TCONS_00013715 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013715
Unique NameTCONS_00013715
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2137

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013715 ID=TCONS_00013715|Name=TCONS_00013715|organism=Clytia hemisphaerica|type=transcript|length=2137bp
TTCATCCTTTTTAGATATATTTTTATAACATCATATGAATTTAAATGAAC
TTATAATAACACATAAACATCAAACATCATGCCACAATTACCAACTTCTA
CAGCAGAGGAATATGGAGCCGAGGATGAAATTAAACAATACACACAGGAG
GAAGGGGAAGAATCTGACAGTTCCACAGTCGATGTAGTCAATGATATTAA
AGACGATTTGCTAAATGAAGATGGGCGAGAATCGGTGAAGGGAGATGAGC
CTTTGTTTCGAACCACATCAAACAGATATAACAAAGATAGTCCAGGATTA
TATGGAAGGCCAGCACCTGTGATAGTGGGACCACATCATAATTACTATGA
TCAATCAAATGGATATCGAAGCTCAAGTAATCAACAACAACATGGAAATT
CATACCAGTCAACAACCCAAATCAGAATGCCAATGTACCAAAGAGGGAGT
GGTGATGAAAGATATAGTTATGAGCATGGCTCATGGTATGTTTTCAAGGG
TCGTCAAATTCATAATAtgcattgcaatgtcttctaacattaaTAAACCA
TAAAcctgacgtaaaatcagtcaatacgccACTTGCAACCAGTCAGCTAT
TGGGtctgtgatgtaatgttagaaaaCATCGCAATGCTGTATATCCTGGT
ATATCAtgaattgtttaaaaatataattttagagTGACAGGAAAAGTTTT
ATAAAGCTCCCGTTCTTTCAGAATACAAcaagattttaagttttttattt
tataaccAGGTATTATGTCAATTAaacattattttgatttttccttcTTG
TTTTTGTTAGGCCATCGCAAGTGCCTGTCCATGGTTATGCTGTAGGATAT
GGTGCTGGCGGCGTACCGAAAAATTATAATTATCGTTATCCACCACATCC
TGGAGTTGCATACTACGCACCAggACATGGATACCCAGGGATGACAGGAA
GACCAGTAAAAGAACCGAAACGACCACACGTCAAAAAACCACTAAACGCT
TTCATGTTATTCATGAAAGAGCAACGACCAAAAATTGCAGCTGAATATAC
ATTGAAAGAAAGTGCAGCTATCAATCAAATATTAGGGAAAAGGTGGCATG
CATTGGATAAGTCAGaacaagcaaaatattatgaattaGCAAGAAAAGAA
CGAGCAATACATATGCAATTATATCCTGGTTGGAGTGCCCGTGATAACTA
CGCTCAACTTGGAAGGAAAAAGAAACGACCAAGAGATAAAAACGAagAAA
TGAACCCAAAGAAATGTCGTGCACGTTATGGTTTAGATCGTCAAGAACAA
TGGTGTAAACCGTGCAGGAGGAAGAAGAAGTGTATTCGATTCATTGTTGG
TGCTGATGGTGAAACTACTGAGGTGCCTGATAAAGAACAACAAACCGAAA
TAAATTCCGATTCAGATAATGAAAATACCAATGCAGAAAATCGTTCTTCT
GCTCCTACTAACAATAATACTACAGActctttaaaagaaaatttatcgGA
GCGTGTAACTATGGCAACTACAAAAGAAAACAATCAGAATCATCCACATC
ATCATCAACAACAAAACTCTTtgaataataacaataataatattaATATT
CTATCCGCTACTACTATGGTTAATGCTGCCGCCCCAGCTGTACCACAATC
TTCAAATCCACACGCCCAATCTACACCTTCGACTTACCATCAAATGAAAA
CTGAAACACCCTTATATGCATCTATAGGTCATAGCTCAACGTACACCTCG
AGTGGGAATAACACTATTGGATACTCAGCACCTCAACCTGGATCGCGGTC
AGAGACGTCTACTATTGATTCGTCTGTTCTGAAAACAATATCCGCTCCTT
GCTCTTAGCTGGTAAACAATAAATTGGTAGAAAACTTTCAATACGTACGA
TCTGCAGTATCACGAACTTTTTAACTCTAAATTATCTTTTTCTATTGAGG
GACCAACTTTTTAGGAGACAGTTTTTCAATGAAGAACCCTTATCAGCTTT
GTGTTTTcttgacttgaaattttacgATGAATGGGAAAGAGACAACCTAA
TTTGTGAATAATGACCTGATTTGTGTTCGTACGTTTTCTTGAAGCAAGGG
TCTCAAAGCGTGAATGGGTTTTGTATTTCTACAAGTG
Run BLAST on NCBI

transcript from alignment at sc0000171:247416..255145-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013715 ID=TCONS_00013715|Name=TCONS_00013715|organism=Clytia hemisphaerica|type=transcript|length=7730bp|location=Sequence derived from alignment at sc0000171:247416..255145- (Clytia hemisphaerica)
TTCATCCTTTTTAGATATATTTTTATAACATCATATGAATTTAAATGAAC
TTATAATAACACATAAACATCAAACATCATGCCACAATTACCAACTTCTA
CAGCAGAGGAATATGGAGCCGAGGATGAAATTAAACAATACACACAGGAG
GAAGGGGAAGAATCTGACAGTTCCACAGTCGATGTAGTCAATGATATTAA
AGACGATTTGCTAAATGAAGATGGGCGAGAATCGGTATATTAGTTTTTTG
TCTCATTTTCTTGATACGGTTGGCGTTGACTGGTTTTGAATTAAAATTTG
TATCATAGATGATGCAAGTTATATATAGACCTTTTGCTAGGTCCGATCAA
TGCAATGTTGGTATGTTGGATTATAAACTCCAGCATAAATCACGATAATT
TCAGGTTTGAATGGATAAAAGGAAAACGTTGGTTATTTTTGTTGTTTCCC
TCACATTTAATCTATTGATTGAAACATAGAAGTATCACGATTTAATGCTG
AAGTTTTTAACTATCCAACATGACATCGCGCCTAGGAAAAGGTCTATGCT
ACCGCCAAAACAAGACCTGGAATTCCAGGGAATCCTTTATTCCCTCAATT
TTGAGGGGTACACTTATTCTATTCATCAAACTAAACACTTACCGTAAGTT
GGTCTAATGTCGACATCCGTCTTCTAATTTTGACATCCTTCTTTATAGAT
AGGAATAATTAGAAGGTCGAAATCACTGATAGTCTAAAGATTTTTCCTAT
CATCGTGCTAATCAAAGTCAATCAGCGATTCCGACCTTACTCAGTTTCTA
TTGTTCCTATCTCTAAAGAAGGGTGTCGAAATTAGAAGACGGATGTCGAC
ATTAGACCAACTTACGGTATTTATGACTATGTCATTTCTATTCGAACTAC
ACTTTCCAGAAACAGAAAAAAAAAACAGGAATTGTTAAAAATAAAATCAG
CTCTCAAACTTAATTGCTTGGATAGATAGAATTTTATAGATAGACAAAAC
CTTCTTTTTGCCAGTACTACCTTTAACCTTAGAAAAAAGCAGCAAAAATA
TATTGGAAAAGTGGAATCTTAGTTTTAGAGCCGGTACCGTGAAGTCAGGT
AACTTGCATCAGTGGAGGGAAACTTGCATACCCCTCAAATGACTGACCAA
ACAAAGCAGCAAAATTTCAAAACAAATGAACTGCGTAGCTCCGCTGCTGT
CGCAGCTCTACTATACCCTTTTTGTTTTGATTTAACTTTGCATTTTTATA
ATGACCAGACACGCCATTCATTTGAGGAGCATGCAAGTTTCCCTCCACTG
ATGCAAGTTACCCGACTTCACGGTATCTTAGATATGAAGAAATAGTACAC
ATAACTTTTAATGAAAAAGGTGGAAATGGGGTTTAAAGAGGTGATTGGAA
AATAGATATATAATGAACTTGCAGTACAAGTATGGAGGTTTTATGAATGA
ATAAAACCAAAAACCAGAATGATTTACCAAATTTCCCGAATTGAAACTAT
TATTCACACAAAATCAAAATCTTACGATACTGTAAATGAATCCATTACCT
TGAAAACTGTAATATGGCAAAACATATCATACACAATATTTAAATTTAAC
AGTTACTCTCTGGTACCTCTCTGGGGGGGGGGGCTGGAATAAAAATATCC
TGGTCAGAAATTTTTTGAAAAGGAGGCTAATACAGCAGAATTAGGGCTAA
AGAGGGAACTTTAATAAACATTTTCCCAAAAATTAATAAGCCGGGTGTTG
GAATAAGAATGTCCTGGGTGAAAAATTTTCAAAATTAATTAGCGGGGAGA
CACTAGTAGTCATTTATTTTATAAATGACATTCAGTCTAGGCCTAAAATC
TACAGCAATGTTTAAAAATTTACCTTTACTACACCCTTTTTCTATAAGAG
CAATTTTATAAGAACAGTGAGGCTCAAAATCGCTTAAAAATATGAACAAT
CTAAGAACATCGAGTCTGCACTACTTAATTTCAGGAAATTTATGGGTCAA
ATAAAAAAAATTGGGTGTAAATCCCAATATTCCGCAATTTCACCCTATCC
CTGTAAATAAGAGCAGGATGAAGACAATTTTGAAGCTCAAAGTGCCAAAA
AATGAAAAAGCTGAGGCTCCTCAGAAATTCACTTGTTTCAAAGTTTCCTG
TTCACAGCAGGATAAAAAATAAATGACTAGGAATTTAGGCTCAGGTTCAT
ATTTTACTCTTTTCACCATTTTTTAACAAGGCTTTGAGATGAAATTTAAT
AATAAGTGGTTTTATTCCAAGATAATCCCTGGTTTTGTGTATTACTTCAT
TCAAATTAAAAGAAGATCAAAGACAACCGACAGTCAAGAGTTATTAATAG
CTGTTGTTCTAATTATTTCCTTTTCTTTTATTAACTGTCACTAATTAGGT
TATCATCATATAAAGACTTTTTTAGCATTGGAGATGGCTACTAACCTTAA
GTTGAACCTTAATATTTTAAAGATGATTTTTGTCCCTTGGGAATTATTAC
ATATTTAACACATTTTCCAATGTGTAAACATTTAAATTCTTTTGTATTTT
ACAGGTGAAGGGAGATGAGCCTTTGTTTCGAACCACATCAAACAGATATA
ACAAAGATAGTCCAGGTCAGTCTCAATCATTTATTAATGATATTATGTAT
CTTTCTATATGTGTCCTAAATTCGGCTTTTTTCTTCTCTATGTTGAATAT
GTATTTAAATTTTGCAGACTCATTCACATATTTTAGTTCAATGCTTGTGG
TTTTCTCACTAAAGATTTCCTTATTTTCTTTCAATCAGTGATTGCATTAT
TTTCCTTCTTTGAATGCTGTTTAGTTTCTATTTATATTTCCCTGCCAGTT
TTTGAAGATGAATAAATTGTGCAATGTACTCATTTGGGCTGCATAAAATT
TTTCTTTTTTCCTCTCTCCCTTGGTAAACATTTGCCAAATTGTTTTTAAG
AAATATTTCAATGCTTACTATATCCCAATTTTTAGGACAAATGGGAATGT
TTTCCATTTCATGATTAAATATTTTCTAGGATAAATAGAATAAAAACACA
AACATGGTCTATGTTTTTTCTTTTGATGCAAATATTTTTAGAGTCTATAC
AGCCTCTGTTTATTGCCTGGTTTTTCTTTAAAATTTAAAAACAAAAAACC
CACTTTAGGTATAAATTTTTCACATCTTTCATAATTGGTTATTTGAAAAT
ATTTGAATTCCTTTTAATTTTGAGGCCAGCCCACTTTTGACTTACCTTGG
GCGCAATTCTTCAAACAAAAGGAATGAAAGTTTAAAAAAATTACAAATGA
CTCACATCTTTTAGTTGTGTAAAGGCAATATTAATTGCTATGAAATACAA
AAAAGTGAATTTAACCAGAAAATTTGCAGAAAAAGCAACATTTTCAAAAT
TTTCTGAGGCAATTTTGAGTGCAGACAAGAAAGCCTGCTGAAATTGTAAT
TTTTCAAGCTTAAGCTGATATAAACAAGATGTCATAGCTCACCCCTTTTG
TCCCACTCATTTTGACATTTTAATTAAGTGATTCTTGATAGACTGTGTTA
TCAAAACAATCAGTTTTTAACCCCTCAGTTTCCTGTAAGAACTATATAAA
TTTAACACAATGTTGCGAAAATTAGTGTACTTTAGTACAATAGTAAATTG
TTGTTTTTATGACCATAATATTATAGATTATCAATAATTCATGTGTTTAT
TTTGCCTGTGAGATTGAACTTTCTTTATTTCATATGCAGGATTATATGGA
AGGCCAGCACCTGTGATAGTGGGACCACATGTAAGTGTCATTGAATTTTC
CGTAAAAAAGTGAAACCATCCTAATGTTCAGTGTGATCTTTTGGTCAATA
ATACAATGGCATCATTCTATGACATTTTTAGTTTAATCTTCCCACATTTA
TCTTTTATGCTTCTGTCACTGTATTAATTAGAGTATACTTTTCCTTCCAC
AGCATAATTACTATGATCAATCAAATGGATATCGAAGCTCAAGTAATCAA
CAACAACATGGAAATTCATACCAGTCAACAACCCAAATCAGAATGCCAAT
GTACCAAAGAGGGAGTGGTGATGAAAGATATAGTTATGAGCATGGCTCAT
GGTATGTTTTCAAGGGTCGTCAAATTCATAATATGCATTGCAATGTCTTC
TAACATTAATAAACCATAAACCTGACGTAAAATCAGTCAATACGCCACTT
GCAACCAGTCAGCTATTGGGTCTGTGATGTAATGTTAGAAAACATCGCAA
TGCTGTATATCCTGGTATATCATGAATTGTTTAAAAATATAATTTTAGAG
TGACAGGAAAAGTTTTATAAAGCTCCCGTTCTTTCAGAATACAACAAGAT
TTTAAGTTTTTTATTTTATAACCAGGTATTATGTCAATTAAACATTATTT
TGATTTTTCCTTCTTGTTTTTGTTAGGCCATCGCAAGTGCCTGTCCATGG
TTATGCTGTAGGATATGGTGCTGGCGGCGTACCGAAAAATTATAATTATC
GTTATCCACCACATCCTGGAGTTGCATACTACGCACCAGGGTAAAAATAA
ATTTAGTCTTTTGTCATCAGTGATTTTTATAATAATCGGGTATAAATAAA
AAGTTTGAACTGGTTTGAACCTTCATGCTTTCATATGATGCATTTGATTT
AGAGTATGTGATTCTTAACTACCAAATTACTTGTTCAATGCCTTATATTC
TTTTCTGAATCTATTTTTTCATAATATGTAGACATGTTTCCCTTTATTTC
TTTTTAGACATGGATACCCAGGGATGACAGGAAGACCAGTAAAAGAACCG
AAACGACCACACGTCAAAAAACCACTAAACGCTTTCATGTTATTCATGAA
AGAGCAACGACCAAAAATTGCAGCTGAATATACATTGAAAGAAAGTGCAG
CTATCAATCAAATATTAGGGAAAAGGGTAAGTGATAGATTTTGAAATGAA
GATAACAAATTTTAGGCTAGACATCGGACATTGCCCGACCCAAATAGCTT
CTTGTCCGACCTGAAAATCATAATTTTTAAGCTAAAGCAACCCTGATCGA
ACATATTTTCCGACCCACTTGAAATTGTTATTTCGAGCCTTAGACACATG
CTGAATTTTGACATACTTGAGTACATAGGCATTAGTGTCAATCCGTATGA
TCTTAAATACATGTAACATTCTTTTTCAGTGGCATGCATTGGATAAGTCA
GAACAAGCAAAATATTATGAATTAGCAAGAAAAGAACGAGCAATACATAT
GCAATTATATCCTGGTTGGAGTGCCCGTGATAACTACGCTCAACTTGGAA
GGAAAAAGAAACGACCAAGAGATAAAAACGAAGGTATATTTTCATTTTTT
TTGGAATCTATCATTTTTTAAATCTTCTTGTCATAAGTATGACATGGTTA
TCTAAATTTCCAACTATTCTAATGCAAAATGTTTGATTAGCTTTCTTCAC
AGTTTTCAAAGAAGTCAGAAGGATTTATTTTGTTTGGAGCTGCTACGTGA
TTGATTATCTTTTATAATACTTTTCTTCTCTTAGAAATGAACCCAAAGAA
ATGTCGTGCACGTTATGGTTTAGATCGTCAAGAACAATGGTGTAAACCGT
GCAGGTCAGCTCATAAACTTTTCATTGATTTCTATGTTTCTTTAAGCTTT
TGATAACTCCCTAGATTTTACAGTGTTCAAAAATTTTCCGTCTTAGCGAG
GTGCCAAAAGAGGTTTTTCGTCTCCAAATTCAACAAAATTCTGCAAAACA
ATGAATTTGGCCAGATTTGTTGTTTAAAGTCCATTTCCGTCTGTGATGAA
AACTTCGCTTTGACCACCAATTTTACCTCCAAAACCACTGTCATGACTTT
TAGTTACAGCAGAGTTTCATTGTTACACTTTTCCTGAAAAATGGAGTAAA
GCCTTGATCTTTTGTAAAGATATCAGAAAAATGGCACCAATATCATGCTT
CGTGATTCCCCGGCAATTTGTCGTTATGAATACCCTGTATCAAATCCCTG
GAGCTCGATTCTCATCTGATTTCATTTCTGTCTATTTCTTACAGGAGGAA
GAAGAAGTGTATTCGATTCATTGTTGGTGCTGATGGTGAAACTACTGAAG
TACCTGATAAAGAACAACAAACCGAAATAAATTCCGATTCAGATAATGAA
AATACCAATGCAGAAAATCGTGCTTCTGCTCCTACTAACAATAATACTAC
AGACTCTTTGAAAGAAAATTTATCGGAGCGTGTANTTTAAATCTTCTTGT
CATAAGTATGACATGGTTATCTAAATTTCCAACTATTCTAATGCAAAATG
TTTGATTAGCTTTCTTCACAGTTTTCAAAGAAGTCAGAAGGATTTATTTT
GTTTGGAGCTGCTACGTGATTGATTATCTTTTATAATACTTTTCTTCTCT
TAGAAATGAACCCAAAGAAATGTCGTGCACGTTATGGTTTAGATCGTCAA
GAACAATGGTGTAAACCGTGCAGGTCAGCTCATAAACTTTTCATTAATTT
CTATGTTTCTTTAAGCTTTTGCTAACTCCCTAGATTTTACAGTGTTCAAA
GTTTTTCCGTCTTAGCAAGGTGCAAAGGATTTTCCGTCTCCAAATTCAAC
AAAATTCTGCAAAACAATGAAGAATATGACCAGATTTGTTGTTTAAAGTC
CATTTCCGTCTGTGCTGAAAACTTCGCTTTGACCACCAATTTTACCTCCA
AAGCCACTGTAATGACTTTTAGTTACAGAAGAGTTTCATTGTTACACTTT
TCCTGAAAAATGGAGTAAGCCTTGATGTTTTATAAAGATATCAGAAAAAT
TGCACCAATATCATGCTTCGTGATTCCCCGGCAATTTGTCGTTATGAATA
CCCTGTATCAAATCCTAGAGCTCGATTCTCATCTGATTTCTGTCTGTCTC
TTTCTTACAGGAGGAAGAAGAAGTGTATTCGATTCATTGTTGGTGCTGAT
GGTGAAACTACTGAGGTGCCTGATAAAGAACAACAAACCGAAATAAATTC
CGATTCAGATAATGAAAATACCAATGCAGAAAATCGTTCTTCTGCTCCTA
CTAACAATAATACTACAGACTCTTTAAAAGAAAATTTATCGGAGCGTGTA
ACTATGGCAACTACAAAAGAAAACAATCAGAATCATCCACATCATCATCA
ACAACAAAACTCTTTGAATAATAACAATAATAATATTAATATTCTATCCG
CTACTACTATGGTTAATGCTGCCGCCCCAGCTGTACCACAATCTTCAAAT
CCACACGCCCAATCTACACCTTCGACTTACCATCAAATGAAAACTGAAAC
ACCCTTATATGCATCTATAGGTCATAGCTCAACGTACACCTCGAGTGGGA
ATAACACTATTGGATACTCAGCACCTCAACCTGGATCGCGGTCAGAGACG
TCTACTATTGATTCGTCTGTTCTGAAAACAATATCCGCTCCTTGCTCTTA
GCTGGTAAACAATAAATTGGTAGAAAACTTTCAATACGTACGATCTGCAG
TATCACGAACTTTTTAACTCTAAATTATCTTTTTCTATTGAGGGACCAAC
TTTTTAGGAGACAGTTTTTCAATGAAGAACCCTTATCAGCTTTGTGTTTT
CTTGACTTGAAATTTTACGATGAATGGGAAAGAGACAACCTAATTTGTGA
ATAATGACCTGATTTGTGTTCGTACGTTTTCTTGAAGCAAGGGTCTCAAA
GCGTGAATGGGTTTTGTATTTCTACAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007658XLOC_007658Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013715-exon-sc0000171-1575043694:254912..255145TCONS_00013715-exon-sc0000171-1575043694:254912..255145Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1575043694:252531..252591TCONS_00013715-exon-sc0000171-1575043694:252531..252591Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1575043694:251366..251406TCONS_00013715-exon-sc0000171-1575043694:251366..251406Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1575043694:250606..251193TCONS_00013715-exon-sc0000171-1575043694:250606..251193Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1575043694:250220..250388TCONS_00013715-exon-sc0000171-1575043694:250220..250388Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1575043694:249813..249966TCONS_00013715-exon-sc0000171-1575043694:249813..249966Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1575043694:249542..249611TCONS_00013715-exon-sc0000171-1575043694:249542..249611Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1575043694:247416..248235TCONS_00013715-exon-sc0000171-1575043694:247416..248235Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1510915933:254912..255145TCONS_00013715-exon-sc0000171-1510915933:254912..255145Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1510915933:252531..252591TCONS_00013715-exon-sc0000171-1510915933:252531..252591Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1510915933:251366..251406TCONS_00013715-exon-sc0000171-1510915933:251366..251406Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1510915933:250606..251193TCONS_00013715-exon-sc0000171-1510915933:250606..251193Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1510915933:250220..250388TCONS_00013715-exon-sc0000171-1510915933:250220..250388Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1510915933:249813..249966TCONS_00013715-exon-sc0000171-1510915933:249813..249966Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1510915933:249542..249611TCONS_00013715-exon-sc0000171-1510915933:249542..249611Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1510915933:247416..248235TCONS_00013715-exon-sc0000171-1510915933:247416..248235Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1491911889:254912..255145TCONS_00013715-exon-sc0000171-1491911889:254912..255145Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1491911889:252531..252591TCONS_00013715-exon-sc0000171-1491911889:252531..252591Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1491911889:251366..251406TCONS_00013715-exon-sc0000171-1491911889:251366..251406Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1491911889:250606..251193TCONS_00013715-exon-sc0000171-1491911889:250606..251193Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1491911889:250220..250388TCONS_00013715-exon-sc0000171-1491911889:250220..250388Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1491911889:249813..249966TCONS_00013715-exon-sc0000171-1491911889:249813..249966Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1491911889:249542..249611TCONS_00013715-exon-sc0000171-1491911889:249542..249611Clytia hemisphaericaexon
TCONS_00013715-exon-sc0000171-1491911889:247416..248235TCONS_00013715-exon-sc0000171-1491911889:247416..248235Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:247416..255145 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.168088	0	0	0.36602	0.277183	0.37494	0.459101	1.11139	1.60479	0.949067	0.720661	3.39462	0.285252	0.361311	0.188615	0.369129	0	0.335247	0.280617	0.410648	1.54651	2.72024	0	0.202754	0	0.0690079	0.426603	0	0.427812	0.45582
Blast
[Close]
BLAST of TCONS_00013715 vs. Swiss-Prot (Human)
Match: TCF7 (Transcription factor 7 OS=Homo sapiens GN=TCF7 PE=1 SV=3)

HSP 1 Score: 152.91 bits (385), Expect = 2.619e-40
Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 2 
Query:  959 KEPKRPHVKKPLNAFMLFMKEQRPKIAAEYTLKESAAINQILGKRWHALDKSEQAKYYELARKERAIHMQLYPGWSARDNYAQLGRKKKRPRDKNEE 1249
            KE K+P +KKPLNAFML+MKE R K+ AE TLKESAAINQILG+RWHAL + EQAKYYELARKER +HMQLYPGWSARDNY   G+KK+R R+K++E
Sbjct:  262 KEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNY---GKKKRRSREKHQE 355
The following BLAST results are available for this feature:
BLAST of TCONS_00013715 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCF72.619e-4074.23Transcription factor 7 OS=Homo sapiens GN=TCF7 PE=... [more]
back to top