|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014190 ID=TCONS_00014190|Name=TCONS_00014190|organism=Clytia hemisphaerica|type=transcript|length=753bp
CCGAAAATAACAAACTACacgattttttataaaagctgtttttaaaattc
attaaaaaaaatgtacTGGTTATtgttaaaaagGAAAGAGTAATGAAACT
TTTCGACGAATAACGCAAATTGGTTTGAACACAAGAAATTCGAAACTTAC
TGTGACAGTGGCCNTAAAAAAACTAAGTTCTGCCTGTTCTAATTTTAATT
TAAAGGAAAGAGTAATGAAACTTTTCGACGAATAACGCAAATTGGTTTGA
ACACAAGAAATTCGAAACTTACTGTCACAGTGGCGTTTGTTAATTGCACG
ACATCCAGTAGAATGAAGAGTAAAAATGCCACAATGCTGGTCAGCGTACT
GACGATCATCACCAAAACACGTGGATTGCCTGTCATCTTGGTGGAATACT
GAAAGATgaaagtatttaattttttaatattaattattttttatttaatt
cttgGTAAATTATAATTTGCTTGATTGGAGTCTTTTGTAATTAGTGTAAT
GCAGTGATATAGCTGCTATAATAAGAAAGTTATTACGTGATAATATGAGT
TTAAACTGTATAGATTACAGTTACACTTTTCATTatctatttttctaaat
tttaaatgcTTGAGAGCTTTTATAATCGTCCAAAATGTTCCAAAATTCTG
AATATCTTATCTAGTATGGTCTAGAACCACTAATTTATCAATAAAATACT
TTGGCGCATGTTTTTTAGGCCGAAAACTTCAAATATATTTCCGtctaaca
att Run BLAST on NCBI transcript from alignment at sc0000183:101162..103999+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014190 ID=TCONS_00014190|Name=TCONS_00014190|organism=Clytia hemisphaerica|type=transcript|length=2838bp|location=Sequence derived from alignment at sc0000183:101162..103999+ (Clytia hemisphaerica)
CCGAAAATAACAAACTACacgattttttataaaagctgtttttaaaattc
attaaaaaaaatgtacTGGTTATtgttaaaaaggtaaaaacttttttgta
ttaTCAAACCATTTCTCGAGGAATTGAAGTTAGAAGTTTGATTATGGTTC
TGAAGACTTCAGGATTTCAACTATAGGGGGCCTATAAGGGGCCTGACCTT
CAAAACAGAAGCTTACAGTAATTGATATTTATTCATCCCTTCCTTAAAAA
CCTTCTCAGGTAGCCACCAAGAGATTCAAGGTCAATTTATACTGTAAATG
TGTTGATTTGTATAAATGCTCCAACCTAGCAACCAAGGAGAATGTTCAAG
CGAACTAAAGGAGTgcaagtaaaaataaaattttatttgctgtaGCTTGA
GAATAACATGAGATTAAAAATGTTTGTCGTTGACATAAAGTAGGATGTTA
AAGTCTATATACTAATCAATCACTCGTGAgtgtttatttcaaatttacaa
GTGCTGGTTTGGATCAATTTAATCCGAAAGTATCACATCAGATttttttt
ggttagattttttCATCCGAGTGTGTTAGATGCTTTTATCTCCAGAAAAG
CATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaac
gtactttcaacacaaaaagtttcagccttacactccaactaaacaatgag
atagagggtaccactttttattgtgggttttaaggggtatccactggtat
atTATCTGTTGGTATCTTTGTTTCTAAAGAGACGTAGAGTCCATTCACAA
AGTGATCTTTTTATAGAGAATGATTTTACATGTTTTGCtgacaatatttt
ttctctttaaGCAGGTTCTAGGCATATTGCCAAAATATACCCGGAAAAAA
ATGTGTTAGTGTAAAAGTAAAACTTTGACAGTTTTAAAAACACGATTCAG
GAAACAGGAAAAATATGACTTGGATATCTAAAAATAAGGATGAACTTTTA
TCTTTGATGTATGGTACAACCGACTGGCTGAGAAACATAGCTGCTAATAT
ATGTTCAACACTTATCGAACTAAAATTGCTTGTCTAGACAACATATCGTT
GAGCTTATCTGACAGTCTACaagtctttttataagaacatccaaaatctt
gaaagcttttaagcctaaaaaagttcttaacctgttcttattttcactat
acTTTGAGAGTGTTTTTCTACTATTTCCTAAAAAATAGAGTCCGGAATGC
CTTACAAATGTACTCAATTTGTTTACGATCATATTTTGGCTATAGATGCC
TTATGCTctttatttagtttgttcttataaaaaaactaagTTCTGCCTGT
TCTAATTTTAATTTAAAGGAAAGAGTAATGAAACTTTTCGACGAATAACG
CAAATTGGTTTGAACACAAGAAATTCGAAACTTACTGTGACAGTGGCCNT
AAAAAAACTAAGTTCTGCCTGTTCTAATTTTAATTTAAAGGAAAGAGTAA
TGAAACTTTTCGACGAATAACGCAAATTGGTTTGAACACAAGAAATTCGA
AACTTACTGTCACAGTGGCGTTTGTTAATTGCACGACATCCAGTAGAATG
AAGAGTAAAAATGCCACAATGCTGGTCAGCGTACTGACGATCATCACCAA
AACACGTGGATTGCCTGTCATCTTGGTGGAATACTGAAAGATgaaagtat
ttaattttttaatattaattattttttatttaattcttgGTAAATTATAA
TTTGCTTGATTGGAGTCTTTTGTAATTAGTGTAATGCAGTGATATAGCTG
CTATAATAAGAAAGTTATTACGTGATAATATGAGTTTAAACTGTATAGAT
TACAGTTACACTTTTCATTatctatttttctaaattttaaatgcTTGAGA
GCTTTTATAATCGTCCAAAATGTTCCAAAATTCTGAATATCTTATCTAGT
ATGGTCTAGAACCACTAATTTATCAATAAAATACTTTGGCGCATGTTTTT
TAGGCCGAAAACTTCAAATATATTTCCGtctaacaatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014190-exon-sc0000183-1491911889:101162..101244 | TCONS_00014190-exon-sc0000183-1491911889:101162..101244 | Clytia hemisphaerica | exon |
| TCONS_00014190-exon-sc0000183-1510915933:101162..101244 | TCONS_00014190-exon-sc0000183-1510915933:101162..101244 | Clytia hemisphaerica | exon |
| TCONS_00014190-exon-sc0000183-1575043694:101162..101244 | TCONS_00014190-exon-sc0000183-1575043694:101162..101244 | Clytia hemisphaerica | exon |
| TCONS_00014190-exon-sc0000183-1491911889:103330..103999 | TCONS_00014190-exon-sc0000183-1491911889:103330..103999 | Clytia hemisphaerica | exon |
| TCONS_00014190-exon-sc0000183-1510915933:103330..103999 | TCONS_00014190-exon-sc0000183-1510915933:103330..103999 | Clytia hemisphaerica | exon |
| TCONS_00014190-exon-sc0000183-1575043694:103330..103999 | TCONS_00014190-exon-sc0000183-1575043694:103330..103999 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:101162..103999 + |
Blast
The following BLAST results are available for this feature:
|
