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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013718 ID=TCONS_00013718|Name=TCONS_00013718|organism=Clytia hemisphaerica|type=transcript|length=1418bpRun BLAST on NCBI transcript from alignment at sc0000171:248912..255381- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00013718 ID=TCONS_00013718|Name=TCONS_00013718|organism=Clytia hemisphaerica|type=transcript|length=6470bp|location=Sequence derived from alignment at sc0000171:248912..255381- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00013718 vs. Swiss-Prot (Human)
Match: TCF7 (Transcription factor 7 OS=Homo sapiens GN=TCF7 PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 1.223e-40 Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 3
Query: 870 KEPKRPHVKKPLNAFMLFMKEQRPKIAAEYTLKESAAINQILGKRWHALDKSEQAKYYELARKERAIHMQLYPGWSARDNYAQLGRKKKRPRDKNEE 1160
KE K+P +KKPLNAFML+MKE R K+ AE TLKESAAINQILG+RWHAL + EQAKYYELARKER +HMQLYPGWSARDNY G+KK+R R+K++E
Sbjct: 262 KEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNY---GKKKRRSREKHQE 355 The following BLAST results are available for this feature:
BLAST of TCONS_00013718 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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