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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014187 ID=TCONS_00014187|Name=TCONS_00014187|organism=Clytia hemisphaerica|type=transcript|length=1035bp
AAATTTTGtcatgttttatttttcttttcagagaAAATCTAATCAAAGTG
ATTTTCTTCTACGGGGAGATTTCCAAACACATTCATACACAAGAAGCTTC
ATTTGATTTCTACCAATTTCTAGgtgaTATGGGTGGAGAAATCGGTTTGA
TGTTGGGCGCAAGTTTGCTGACTTTTGTTGAGTTCATGGATTTGATCATT
TTCCTTCTCTACCATCAATTCTTAAGATTGTATAAGAATAAGAAGATTGA
TGAGATTTTTGAAGAAGAGCTTGGAAACGAAGAAAAAGATTTGTAATCCG
ATCGGGGATGGGTTTATGATCCGCTGTCTTTGAGAAGAAGGAATAGGGGA
TAGTGGAGAAGGTTTTTAACCCGATCCGGGGATGCGAAGGAGGAATCGGG
GAAAGATTTATTATCCGATCGAGATAAAGATGATTGGTGAATTCTCCAAG
GCACAATGGGAGACGAAGAGGAAACACTTCCAGAAAAAACTTATGTTCAG
CCCATGAAACTTCTTTAAATTCGAACCAAGATGTTCGAGTGTTGGTTATT
TTGGCACAAAAGTGAATTTGTATTAAATaaactacttttaacgaagggAT
AAACACCCCCCCCATTTCATTGACCCGATCAGTTTCAATAAATTGAAGGG
GCTAAACTAACGATGCTACGATGCAGATACaatagataaaaaatgacatc
aCTTTCAAAATTGGATAATCGAAAGTAATGTATTGATGCTATAATTCCAA
CCTTATATTTTTTACGTCGGGAATGGAGAATGATTGATGACAAAACTATA
AAGACATTTCATTAGCACTAATTTATTTTAGTTCAAAATATCATCGAATG
TAGATAAAAATTTTACAAGTAACTAGACAAGAAGTTCCTTCGTTGATTTT
CGTGAGGTCAGTTCTCTTTTGATATGTTCGTAATTTTGTGGTCTTCGAAA
TTTGCTAAAAACTGAAGTAAAgtttttttttctttcaaaaatcttgatat
CGAATATTGGAAGTTTATGAATTTTTATAACTTTG Run BLAST on NCBI transcript from alignment at sc0000183:67405..68737+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014187 ID=TCONS_00014187|Name=TCONS_00014187|organism=Clytia hemisphaerica|type=transcript|length=1333bp|location=Sequence derived from alignment at sc0000183:67405..68737+ (Clytia hemisphaerica)
AAATTTTGtcatgttttatttttcttttcagagaAAATCTAATCAAAGTG
ATTTTCTTCTACGGGGAGATTTCCAAACACATTCATACACAAGAAGCTTC
ATTTGATTTCTACCAATTTCTAGGTAAGATTTGAAGACAAACTTATACAA
ACTTTCCGCCATTGAATGTTTAAATCGAAACACTCTGCATTCTCTCGTTC
CAAATCTTGTCATACTATCAAATATACTttccaatagatatgcttttcTA
CCGTTTGGTATATTTGATTCTACTCAAAATTCCTTTCCAACGAGTACAAA
ATCGAGACCTTTAACAGCCATGGTAGTTATAGATAGACTTTAAAGGCTCT
GCTAGTTAAATTACAACGGGATAATCACTGTTTTACTGTGAATACACGAT
TTaatattgtttacttttcaggtgaTATGGGTGGAGAAATCGGTTTGATG
TTGGGCGCAAGTTTGCTGACTTTTGTTGAGTTCATGGATTTGATCATTTT
CCTTCTCTACCATCAATTCTTAAGATTGTATAAGAATAAGAAGATTGATG
AGATTTTTGAAGAAGAGCTTGGAAACGAAGAAAAAGATTTGTAATCCGAT
CGGGGATGGGTTTATGATCCGCTGTCTTTGAGAAGAAGGAATAGGGGATA
GTGGAGAAGGTTTTTAACCCGATCCGGGGATGCGAAGGAGGAATCGGGGA
AAGATTTATTATCCGATCGAGATAAAGATGATTGGTGAATTCTCCAAGGC
ACAATGGGAGACGAAGAGGAAACACTTCCAGAAAAAACTTATGTTCAGCC
CATGAAACTTCTTTAAATTCGAACCAAGATGTTCGAGTGTTGGTTATTTT
GGCACAAAAGTGAATTTGTATTAAATaaactacttttaacgaagggATAA
ACACCCCCCCCATTTCATTGACCCGATCAGTTTCAATAAATTGAAGGGGC
TAAACTAACGATGCTACGATGCAGATACaatagataaaaaatgacatcaC
TTTCAAAATTGGATAATCGAAAGTAATGTATTGATGCTATAATTCCAACC
TTATATTTTTTACGTCGGGAATGGAGAATGATTGATGACAAAACTATAAA
GACATTTCATTAGCACTAATTTATTTTAGTTCAAAATATCATCGAATGTA
GATAAAAATTTTACAAGTAACTAGACAAGAAGTTCCTTCGTTGATTTTCG
TGAGGTCAGTTCTCTTTTGATATGTTCGTAATTTTGTGGTCTTCGAAATT
TGCTAAAAACTGAAGTAAAgtttttttttctttcaaaaatcttgatatCG
AATATTGGAAGTTTATGAATTTTTATAACTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014187-exon-sc0000183-1491911889:67405..67527 | TCONS_00014187-exon-sc0000183-1491911889:67405..67527 | Clytia hemisphaerica | exon |
| TCONS_00014187-exon-sc0000183-1510915933:67405..67527 | TCONS_00014187-exon-sc0000183-1510915933:67405..67527 | Clytia hemisphaerica | exon |
| TCONS_00014187-exon-sc0000183-1575043694:67405..67527 | TCONS_00014187-exon-sc0000183-1575043694:67405..67527 | Clytia hemisphaerica | exon |
| TCONS_00014187-exon-sc0000183-1491911889:67826..68737 | TCONS_00014187-exon-sc0000183-1491911889:67826..68737 | Clytia hemisphaerica | exon |
| TCONS_00014187-exon-sc0000183-1510915933:67826..68737 | TCONS_00014187-exon-sc0000183-1510915933:67826..68737 | Clytia hemisphaerica | exon |
| TCONS_00014187-exon-sc0000183-1575043694:67826..68737 | TCONS_00014187-exon-sc0000183-1575043694:67826..68737 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:67405..68737 + |
Blast
The following BLAST results are available for this feature:
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