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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014191 ID=TCONS_00014191|Name=TCONS_00014191|organism=Clytia hemisphaerica|type=transcript|length=2081bp
TTTAAATTCCACCTTAAAAATCatattaacaaaaaaatttatttgtatTC
TTTTCACGCGTATCTATTTACATTATGTATAAATTAAATGAACGAAAAAT
TATAGCTTGTGAATTTAAACCATATAAAACTacaaaaatttcattgaaaa
cttctctaaaaaactataaaatatttttctttaattctCAATGTATGATA
AAAGATAGAGTGCAATGTGTTTTTACTAAAGggatattcaaaaaaaaatt
tcagtgctTCAAAAAGTTTATTCAATCAATTATTGataatttgatttaaa
attccACCTTTGTAGactcatttttagaaatttcaaaatcaaatgaaaat
aacTGAGCCACAATTTAGAAGCTTTTCTTAGGCTCTGTTGAAAAAATTCt
ggctttaatttttttaaaggaaaggagaaaatcaaaacatagcTCTACCC
GTTTATGGCTAAAAACCTACTACTTGCTGCATTCGATCTTCCCCATAAAT
GCAATTCTGATTCCTAATAAAATATTTGtatatactatttgtaaagaTAT
GCAATTTTGGATACCAACTAAAAACTTGATAAGCAATCTGAGAGAATCCA
GATTGCAACCAGTTGACCTTTTATCTTTTAGCTTTTGCCACAATCACTCC
AATTGGTTCCACATGAAGCAAAtacaataattaaaataaATACCAATATA
ACACATACGATGGCGACtgtaattttcacatttttcataaacattGTTCT
CTCAAGAGTTCTGCTTGATTTCTTAAAAGTCATGgcctaaaataagaaaa
tttgtttaatgGTGATCGAATTGTAATAAATTTCTAGATAACAGTTTAGG
GTTAAAGGCATCACACACACAAATACTAGACTTTGATAAACCTCATTCAC
TTACAGAAGTACTTAGGTCATCAGTCTTTTCAACAAGAAGCTCTAGTTTT
TCTCCTCGTTGTGCTATTGAATCTGGTGAGAGGAAAAGAAATGTGTAGGT
GTGGTAAATTTATCAAACCATGTGATATACGTACATAAATGGATACATAC
AGCTTCATGAAAACAGTTCTTTTACCAGATTTACCAAGATGTCAAAGCTT
CTATTAATACACAGAACACAATTTTGTCCATTGCTGATCATAACCGAGca
tatttcaaattaatttcaagaaaataaagTATTACGTAAAGCTGtacaac
aaagaaaagaaagctGTTACCAATATTATTGATCATGATCCCTTTCAATT
CACTCAAATCTTCCTGTACTCTCTGCATTTTGCCAGAATCTCCTTTCGAG
AAATGTCGCTTAAatgaaaacaagctagatgctgaatggacctacctgat
gatgaaagttagatagcaatgcgaggagaaaaatgaaaaaaatcagtcaa
attgaatcatgcttgatgatgAGCactgttatcaataatgtttttgtgtg
aaaaacatagaaaaataagaaaaaatccaacaaaaatctgcaaaaacggc
aatttccggtattttcggcaggaaaaaaaaatttctcaaaaatcaaactc
ggctatgttttgggcattgttaatacacatcttcgtgcaaaaaatcagaa
aagactaatgataaaatctcgagaaaatgccaaaaaaacagtttttccgg
catatttttcgaaaatcgggctctgtcacattttgggcattgccattttg
catcaatgtgccaaaaatcagaaaaaactaattagccaatcctgagaaaa
gctggtaacagacggacggacgaacggacaaacggacggacatcggttaa
tttataggaccttcaccgGTGTACCCGGAGGTAGGCTCAAAAATTATGTA
CAGTATGGGTCCGTTCATTTTTTGGATTTAGGTGACCATTGCTGCTCAAA
TGATATAAAAAATTATCCAGTTCAAATAAAAGACAGTAAACCATGAATAG
ATATTTTGAGTGAAACATattcaaaaacaagaaaatacgTACCATCTCAC
TGGCTAAAACACGTGAAAATTCACTCTGCATTGCATAGGGTAGCGCAGTA
TCGGCCCGATTCTGGTATGTTTTGGTGAACC Run BLAST on NCBI transcript from alignment at sc0000183:118978..122085+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014191 ID=TCONS_00014191|Name=TCONS_00014191|organism=Clytia hemisphaerica|type=transcript|length=3108bp|location=Sequence derived from alignment at sc0000183:118978..122085+ (Clytia hemisphaerica)
TTTAAATTCCACCTTAAAAATCatattaacaaaaaaatttatttgtatTC
TTTTCACGCGTATCTATTTACATTATGTATAAATTAAATGAACGAAAAAT
TATAGCTTGTGAATTTAAACCATATAAAACTacaaaaatttcattgaaaa
cttctctaaaaaactataaaatatttttctttaattctCAATGTATGATA
AAAGATAGAGTGCAATGTGTTTTTACTAAAGggatattcaaaaaaaaatt
tcagtgctTCAAAAAGTTTATTCAATCAATTATTGataatttgatttaaa
attccACCTTTGTAGactcatttttagaaatttcaaaatcaaatgaaaat
aacTGAGCCACAATTTAGAAGCTTTTCTTAGGCTCTGTTGAAAAAATTCt
ggctttaatttttttaaaggaaaggagaaaatcaaaacatagcTCTACCC
GTTTATGGCTAAAAACCTACTACTTGCTGCATTCGATCTTCCCCATAAAT
GCAATTCTGATTCCTAATAAAATATTTGtatatactatttgtaaagaTAT
GCAATTTTGGATACCAACTAAAAACTTGATAAGCAATCTGAGAGAATCCA
GATTGCAACCAGTTGACCTTTTATCTTTTAGCTTTTGCCACAATCACTCC
AATTGGTTCCACATGAAGCAAAtacaataattaaaataaatacCTGTAAC
gaataaaagaaattaattaACGATGCCTTTTTATTAGCTTTCCTTTTTAA
AATTAGCATTTTCAAACCGTTATCAGTCTTGTCAGATTTAGGCccaaaaa
caaagataaaaagcaACGAGAATCAGATAAATAGTTATTTgaaatatacc
gggtgcaccaaaaaaaagtatacaactttgtcgagatattgtgagcttca
ggatttaatttctttgttcattctttttttattgtatagaggatgctcta
acttgaattttgagctatcatacattaaatttgaaaaagtagttcggaAG
TTATtaccaaaaaactgactttttttccatgtcgaaatttcaaaaaatca
ttaaaaacagcgagcaaacttttctctcgacacttaccttctttacacat
aaaaataccaaaaaaatgcaactgtgttcatcaaaacttaCGGAATTTGA
TAGTATGGTAAAACTATTCCCACGTGggttaatatttttggaaaggctaa
aaaaatttttgggaaatctccaagagaggttttgatgCTATGTAtgtgtg
ctatgtgagaaaacctttgaaaaaatatatcacCATTTCTagactagttg
ctcaaagaacttgggtctgcattgagtttgctggtgttggaaatgttcat
gacgtgcaaataagatggagaaactGTTGGAAAATATANAAGATATGCAA
TTTTGGATACCAACTAAAAACTTGATAAGCAATCTGAGAGAATCCAGATT
GCAACCAGTTGACCTTTTATCTTTTAGCTTTTGCCACAATCACTCCAATT
GGTTCCACATGAAGCAAAtacaataattaaaataaatacCTGTAACgaat
aaaagaaattaattaACGATGCCTTTTTATTAGCTTTCCTTTTTAAAATT
AGCATTTTCAAACCGTTATCAGTCTTGTCAGATTTAGGCccaaaaacaaa
gataaaatgCAACGAGAATCAGATAAATAGttatttgaaatatatttcaa
aagaatGCGAAGTGACATACCAATATAACACATACGATGGCGACtgtaat
tttcacatttttcataaacattGTTCTCTCAAGAGTTCTGCTTGATTTCT
TAAAAGTCATGgcctaaaataagaaaatttgtttaatgGTGATCGAATTG
TAATAAATTTCTAGATAACAGTTTAGGGTTAAAGGCATCACACACACAAA
TACTAGACTTTGATAAACCTCATTCACTTACAGAAGTACTTAGGTCATCA
GTCTTTTCAACAAGAAGCTCTAGTTTTTCTCCTCGTTGTGCTATTGAATC
TGGTGAGAGGAAAAGAAATGTGTAGGTGTGGTAAATTTATCAAACCATGT
GATATACGTACATAAATGGATACATACAGCTTCATGAAAACAGTTCTTTT
ACCAGATTTACCAAGATGTCAAAGCTTCTATTAATACACAGAACACAATT
TTGTCCATTGCTGATCATAACCGAGcatatttcaaattaatttcaagaaa
ataaagTATTACGTAAAGCTGtacaacaaagaaaagaaagctGTTACCAA
TATTATTGATCATGATCCCTTTCAATTCACTCAAATCTTCCTGTACTCTC
TGCATTTTGCCAGAATCTCCTTTCGAGAAATGTCGCTTAAatgaaaacaa
gctagatgctgaatggacctacctgatgatgaaagttagatagcaatgcg
aggagaaaaatgaaaaaaatcagtcaaattgaatcatgcttgatgatgAG
Cactgttatcaataatgtttttgtgtgaaaaacatagaaaaataagaaaa
aatccaacaaaaatctgcaaaaacggcaatttccggtattttcggcagga
aaaaaaaatttctcaaaaatcaaactcggctatgttttgggcattgttaa
tacacatcttcgtgcaaaaaatcagaaaagactaatgataaaatctcgag
aaaatgccaaaaaaacagtttttccggcatatttttcgaaaatcgggctc
tgtcacattttgggcattgccattttgcatcaatgtgccaaaaatcagaa
aaaactaattagccaatcctgagaaaagctggtaacagacggacggacga
acggacaaacggacggacatcggttaatttataggaccttcaccgGTGTA
CCCGGAGGTAGGCTCAAAAATTATGTACAGTATGGGTCCGTTCATTTTTT
GGATTTAGGTGACCATTGCTGCTCAAATGATATAAAAAATTATCCAGTTC
AAATAAAAGACAGTAAACCATGAATAGATATTTTGAGTGAAACATattca
aaaacaagaaaatacgTACCATCTCACTGGCTAAAACACGTGAAAATTCA
CTCTGCATTGCATAGGGTAGCGCAGTATCGGCCCGATTCTGGTATGTTTT
GGTGAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014191-exon-sc0000183-1491911889:118978..119666 | TCONS_00014191-exon-sc0000183-1491911889:118978..119666 | Clytia hemisphaerica | exon |
| TCONS_00014191-exon-sc0000183-1510915933:118978..119666 | TCONS_00014191-exon-sc0000183-1510915933:118978..119666 | Clytia hemisphaerica | exon |
| TCONS_00014191-exon-sc0000183-1575043694:118978..119666 | TCONS_00014191-exon-sc0000183-1575043694:118978..119666 | Clytia hemisphaerica | exon |
| TCONS_00014191-exon-sc0000183-1491911889:120694..122085 | TCONS_00014191-exon-sc0000183-1491911889:120694..122085 | Clytia hemisphaerica | exon |
| TCONS_00014191-exon-sc0000183-1510915933:120694..122085 | TCONS_00014191-exon-sc0000183-1510915933:120694..122085 | Clytia hemisphaerica | exon |
| TCONS_00014191-exon-sc0000183-1575043694:120694..122085 | TCONS_00014191-exon-sc0000183-1575043694:120694..122085 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:118978..122085 + |
Blast
The following BLAST results are available for this feature:
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