0000183-1510915933:158902..159025Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:157621..157693TCONS_00014235-exon-sc0000183-1510915933:157621..157693Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:157287..157327TCONS_00014235-exon-sc0000183-1510915933:157287..157327Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:156032..156100TCONS_00014235-exon-sc0000183-1510915933:156032..156100Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1510915933:155736..155767TCONS_00014235-exon-sc0000183-1510915933:155736..155767Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:168412..168441TCONS_00014235-exon-sc0000183-1491911889:168412..168441Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:167830..167972TCONS_00014235-exon-sc0000183-1491911889:167830..167972Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:167418..167507TCONS_00014235-exon-sc0000183-1491911889:167418..167507Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:167052..167179TCONS_00014235-exon-sc0000183-1491911889:167052..167179Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:166498..166588TCONS_00014235-exon-sc0000183-1491911889:166498..166588Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:158902..159025TCONS_00014235-exon-sc0000183-1491911889:158902..159025Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:157621..157693TCONS_00014235-exon-sc0000183-1491911889:157621..157693Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:157287..157327TCONS_00014235-exon-sc0000183-1491911889:157287..157327Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:156032..156100TCONS_00014235-exon-sc0000183-1491911889:156032..156100Clytia hemisphaericaexon
TCONS_00014235-exon-sc0000183-1491911889:155736..155767TCONS_00014235-exon-sc0000183-1491911889:155736..155767Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000183supercontigsc0000183:155736..168441 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.205	51.4585	42.4618	39.8187	57.4819	50.3217	83.7923	115.047	193.887	203.192	204.65	137.025	85.915	93.0364	123.62	171.205	117.25	102.9	47.5836	83.3083	44.6758	47.6383	59.942	64.0464	84.6263	83.4412	131.737	116.527	111.174	84.1354
Blast
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BLAST of TCONS_00014235 vs. Swiss-Prot (Human)
Match: MCAT (Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.263e-88
Identity = 145/242 (59.92%), Postives = 177/242 (73.14%), Query Frame = 3 
Query:   84 QPPSAFKNFVAXXXXXXXXXXXXQPLDTIKVRLQTQNVK-PGETPFYTGTLDCAKKTIQKEGFRGLYKGIMTPLVGVTPIYALCFLGFGVGKKLQTKDPNEELTLLQIGNAGLLAGVFTTVIMAPGERIKCLLQLQTGDPKNAKYKGALDCAKQLYKEEGLFRGVYRGTAATLLRDVPASAAYFAGYEMLLRSLTPEGKSRADMSPLRILVAGGSAGILNWIVAIGPDTLKSRFQTAPAGTY 806
            +P S  KN +AGG GG CLV  G PLDT+KVRLQTQ    PG+ P Y+GT DC +KT+ +EG  GLY+G+  P++GVTP++A+CF GFG+GKKLQ K P + L+  Q+  AG+L+GVFTT IM PGERIKCLLQ+Q      +KY G LDCAK+LY+E G+ RG+Y+GT  TL+RDVPAS  YF  YE L    TPEGK  +++S  RILVAGG AGI NW VAI PD LKSRFQTAP G Y
Sbjct:    6 KPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQIQASS-GESKYTGTLDCAKKLYQEFGI-RGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKY 245

HSP 2 Score: 83.9593 bits (206), Expect = 6.677e-19
Identity = 62/173 (35.84%), Postives = 95/173 (54.91%), Query Frame = 3 
Query:  156 PLDTIKVRLQTQNVKPGETPFYTGTLDCAKKTIQKEGFRGLYKGIMTPLVGVTPIYALCFLGFGVGKKLQTKDPN--EELTLLQIGNAGLLAGVFTTVIMAPGERIKCLLQLQTGDPKNAKY-KGALDCAKQLYKEEGLFRGVYRGTAATLLRDVPASAAYFAGYEMLLRSLT 665
            P + IK  LQ Q    GE+  YTGTLDCAKK  Q+ G RG+YKG +  L+   P   + F+ +   K + T +     EL+  +I  AG +AG+F   +  P + +K   + QT  P   KY  G  D  ++L ++EG+   +Y+G  A ++R  PA+AA F G+E+ ++ L 
Sbjct:  130 PGERIKCLLQIQ-ASSGESK-YTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKS--RFQTAPP--GKYPNGFRDVLRELIRDEGV-TSLYKGFNAVMIRAFPANAACFLGFEVAMKFLN 295
The following BLAST results are available for this feature:
BLAST of TCONS_00014235 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCAT3.263e-8859.92Mitochondrial carnitine/acylcarnitine carrier prot... [more]
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