TCONS_00014184 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014184
Unique NameTCONS_00014184
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1116

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014184 ID=TCONS_00014184|Name=TCONS_00014184|organism=Clytia hemisphaerica|type=transcript|length=1116bp
GTTTGACCATTCTTGAATGTGGCAAGACAAAGCAGCAATGCATTGGTTTG
TTAGCATGTTGCTATTAGCAACCCTTATTGTGGTATCGGAATCACAAGTA
TGCCGAGACACAGACAGACGATGTCCGACTTGGCGTCCTTATTGCAATTC
AAATGGACATGTTATTAGACATTGTAAGCAAACATGTGGCAGGTGTCCAA
GACCAAGAGCCCAATATACAACAAATGTGCAATGTGCAGATCTATCGAAC
ACCAACTTCTGCAATGGTTGGCGAATGCGTGGGTTTTGTAAAACAAATAG
CTACGTGAGGACCTATTGCATTAAGACATGTGGACTTTGCCCTCAGATGA
GCATGATATTGGAGAAGAGAAGTATGCCGTAGAGAAACATTGGCTTCATC
CAAAATACAAGAAAACGAATTTGCAAATGGAGCATGACATTGCAGTTGTC
AAATTGAAGAAGCCTGTTCAAATGAGCAAAAGTGTTGGTATTGCCTGTCT
ACcaaagaagaatgaaaaagttcCTCGTAACTCTAAATGCTACATAGCCG
GTTGGGGAGTAACTGAAGTTCATGATGGAGTCCATGACGGAAAATCCGAA
ATTTTAATGGATGGACTGTTACGACCGATTTCAAATTCACAATGTTCGCA
AAAAAACCAATTTCTTGGAAAAACTCTTGTCAATGAGAACATGATTTGTG
GTCATTCACCAGAAAAAGAACAGCTTGGAACATGTCAGGGTGATTCTGGT
GGTCCATATGTTTGTTTAACTTCAGCTAAAAGATTTgCTATTCAAGGTGT
TGTCAGCTTCGGCAACGCGGGATGTGATGTTAAAGAACTATATCCGGTGT
TCACCAGAGTCAGCCAATACGTCGATTGGATTCAACAGAAAATTAAAGAA
TAAATCACATTTTATTACTACTATAACTCTTTCCTCAGATCAGAATTAAT
CCGGAATTAATAAAGGCTTTAAACAATATTTTATAGAATGGCATCGAAAA
TACTTGTACTTAAAGATGTAATTACATCGgattctaaaaataaaacacCG
ATGGACCGATTGTAGGAAATGTGTCAACtagaaattcttgattttttatg
aaagatATTCGATGGA
Run BLAST on NCBI

transcript from alignment at sc0000183:36107..52564+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014184 ID=TCONS_00014184|Name=TCONS_00014184|organism=Clytia hemisphaerica|type=transcript|length=16458bp|location=Sequence derived from alignment at sc0000183:36107..52564+ (Clytia hemisphaerica)
GTTTGACCATTCTTGAATGTGGCAAGACAAAGCAGCAATGCATTGGTTTG
TTAGCATGTTGCTATTAGCAACCCTTATTGTGGTATCGGAATCACAAGGT
TACATTTGTTATTATGGGTTGGATTAACTTTTTTCTACGcgttacgtttt
ttggtttgttcatcaattgaattttcaaaaaaggacaGGACTTTTGAAGG
CACAAAAGAAAAGGAACACTTTTCTCGAATGAAATCGCCGTAACATTTAG
AGACGCATGTTGACCTAGGTTGTACGCATTCCCGATAGATAAGTCTTATC
AAATTTATGTAGTGACGATGCAATGAAAACGTTATAAATCGGACTCTCGG
ACGTGAGTTTTATACACGGCACGCATACCCTATATCGAAACATATCAAAG
GGGATGCGTACAGCCTGATACTGTCCATATtgaattttcttctctttctt
ccCATTTTGATAAACTGAAGGCAATTTGGCCTaaatttgtttaaagaaaa
caaaaactgaTGAAGCTCTTGCCTCTGAGATAAGTAGGTTAATCATCAAA
TGAGAAAACAACTAACACACTAAGAAGTTCTGGTTTATTTATCCAGAAGT
TCGCCATTTCGAGGTTTGGTTTATGAGCTTTTTTATAGTATGCCGAGACA
CAGACAGACGATGTCCGACTTGGCGTCCTTATTGCAATTCAAATGGACAT
GTTATTAGACATTGTAAGCAAACATGTGGCAGGTGTCCAAGACCAAGAGG
TACGTGGATTCAACAACTtaatacttttttataaaattttgatacTTAAC
AATCAGCAAgagttttaaaagaaaatttttttgctaccGCAGGGAACCAA
AAGCGAcagaggatggcattcatagcttcccGCCAAATGATAGTTGGACA
AATAGCTCACAATTTTGCGAAAATGTTGTTATACCGCAAGTAGTTCTTAA
GCGCTCCGCGTAGGTTAAACAAACGCGTACGTTAGTATTTTAACATATAA
GAGCatggactgttcttaatttgttcttaggtttaggccaaatttcagca
ttgtatttttataaaattattcttataaaaaagcgtgtaaggcaaggcac
ggatgtcacccTTAGTAGACGCCAAAACGAAATGGGCTTTACTATTGAAA
CTttaactgtaaatcactcccttgacacatttgttagcatttgaagactg
aattttgtctcagatcagATGAGAAGTCAAAAATTACTGTATGGCTAATA
CCATtccttttaaaaacaaatttaactCTATctgttttgctgcggtggca
ctttaatgaaagttatgaCTAGTGTAAAACTTTAATTATTTGTGTTAGAC
TCAAAAAGTCGCATTCTCAAGATATATAAAACAAAGAGAAATGAGGACAG
AATCCTTTGCAGAGTTCCAGCCCTCTAAACATTCAAAcagtatttttcat
ttcatatttCCAGAATTAATAAATTTGAATCAAACACTTTCCTATAAAAA
TTGCATACCGTATTAATTTCTGTTTGCACATTCTAGCCCAATATACAACA
AATGTGCAATGTGCAGATCTATCGAACACCAACTTCTGCAATGGTTGGCG
AATGCGTGGGTTTTGTAAAACAAATAGCTACGTGAGGACCTATTGCATTA
AGACATGTGGACTTTGCCCTCGTGAGTACATTAACTGTTTAAGACTGGAG
TAAGCCTTGAAAAGTCTCCTATAAAGCGAAAATGTTGAGGAAATCTTTTG
CCAGGCTAATTATTTGACAACAACAGTAGGggggattttgttcgattttt
tgaaatcgctcGATagtttgttagaagcacttgttatacatttttggaaa
ctcCAACCTTAgaaaaatcgaaattacgatgcttgcaattttttttcgga
cactttggtgtgattttcggacaaatatgacggtctcaggcaaaaatcat
agggtcaaaaattaatgaaaattttagcttgagaaaacgNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATTTTCATCTATTGTTTGGAATGACA
TTCCGAAAAATTACCATTCTCTGTTTCATTCCAGGACCAGCACCAACAAG
CTCTCGGTGTGCGAATAAACACAATTATTGTGAATCTTGGGCACGTTCGG
GATATTGCACAGATCTCCGAAATGGCCCCTATGTGACGACTCACTGCCCT
AAATCTTGTGGATTATGCCGAGGTGAGCTctttacatttttaggctcaGT
AAATCAGAGGCGTATCAGGGGTGGGTGGAGTACGTCAAGTGACATActtc
aaagaaattgaaaagaacaaaaagtgtgaAGCAGGCTTCCTTATTAGTCC
TTTTCCTTTTTAGTAAATGCAGTCTCCATTAAATCATGTGCCAGTATCCG
CTTGAACTTTACGGGTACAACTAGACAGAAGCACGAACTTAAATTAGGAT
CTTTCTCCGAAGCTTTTACTTTTCTAATGTCTTCCGGCGATTGAAGCGAC
TATATTCTTCCATCTCAATAATTTTAGTAAAGCCAAAACCACGCCCACAG
CCACGACCGAAACCAcaagtaaaaaatacacgtAAGTAAGAAGAGCACTC
GCTCCGTTTTTACATCATACTTATGAAGCCGATTTCATAGAGGCCAGTCT
CTTCAACGCCGGAGTGCCAAAAATGATAGGGCAAGATAATGGAAAGAAGT
GTTCacatttgaaatcttttttatcaCTACGGAattatcattgaaatttt
gaatcaaCTGATTGAATACTTAATGAGCGGTGCTATCTTAATATATCAGT
TGTTATGTTTAAATGTATATTTGAATTTCAGCCAAGCCGAAAACACAACC
TCCAAAACCGAAAACACAACCTCCAAAACCGAAGCCCAAACCAACACAAT
CAATTTGTATGTCAAGTTTTGAACATTCTAAGATTTtgtatatttctttt
tcaaaatggaaagTTTTTCATAAGGGCTCTAAGCAAGAgtgaattttcaa
tattttccaaAAGCCAAACTAACTTTCTGTCTCATCAAGCCAGCTTGAAT
TGTGACGTGTTATTGTTTCCATTCTCCATAACAGTTGGAACATGTGGAGT
CAACAAATTGAGCAAACAAATCTCCAGTTTCGTTGTATCAGGCTCGAAAT
CAGAGCGAGGCAAATGGCCTTGGTTAGCTGGTCTTTATGCATGGGGCGAA
CATAAATGTGGGAGCACTCTGATTCATCCACAATATGCTATCACTGCGGC
TCAttgtatttttgatgaaaacagAGGATCAGAAATACCAGCAACAAACT
TGGATGTCCACGTAAATGATTTTATAAGGTAAGAAATTATAAATGTTGGG
ATTTCGAGGATTTGAAATTGCAGCACCATTATTTCAATAGAGTCAATGTA
GGTTTGTAAGGACTAGAGGTTTAAACATAAATGGGATGAACGATGTACAA
TTAGTCAATAGTTTGGtagttttaaataaaaaaagtagtatGTGACAATT
TTGAAATCTGATTGTAAGCGAATAGAATCTTTTTCTTTGCTAAACTAAAG
TTTGAAATTCTACGTAACCTCAAGCAGAACTCTTGGTTGGTTTTTATGTG
CAAGAAATACTGGTTAAAGCATGTGGCCGAATTAATACTGGTTAAAACAT
TGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATACAAAtcccta
caagtttctgaaaaatagaaaagcgagcgaagcgagcgtattaaaaggag
taagaagtcgtctcggacgacgccgggacggctagttgTATATAAAGTGA
CAGTGAATTCTCACTTTGACTTAGAGATGAGCATGATATTGGAGAAGAGA
AGTATGCCGTAGAGAAACATTGGCTTCATCCAAAATACAAGAAAACGAAT
TTGCAAATGGAGCATGACATTGCAGTTGTCAAATTGAAGAAGCCTGTTCA
AATGAGCAAAAGTGTTGGTATTGCCTGTCTACcaaagaagaatgaaaaag
ttcCTCGTAACTCTAAATGCTACATAGCCGGTAAGAAATTTTAATATACT
AGAACAAAATGATGGATACATaacattttacattttaaaataaTGCCTCG
ATTTTCACCACATTTTTAGGCGTTGGAATCTagtgctttctttgttttta
cgtaagacatttttcaaaatctgacgGTAAATGATCAATCAAAGCATGAA
TAATCACATCAAACACGTGACTTCAAATCGTTCGTAAGGGATCCGGCTTT
AGTCTTTAACTACAAATCATTGGCATAACATCTTCTTTATGGGAATCATC
TATAGTATTAATATTTCTGTTTTACCAGGTTGGGGAGTAACTGAAGTTCA
TGATGGAGTCCATGACGGAAAATCCGAAATTTTAATGGATGGACTGTTAC
GACCGATTTCAAATTCACAATGTTCGCAAAAAAACCAATTTCTTGGAAAA
ACTCTTGTCAATGAGAACATGATTTGTGGTCATTCACCAGAAAAAGAACA
GCTTGGAACATGTCAGGGTGATTCTGGTGGTCCATATGTTTGTTTAACTT
CAGCTAAAAGATTTGTAAGTGTTTGTAACCTCTTAcaagttttttatttc
aaattgcgAAGAGCATTTATCACTAAGACCATTTGAAACTTAAAAACAGT
CAAGCAATATATTTCGGTGGTATCACCATTctctaacctgagatcagatt
gtgattgttttctgcacaccacgctgaagctctaaagggatgtgtgaaaa
caaacaatctgacgaataggcaatctcgaaatcgtaaggaccgcgttcat
ctaaaaggactaggaacgacaacaaagttgcgtgattgtgtttatgaata
gggcaccgtatcagtttttgacttttcaacgcacaacaagattcttgttg
tagaattttcggcgggaggactatttttctcagatgtataattttcaagc
gccttcagagatTTGCCGTGCGCgtcagaaaattatgaacagctgttatc
aggttaccatTCTCAAGCTTATAAAAATACAAGTGTTCTATCAGATTACC
GATTACCGTCCAGGGGAATTTAAGCTTGACCCAAAATCGGCGTACACatg
gaatttttttattgaaatgcgTTCATTGGGTCCTTAGGATCAAAAAACCG
TCGAGTACCATCAAGCACATCTTgagcattttccataatggcggagattt
caaaatggcggatttaatttttttttttatttgatgttttcaaacatagg
catattatataccgttggaaagaatTTTTCATGCTGAACAACTTCTTTGG
CtacaaaaaagtctaaaaatgtaCTGAACTTAAACTTTTTTTACGTGCCT
CTAGTGCCCTAGTGCCTCAAAACTATGCTAGATACGCTTCGTATTATCTA
TTGAACATGGAGAGCTTACCGAAGAAGATTCTTCAAAGGTTTATGAAAGG
GGAGCACGTCATGAGGCATAAAGAGGGGTTTTGGAACGGTATATGGTTAG
ACATGTTCATTGAAACCACGTTCATGCGATGCCGATATGGAAAGGTTCCA
GGCGGAATCATTGGTGTCACGCTCAAGCCGACCGTGGTCAAGAAGTGGGC
AAACAGTCTGCATATAAAAACCCAAATCTTGGCAGACCTTGATGACATGA
GAGAGAGATCAAGaccaaaatctaaaaaattttcacaaGGAGGAATCCAA
AGGAAGAATCAAAAGTGACGAGACCGACCGATGTTGAGGATGGACAAGAC
CAACGAAATGAATTTATAAAGAGCTTACCAGAGGGATTCCACGATAAACT
ATCCAGCAAAACAATCACCATGAAATCAGGAAAGGAATCTGTGGTTACTG
GAGAAAGcgaaattttcaacactgagGTGNATGAAATCAGGAAAGAAATC
TGTGGTTACTGGAGAAAgcaaaattttcaacactgagGTAATCTATTCAT
GCGTTATGTGTTTATTGAGTATTGGCAGAGTCAAGTTAGAGGAAGTCCTG
AGGTTCGAGCTATCACCCATCCCTCTATCAATCTTTCAAAAGAATGGGGA
GATGAGACCCCCTAACGGTAAATCGCAATTAAAAGAAGCTCTCAAAGTTA
CAACGTCTCAAAGAAACCAAATGAAGCCAGAGGTCATCATTGTGGATGGT
TGCGCAAAATTTTGGGATATCCAGTTGGCCAAAGGATGGTACCGTCAGAG
GTCTGGCTTACAAAATGTACACGTACATTTATAAGTTATTATCAACTATC
ACAGGAAAATACAGACGTATTTCTCGCTTTTGATCGATAGTTTAAGTATT
CAATTAAAGGTGTAACCAGGGAAGAAAGGACAGGAAGCATTTCGCACAAC
CATATTTTGCACCACTCCCAGAAAGAGAAGTTGTCATGACATCATCGCAC
AACAAAATTCAAGTAATCGATGTTGTCTCAAAGTATGTAGTTGATATACT
CACTGTCAATCGTTTCGAAAATAGACTTGTCGTGACATTCTCAGATGCAA
CACCAATACAAGTTGAAAACGTCGTCGTCACACCACGGGAGGATTTGAGA
AGTCAACATGAGGAAGCGGACGTCAACATCATCAAGCAGTTAATGAAATG
CACAGAGGAAGAAAAATCACCCATAAAAGTCGTCTCTGATGATACTGATG
TCTTCGTTCTTCTAGCGTCTTATGTGCACAAGTACGCAGTGAAAGCAAAA
ATTCTAATGAAATCCTTTTCGAATAGTCGCGCACTTATTAACATCAATCA
AACAGCAAAGAAACATGCTGACATCATGTCTTCACTAATTGCTGCACACG
CCCTTTCAGGATGCGATAGTGTTTCGAAAATGCACCGCATCGGAAAGAAA
ACGTTCAAAAACGTGTTAAAAAAAGGATCGATCCTTCAAGGAAACACCAA
ATTTGTTGCTGCCTGCTACAGAATAAAGCTAGACGAACCCAGTTTATCAA
CGTCTAGATTTTACATCTCTAAAACCACCAACATTGGAATCCCTACCACC
AACAACCGAGGTCTTTCGCTTGAATGTGTTGCAAGCTCATTTCCAGGCCT
GTATTTGGAACAGCTGCCTTAATGAAAGACCACCAGAAATGGATCCAACC
AAAGTATTTAATTGTTTCAGTTTGAATTTAAACAGTTGAATCTAAATTTG
GATGTTAAGTTCTTTTATCTCGTATCTTTGTTTACTGTCATTTATCATAT
CATTACTTCTACGAAATGATATTCAAAATCTTCGACAAAATCTTCCTTAC
CCCATAGTATGGATGGACCAAAGATGATGTCAATAAGTGCTAATTGCCGA
GAATGTTCCTAGAAAACGGGTCTGCTGCCCCTGATGCAGTCCTTGAGATG
ATTAAGTGTAATTGTGTCTGTGAATCTTCTTGTTCAAGATAGAACTGTAC
ATGTGCCAGTGCAAAATTATCTTGTAACAAATTTTGCAAATGTTATGACA
GTGGAAATGTGCTGCAATGAATGGACGGATAAGGACAATAATAGTTTAAG
TGATTACGAAGCAGAAAACGGGAATGAGCAAATGAACGGCGTTGAAGAAT
GATAATGCTATTatgatattttaaaattatttttttctttgagaaaaatc
tCTGAATGCAGTATTCAACACCAATGAAATACCAGCATGAAATACCAACG
GTAATAATAATTGATGGCTTAGAGGAGAAAAGACACATGTCtgaaaatga
tgacatcatctaCCTGACTTTGGACGCTTCTTACATGCATTCGGTGCATT
TTCAGTAACATGTAACACCTCATAGTTTTAAGGGAAACAAGATTCGcaca
aatgcgactaaatatttcccccttacacttgcagatggactcattgagtt
taaagcccgaagggctagagttcaatctctaacctNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGATCCCTGAAAGTCACTTTTAAAGCTGTCTGACTGTCTG
AAAAATAACCAGAGAGAAAGTTTCCAATTCCGTCGAGTTGACAACCAAAA
CAGTCCAGAACATGTACCACATGGTGAGTTAAATTTCCTCAATAAAAATT
GCACATTGATTAATCCTGACTAAAGGTTTTACACTATAGACAAGAGTTCC
GCCTCACTGCACAAATCGATCGGGAGAGGCGTGGGCGTTATTAAAGGGGC
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGGCGGAGTGATCGAGATAAAAATATC
ACGTGACTTTTGacgggaaaaaaatcaaaacaaacttatgtgGTGGAAGG
CACAAAAAATTATCTTCCTTTCTCTCAGAAAAAAGCTATCATTTTGTTTC
AGCTGaaggtaacctgataacagctgttcataattttcttacgtgcacgg
taaacctctgcaaaggcacttgaaaattatacatctgaggaaaatagtcc
tcccgtggaaaatttcacaacaagaatcttgttgtgcgccagaaagtcaa
aaactgatacggcgccctattcataaacacaatcacgcaactttgttgtc
atccccagtccttatctagacgaacgcggtctttacgatttcgagattgc
atttTCGTCAGATCgtatgttttcacccagtgGGTTCGACTGACAGTTCC
TGCATTAAAAGCCAAGATGCAATATGTTTATTAAATACACGCTCACAGTA
TCTCTAGTCAGAGAAAACAAATCACACATTCAAAAGTGTCTTTAGtcagg
aaaacaaccaaaacacgtaccaaaacaatcacacaagtttcaaaagttta
gaaaatccacaaaacctctgacctcatgaatgtaagaaccaagaattaaa
gactttgttttggggTCACTCGGTAAACAAATCTCATATGTCCCAGAGAC
ATTGTCCATATAAAAGTTtgtatttcaaagcaaaaatatttctcgtactg
cccatttttctcatcaattcttcaacttgaaccagtttcacatctcaata
gaatgttaataccattttgccaatcatttaatgtctaaagttatggggat
gtagcgttttcttcatgtcaagcaaatgtctctgaaatattggttggttt
ggtattcGGAAGAGGTAATCCATggatatctttgtaatcaatgatgaaaa
actcttgaaattaCTGATGATTACAGTTGAAGTGTTAGCCTCGCATTTCA
TGTAATTATTGGTCGCCAATTAGATGaaaattgtatgttttttgttcgtc
agaaaagagttataacttttaaaaagcCAAGAGTGAATTTTCGTCCATCT
TGTATTTTGATCTGAATTATTTGTGTCTTGATTACTCAAAAACATGCGCG
TAACATCAAGGTAAATCCGTGCGATTTTGTCTGAATAACTaaggcaaatg
aaaacaaaaacaaacttcgcaATGTGGTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGCCGCCCCCTTtaagggcgcaaaaagggcgtaagtagccaa
ggatcggagaaatgcctttttaactaatatttccccttatagcggggaaa
tattcaaaaataacGTGTTCGAACAATGATGACATCACCTACGTGGCATC
GGACGCTTATTACTCACATTCAGtacatttttagacttttttgtttgcaa
aaaagttgttcatcatgaaaaatcctttccaacggtatataatatgctta
tgtttgaaaacatcaaatttttgaaaaactttaaatCCGCCATTTTAATT
ATANTATGCTTATGtttgaaaacatcaaatttttgaaaaattttaaatcc
gccattttaattatctgccattatggaaaacGCTCAAGGTGTGCTTGGTG
GAGCTCGACGGTTTTTTGATCCTAAGGACCCAATGAAcgcatttcaatca
aaaaattccatGTGTACGCATATTTTGGGTTCCCTCAAAAAAGGCAGAAA
TTCCCCCGAgaaaaatgcatgaaatatCTACGTGActccatttctaaaaa
gttgtAATTTTGATGAatctaattggtcattaagTCCAGGTTTCTTGAGA
GCAATAAAAGATGCTTCAAGATTTTTACGAGTTCTCCAATTCTTTGGGGC
ATTGAGGacaattttccattgaaatTTGTGATTTGGGTAGGAATTTAAAT
GTTTTGCAGGCTCTGATTTTAAAGTGACATCTTCGTGCTCtccctagcct
ggatatccaagctcaaaattttagaaaaaacaatatttacctcaacatac
aaagttctaaaattatagagcttggtctccctagagaatgaaagtgcaaa
cccatgtttccaaaactttactggccaacccagggcagcaaaacagaaat
taataaaaagcagccttacaagatctaaaaccatttaaaacatccaaaga
ttacaccagattccatgaacaagtttgcatgcattatcatgaccaaccat
gttttcttgaaaaatgaacttgcttctgttttcttctttttcatgttttc
atgtaacagaaagttCTGTCTTCACTTTAGCAAGTGGAGGACTGTCCTAT
TTTTGCTTCGGAATTGCTccgcgccgtgtagattggtccttacggcttta
gcgaagtgagcgcaagcaagcggactacATTCTTATATGGAGAATGCaaa
acgctctagggagaccaggctgtaaaccaaaacataaaatataaaaaact
agactgtgaaatagtttacaccctggatatccaggctatgctCTCCCCAT
CTTGTAGCGACGTTTCGTTTAGCTTCAGCAATGTAAATTTGACCACAAAA
ACAATTACCTTGGTAAATTTTGCAAGCTGGGTACGGGTTCTTGTCTTTTA
AAGCGAGTAAAGATTTCACCTTTCTCGTTGACCATTtgataataaaatca
aaagtatTATTCGTAAAAAACTTCAATTTCTctaaggcgaggccaattta
attggttgttttacgggccaagctacccaaaaagagGGCCGGTCGGTcgg
ccaaaaaataaaaataaaagtagaatttcatctataaaatctcctaaaaa
ggtaGTGAAATCTtgacaaaaaatgcaaaatagaaaataaaaaggtaCAG
AAAGTCTGAATTTATGgataaattgaaagaattgaacattaaattctcaa
aaccttgcaaaaacaaccaaaatttggtatactgtaaagcaatgaaaata
aaaatgtacagacaaaatcaattttatttttatttcgatttttggaattt
cacggtcggtcgggcccgtaaaactaatcaaattggtctcgcctagtAAG
TGTTTCACTATTATTTCGTTTTTCTCGCAAAACGGTACTTCAATCAAAAT
TCTTCTCTTTGGGACctcaaaaagaaaatcagaaaTAAGAGGATACTCAT
CAGAAGAATtaactttttcttcaaattgatTAATTACACTATCAATAAAA
CGTGTATAGGAAAAGCTGCTTTTTGAAACTTGGAACGAACAGCTTGTTTT
TCTGCTTCAAAGTCAATGGATATTTTGTGGGAGCGATAcaagtctccatt
tatggcaTTGCGTTTGTAGAGTTTTGGCACTCTAGATGTCCAGTGGTTTG
GTACTTTATTTGGTTAACGACTTCTTTGTtattgttgaatttttttagaT
GTGGATAGAAATTTGTGTAATCTGATAGAACACTTGTATTTTTATAAGCT
TGAGAATGGTGATACCACCGAAATATATTGCTTGATTGCttttaaatttc
aaactttgaaaaatggcttcaaattataacattaagaccatgttcagacg
ttacggtttcgtatcgcTCCGGTGCGGTCTTTCTTACGAATAGGAAGTGT
TCATACtcatttcggaacgtttcggagcaagaaaatgAGCAGTTCAGTTc
tagtggagcgaaaccgtttcgatctgttttgctttgtaacgtcttctttt
ttgacgtttcaaattttgacgctCACACAGTGTTCCGGAATCGTTTCGTT
TCGTAATCTTTTGTACCATATTGAGCAGGGCCTGACTGAAATAGAGACAC
CAAAACGACGGTGAGATGAGATGAGATGAACAACATCTGAATATTATATA
TTGATGattcatttttttacaattttaggCTATTCAAGGTGTTGTCAGCT
TCGGCAACGCGGGATGTGATGTTAAAGAACTATATCCGGTGTTCACCAGA
GTCAGCCAATACGTCGATTGGATTCAACAGAAAATTAAAGAATAAATCAC
ATTTTATTACTACTATAACTCTTTCCTCAGATCAGAATTAATCCGGAATT
AATAAAGGCTTTAAACAATATTTTATAGAATGGCATCGAAAATACTTGTA
CTTAAAGATGTAATTACATCGgattctaaaaataaaacacCGATGGACCG
ATTGTAGGAAATGTGTCAACtagaaattcttgattttttatgaaagatAT
TCGATGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007939XLOC_007939Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014184-exon-sc0000183-1491911889:36107..36204TCONS_00014184-exon-sc0000183-1491911889:36107..36204Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1510915933:36107..36204TCONS_00014184-exon-sc0000183-1510915933:36107..36204Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1575043694:36107..36204TCONS_00014184-exon-sc0000183-1575043694:36107..36204Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1491911889:36745..36855TCONS_00014184-exon-sc0000183-1491911889:36745..36855Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1510915933:36745..36855TCONS_00014184-exon-sc0000183-1510915933:36745..36855Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1575043694:36745..36855TCONS_00014184-exon-sc0000183-1575043694:36745..36855Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1491911889:37643..37777TCONS_00014184-exon-sc0000183-1491911889:37643..37777Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1510915933:37643..37777TCONS_00014184-exon-sc0000183-1510915933:37643..37777Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1575043694:37643..37777TCONS_00014184-exon-sc0000183-1575043694:37643..37777Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1491911889:41281..41486TCONS_00014184-exon-sc0000183-1491911889:41281..41486Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1510915933:41281..41486TCONS_00014184-exon-sc0000183-1510915933:41281..41486Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1575043694:41281..41486TCONS_00014184-exon-sc0000183-1575043694:41281..41486Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1491911889:41785..42020TCONS_00014184-exon-sc0000183-1491911889:41785..42020Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1510915933:41785..42020TCONS_00014184-exon-sc0000183-1510915933:41785..42020Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1575043694:41785..42020TCONS_00014184-exon-sc0000183-1575043694:41785..42020Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1491911889:52235..52564TCONS_00014184-exon-sc0000183-1491911889:52235..52564Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1510915933:52235..52564TCONS_00014184-exon-sc0000183-1510915933:52235..52564Clytia hemisphaericaexon
TCONS_00014184-exon-sc0000183-1575043694:52235..52564TCONS_00014184-exon-sc0000183-1575043694:52235..52564Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000183supercontigsc0000183:36107..52564 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.0659237	0.0816572	0.237775	0.104203	0.052029	0	0.0149957	0.0953435	0.395991	0.662134	0	0	1.00758	0.916118	4.19445	3.10239	0	0	1.33154	0.803985	0.344093	0
Blast
[Close]
BLAST of TCONS_00014184 vs. Swiss-Prot (Human)
Match: CEL2A (Chymotrypsin-like elastase family member 2A OS=Homo sapiens GN=CELA2A PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.004e-27
Identity = 71/219 (32.42%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  268 LANAWVL*-------NK*LREDLLH*DMWTLPSDEHDIGEEKYAVEKHWLHPKYKKTNLQMEHDIAVVKLKKPVQMSKSVGIACLPKKNEKVPRNSKCYIAGWGVTEVHDGVHDGKSEILMDGLLRPISNSQCSQKNQFLGKTLVNENMICGHSPEKEQLGTCQGDSGGPYVCLTSAKRFAIQGVVSFGN-AGCDVKELYPVFTRVSQYVDWIQQKIKE 900
            +AN+WVL        ++  R  L   +++   S    +   K  V K W   +  K N     DIA++KL  PV ++  + +ACLP     +P N  CY+ GWG  + +  V D    +L  G L  +  + CS    +   + V  +MIC        + +C GDSGGP  C  S  R+ + G+VSFG+  GC+      VFTRVS Y+DWI   I  
Sbjct:   63 IANSWVLTAAHCISSSRTYRVGLGRHNLYVAESGSLAVSVSKIVVHKDWNSNQISKGN-----DIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAVPD----VLQQGRLLVVDYATCSSSAWW--GSSVKTSMICAGG--DGVISSCNGDSGGPLNCQASDGRWQVHGIVSFGSRLGCNYYHKPSVFTRVSNYIDWINSVIAN 268
The following BLAST results are available for this feature:
BLAST of TCONS_00014184 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CEL2A2.004e-2732.42Chymotrypsin-like elastase family member 2A OS=Hom... [more]
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