TCONS_00013717 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013717
Unique NameTCONS_00013717
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2048

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013717 ID=TCONS_00013717|Name=TCONS_00013717|organism=Clytia hemisphaerica|type=transcript|length=2048bp
CGACAGCAACTTTTATGATTTGAACTTTGCCGCTTAACTAGACAACAACG
TATTTGAGGCTCTCTTCCAGCTAGTTTTTGTATATTGTTCATTCTTTGGA
AAAATGTAACTTTACTGTACAGACTTTAAATGGCTAATTCTCCTGTATAT
AGGGTGGTGGTTTTTTAAACTGTATATTTTTGCAAGATAGAAGTTTGTGT
GTTTGTTATGAAATCTTGGTCTGATGATGGTTTATTTTCATCCTTTTTAG
ATATATTTTTATAACATCATATGAATTTAAATGAACTTATAATAACACAT
AAACATCAAACATCATGCCACAATTACCAACTTCTACAGCAGAGGAATAT
GGAGCCGAGGATGAAATTAAACAATACACACAGGAGGAAGGGGAAGAATC
TGACAGTTCCACAGTCGATGTAGTCAATGATATTAAAGACGATTTGCTAA
ATGAAGATGGGCGAGAATCGGTGAAGGGAGATGAGCCTTTGTTTCGAACC
ACATCAAACAGATATAACAAAGATAGTCCAGGATTATATGGAAGGCCAGC
ACCTGTGATAGTGGGACCACATCATAATTACTATGATCAATCAAATGGAT
ATCGAAGCTCAAGTAATCAACAACAACATGGAAATTCATACCAGTCAACA
ACCCAAATCAGAATGCCAATGTACCAAAGAGGGAGTGGTGATGAAAGATA
TAGTTATGAGCATGGCTCATGGCCATCGCAAGTGCCTGTCCATGGTTATG
CTGTAGGATATGGTGCTGGCGGCGTACCGAAAAATTATAATTATCGTTAT
CCACCACATCCTGGAGTTGCATACTACGCACCAggACATGGATACCCAGG
GATGACAGGAAGACCAGTAAAAGAACCGAAACGACCACACGTCAAAAAAC
CACTAAACGCTTTCATGTTATTCATGAAAGAGCAACGACCAAAAATTGCA
GCTGAATATACATTGAAAGAAAGTGCAGCTATCAATCAAATATTAGGGAA
AAGGTGGCATGCATTGGATAAGTCAGaacaagcaaaatattatgaattaG
CAAGAAAAGAACGAGCAATACATATGCAATTATATCCTGGTTGGAGTGCC
CGTGATAACTACGCTCAACTTGGAAGGAAAAAGAAACGACCAAGAGATAA
AAACGAagAAATGAACCCAAAGAAATGTCGTGCACGTTATGGTTTAGATC
GTCAAGAACAATGGTGTAAACCGTGCAGGAGGAAGAAGAAGTGTATTCGA
TTCATTGTTGGTGCTGATGGTGAAACTACTGAGGTGCCTGATAAAGAACA
ACAAACCGAAATAAATTCCGATTCAGATAATGAAAATACCAATGCAGAAA
ATCGTTCTTCTGCTCCTACTAACAATAATACTACAGActctttaaaagaa
aatttatcgGAGCGTGTAACTATGGCAACTACAAAAGAAAACAATCAGAA
TCATCCACATCATCATCAACAACAAAACTCTTtgaataataacaataata
atattaATATTCTATCCGCTACTACTATGGTTAATGCTGCCGCCCCAGCT
GTACCACAATCTTCAAATCCACACGCCCAATCTACACCTTCGACTTACCA
TCAAATGAAAACTGAAACACCCTTATATGCATCTATAGGTCATAGCTCAA
CGTACACCTCGAGTGGGAATAACACTATTGGATACTCAGCACCTCAACCT
GGATCGCGGTCAGAGACGTCTACTATTGATTCGTCTGTTCTGAAAACAAT
ATCCGCTCCTTGCTCTTAGCTGGTAAACAATAAATTGGTAGAAAACTTTC
AATACGTACGATCTGCAGTATCACGAACTTTTTAACTCTAAATTATCTTT
TTCTATTGAGGGACCAACTTTTTAGGAGACAGTTTTTCAATGAAGAACCC
TTATCAGCTTTGTGTTTTcttgacttgaaattttacgATGAATGGGAAAG
AGACAACCTAATTTGTGAATAATGACCTGATTTGTGTTCGTACGTTTTCT
TGAAGCAAGGGTCTCAAAGCGTGAATGGGTTTTGTATTTCTACAAGTG
Run BLAST on NCBI

transcript from alignment at sc0000171:247416..255381-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013717 ID=TCONS_00013717|Name=TCONS_00013717|organism=Clytia hemisphaerica|type=transcript|length=7966bp|location=Sequence derived from alignment at sc0000171:247416..255381- (Clytia hemisphaerica)
CGACAGCAACTTTTATGATTTGAACTTTGCCGCTTAACTAGACAACAACG
TATTTGAGGCTCTCTTCCAGCTAGTTTTTGTATATTGTTCATTCTTTGGA
AAAATGTAACTTTACTGTACAGACTTTAAATGGCTAATTCTCCTGTATAT
AGGGTGGTGGTTTTTTAAACTGTATATTTTTGCAAGATAGAAGTTTGTGT
GTTTGTTATGAAATCTTGGTCTGATGATGGTTTATTTTCATCCTTTTTAG
ATATATTTTTATAACATCATATGAATTTAAATGAACTTATAATAACACAT
AAACATCAAACATCATGCCACAATTACCAACTTCTACAGCAGAGGAATAT
GGAGCCGAGGATGAAATTAAACAATACACACAGGAGGAAGGGGAAGAATC
TGACAGTTCCACAGTCGATGTAGTCAATGATATTAAAGACGATTTGCTAA
ATGAAGATGGGCGAGAATCGGTATATTAGTTTTTTGTCTCATTTTCTTGA
TACGGTTGGCGTTGACTGGTTTTGAATTAAAATTTGTATCATAGATGATG
CAAGTTATATATAGACCTTTTGCTAGGTCCGATCAATGCAATGTTGGTAT
GTTGGATTATAAACTCCAGCATAAATCACGATAATTTCAGGTTTGAATGG
ATAAAAGGAAAACGTTGGTTATTTTTGTTGTTTCCCTCACATTTAATCTA
TTGATTGAAACATAGAAGTATCACGATTTAATGCTGAAGTTTTTAACTAT
CCAACATGACATCGCGCCTAGGAAAAGGTCTATGCTACCGCCAAAACAAG
ACCTGGAATTCCAGGGAATCCTTTATTCCCTCAATTTTGAGGGGTACACT
TATTCTATTCATCAAACTAAACACTTACCGTAAGTTGGTCTAATGTCGAC
ATCCGTCTTCTAATTTTGACATCCTTCTTTATAGATAGGAATAATTAGAA
GGTCGAAATCACTGATAGTCTAAAGATTTTTCCTATCATCGTGCTAATCA
AAGTCAATCAGCGATTCCGACCTTACTCAGTTTCTATTGTTCCTATCTCT
AAAGAAGGGTGTCGAAATTAGAAGACGGATGTCGACATTAGACCAACTTA
CGGTATTTATGACTATGTCATTTCTATTCGAACTACACTTTCCAGAAACA
GAAAAAAAAAACAGGAATTGTTAAAAATAAAATCAGCTCTCAAACTTAAT
TGCTTGGATAGATAGAATTTTATAGATAGACAAAACCTTCTTTTTGCCAG
TACTACCTTTAACCTTAGAAAAAAGCAGCAAAAATATATTGGAAAAGTGG
AATCTTAGTTTTAGAGCCGGTACCGTGAAGTCAGGTAACTTGCATCAGTG
GAGGGAAACTTGCATACCCCTCAAATGACTGACCAAACAAAGCAGCAAAA
TTTCAAAACAAATGAACTGCGTAGCTCCGCTGCTGTCGCAGCTCTACTAT
ACCCTTTTTGTTTTGATTTAACTTTGCATTTTTATAATGACCAGACACGC
CATTCATTTGAGGAGCATGCAAGTTTCCCTCCACTGATGCAAGTTACCCG
ACTTCACGGTATCTTAGATATGAAGAAATAGTACACATAACTTTTAATGA
AAAAGGTGGAAATGGGGTTTAAAGAGGTGATTGGAAAATAGATATATAAT
GAACTTGCAGTACAAGTATGGAGGTTTTATGAATGAATAAAACCAAAAAC
CAGAATGATTTACCAAATTTCCCGAATTGAAACTATTATTCACACAAAAT
CAAAATCTTACGATACTGTAAATGAATCCATTACCTTGAAAACTGTAATA
TGGCAAAACATATCATACACAATATTTAAATTTAACAGTTACTCTCTGGT
ACCTCTCTGGGGGGGGGGGCTGGAATAAAAATATCCTGGTCAGAAATTTT
TTGAAAAGGAGGCTAATACAGCAGAATTAGGGCTAAAGAGGGAACTTTAA
TAAACATTTTCCCAAAAATTAATAAGCCGGGTGTTGGAATAAGAATGTCC
TGGGTGAAAAATTTTCAAAATTAATTAGCGGGGAGACACTAGTAGTCATT
TATTTTATAAATGACATTCAGTCTAGGCCTAAAATCTACAGCAATGTTTA
AAAATTTACCTTTACTACACCCTTTTTCTATAAGAGCAATTTTATAAGAA
CAGTGAGGCTCAAAATCGCTTAAAAATATGAACAATCTAAGAACATCGAG
TCTGCACTACTTAATTTCAGGAAATTTATGGGTCAAATAAAAAAAATTGG
GTGTAAATCCCAATATTCCGCAATTTCACCCTATCCCTGTAAATAAGAGC
AGGATGAAGACAATTTTGAAGCTCAAAGTGCCAAAAAATGAAAAAGCTGA
GGCTCCTCAGAAATTCACTTGTTTCAAAGTTTCCTGTTCACAGCAGGATA
AAAAATAAATGACTAGGAATTTAGGCTCAGGTTCATATTTTACTCTTTTC
ACCATTTTTTAACAAGGCTTTGAGATGAAATTTAATAATAAGTGGTTTTA
TTCCAAGATAATCCCTGGTTTTGTGTATTACTTCATTCAAATTAAAAGAA
GATCAAAGACAACCGACAGTCAAGAGTTATTAATAGCTGTTGTTCTAATT
ATTTCCTTTTCTTTTATTAACTGTCACTAATTAGGTTATCATCATATAAA
GACTTTTTTAGCATTGGAGATGGCTACTAACCTTAAGTTGAACCTTAATA
TTTTAAAGATGATTTTTGTCCCTTGGGAATTATTACATATTTAACACATT
TTCCAATGTGTAAACATTTAAATTCTTTTGTATTTTACAGGTGAAGGGAG
ATGAGCCTTTGTTTCGAACCACATCAAACAGATATAACAAAGATAGTCCA
GGTCAGTCTCAATCATTTATTAATGATATTATGTATCTTTCTATATGTGT
CCTAAATTCGGCTTTTTTCTTCTCTATGTTGAATATGTATTTAAATTTTG
CAGACTCATTCACATATTTTAGTTCAATGCTTGTGGTTTTCTCACTAAAG
ATTTCCTTATTTTCTTTCAATCAGTGATTGCATTATTTTCCTTCTTTGAA
TGCTGTTTAGTTTCTATTTATATTTCCCTGCCAGTTTTTGAAGATGAATA
AATTGTGCAATGTACTCATTTGGGCTGCATAAAATTTTTCTTTTTTCCTC
TCTCCCTTGGTAAACATTTGCCAAATTGTTTTTAAGAAATATTTCAATGC
TTACTATATCCCAATTTTTAGGACAAATGGGAATGTTTTCCATTTCATGA
TTAAATATTTTCTAGGATAAATAGAATAAAAACACAAACATGGTCTATGT
TTTTTCTTTTGATGCAAATATTTTTAGAGTCTATACAGCCTCTGTTTATT
GCCTGGTTTTTCTTTAAAATTTAAAAACAAAAAACCCACTTTAGGTATAA
ATTTTTCACATCTTTCATAATTGGTTATTTGAAAATATTTGAATTCCTTT
TAATTTTGAGGCCAGCCCACTTTTGACTTACCTTGGGCGCAATTCTTCAA
ACAAAAGGAATGAAAGTTTAAAAAAATTACAAATGACTCACATCTTTTAG
TTGTGTAAAGGCAATATTAATTGCTATGAAATACAAAAAAGTGAATTTAA
CCAGAAAATTTGCAGAAAAAGCAACATTTTCAAAATTTTCTGAGGCAATT
TTGAGTGCAGACAAGAAAGCCTGCTGAAATTGTAATTTTTCAAGCTTAAG
CTGATATAAACAAGATGTCATAGCTCACCCCTTTTGTCCCACTCATTTTG
ACATTTTAATTAAGTGATTCTTGATAGACTGTGTTATCAAAACAATCAGT
TTTTAACCCCTCAGTTTCCTGTAAGAACTATATAAATTTAACACAATGTT
GCGAAAATTAGTGTACTTTAGTACAATAGTAAATTGTTGTTTTTATGACC
ATAATATTATAGATTATCAATAATTCATGTGTTTATTTTGCCTGTGAGAT
TGAACTTTCTTTATTTCATATGCAGGATTATATGGAAGGCCAGCACCTGT
GATAGTGGGACCACATGTAAGTGTCATTGAATTTTCCGTAAAAAAGTGAA
ACCATCCTAATGTTCAGTGTGATCTTTTGGTCAATAATACAATGGCATCA
TTCTATGACATTTTTAGTTTAATCTTCCCACATTTATCTTTTATGCTTCT
GTCACTGTATTAATTAGAGTATACTTTTCCTTCCACAGCATAATTACTAT
GATCAATCAAATGGATATCGAAGCTCAAGTAATCAACAACAACATGGAAA
TTCATACCAGTCAACAACCCAAATCAGAATGCCAATGTACCAAAGAGGGA
GTGGTGATGAAAGATATAGTTATGAGCATGGCTCATGGTATGTTTTCAAG
GGTCGTCAAATTCATAATATGCATTGCAATGTCTTCTAACATTAATAAAC
CATAAACCTGACGTAAAATCAGTCAATACGCCACTTGCAACCAGTCAGCT
ATTGGGTCTGTGATGTAATGTTAGAAAACATCGCAATGCTGTATATCCTG
GTATATCATGAATTGTTTAAAAATATAATTTTAGAGTGACAGGAAAAGTT
TTATAAAGCTCCCGTTCTTTCAGAATACAACAAGATTTTAAGTTTTTTAT
TTTATAACCAGGTATTATGTCAATTAAACATTATTTTGATTTTTCCTTCT
TGTTTTTGTTAGGCCATCGCAAGTGCCTGTCCATGGTTATGCTGTAGGAT
ATGGTGCTGGCGGCGTACCGAAAAATTATAATTATCGTTATCCACCACAT
CCTGGAGTTGCATACTACGCACCAGGGTAAAAATAAATTTAGTCTTTTGT
CATCAGTGATTTTTATAATAATCGGGTATAAATAAAAAGTTTGAACTGGT
TTGAACCTTCATGCTTTCATATGATGCATTTGATTTAGAGTATGTGATTC
TTAACTACCAAATTACTTGTTCAATGCCTTATATTCTTTTCTGAATCTAT
TTTTTCATAATATGTAGACATGTTTCCCTTTATTTCTTTTTAGACATGGA
TACCCAGGGATGACAGGAAGACCAGTAAAAGAACCGAAACGACCACACGT
CAAAAAACCACTAAACGCTTTCATGTTATTCATGAAAGAGCAACGACCAA
AAATTGCAGCTGAATATACATTGAAAGAAAGTGCAGCTATCAATCAAATA
TTAGGGAAAAGGGTAAGTGATAGATTTTGAAATGAAGATAACAAATTTTA
GGCTAGACATCGGACATTGCCCGACCCAAATAGCTTCTTGTCCGACCTGA
AAATCATAATTTTTAAGCTAAAGCAACCCTGATCGAACATATTTTCCGAC
CCACTTGAAATTGTTATTTCGAGCCTTAGACACATGCTGAATTTTGACAT
ACTTGAGTACATAGGCATTAGTGTCAATCCGTATGATCTTAAATACATGT
AACATTCTTTTTCAGTGGCATGCATTGGATAAGTCAGAACAAGCAAAATA
TTATGAATTAGCAAGAAAAGAACGAGCAATACATATGCAATTATATCCTG
GTTGGAGTGCCCGTGATAACTACGCTCAACTTGGAAGGAAAAAGAAACGA
CCAAGAGATAAAAACGAAGGTATATTTTCATTTTTTTTGGAATCTATCAT
TTTTTAAATCTTCTTGTCATAAGTATGACATGGTTATCTAAATTTCCAAC
TATTCTAATGCAAAATGTTTGATTAGCTTTCTTCACAGTTTTCAAAGAAG
TCAGAAGGATTTATTTTGTTTGGAGCTGCTACGTGATTGATTATCTTTTA
TAATACTTTTCTTCTCTTAGAAATGAACCCAAAGAAATGTCGTGCACGTT
ATGGTTTAGATCGTCAAGAACAATGGTGTAAACCGTGCAGGTCAGCTCAT
AAACTTTTCATTGATTTCTATGTTTCTTTAAGCTTTTGATAACTCCCTAG
ATTTTACAGTGTTCAAAAATTTTCCGTCTTAGCGAGGTGCCAAAAGAGGT
TTTTCGTCTCCAAATTCAACAAAATTCTGCAAAACAATGAATTTGGCCAG
ATTTGTTGTTTAAAGTCCATTTCCGTCTGTGATGAAAACTTCGCTTTGAC
CACCAATTTTACCTCCAAAACCACTGTCATGACTTTTAGTTACAGCAGAG
TTTCATTGTTACACTTTTCCTGAAAAATGGAGTAAAGCCTTGATCTTTTG
TAAAGATATCAGAAAAATGGCACCAATATCATGCTTCGTGATTCCCCGGC
AATTTGTCGTTATGAATACCCTGTATCAAATCCCTGGAGCTCGATTCTCA
TCTGATTTCATTTCTGTCTATTTCTTACAGGAGGAAGAAGAAGTGTATTC
GATTCATTGTTGGTGCTGATGGTGAAACTACTGAAGTACCTGATAAAGAA
CAACAAACCGAAATAAATTCCGATTCAGATAATGAAAATACCAATGCAGA
AAATCGTGCTTCTGCTCCTACTAACAATAATACTACAGACTCTTTGAAAG
AAAATTTATCGGAGCGTGTANTTTAAATCTTCTTGTCATAAGTATGACAT
GGTTATCTAAATTTCCAACTATTCTAATGCAAAATGTTTGATTAGCTTTC
TTCACAGTTTTCAAAGAAGTCAGAAGGATTTATTTTGTTTGGAGCTGCTA
CGTGATTGATTATCTTTTATAATACTTTTCTTCTCTTAGAAATGAACCCA
AAGAAATGTCGTGCACGTTATGGTTTAGATCGTCAAGAACAATGGTGTAA
ACCGTGCAGGTCAGCTCATAAACTTTTCATTAATTTCTATGTTTCTTTAA
GCTTTTGCTAACTCCCTAGATTTTACAGTGTTCAAAGTTTTTCCGTCTTA
GCAAGGTGCAAAGGATTTTCCGTCTCCAAATTCAACAAAATTCTGCAAAA
CAATGAAGAATATGACCAGATTTGTTGTTTAAAGTCCATTTCCGTCTGTG
CTGAAAACTTCGCTTTGACCACCAATTTTACCTCCAAAGCCACTGTAATG
ACTTTTAGTTACAGAAGAGTTTCATTGTTACACTTTTCCTGAAAAATGGA
GTAAGCCTTGATGTTTTATAAAGATATCAGAAAAATTGCACCAATATCAT
GCTTCGTGATTCCCCGGCAATTTGTCGTTATGAATACCCTGTATCAAATC
CTAGAGCTCGATTCTCATCTGATTTCTGTCTGTCTCTTTCTTACAGGAGG
AAGAAGAAGTGTATTCGATTCATTGTTGGTGCTGATGGTGAAACTACTGA
GGTGCCTGATAAAGAACAACAAACCGAAATAAATTCCGATTCAGATAATG
AAAATACCAATGCAGAAAATCGTTCTTCTGCTCCTACTAACAATAATACT
ACAGACTCTTTAAAAGAAAATTTATCGGAGCGTGTAACTATGGCAACTAC
AAAAGAAAACAATCAGAATCATCCACATCATCATCAACAACAAAACTCTT
TGAATAATAACAATAATAATATTAATATTCTATCCGCTACTACTATGGTT
AATGCTGCCGCCCCAGCTGTACCACAATCTTCAAATCCACACGCCCAATC
TACACCTTCGACTTACCATCAAATGAAAACTGAAACACCCTTATATGCAT
CTATAGGTCATAGCTCAACGTACACCTCGAGTGGGAATAACACTATTGGA
TACTCAGCACCTCAACCTGGATCGCGGTCAGAGACGTCTACTATTGATTC
GTCTGTTCTGAAAACAATATCCGCTCCTTGCTCTTAGCTGGTAAACAATA
AATTGGTAGAAAACTTTCAATACGTACGATCTGCAGTATCACGAACTTTT
TAACTCTAAATTATCTTTTTCTATTGAGGGACCAACTTTTTAGGAGACAG
TTTTTCAATGAAGAACCCTTATCAGCTTTGTGTTTTCTTGACTTGAAATT
TTACGATGAATGGGAAAGAGACAACCTAATTTGTGAATAATGACCTGATT
TGTGTTCGTACGTTTTCTTGAAGCAAGGGTCTCAAAGCGTGAATGGGTTT
TGTATTTCTACAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007658XLOC_007658Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013717-exon-sc0000171-1575043694:254912..255381TCONS_00013717-exon-sc0000171-1575043694:254912..255381Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1575043694:252531..252591TCONS_00013717-exon-sc0000171-1575043694:252531..252591Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1575043694:251366..251406TCONS_00013717-exon-sc0000171-1575043694:251366..251406Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1575043694:251045..251193TCONS_00013717-exon-sc0000171-1575043694:251045..251193Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1575043694:250606..250719TCONS_00013717-exon-sc0000171-1575043694:250606..250719Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1575043694:250220..250388TCONS_00013717-exon-sc0000171-1575043694:250220..250388Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1575043694:249813..249966TCONS_00013717-exon-sc0000171-1575043694:249813..249966Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1575043694:248673..248742TCONS_00013717-exon-sc0000171-1575043694:248673..248742Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1575043694:247416..248235TCONS_00013717-exon-sc0000171-1575043694:247416..248235Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1510915933:254912..255381TCONS_00013717-exon-sc0000171-1510915933:254912..255381Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1510915933:252531..252591TCONS_00013717-exon-sc0000171-1510915933:252531..252591Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1510915933:251366..251406TCONS_00013717-exon-sc0000171-1510915933:251366..251406Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1510915933:251045..251193TCONS_00013717-exon-sc0000171-1510915933:251045..251193Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1510915933:250606..250719TCONS_00013717-exon-sc0000171-1510915933:250606..250719Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1510915933:250220..250388TCONS_00013717-exon-sc0000171-1510915933:250220..250388Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1510915933:249813..249966TCONS_00013717-exon-sc0000171-1510915933:249813..249966Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1510915933:248673..248742TCONS_00013717-exon-sc0000171-1510915933:248673..248742Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1510915933:247416..248235TCONS_00013717-exon-sc0000171-1510915933:247416..248235Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1491911889:254912..255381TCONS_00013717-exon-sc0000171-1491911889:254912..255381Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1491911889:252531..252591TCONS_00013717-exon-sc0000171-1491911889:252531..252591Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1491911889:251366..251406TCONS_00013717-exon-sc0000171-1491911889:251366..251406Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1491911889:251045..251193TCONS_00013717-exon-sc0000171-1491911889:251045..251193Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1491911889:250606..250719TCONS_00013717-exon-sc0000171-1491911889:250606..250719Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1491911889:250220..250388TCONS_00013717-exon-sc0000171-1491911889:250220..250388Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1491911889:249813..249966TCONS_00013717-exon-sc0000171-1491911889:249813..249966Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1491911889:248673..248742TCONS_00013717-exon-sc0000171-1491911889:248673..248742Clytia hemisphaericaexon
TCONS_00013717-exon-sc0000171-1491911889:247416..248235TCONS_00013717-exon-sc0000171-1491911889:247416..248235Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:247416..255381 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.8575	5.88835	1.40275	1.09081	18.3967	15.8771	34.0565	36.6602	11.697	29.925	11.4114	8.72623	19.5303	16.1636	11.9306	15.9823	15.07	18.5926	18.255	23.3255	7.76401	8.99165	15.0746	12.5356	8.5251	9.78727	18.3759	22.1757	16.8297	19.8218
Blast
[Close]
BLAST of TCONS_00013717 vs. Swiss-Prot (Human)
Match: TCF7 (Transcription factor 7 OS=Homo sapiens GN=TCF7 PE=1 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.443e-40
Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 3 
Query:  870 KEPKRPHVKKPLNAFMLFMKEQRPKIAAEYTLKESAAINQILGKRWHALDKSEQAKYYELARKERAIHMQLYPGWSARDNYAQLGRKKKRPRDKNEE 1160
            KE K+P +KKPLNAFML+MKE R K+ AE TLKESAAINQILG+RWHAL + EQAKYYELARKER +HMQLYPGWSARDNY   G+KK+R R+K++E
Sbjct:  262 KEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNY---GKKKRRSREKHQE 355
The following BLAST results are available for this feature:
BLAST of TCONS_00013717 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCF71.443e-4074.23Transcription factor 7 OS=Homo sapiens GN=TCF7 PE=... [more]
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