TCONS_00014046 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014046
Unique NameTCONS_00014046
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1427

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014046 ID=TCONS_00014046|Name=TCONS_00014046|organism=Clytia hemisphaerica|type=transcript|length=1427bp
CTTGATTACATTGCTTCTGCGTTAAAAGTGTTCCAGTTGAGTCAGCTATA
ACCTCAGATCGGAGGAATACGGGGCTTGACAAACAAACACTTTGTGAGAT
TTGAAAATCTCACTTCAACTTTGAAGATCTTTCCTTCTCTCTGAGAAGAT
TAATGAATATGAATAGTCCTCAGGGTGGAAAACTCGTTGGGCTTTTCGCC
ATTTTTATTTTGCTTGCTGTTAATTTGACCGGATTACACGGGCAAGAGGA
AGACCTACTATGCATACAACCTATCGATCTGGTATTCGCATTAGAGAGTT
CTGGTCGAATTGCAGAACACCATGAAACAATCAAATCATTCACCGAGAAC
ATTATCAATACTTTTGATATCGGTGCCCGTAAAACACACGTTAGTGTAGT
CACATTCGGTGATTTCGCGGACTTGCAGATCAAATTGACCGACAATTATG
ACAAGAACAACCTCATCAGAAAGgtcGAAAACCTGGTTCACCAAGGATCA
GGTGGTACCgcaaccgatgacgtcatccgTGTGTTACGTGATAGCGTGTT
CTCACCTTACGGACAATCACGTCAAGGCGTTGTCAAAGTTGTGATCTTAC
TCACGAACGGGAAATGTACATCTTGTACTGAAGAAATTTCCACTTTGGTC
AATCCTTTAAAAGATATGGGAATTGCTTTTTTCACTGTTGGTGTCACCGA
GAATATCGATTCTGATGAACTAAAAGCTATTGCTTCAGAACCCTACGAAC
ATTATGGTTTTGAGGTCTTTGATTTTGGAGGATTGAGTCGAATCATCAGC
TCAGTTGCAAGTAAAGTTTGCTCAGTAAACCGTGGCAAATGCAGTAAACC
AACACCACCATACGGCTGTGCAGGAGCAGGTCGAGATGAATGCAACTTTG
ATGGTGACTGTGTAAGGGCCACGAAATGTTGCTTTGATGGATGTGAACGT
AAATGCAGCTACCCTATCGCTAGTTCTTTCACACCGATGGACAtcgcttt
cgctttcgattCATCCAACAATGTGCAATCAAAGACTTTTGAACAAATGA
AACAATTCGCAATCAACATGGTCAAATCGTTCCACGTGTCACCTTATGAT
ACTCGATTCGCCTCGCTTACTTTCAGTGACGAATCCAGCGTTGATTTCAA
CTTCGCACAATATGACCTTACTGCAGATATTATCCAAGCTATCACACGTA
TCGGCCATCGACAAACAGACATTGATCTGGCAGCTgcattgaaaatgttg
aaatctGACATTTTCAGCCTTCACGGACAAGTTCGAACAACAAGACCAAT
GGTGTTAGTTCTCTTCTATGACGGGAATGATTCGAAGATTACTTCAAAAG
ATCTTCACGAGGCGGTCACTGAATTGAAAGATTATGGCGTCAAGATAGTC
AATGTCGGAGTTGGGGCACAggtaaaa
Run BLAST on NCBI

protein sequence of TCONS_00014046-protein

>TCONS_00014046-protein ID=TCONS_00014046-protein|Name=TCONS_00014046-protein|organism=Clytia hemisphaerica|type=polypeptide|length=425bp
MNMNSPQGGKLVGLFAIFILLAVNLTGLHGQEEDLLCIQPIDLVFALESS
GRIAEHHETIKSFTENIINTFDIGARKTHVSVVTFGDFADLQIKLTDNYD
KNNLIRKVENLVHQGSGGTATDDVIRVLRDSVFSPYGQSRQGVVKVVILL
TNGKCTSCTEEISTLVNPLKDMGIAFFTVGVTENIDSDELKAIASEPYEH
YGFEVFDFGGLSRIISSVASKVCSVNRGKCSKPTPPYGCAGAGRDECNFD
GDCVRATKCCFDGCERKCSYPIASSFTPMDIAFAFDSSNNVQSKTFEQMK
QFAINMVKSFHVSPYDTRFASLTFSDESSVDFNFAQYDLTADIIQAITRI
GHRQTDIDLAAALKMLKSDIFSLHGQVRTTRPMVLVLFYDGNDSKITSKD
LHEAVTELKDYGVKIVNVGVGAQVK
Run BLAST on NCBI

transcript from alignment at sc0000180:341516..352225+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014046 ID=TCONS_00014046|Name=TCONS_00014046|organism=Clytia hemisphaerica|type=transcript|length=10710bp|location=Sequence derived from alignment at sc0000180:341516..352225+ (Clytia hemisphaerica)
CTTGATTACATTGCTTCTGCGTTAAAAGTGTTCCAGTTGAGTCAGCTATA
ACCTCAGATCGGAGGAATACGGGGCTTGACAAACAAACACTTTGTGAGAT
TTGAAAATCTCACTTCAACTTTGAAGATCTTTCCTTCTCTCTGAGAAGAT
TAATGAATATGAATAGTCCTCAGGGTGGAAAACTCGTTGGGCTTTTCGCC
ATTTTTATTTTGCTTGCTGTTAATTTGACCGGATTACACGGGCAAGAGGA
AGGTATGTAAATTTTACTTTATTAGTCCAGGCATTTTGGGGCACTAACCC
TACTTTGTCACTGAAAAAGGTCTTCAACTTTttgtactcttgtctcccga
atagacgccccccgctaattgttaataaaaaaaatccacCCACCCgatct
tattaagaccccctgTAATTAATTTCGagtaattcaatattttattacag
tgtagaaagaccttaaacttgtgaaaattttcctttccgttagtattggt
tcttctGAGATTCCAATTATTATCAGGCTAATCTGAAGAATGAATTTTCC
AGTCTTATAGTTTTTCCTTATCTTTCCACCACATATGGGGTTTATATTAT
ACGGTCTTTTAATAAAGTTTCTTATCGTGTTTACGAATTTTCTACCTGTC
GAATTAAGAAATTTAGTAGGCCTTtttattataaattattttgagtgcaa
caaCTGCCTCGCTTATAAATCATTACAAAGGTTATTATTAGATCCCTATT
TTGAATCTTCCTGTGTAACTTTTATAAATGGAGTAAATATcttatcaata
ttttgaaaacgaggttaccgttgctcgtgacgtaatttaggaaaaggtct
attcagtTCTCATCAGTAAAAATTTTGTCATAAAGACCTTGAATGAATAT
ATTTTGACAGCCATCTTGTCGTCTATAGCAAAATTCGGTTCGGTATCACA
CATATTCTTTTCCCAGTTTTAAGCTCTATTTCGTCATGTTTGACAAGGAA
ATTTGGCAAATATCAtgatacccctgtgtcacagacccgctgggacccca
gccccactggaaagattgacaaaaatttcgtctcccgtgggaaaatacct
tagaaTTTCAGCCACActtaaaaatcaacttttatttcatccccattcga
aattcaatgttgccactgaattttttattattcttggaacaaaggaattt
ctataaccattggaatttcaaaaggaatttttatccccactgagcaAAAA
AGTTCCAACGGGGCTGTGAAACACGGGTGTATATGATACataaaaatatc
agaaaaattcCACACAAAATCCATCAAACTTGGATTGTTGGATTCATTtc
attctgcaaaatttcaaatactGAATAATAAAGGCTAACGATGAAATTCT
AACGATAAAGCTATATACAAACAAGGATGTTGAAATTTTATCAACCTTGG
GGTTATTTCTGTAAACCACAAACTTTAATCCAGCTGTCATTCCTCAATAA
ACCACAGTCTTTAGCCTATTTCACTCCAGAGAAACTACAACCTCCTGATC
TCTTCTTTCCTCTCTTCATTCCTCTCATTCAATTGGTTGTAGACTACCCC
CGGGGGTACTAGTGTTGGTAAATGAGGGGTATCTGCGGACGAGACCTCTG
AAAACCaccccttagagagacttttttgaaaaattttcctcgatttttga
caaaagttctacccttagagagacttttttataatttttttctctcgaaa
tcaaaaatatgtcctgaaaatcatgaattttccgacccttagaaagATTA
ATTTAAAACTGTctgatttttacgacccttagagagactatgaaaggtga
aaaaaccgacccttaccgtccgcacatacccagcacccatttttacCTAA
GTACTCCTCCCTCGGGTGACTACCCTGGTTCGCATTAGATTCGTCTTCAG
TTTTTTCCCAAATATTAAGAGAACTGTTTTGAAACCCCAAATATTCTATG
AAAGAAAGTCTTTTTGCATACGTATCCAACTATTTTAATGTCTGCTAGCT
GCCCCGAAGTTCAACAGTTTTTACCAAAAGCTACACCATATAATGAAGAA
TTCAAAGCGCacccaaaaaaatttcaaaatgaaatcatCCAGTAAAGAGT
ATTTCCTCGCCAATGATTTTATAGTCTGATTCTATGAGGGGGGTTTCGGC
TCATAATTCGGTTGAAAACAAGAAGTCGTGGTTGGGGGCGCCGTCTTTCG
AAGGATGTCGTGGTTGGGGGCGCCGACTCTCGACAGTCGTCGTGGGTGGA
AGCGGCGTCCTTCGAAGGTCGTCGTGGGACAGGTGGTCGTGGCACAGGAT
TTCGTGGGAGCctctctttcaattttttctggtcttctatttctcaatat
tttctagctggtccttaaaatatcacttaataTACCCACGCCGCCCTTCG
AGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCCACCCATCC
AAATTGTGAAGAGATTGAAATTCTAGCCTTCGGGCTTATACCTCAATTGG
TTAAACATACCTTacaggaagaaatttttttgtccAATATTTGTAAACTT
ATTTTGCAGTGATTGAACTGACTCATCGTAGTATACACTATAGGAAGCTG
TaggtttttttcaggttttcctaATTCTTTATCAAACACGAGAAAATGGC
ACAAGGTTTTAGGAAAAATTAGCCAAtttaatttggaaatacttagtTAT
CTCAAACTTCTGATTAAACTATAAATATTTGCATCAGATTGATGGAGGCT
TGAACATTGGCCAGGATGCTTTCTTTGTCAAGGTTCATTTTTAACACACT
ATATCTATCTGtctatgcaaaaaaaagaaagaaagaaaaataagcatatA
AGTTTTACTGTTGATTTCATGTTGTTtctttacaggcctttttttagtta
GCCTCTAAAGATTTAGATTTAGGCGTagtggtgtagtggttatcgtgctt
gacttctgtccaggaggctcgagttcgatacccaccgtggcactacgatt
cacttggcaagtgaatgttcCTTCGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNccatggctcggcagctcgcat
ctgcagggttgcaatgtctgcttgcgctgtgattcctactccaccgtggg
taggacccattccgatccatcggagggcatatctatctatctatctaaag
ATTTAGACTTTAGCCTCCAACCCAGTAACGGACTGTTCGccgtccccaac
cacgactctcgaaggtcgccgcactGTTCGCCGCCCCTAACCATgactct
cgaaggtcgccggACTGTTCAccgtccccaaccacgactctcgaaggtca
ccgcactgttcgccgtccccaaccacgactctcgaaggtcgccggACTGT
TCGCCGTCCCCAACCACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCACTGTTCGGTG
GCTCTCGAAGGGCGGCGTGGGTAtattaagtgatattttaaggaccagct
agaaaatattgagaaatagaagaccagaaaaaaattgaaagagagGCTCC
CACGAAATCCTGTGCCACGACCACCTGTCCCACGACGACCTTCGAAGGAC
GCCGCTTCCACCCACGACGACTCTCGAGAGTCGGCGCCCCCAACCACGAC
ATCCTTCGAAAGACGGCGCCCCCAACCACGACTTCTTGTTTTCAACCGAA
TTATGAGCCGAAACCCCCTCATATGATTCTCTACTCACTTCTCTACTCTA
TTTATTGAATTAAAACCAATTAAACTATGTTGAAAATTATTCTAACTGTc
aaaaccaatgaagtataagcctgaACGGCTAGAattgaatctccttggta
ggatttgaagcctagCGCAGCCCGCCTGATTTTTCCACAAATGACaaaaa
tatcactcgaaaacaaaggatttggtagattcaatctgtcgtcaaaaata
cggcgcatatttcaaggcttcactttttcttgcacgagaaaggttaaaga
ttcgattctagcccttcaggcttatacttcattgatcaAAACATAAAAGN
TGAGCaaggttaaagattcgattctagcccttcaggcttatcTTCATTGA
TCAAAACATAAAAGTCAATGAAATTCTCGCGGCAAAACTTTCACCTCGTC
AATTTTCAACACTTCTAAAGTTGATACCATTCTCCAACAAGACTCTTTGC
CAAACAAATAAACATTATCGATGCGGAAACGTTTTTCACACATGCTTTTC
GAGATTACACTTCCAGACGTTTAAAGTATCAAAGCTTTTAACCTTTAACA
TATCAAAGATTTAACAAGGGCTTTCCTCTGAGATCTAATAATTTTTAAAG
GAATTTAATAcagtaaaactatttgaaataTTGGGCGAGCTCTTTTTTAG
AGAAAGTTTAAACCGATTTTCGTATATAAAACCTCATGTAATCGCCTCAT
GACAAAGGTGATTTTCACCCTTTATAAACCGTCccataaaggtttaaaaa
attgTCACATTCTTTTACCGCTTTTCTCCTTCATGTCTCGAAAATAATCG
TCTTCGCTTTTGTCGGTCAATTTTAGTAATACACCATTTTACAATCATTC
AAAAATGATCNATCTTCGCTTTTATGTCGGTCAATCTTTGAAATACACCA
TTTACAATCATTTAAAATTATCCCATTGTATACTAAGTATACACATGTAT
ACTAAGTGGataaagagggtaacttatttcttTCACACCCGGAAAAGGTG
GTGATTAAATTTGGTGGTTTTAAAAGcataattatatggttgattacatt
tagcttagatttgtaaaggacgagcggggcgataaaaccgtaatagcccc
gcttttttgtattcgccctgatgtaaacaaaaatttctattggttgaaag
aaaagtatcgtccgatattttgattggttaacaaaatatcgtacgaaatt
tttaGGCCAATCAAAATAAGCGATTAGCgaatagcgattgagtgttcttc
aattctttttttgaccatataattaacgcggaataacatggtttctcggg
tgattttggattaataaccctctaaaccatgttattactagtagtACAAA
TAGGCCAATTTAAGTACCcctaagatttttttaaatctgcaCTCCCCATA
TCCAATACCTGTCAGCGATTGCGCTTGATTATTGGAGGCAAAAAGACTTA
CGATTTATAAAGAGGCGTGTGAATATCAATCAAATGTTTGATAACTACCA
GCCATATCTCTTCGAAATTTATGAATGTTAAGCCTTTACCTCTGAGAAAA
CATACTAGAATTTCTTTTCATGTTATGGTCTTTTTGCCTCCAAAAAATTG
GGCGGTAAGTCAGGTGAGTAAATAAATGACGTATCATCACGAAAGCCCTC
TATCACTGAAGATTTAGACCTATGCAATCAGTTATTCGTATTAAATAAAG
ATTTAAAAGCCATATTAGTTTaattctttctttttgctttaGACCTACTA
TGCATACAACCTATCGATCTGGTATTCGCATTAGAGAGTTCTGGTCGAAT
TGCAGAACACCATGAAACAATCAAATCATTCACCGAGAACATTATCAATA
CTTTTGATATCGGTGCCCGTAAAACACACGTTAGTGTAGTCACATTCGGT
GATTTCGCGGACTTGCAGATCAAATTGACCGACAATTATGACAAGAACAA
CCTCATCAGAAAGGTATTGTTGATTTTTatgctttaaaggttttattttt
acataagtgtagCCGTTTCATATCTgaaacatatttcatatcaggagagt
gtcttcctattgttatattatggaaatataaacataaaaaatgtttctct
ttccCAATTTCTAatcatcttgctccacattcgtgtcaatccaataagaa
aaagcttgtaaattaaaattgataagtaagcaaacgatatcactctttat
acttaaaaacaaaacctttaaaagcaTTCAGGAAATAATAAGGGCAATCA
ACTAGCTTTTTTGAGTCGGAGGATAAAGAAATTCAGGTTTGTGTGGATTG
GACCTGTGACGACCGACtcttagagggaatttaatcgAAAAAGTGCTCTA
TAGAGACACTTAAAAGGGAAAAGACTATCATTGCTATCCGAACAAAGTTT
GGGAGGGATTTTAATGTGTCTTTAGATAAAAATTGTTGCCAAGAATCGTA
GAGCAAAAAGCGAAATATTTAGCATACTAATAGTGGTTTAGTTACTTTGT
ATTCGACTTTAACATTGATGGAGATTTTAACGagatttaaactttttgaa
caGAAATATAGATCTTGGTGcgatatttgtcaaaattttagcACCTTGAA
GGTTTTCTTTCCTAGTGAagtttcgaaaatatttttaatcactttcattt
ttcattcaggtcGAAAACCTGGTTCACCAAGGATCAGGCGGTACCGCAAC
CGATGATGTCATCCGTGTTTTACGTGATAGCGTATTCTCACCTTACNCCA
GGTGGTACCgcaaccgatgacgtcatccgTGTGTTACGTGATAGCGTGTT
CTCACCTTACGGACAATCACGTCAAGGCGTTGTCAAAGTTGTGATCTTAC
TCACGAACGGGAAATGTACATCTTGTACTGAAGAAATTTCCACTTTGGTC
AATCCTTTAAAAGATATGGGAATTGCTTTTTTCACTGTTGGTGTCACCGA
GAATATCGATTCTGATGAACTAAAAGCTATTGCTTCAGAACCCTACGAAC
ATTATGGTTTTGAGGTCTTTGATTTTGGAGGATTGAGTCGAATCATCAGC
TCAGTTGCAAGTAAAGTTTGCTCAGGTATAATTGTTTACTTTTACTAGTA
GTTGCCCTTTTAGCGATCCTAGATGATGCTAGGTTTTACCGAATGGCGAG
TATTAGCGAGTTTAAAAGTTTGTGTTTTTTTGCGACAGAGACGGTCACCT
TCTACATTGTCTAGATCTTGATCGACTGAGAACGACGGTAAGTTAGCACT
TTTACCGTATTCGATTTTGCGAATCAAAACTGCAGGtaattccaaatcgc
ttcagtcactccgccGTCCTCATAGGTTCAAATGCATAATCCCGCTATTT
ATATTTGAATAACAAGaatatatttgtatttttgacatttttactACCCG
TGGAGCAATCTTTCAcaaattttgatcgaaaataGGTCAAAAATATTCCG
GAAGTTTTGACCCTTTCAGAAAGTTGTTTCGTTATACTCAATCGCTGGTA
AATTTTATCATGCTTTTTGTTCCCTCTTTCACAGTAAACCGTGGCAAATG
CAGTAAACCAACACCACCATACGGCTGTGCAGGAGCAGGTCGAGATGAAT
GCAACTTTGATGGTGACTGTGTAAGGGCCACGAAATGTTGCTTTGATGGA
TGTGAACGTAAATGCAGCTACCCTATCGCTAGTAAGTAATTAAAAATGGT
TAGAGTTTTAAATAAAACACTACAATCCTGGActatttttttaccttttc
ccATCTTCAATGTTGATATGGAGGTTAGTGGAAGTTGCAAAATTCTTCGT
TCCTACATTGACATTGAGGGAAGGATAAGTGTGGGGATAGGGTTATCGGA
CAGCAGCTCTGTCCTCGATTGTAGGCTACCATGTATGTTAGTATACCTTT
TCTCTAATCATTGaagtttttttagaatcaatttcTATCAGTCCATCACC
AGAAAGGAGTAATGGCCTGTTCGTAGTTTGAGTTTAAGGCATGAATTTCC
taggaaaaactaaaaattcaaaaacctgGGGACCCTGTCTGTGTTTGATT
TTTGGAAACTGTTAGATACACACGGAGCAAAAATTAGTAAATCGTTTGAA
AAAGTGTGCTACAAAAAGAGAAAGAAGTAGCAGTGTCTTACtcttatagt
agggggaaatttgttcgtttttttgttgtcgctcgattgttttggtcaaa
gcacttaatatacatttttggaaagctaaggggtaggggttaatcaaaat
tattgatattaccaatattttaaaatttcatgattttgagatattttggg
aGACTACCAAAAGATTGAAAAAGGAGCTAATTACTAATGTTTATTATTCT
ACTACAGGTTCTTTCACACCGATGGACAtcgctttcgctttcgattCATC
CAACAATGTGCAATCAAAGACTTTTGAACAAATGAAACAATTCGCAATCA
ACATGGTCAAATCGTTCCACGTGTCACCTTATGATACTCGATTCGCCTCG
CTTACTTTCAGGTACTCTCTAAGATTCCATATCCAGTTGCCTCTCCTTAA
GTTGAACTTCGAACGGGGAatattatttgttcgaattacagagagattcg
aattatggaaagtaTTCTAAGAGTGTTTCTCTTTGACGGGGACTGGTAAT
AATTTCGGATTAGAGAAAAATTCGactaatagaagttcgaataaacgAGA
GTATACTATATTGAACTCTTTGTAGACCACTACAATCAGGGTCGAAATTT
GTTAACAAATtagggtattttaacgtttttcagaattgaAAGCTCGGGTG
TGGGTCGcgatttcagtacttccactttgtttaaTTAGACTTTTTGGTTA
GTGAGGGGCTTGGTGGCTGCCAGGCTAAATTCTCAGTCTtacatttttaa
gcttttagatcctgagataaagttaaaactctactttccaaccatACTTT
AAATTACTTgcggttttaaaattttgagggaattccccttttgtacCAAC
TACTGTGCCACCAATTTTAGcgtatataaaaaatattaaacttgaCTCAG
ACTTATCACGTATTCTCATAACTTGTAGCtaatgagcccccccccctcca
gTCAACtttcaaatcacgtaatcacgcaaaaaaaaatccaaatcacGTTC
TCATGAGATAAATTTTCCTCCGATCacgcactttaaaatcttaaatcacg
aaatcacgaacttggaaaaacgccaatcacgccatcacgaaaactgCTGG
GGGGCCTCGCTAATCTTTGTTCAGAAACCATGAACTATGAAAACAAATCA
GTACACGTGTTTGGTTAAtcttaaattctttcttttaGTGACGAATCCAG
CGTTGATTTCAACTTCGCACAATATGACCTTACTGCAGATATTATCCAAG
CTATCACACGTATCGGCCATCGACAAACAGACATTGATCTGGCAGCTgca
ttgaaaatgttgaaatctGACATTTTCAGCCTTCACGGACAAGTTCGAAC
AACAAGACCAATGGTGTTAGTTCTCTTCTATGACGGTGTGTATAATTTAT
GTTCCATACTTAtatggatttttttaaatcaggaaAAAATGTAAATGTGT
AGAAATggcgaaatttgcaaaaaaatcctccgaaaaattatttttatacc
tGGACAATGGactagcaaaaatcagtctttcaccccctgaaaattttaga
ataatcttttaacccctggaaaaataaaaatagcacTCTTAGACCCCGTG
GAAATTCTGCTCGAATtattcgtccaccccctgtataatGGAATAGCCCG
ATACATAATGGACATCAAATGACTTACAAGtgatttctaaatttttaatt
ttacagGGAATGATTCGAAGATTACTTCAAAAGATCTTCACGAGGCGGTC
ACTGAATTGAAAGATTATGGCGTCAAGATAGTCAATGTCGGAGTTGGGGC
ACAggtaaaa

Coding sequence (CDS) from alignment at sc0000180:341516..352225+

>TCONS_00014046 ID=TCONS_00014046|Name=TCONS_00014046|organism=Clytia hemisphaerica|type=CDS|length=10200bp|location=Sequence derived from alignment at sc0000180:341516..352225+ (Clytia hemisphaerica)
ATGAATATGAATAGTCCTCAGGGTGGAAAACTCGTTGGGCTTTTCGCCAT
TTTTATTTTGCTTGCTGTTAATTTGACCGGATTACACGGGCAAGAGGAAG
ACCTACTATGCATACAACCTATCGATCTGGTATTCGCATTAGAGAGTTCT
GGTCGAATTGCAGAACACCATGAAACAATCAAATCATTCACCGAGAACAT
TATCAATACTTTTGATATCGGTGCCCGTAAAACACACGTTAGTGTAGTCA
CATTCGGTGATTTCGCGGACTTGCAGATCAAATTGACCGACAATTATGAC
AAGAACAACCTCATCAGAAAGgtcGAAAACCTGGTTCACCAAGGATCAGG
TGGTACCgcaaccgatgacgtcatccgTGTGTTACGTGATAGCGTGTTCT
CACCTTACGGACAATCACGTCAAGGCGTTGTCAAAGTTGTGATCTTACTC
ACGAACGGGAAATGTACATCTTGTACTGAAGAAATTTCCACTTTGGTCAA
TCCTTTAAAAGATATGGGAATTGCTTTTTTCACTGTTGGTGTCACCGAGA
ATATCGATTCTGATGAACTAAAAGCTATTGCTTCAGAACCCTACGAACAT
TATGGTTTTGAGGTCTTTGATTTTGGAGGATTGAGTCGAATCATCAGCTC
AGTTGCAAGTAAAGTTTGCTCAGTAAACCGTGGCAAATGCAGTAAACCAA
CACCACCATACGGCTGTGCAGGAGCAGGTCGAGATGAATGCAACTTTGAT
GGTGACTGTGTAAGGGCCACGAAATGTTGCTTTGATGGATGTGAACGTAA
ATGCAGCTACCCTATCGCTAGTTCTTTCACACCGATGGACAtcgctttcg
ctttcgattCATCCAACAATGTGCAATCAAAGACTTTTGAACAAATGAAA
CAATTCGCAATCAACATGGTCAAATCGTTCCACGTGTCACCTTATGATAC
TCGATTCGCCTCGCTTACTTTCAGTGACGAATCCAGCGTTGATTTCAACT
TCGCACAATATGACCTTACTGCAGATATTATCCAAGCTATCACACGTATC
GGCCATCGACAAACAGACATTGATCTGGCAGCTgcattgaaaatgttgaa
atctGACATTTTCAGCCTTCACGGACAAGTTCGAACAACAAGACCAATGG
TGTTAGTTCTCTTCTATGACGGGAATGATTCGAAGATTACTTCAAAAGAT
CTTCACGAGGCGGTCACTGAATTGAAAGATTATGGCGTCAAGATAGTCAA
TGTCGGAGTTGGGGCACAggtaaaaATGAATATGAATAGTCCTCAGGGTG
GAAAACTCGTTGGGCTTTTCGCCATTTTTATTTTGCTTGCTGTTAATTTG
ACCGGATTACACGGGCAAGAGGAAGACCTACTATGCATACAACCTATCGA
TCTGGTATTCGCATTAGAGAGTTCTGGTCGAATTGCAGAACACCATGAAA
CAATCAAATCATTCACCGAGAACATTATCAATACTTTTGATATCGGTGCC
CGTAAAACACACGTTAGTGTAGTCACATTCGGTGATTTCGCGGACTTGCA
GATCAAATTGACCGACAATTATGACAAGAACAACCTCATCAGAAAGgtcG
AAAACCTGGTTCACCAAGGATCAGGTGGTACCgcaaccgatgacgtcatc
cgTGTGTTACGTGATAGCGTGTTCTCACCTTACGGACAATCACGTCAAGG
CGTTGTCAAAGTTGTGATCTTACTCACGAACGGGAAATGTACATCTTGTA
CTGAAGAAATTTCCACTTTGGTCAATCCTTTAAAAGATATGGGAATTGCT
TTTTTCACTGTTGGTGTCACCGAGAATATCGATTCTGATGAACTAAAAGC
TATTGCTTCAGAACCCTACGAACATTATGGTTTTGAGGTCTTTGATTTTG
GAGGATTGAGTCGAATCATCAGCTCAGTTGCAAGTAAAGTTTGCTCAGTA
AACCGTGGCAAATGCAGTAAACCAACACCACCATACGGCTGTGCAGGAGC
AGGTCGAGATGAATGCAACTTTGATGGTGACTGTGTAAGGGCCACGAAAT
GTTGCTTTGATGGATGTGAACGTAAATGCAGCTACCCTATCGCTAGTTCT
TTCACACCGATGGACAtcgctttcgctttcgattCATCCAACAATGTGCA
ATCAAAGACTTTTGAACAAATGAAACAATTCGCAATCAACATGGTCAAAT
CGTTCCACGTGTCACCTTATGATACTCGATTCGCCTCGCTTACTTTCAGT
GACGAATCCAGCGTTGATTTCAACTTCGCACAATATGACCTTACTGCAGA
TATTATCCAAGCTATCACACGTATCGGCCATCGACAAACAGACATTGATC
TGGCAGCTgcattgaaaatgttgaaatctGACATTTTCAGCCTTCACGGA
CAAGTTCGAACAACAAGACCAATGGTGTTAGTTCTCTTCTATGACGGGAA
TGATTCGAAGATTACTTCAAAAGATCTTCACGAGGCGGTCACTGAATTGA
AAGATTATGGCGTCAAGATAGTCAATGTCGGAGTTGGGGCACAggtaaaa
ATGAATATGAATAGTCCTCAGGGTGGAAAACTCGTTGGGCTTTTCGCCAT
TTTTATTTTGCTTGCTGTTAATTTGACCGGATTACACGGGCAAGAGGAAG
ACCTACTATGCATACAACCTATCGATCTGGTATTCGCATTAGAGAGTTCT
GGTCGAATTGCAGAACACCATGAAACAATCAAATCATTCACCGAGAACAT
TATCAATACTTTTGATATCGGTGCCCGTAAAACACACGTTAGTGTAGTCA
CATTCGGTGATTTCGCGGACTTGCAGATCAAATTGACCGACAATTATGAC
AAGAACAACCTCATCAGAAAGgtcGAAAACCTGGTTCACCAAGGATCAGG
TGGTACCgcaaccgatgacgtcatccgTGTGTTACGTGATAGCGTGTTCT
CACCTTACGGACAATCACGTCAAGGCGTTGTCAAAGTTGTGATCTTACTC
ACGAACGGGAAATGTACATCTTGTACTGAAGAAATTTCCACTTTGGTCAA
TCCTTTAAAAGATATGGGAATTGCTTTTTTCACTGTTGGTGTCACCGAGA
ATATCGATTCTGATGAACTAAAAGCTATTGCTTCAGAACCCTACGAACAT
TATGGTTTTGAGGTCTTTGATTTTGGAGGATTGAGTCGAATCATCAGCTC
AGTTGCAAGTAAAGTTTGCTCAGTAAACCGTGGCAAATGCAGTAAACCAA
CACCACCATACGGCTGTGCAGGAGCAGGTCGAGATGAATGCAACTTTGAT
GGTGACTGTGTAAGGGCCACGAAATGTTGCTTTGATGGATGTGAACGTAA
ATGCAGCTACCCTATCGCTAGTTCTTTCACACCGATGGACAtcgctttcg
ctttcgattCATCCAACAATGTGCAATCAAAGACTTTTGAACAAATGAAA
CAATTCGCAATCAACATGGTCAAATCGTTCCACGTGTCACCTTATGATAC
TCGATTCGCCTCGCTTACTTTCAGTGACGAATCCAGCGTTGATTTCAACT
TCGCACAATATGACCTTACTGCAGATATTATCCAAGCTATCACACGTATC
GGCCATCGACAAACAGACATTGATCTGGCAGCTgcattgaaaatgttgaa
atctGACATTTTCAGCCTTCACGGACAAGTTCGAACAACAAGACCAATGG
TGTTAGTTCTCTTCTATGACGGGAATGATTCGAAGATTACTTCAAAAGAT
CTTCACGAGGCGGTCACTGAATTGAAAGATTATGGCGTCAAGATAGTCAA
TGTCGGAGTTGGGGCACAggtaaaaATGAATATGAATAGTCCTCAGGGTG
GAAAACTCGTTGGGCTTTTCGCCATTTTTATTTTGCTTGCTGTTAATTTG
ACCGGATTACACGGGCAAGAGGAAGACCTACTATGCATACAACCTATCGA
TCTGGTATTCGCATTAGAGAGTTCTGGTCGAATTGCAGAACACCATGAAA
CAATCAAATCATTCACCGAGAACATTATCAATACTTTTGATATCGGTGCC
CGTAAAACACACGTTAGTGTAGTCACATTCGGTGATTTCGCGGACTTGCA
GATCAAATTGACCGACAATTATGACAAGAACAACCTCATCAGAAAGgtcG
AAAACCTGGTTCACCAAGGATCAGGTGGTACCgcaaccgatgacgtcatc
cgTGTGTTACGTGATAGCGTGTTCTCACCTTACGGACAATCACGTCAAGG
CGTTGTCAAAGTTGTGATCTTACTCACGAACGGGAAATGTACATCTTGTA
CTGAAGAAATTTCCACTTTGGTCAATCCTTTAAAAGATATGGGAATTGCT
TTTTTCACTGTTGGTGTCACCGAGAATATCGATTCTGATGAACTAAAAGC
TATTGCTTCAGAACCCTACGAACATTATGGTTTTGAGGTCTTTGATTTTG
GAGGATTGAGTCGAATCATCAGCTCAGTTGCAAGTAAAGTTTGCTCAGTA
AACCGTGGCAAATGCAGTAAACCAACACCACCATACGGCTGTGCAGGAGC
AGGTCGAGATGAATGCAACTTTGATGGTGACTGTGTAAGGGCCACGAAAT
GTTGCTTTGATGGATGTGAACGTAAATGCAGCTACCCTATCGCTAGTTCT
TTCACACCGATGGACAtcgctttcgctttcgattCATCCAACAATGTGCA
ATCAAAGACTTTTGAACAAATGAAACAATTCGCAATCAACATGGTCAAAT
CGTTCCACGTGTCACCTTATGATACTCGATTCGCCTCGCTTACTTTCAGT
GACGAATCCAGCGTTGATTTCAACTTCGCACAATATGACCTTACTGCAGA
TATTATCCAAGCTATCACACGTATCGGCCATCGACAAACAGACATTGATC
TGGCAGCTgcattgaaaatgttgaaatctGACATTTTCAGCCTTCACGGA
CAAGTTCGAACAACAAGACCAATGGTGTTAGTTCTCTTCTATGACGGGAA
TGATTCGAAGATTACTTCAAAAGATCTTCACGAGGCGGTCACTGAATTGA
AAGATTATGGCGTCAAGATAGTCAATGTCGGAGTTGGGGCACAggtaaaa
ATGAATATGAATAGTCCTCAGGGTGGAAAACTCGTTGGGCTTTTCGCCAT
TTTTATTTTGCTTGCTGTTAATTTGACCGGATTACACGGGCAAGAGGAAG
ACCTACTATGCATACAACCTATCGATCTGGTATTCGCATTAGAGAGTTCT
GGTCGAATTGCAGAACACCATGAAACAATCAAATCATTCACCGAGAACAT
TATCAATACTTTTGATATCGGTGCCCGTAAAACACACGTTAGTGTAGTCA
CATTCGGTGATTTCGCGGACTTGCAGATCAAATTGACCGACAATTATGAC
AAGAACAACCTCATCAGAAAGgtcGAAAACCTGGTTCACCAAGGATCAGG
TGGTACCgcaaccgatgacgtcatccgTGTGTTACGTGATAGCGTGTTCT
CACCTTACGGACAATCACGTCAAGGCGTTGTCAAAGTTGTGATCTTACTC
ACGAACGGGAAATGTACATCTTGTACTGAAGAAATTTCCACTTTGGTCAA
TCCTTTAAAAGATATGGGAATTGCTTTTTTCACTGTTGGTGTCACCGAGA
ATATCGATTCTGATGAACTAAAAGCTATTGCTTCAGAACCCTACGAACAT
TATGGTTTTGAGGTCTTTGATTTTGGAGGATTGAGTCGAATCATCAGCTC
AGTTGCAAGTAAAGTTTGCTCAGTAAACCGTGGCAAATGCAGTAAACCAA
CACCACCATACGGCTGTGCAGGAGCAGGTCGAGATGAATGCAACTTTGAT
GGTGACTGTGTAAGGGCCACGAAATGTTGCTTTGATGGATGTGAACGTAA
ATGCAGCTACCCTATCGCTAGTTCTTTCACACCGATGGACAtcgctttcg
ctttcgattCATCCAACAATGTGCAATCAAAGACTTTTGAACAAATGAAA
CAATTCGCAATCAACATGGTCAAATCGTTCCACGTGTCACCTTATGATAC
TCGATTCGCCTCGCTTACTTTCAGTGACGAATCCAGCGTTGATTTCAACT
TCGCACAATATGACCTTACTGCAGATATTATCCAAGCTATCACACGTATC
GGCCATCGACAAACAGACATTGATCTGGCAGCTgcattgaaaatgttgaa
atctGACATTTTCAGCCTTCACGGACAAGTTCGAACAACAAGACCAATGG
TGTTAGTTCTCTTCTATGACGGGAATGATTCGAAGATTACTTCAAAAGAT
CTTCACGAGGCGGTCACTGAATTGAAAGATTATGGCGTCAAGATAGTCAA
TGTCGGAGTTGGGGCACAggtaaaaATGAATATGAATAGTCCTCAGGGTG
GAAAACTCGTTGGGCTTTTCGCCATTTTTATTTTGCTTGCTGTTAATTTG
ACCGGATTACACGGGCAAGAGGAAGACCTACTATGCATACAACCTATCGA
TCTGGTATTCGCATTAGAGAGTTCTGGTCGAATTGCAGAACACCATGAAA
CAATCAAATCATTCACCGAGAACATTATCAATACTTTTGATATCGGTGCC
CGTAAAACACACGTTAGTGTAGTCACATTCGGTGATTTCGCGGACTTGCA
GATCAAATTGACCGACAATTATGACAAGAACAACCTCATCAGAAAGgtcG
AAAACCTGGTTCACCAAGGATCAGGTGGTACCgcaaccgatgacgtcatc
cgTGTGTTACGTGATAGCGTGTTCTCACCTTACGGACAATCACGTCAAGG
CGTTGTCAAAGTTGTGATCTTACTCACGAACGGGAAATGTACATCTTGTA
CTGAAGAAATTTCCACTTTGGTCAATCCTTTAAAAGATATGGGAATTGCT
TTTTTCACTGTTGGTGTCACCGAGAATATCGATTCTGATGAACTAAAAGC
TATTGCTTCAGAACCCTACGAACATTATGGTTTTGAGGTCTTTGATTTTG
GAGGATTGAGTCGAATCATCAGCTCAGTTGCAAGTAAAGTTTGCTCAGTA
AACCGTGGCAAATGCAGTAAACCAACACCACCATACGGCTGTGCAGGAGC
AGGTCGAGATGAATGCAACTTTGATGGTGACTGTGTAAGGGCCACGAAAT
GTTGCTTTGATGGATGTGAACGTAAATGCAGCTACCCTATCGCTAGTTCT
TTCACACCGATGGACAtcgctttcgctttcgattCATCCAACAATGTGCA
ATCAAAGACTTTTGAACAAATGAAACAATTCGCAATCAACATGGTCAAAT
CGTTCCACGTGTCACCTTATGATACTCGATTCGCCTCGCTTACTTTCAGT
GACGAATCCAGCGTTGATTTCAACTTCGCACAATATGACCTTACTGCAGA
TATTATCCAAGCTATCACACGTATCGGCCATCGACAAACAGACATTGATC
TGGCAGCTgcattgaaaatgttgaaatctGACATTTTCAGCCTTCACGGA
CAAGTTCGAACAACAAGACCAATGGTGTTAGTTCTCTTCTATGACGGGAA
TGATTCGAAGATTACTTCAAAAGATCTTCACGAGGCGGTCACTGAATTGA
AAGATTATGGCGTCAAGATAGTCAATGTCGGAGTTGGGGCACAggtaaaa
ATGAATATGAATAGTCCTCAGGGTGGAAAACTCGTTGGGCTTTTCGCCAT
TTTTATTTTGCTTGCTGTTAATTTGACCGGATTACACGGGCAAGAGGAAG
ACCTACTATGCATACAACCTATCGATCTGGTATTCGCATTAGAGAGTTCT
GGTCGAATTGCAGAACACCATGAAACAATCAAATCATTCACCGAGAACAT
TATCAATACTTTTGATATCGGTGCCCGTAAAACACACGTTAGTGTAGTCA
CATTCGGTGATTTCGCGGACTTGCAGATCAAATTGACCGACAATTATGAC
AAGAACAACCTCATCAGAAAGgtcGAAAACCTGGTTCACCAAGGATCAGG
TGGTACCgcaaccgatgacgtcatccgTGTGTTACGTGATAGCGTGTTCT
CACCTTACGGACAATCACGTCAAGGCGTTGTCAAAGTTGTGATCTTACTC
ACGAACGGGAAATGTACATCTTGTACTGAAGAAATTTCCACTTTGGTCAA
TCCTTTAAAAGATATGGGAATTGCTTTTTTCACTGTTGGTGTCACCGAGA
ATATCGATTCTGATGAACTAAAAGCTATTGCTTCAGAACCCTACGAACAT
TATGGTTTTGAGGTCTTTGATTTTGGAGGATTGAGTCGAATCATCAGCTC
AGTTGCAAGTAAAGTTTGCTCAGTAAACCGTGGCAAATGCAGTAAACCAA
CACCACCATACGGCTGTGCAGGAGCAGGTCGAGATGAATGCAACTTTGAT
GGTGACTGTGTAAGGGCCACGAAATGTTGCTTTGATGGATGTGAACGTAA
ATGCAGCTACCCTATCGCTAGTTCTTTCACACCGATGGACAtcgctttcg
ctttcgattCATCCAACAATGTGCAATCAAAGACTTTTGAACAAATGAAA
CAATTCGCAATCAACATGGTCAAATCGTTCCACGTGTCACCTTATGATAC
TCGATTCGCCTCGCTTACTTTCAGTGACGAATCCAGCGTTGATTTCAACT
TCGCACAATATGACCTTACTGCAGATATTATCCAAGCTATCACACGTATC
GGCCATCGACAAACAGACATTGATCTGGCAGCTgcattgaaaatgttgaa
atctGACATTTTCAGCCTTCACGGACAAGTTCGAACAACAAGACCAATGG
TGTTAGTTCTCTTCTATGACGGGAATGATTCGAAGATTACTTCAAAAGAT
CTTCACGAGGCGGTCACTGAATTGAAAGATTATGGCGTCAAGATAGTCAA
TGTCGGAGTTGGGGCACAggtaaaaATGAATATGAATAGTCCTCAGGGTG
GAAAACTCGTTGGGCTTTTCGCCATTTTTATTTTGCTTGCTGTTAATTTG
ACCGGATTACACGGGCAAGAGGAAGACCTACTATGCATACAACCTATCGA
TCTGGTATTCGCATTAGAGAGTTCTGGTCGAATTGCAGAACACCATGAAA
CAATCAAATCATTCACCGAGAACATTATCAATACTTTTGATATCGGTGCC
CGTAAAACACACGTTAGTGTAGTCACATTCGGTGATTTCGCGGACTTGCA
GATCAAATTGACCGACAATTATGACAAGAACAACCTCATCAGAAAGgtcG
AAAACCTGGTTCACCAAGGATCAGGTGGTACCgcaaccgatgacgtcatc
cgTGTGTTACGTGATAGCGTGTTCTCACCTTACGGACAATCACGTCAAGG
CGTTGTCAAAGTTGTGATCTTACTCACGAACGGGAAATGTACATCTTGTA
CTGAAGAAATTTCCACTTTGGTCAATCCTTTAAAAGATATGGGAATTGCT
TTTTTCACTGTTGGTGTCACCGAGAATATCGATTCTGATGAACTAAAAGC
TATTGCTTCAGAACCCTACGAACATTATGGTTTTGAGGTCTTTGATTTTG
GAGGATTGAGTCGAATCATCAGCTCAGTTGCAAGTAAAGTTTGCTCAGTA
AACCGTGGCAAATGCAGTAAACCAACACCACCATACGGCTGTGCAGGAGC
AGGTCGAGATGAATGCAACTTTGATGGTGACTGTGTAAGGGCCACGAAAT
GTTGCTTTGATGGATGTGAACGTAAATGCAGCTACCCTATCGCTAGTTCT
TTCACACCGATGGACAtcgctttcgctttcgattCATCCAACAATGTGCA
ATCAAAGACTTTTGAACAAATGAAACAATTCGCAATCAACATGGTCAAAT
CGTTCCACGTGTCACCTTATGATACTCGATTCGCCTCGCTTACTTTCAGT
GACGAATCCAGCGTTGATTTCAACTTCGCACAATATGACCTTACTGCAGA
TATTATCCAAGCTATCACACGTATCGGCCATCGACAAACAGACATTGATC
TGGCAGCTgcattgaaaatgttgaaatctGACATTTTCAGCCTTCACGGA
CAAGTTCGAACAACAAGACCAATGGTGTTAGTTCTCTTCTATGACGGGAA
TGATTCGAAGATTACTTCAAAAGATCTTCACGAGGCGGTCACTGAATTGA
AAGATTATGGCGTCAAGATAGTCAATGTCGGAGTTGGGGCACAggtaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007857XLOC_007857Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014046-exon-sc0000180-1491911889:341516..341767TCONS_00014046-exon-sc0000180-1491911889:341516..341767Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1510915933:341516..341767TCONS_00014046-exon-sc0000180-1510915933:341516..341767Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1575043694:341516..341767TCONS_00014046-exon-sc0000180-1575043694:341516..341767Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1491911889:348008..348228TCONS_00014046-exon-sc0000180-1491911889:348008..348228Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1510915933:348008..348228TCONS_00014046-exon-sc0000180-1510915933:348008..348228Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1575043694:348008..348228TCONS_00014046-exon-sc0000180-1575043694:348008..348228Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1491911889:348925..348952TCONS_00014046-exon-sc0000180-1491911889:348925..348952Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1510915933:348925..348952TCONS_00014046-exon-sc0000180-1510915933:348925..348952Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1575043694:348925..348952TCONS_00014046-exon-sc0000180-1575043694:348925..348952Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1491911889:349017..349340TCONS_00014046-exon-sc0000180-1491911889:349017..349340Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1510915933:349017..349340TCONS_00014046-exon-sc0000180-1510915933:349017..349340Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1575043694:349017..349340TCONS_00014046-exon-sc0000180-1575043694:349017..349340Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1491911889:349800..349946TCONS_00014046-exon-sc0000180-1491911889:349800..349946Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1510915933:349800..349946TCONS_00014046-exon-sc0000180-1510915933:349800..349946Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1575043694:349800..349946TCONS_00014046-exon-sc0000180-1575043694:349800..349946Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1491911889:350623..350776TCONS_00014046-exon-sc0000180-1491911889:350623..350776Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1510915933:350623..350776TCONS_00014046-exon-sc0000180-1510915933:350623..350776Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1575043694:350623..350776TCONS_00014046-exon-sc0000180-1575043694:350623..350776Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1491911889:351604..351800TCONS_00014046-exon-sc0000180-1491911889:351604..351800Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1510915933:351604..351800TCONS_00014046-exon-sc0000180-1510915933:351604..351800Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1575043694:351604..351800TCONS_00014046-exon-sc0000180-1575043694:351604..351800Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1491911889:352122..352225TCONS_00014046-exon-sc0000180-1491911889:352122..352225Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1510915933:352122..352225TCONS_00014046-exon-sc0000180-1510915933:352122..352225Clytia hemisphaericaexon
TCONS_00014046-exon-sc0000180-1575043694:352122..352225TCONS_00014046-exon-sc0000180-1575043694:352122..352225Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014046-proteinTCONS_00014046-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000180supercontigsc0000180:341516..352225 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3281	0.454468	0.329801	0.146504	0.133766	0.0931201	0.170036	0.119389	0	0.0608071	0.0885313	0.19399	0.0581161	0.0804722	0.177257	0.195247	38.3821	35.9617	0	0	48.079	45.8375	1.26947	3.23496	33.7126	17.6114	0.479281	0	0.0646593	0.0658776
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008197WAP_dom
IPR002035VWF_A
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0030414peptidase inhibitor activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
molecular_function GO:0030414 peptidase inhibitor activity
Blast
[Close]
BLAST of TCONS_00014046 vs. Swiss-Prot (Human)
Match: MATN1 (Cartilage matrix protein OS=Homo sapiens GN=MATN1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.036e-25
Identity = 111/415 (26.75%), Postives = 183/415 (44.10%), Query Frame = 3 
Query:  231 GLHGQEEDLLC-IQPIDLVFALESSGRIAE-HHETIKSFTENIINTFDIGARKTHVSVVTFGDFADLQIKLTDNYDKNNLIRKVENLVHQGSGGTATDDVIRVLRDSVF--SPYGQSRQ-GVVKVVILLTNGKCTSCTEEISTLVNPLKDMGIAFFTVGVTENIDSDELKAIASEPYEHYGFEVFDFGGLSRIISS------VASKVCSVNRGKCSK---PTP-PYGCAGAGRDECNFDGDCVRATKCCFDGCERKCSYPIASSFTPMDIAFAFDSSNNVQSKTFEQMKQFAINMVKSFHVSPYDTRFASLTFSDESSVDFNFAQYDLTADIIQAITRIGHRQTDIDLAAALKMLKSDIFSLHGQVRTTRPMVLVLFYDGNDSKITSKD-LHEAVTELKDYGVKIVNVGVGAQVK 1427
            GL  Q    LC  +P DLVF ++SS  +     E +K F   +I + D+G   T V +V +      +  L  +  K  L++ V   +   S GT T   I+      F  +  G+SR   + KVVI++T+G+     +++S      +  G+  F +GV  ++D   L+ IASEP + +   V  +  + ++         V S +C+     C +    +P  Y CA       N DG      K C       CS    SS T  D+ F  D S +V+ + FE +K+F   +V +  VS    +   + +S     +F   ++    DI  A+  + + +      AALK L  + F++    R     V ++F DG      S+D +++A  + KD G K+  VGVG  V+
Sbjct:   25 GLAPQSRGHLCRTRPTDLVFVVDSSRSVRPVEFEKVKVFLSQVIESLDVGPNATRVGMVNYASTVKQEFSLRAHVSKAALLQAVRR-IQPLSTGTMTGLAIQFAITKAFGDAEGGRSRSPDISKVVIVVTDGRPQDSVQDVSARA---RASGVELFAIGVG-SVDKATLRQIASEPQDEHVDYVESYSVIEKLSRKFQEAFCVVSDLCATGDHDCEQVCISSPGSYTCACHEGFTLNSDG------KTC-----NVCSGGGGSSAT--DLVFLIDGSKSVRPENFELVKKFISQIVDTLDVSDKLAQVGLVQYSSSVRQEFPLGRFHTKKDIKAAVRNMSYMEKGTMTGAALKYLIDNSFTVSSGARPGAQKVGIVFTDGR-----SQDYINDAAKKAKDLGFKMFAVGVGNAVE 416
The following BLAST results are available for this feature:
BLAST of TCONS_00014046 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MATN18.036e-2526.75Cartilage matrix protein OS=Homo sapiens GN=MATN1 ... [more]
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