|
Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013706 ID=TCONS_00013706|Name=TCONS_00013706|organism=Clytia hemisphaerica|type=transcript|length=3482bpRun BLAST on NCBI transcript from alignment at sc0000171:129591..154290- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00013706 ID=TCONS_00013706|Name=TCONS_00013706|organism=Clytia hemisphaerica|type=transcript|length=24700bp|location=Sequence derived from alignment at sc0000171:129591..154290- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00013706 vs. Swiss-Prot (Human)
Match: NOTC2 (Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3) HSP 1 Score: 312.383 bits (799), Expect = 5.279e-87 Identity = 239/725 (32.97%), Postives = 344/725 (47.45%), Query Frame = 3
Query: 1386 CHPNPCAHGSKCTETVGVGFQCSCAVGYKGRTCNERNM--CLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSC--EPNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSENDKGDNSIEAIANLLHIGHVSEIDENAVSRTSIPGAVKTTISH--GVCPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQE--------KSCLCENGGSCVGEGFEAKCLCKPGFGGSKCQ-EHTQCNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRCQ-DTDICKPNPCLHAGSCQDMGDTYKCECKSGFKGRHCE-DMDLCQPNPCKNSGQCFGFNGGYQCDCPKGYRGKNCDQKV-HCLTNPCSNGAECIEILPTPEHPDGGYKCGCKSGFMGTTCEDQ-DFCHNKPCLNDGQCTNYEDGFVCTCSRRYHGEQCQY-INHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQ-ETDYCQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTC-TEPDRCSPNPCAHGACQEIAGGYFCNCTTGFKGTKCSEID--HCAPNPCLHDGRCSEINGGLGFVCQCQLGYKGQNCE-HKDLCHPNPCEHDGLCHEIMTSSSDILSSRDFIRNARDRYTKRSSELDTHAQNKTKRDVGGEVECICTKGYKGRKCAD-MDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQL-MDMCSPNPC 3479
C P+PC +G C +T F+C+C G++G TC ERN+ C + C+N GVC + T ++C+C WTG CT+ C +PN CQN C GGY CVC G+ G CSEN I+ A + ID A P + H C NPC G +C+ + L CTC G+ G C E S CE+ G CV C C G+ G +C+ + +C+ D C + C++++GGF C C G+KG C+ + + C+ NPC++ G C D + ++C C GF G C+ D+D C PC N +C GY+C C G+ G C++ + +C +PC +G +C + + + Y C C G+MG C DQ D C++ PCLNDG+C + +G+ C C G C+ + C +PC + G C+ G++ + C C+ G+ G C + D C NPC C + NGF C C EG +C ++ + C NPC HG C GY C C G+ G C E+D C NPC + G C + G+ C C+ G+KG NC+ + D C NPC + G C + D+ G C C Y G+ C + PC PNPC + +VC S TC C+ GW+G+ C + +D C PC
Sbjct: 225 CAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTC-ERNIDDCPNHRCQNGGVCVDGVNT---YNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCA--NRNGGYGCVCVNGWSGDDCSEN------IDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLN-GQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHG-QCQDGIDS-------YTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIH-GICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCING--VNGFRCICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINC-EVDKNECLSNPCQNGGTCDNLVN--GYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFD---------------------------------------DISG-YTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPC 882 HSP 2 Score: 297.745 bits (761), Expect = 2.397e-82 Identity = 243/762 (31.89%), Postives = 351/762 (46.06%), Query Frame = 3
Query: 1398 PCAHGSKCTETVGVGFQCSCAVGYKGRTCNERNMCLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSCE-PNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSENDKGDNSIE---AIANLLHIGHVSEIDENAVSRTSIPGAVKTTISHGV--CPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQE--KSCL-----CENGGSCVGEGFEAKCLCKPGFGGSKCQEHT-QCNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRCQDTDICKPNPCLHAGSCQD--MGDTYKCECKSGFKGRHC-EDMDLC---QPNPCKNSGQCFGFNGGYQCDCPKGYRGKNCDQKVH-CLTNPCSNGAECIEILPTPEHPDGGYKCGCKSGFMGTTCE-DQDFCHNKPCLNDGQCTNYEDGFVCTCSRRYHGEQCQY-INHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQE--------------------------------------TDYCQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTC-TEPDRCSPNPCAHGACQEIAGGYFCNCTTGFKGTKCS-EIDHCAPNPCLHDGRCSEINGGLGFVCQCQLGYKGQNC-EHKDLCHPNPCEHDGLCHEIMTSSSDILSSRDFIRNARDRYTKRSSELDTHAQN-KTKRDVGGEVECICTKGYKGRKC-ADMDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQ-LMDMCSPNPCR 3482
PC +G C ++C+C VG+ G+ C + CL +PC N C TT FSC+C +TG C + C+ P CQ+ CL L G Y+C C +G+ G+ C +S+ A + ++ G + + +PG +T + CP + C +GG+C +D + + C C +TG C E CL C+NGG+C C+C G+ G C E+ C +C G CI+ V F C C G G C D C NPC C + Y C C G+KG C ED+D C NPC+++G+C +G + C+C KGY G C+ ++ C ++PC N A C++ + GG+ C C GF G CE + + C + PC+N+GQC + + F C C + G CQ I+ C +PC NG KC+ + ++C CA G+ G LC+E D C +PC N+G C + NG+ C+C G G+ C D C+ NPC HG C + Y C C+ GF G +C+ +ID CA NPC C ING GF C C G +C + C NPC H G C ++ + + N ++ L QN T ++ C C KG+KG C ++D C NPCL+ C D + TC C L + G++CQ ++ CSPNPC
Sbjct: 114 PCLNGGTCHMLSRDTYECTCQVGFTGKECQWTDACLSHPCANGSTC---TTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCL--NLPGSYQCQCPQGFTGQYC-------DSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVC-VDGV--NTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKI-------GGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCI--DLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATC--INGVNGFRCICPEGPHHPSCYSQVNECLSNPCIH-GNCTGGLSGYKCLCDAGWVGINCE---VDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCF--DDISGYTCHCVLPYTGKNCQTVLAPCSPNPCE 843 HSP 3 Score: 294.278 bits (752), Expect = 2.832e-81 Identity = 246/759 (32.41%), Postives = 343/759 (45.19%), Query Frame = 3
Query: 1374 VRNHCHPNPCAHGSKC-TETVGVGFQCSCAVGYKGRTCNER----NMCLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSCEPNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSENDKGDNSIEAIANLLHIGHVSEIDENAVSRTSIPGAVKTTISHGVCPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQE-----KSCLCENGGSCVGEGFEAKCLCKPGFGGSKCQEHTQ-CNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRCQD-TDICKPNPCLHAGSCQDMGDTYKCECKSGFKGRHCE-DMDLCQPNPCKNSGQCFGFNGGYQCDCPKGYRGKNCDQKV-HCLTNPCSNGAECIE-------ILPT-PEHPD----------------------GGYKCGCKSGFMGTTCE-DQDFCHNKPCLNDGQCTNYEDGFVCTCSRRYHGEQCQY-INHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQET-DYCQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTCT-EPDRCSPNPCA-HGACQEIAGGYFCNCTTGFKGTKCSE-IDHCAPNPCLHDGRCSEINGGLGFVCQCQLGYKGQNCE-HKDLCHPNPCEHDGLCHEIMTSSS-DILSSRDFI--RNARDRYTKRSSELDTHAQNKTKRDVGGEVECICTKGYKGRKCA-DMDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQ-LMDMCSPNPCR 3482
+ + C NPC G+ C T + + C+C GYKG C E M NPCE+ G C T F C+C + G C + C +PCQN+A CL GG+ C+C G+KG C EI+E C NPC++ G C +D + + +C C GFTG +CQ S C NG C+ +C C GF G C+E+ C+ D C HG C + + + C C+ GY G C D D C +PCL+ G C D+ + Y+C C+ G G +CE + D C NPC + G C Y C C G+ G+ C+ + C +NPC GA CI I P P HP GYKC C +G++G CE D++ C + PC N G C N +G+ CTC + + G CQ I+ C +PC N G C + + C C L Y G CQ C PNPC N C + + C C+ GW+G CT + D C PC HG C G Y C C GF G C E ID C NPC + G C ++G F C C G+ G C+ + C PC++ G C + + S + + D + N + T+ S T D C+C G+ G C +++ C +PCL+ C+ D + C C LG+ G++CQ L+++CS +PC+
Sbjct: 375 LDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCV---NTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDK--IGGFTCLCMPGFKGVHCE---------------------LEINE--------------------CQSNPCVNNGQC-VDKV--NRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQ-CQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIH-GICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSC--MDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSC-----FNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCV--DGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCK 1073 HSP 4 Score: 272.707 bits (696), Expect = 1.699e-74 Identity = 243/782 (31.07%), Postives = 339/782 (43.35%), Query Frame = 3
Query: 1398 PCAHGSKC-TETVGVGFQCSCAVGYKGRTCNERNMCLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSCEPNPCQNNARCLPDGL-----TGGYECVCNKGYKGKLCSEND-------KGDNSIEAIANLLH----IGHVSEIDENAVSRTSIPGAVKTTISHGVCPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQEKSCLCE-----NGGSCVGEG-FEAKCLCKPGFGGSKCQEHT-QCNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRC-QDTDIC--KPNPCLHAGSCQDMGDTYKCECKSGFKGRHCEDM--------------------------------------DLCQPNPCKNSGQCFG--FNGGYQCDCPKGYRGKNCDQKV----HCLTNPCSNGAECIEILPTPEHPDGGYKCGCKSGFMGTTCE-DQDFCHNKPCLNDGQCTNYEDGFVCTCSRRYHGEQCQY-INHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQ-ETDYCQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTCTE-PDRCSPNPCAHGACQEIAGGYFCNCTTGFKGTKCS-EIDHCAPNPCLHDGRCSEINGGLGFVCQCQLGYKGQNCE-HKDLCHPNPCEHDGLCHEIMTSSSDILSSRDFIRNARDRYTKRSSELDTH--AQNKTKR------DVGGEVECICTKGYKGRKC-ADMDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQL-MDMCSPNPCR 3482
PC + C T G G+ C C G+ G C R+ C N C+N G C + +C+C +TG C S +PC + CL G YEC C G+ GK C D ++ +AN G + E V+ IPG C HGG C P +C C GFTG C C NGG+C G F +C C PGF GS C+ + C C +GG+C++ V + C+C + G+ C +D D C +PN C + G+C + Y C C +G+ G C + D C NPC C NG Y C CP+GY+G +C + V +NPC + +C+ DG + C C G+ G CE D + CH+ PC ND C + GF C C + G C+ IN C +PC N G+CV V+ F+C C G+ G +CQ + D C PC N C + NG+ C C+ G+ G+ C E D C P+PC HG CQ+ Y C C G+ G CS +ID C +PCL+DGRC ++ G+ C CQ G G NCE + D C NPC H G+C + + S + S +T + +D A N ++ V G CIC +G C + ++ C NPC+H + + C C GW G +C++ + C NPC+
Sbjct: 34 PCVNEGMCVTYHNGTGY-CKCPEGFLGEYCQHRDPCEKNRCQNGGTCVAQAMLGKA-TCRCASGFTGEDCQYSTS----HPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGH--------------CQHGGTC---LNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNT-------DGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCI--DHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVN--GYQCNCQPGTSGVNCEINFDDCASNPCIH-GICMDGINRYSCVCSP---------GFTGQRCNIDIDECASNPCRKGATCINGVNG-FRCICPEGPHHPSCYSQVNECLSNPCIHGNC---TGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQ 767 HSP 5 Score: 270.781 bits (691), Expect = 7.311e-74 Identity = 202/610 (33.11%), Postives = 295/610 (48.36%), Query Frame = 3
Query: 1368 EFVRNHCHPNPCAHGSKCTETVGVGFQCSCAVGYKGRTCNER-NMCLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSCEPNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSENDKGDNSIEAIANLLHIGHVSEIDENAVSRTSIPGAVKTTISHGV--CPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQE--KSCL---CENGGSCVGEGFEAKCLCKPGFGGSKCQEHT-QCNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRC-QDTDICKPNPCLHAGSCQDMGDTYKCECKSGFKGRHCEDM-DLCQPNPCKNSGQCFGFNGGYQCDCPKGYRGKNCD-QKVHC----------LTNPCSNGAECIEILPTPEHPDGGYKCGCKSGFMGTTCEDQ-DFCHNKPCLNDGQCTNYEDGFVCTCSRRYHGEQCQY-INHCYGSPCHNGGKCVSGVHDFKCDCALGYRGALCQE-TDYCQPNP-CANNGYCTSNEQSNGFVCHCSEGWRGLTCT-EPDRCSPNPCAHGA---CQEIAGGYFCNCTTGFKGTKC-SEIDHCAPNPCLHDGRCSEI-NGGLGFVCQCQLGYKGQNCE 3101
E +N C NPC +G C V G++C+C G+KG C + C NPC N+G C + + G++C C +TG C + C PNPC+N A C Y C+C G++G+ C+ + E I+ + + + PG + C NPC +GG C MD + + C C+ GFTG CQ CL C+NGG+C C C+ GF G C+ + +C E +C +GG C++ + F C C VG+ G C + + C +PCL+ G+C D TY+C C G+ G++C+ + +LC +PCKN G C QC CP G+ G CD V C + + C + CI T + C C G+ G+ CE+Q D C + PC + C+++ G+ C C Y G C+Y ++ C PC NGG C+ V+ FKC C G RG LC+E D C P C N G C ++ G+ C C G+ G C + + C NPC+ C ++ Y C C + F G C + +D C PCL+ G C+ N GF+C+C G+ G C+
Sbjct: 755 EVDKNECLSNPCQNGGTCDNLVN-GYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDIS---GYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDID-----ECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSC-MDGV--NTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNT-------HYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCM--DRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQ 1343 HSP 6 Score: 238.424 bits (607), Expect = 1.105e-63 Identity = 200/644 (31.06%), Postives = 275/644 (42.70%), Query Frame = 3
Query: 1380 NHCHPNPCAHGSKCTETVGVGFQCSCAVGYKGRTCNERNM-CLPNPCENEGVCTESTTTPEGFSCQCHDSWTGHVCTQKKSSCEPNPCQNNARCLPDGLTGGYECVCNKGYKGKLCSENDKGDNSIEAIANLLHIGHVSEIDENAVSRTSIPGAV--KTTISHGVCPVNPCLHGGICEMDALQPSGKRCTCMSGFTGTLCQ-------EKSCLCENGGSCVGEGFEAKCLCKPGFGGSKC-QEHTQCNEDTCMHGGLCIEEVGGFKCKCDVGYKGKRCQD-TDICKPNPC------------------------------------------------LHAGSCQDMGDTYKCECKSGFKGRHCED-MDLCQPNPCKNSGQCFGFNGGYQCDCPKGYRGKNCDQKV-HCLTNPCSNGAECIEILPTPEHPDGGYKCGCKSGFMGTTCEDQ-DFCHNKP-CLNDGQCTNYEDGFVCTCSRRYHGEQCQ-YINHCYGSPCHNGGK--CVSGVHDFKCDCALGYRGALCQE-TDYCQPNPCANNGYC-TSNEQSNGFVCHCSEGWRGLTCTEPDRCSPNPCAHG-ACQEIAGGYFCNCTTGFKGTKCSEIDHCAPNPCLHDGRCSEINGGLGFVCQCQLGYKGQNCE 3101
+ C NPC + C + + G+ C C + Y G+ C C PNPCEN VC ES E ++C C W G CT C PC N+ C G Y C C G+ G C E+ + +AN G N S +PG K C PC +GG C + C C +GF G C+ E SC NGG+CV CLC GF GS C E +C+ C++ G C++ +G ++C C +GY GK CQ ++C +PC H+G C + G+T+ C+C G+ G +CE+ +D C NPC++ C F GGY+C+C GY+G NC+ +V C PC NG CI+++ +KC C G G CE+ D C P CLN GQC + G+ C C + GE+C+ IN C +PC + G C+ +D+ C C + G C+ D C PC N G C ++ +GF+C C G+ G C C C G C A G C C + CA +PC H G C + CQC + G CE
Sbjct: 797 DECASNPCLNQGTCFDDIS-GYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNF-ESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLC--HNTQGSYMCECPPGFSGMDCEEDID-----DCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYV---NSYTCKCQAGFDGVHCENNINECTESSCF--NGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLV-------NHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQS--SCGQVKCRKGEQCVHTASGPRCFCPSPRDCES-----GCASSPCQHGGSCHPQRQPPYYSCQCAPPFSGSRCE 1412 HSP 7 Score: 116.316 bits (290), Expect = 5.467e-26 Identity = 103/357 (28.85%), Postives = 152/357 (42.58%), Query Frame = 3
Query: 2559 KPCLNDGQCTNYEDGF-VCTCSRRYHGEQCQYINHCYGSPCHNGGKCVSGVH-------------------------------------------DFKCDCALGYRGALCQETDYCQPNPCANNGYCTSNEQSNGFVCHCSEGWRGLTC-TEPDRCS-PNPCAH-GACQEIAGGYFCNCTTGFKGTKCSEI-DHCAPNPCLHDGRCSEINGGLGFVCQCQLGYKGQNCEHK-DLCHPNPCEHDGLCHEIMTSSSDILSSRDFIRNARDRYTKRSSELDTHAQNKTKRDVGGEVECICTKGYKGRKCAD-MDPCYPNPCLHNSVCISDDKSTSTTCKCSLGWKGEHCQLMDMCSPNPC 3479
+PC+N+G C Y +G C C + GE CQ+ + C + C NGG CV+ ++C C +G+ G CQ TD C +PCAN CT+ +N F C C G+ G C T+ + C P C H G C + G Y C C GF G C + CAP+PC++ G C + G F C C G++G CE D C + C++ G+C + + + + + + + + + + T + G C+C G+ G C++ +D C C S CI D+ S +C C G G C L D C NPC
Sbjct: 33 EPCVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRDPCEKNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWTDACLSHPCANGSTCTT--VANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQ-TGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCI--DRVASFSCMCPEGKAGLLCHLDDACISNPC 384 The following BLAST results are available for this feature:
BLAST of TCONS_00013706 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
|
Copyright © 2026, MARIMBA.