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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013686 ID=TCONS_00013686|Name=TCONS_00013686|organism=Clytia hemisphaerica|type=transcript|length=982bp
TTTGGATTTCGATGGCAAACTGAGCCATGATCGTATCTGGAATTTAAGAA
CCTCACCACGAATGACATAGATTTTACATATTATGAAATTGGTGATCGTT
TCAAAATACCAAATAGAGAGAAAAAGACTTTTGAGGAGATCGTTTGAGAG
ACGACATATTTGCAACCAGACAGACGGGTTGATTACCATAAAGAAGGACT
TCTATACTGTATTATTACTGTGTAGACTTATTACATCAACGAGACGGGGT
TCACtcgattgaaaatttcagatttagTCCAGTACTTTTATGACGTTTTT
GAGTAGTGCATTGGTCTTATTTTGTTTCGTTTTTCGTTTTACCTGGTGGG
TGAAGGTTACCGAGTtaatgtatcggaggatatcgagggcgacggtaagt
cgATAGTCGATGTACGGCTCTATGTCACCTtagctcacctaaacagacaa
cggtattttggtgtttttaccgtcgtcgagcaaagNGGCTCTATGTCACC
Taagctcacctaaacagacaacggtattttggtgtttttaccgtcgtcga
gcaaagtcgacggtgattttggagacatgtcaactttgctttataccgtc
cccctcgatttatctcgaatacataaactcgctattggtTACTGGTTACT
GGTCAAATTGTTATTCGCCTTTATATTAATCTTGttttattgtcattttt
aacAATACCTTTTAACATTCGAAATGctcaaatgacttttttgatgTCAA
TTCAAAATTATTCAAAGGGCTTGTAATTAACATAccgttttcaaaaaata
ccaGTTTCATGTTTTACAGCATTCTTACCCTATGAGAATAAATTATgcgg
gaataaattaatgcggaattaattaagggctctgaccatagtgaattttt
cataattgccgtgtttaaaatgtgttttctgactgatgtaaccaacaaaa
ctatggcatgttatacattttctgttagacaa Run BLAST on NCBI transcript from alignment at sc0000171:402318..403729+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013686 ID=TCONS_00013686|Name=TCONS_00013686|organism=Clytia hemisphaerica|type=transcript|length=1412bp|location=Sequence derived from alignment at sc0000171:402318..403729+ (Clytia hemisphaerica)
TTTGGATTTCGATGGCAAACTGAGCCATGATCGTATCTGGAATTTAAGAA
CCTCACCACGAATGACATAGATTTTACATATTATGAAATTGGTGATCGTT
TCAAAATACCAAATAGAGAGAAAAAGACTTTTGAGGAGATCGTTTGAGAG
ACGACATATTTGCAACCAGAGTAagttcttttctattttctttttctttt
ttggtttttatcGTTCTTATTTACGTAAtagacgttttttataagaacta
actGTTTGAGaaacaaactttataaaaacataaagcttcgatgaccaaaa
tgttaagaacaagttaagaatattttaaggcttaatCGACTCTTAAAAAC
AATCTTAGGAAATCgcacaaaaatattcacaaaatggtgaaaataagaac
attctaaaaatattttagccttaagactcaaaaaattaggaacatccgaa
gttttaaaaaattaagtttttataaaaaaacatgtaatagaTCGGAGGTT
CCAAATCGAAAAAAAGCATATTTCACGAATGAAGGCgcctaaaaaatata
aatttctatttaaattttctgatttatATTTGATGGGTTTTTTACCACAG
CAGACGGGTTGATTACCATAAAGAAGGACTTCTATACTGTATTATTACTG
TGTAGACTTATTACATCAACGAGACGGGGTTCACtcgattgaaaatttca
gatttagTCCAGTACTTTTATGACGTTTTTGAGTAGTGCATTGGTCTTAT
TTTGTTTCGTTTTTCGTTTTACCTGGTGGGTGAAGGTTACCGAGTtaatg
tatcggaggatatcgagggcgacggtaagtcgATAGTCGATGTACGGCTC
TATGTCACCTtagctcacctaaacagacaacggtattttggtgtttttac
cgtcgtcgagcaaagNGGCTCTATGTCACCTaagctcacctaaacagaca
acggtattttggtgtttttaccgtcgtcgagcaaagtcgacggtgatttt
ggagacatgtcaactttgctttataccgtccccctcgatttatctcgaat
acataaactcgctattggtTACTGGTTACTGGTCAAATTGTTATTCGCCT
TTATATTAATCTTGttttattgtcatttttaacAATACCTTTTAACATTC
GAAATGctcaaatgacttttttgatgTCAATTCAAAATTATTCAAAGGGC
TTGTAATTAACATAccgttttcaaaaaataccaGTTTCATGTTTTACAGC
ATTCTTACCCTATGAGAATAAATTATgcgggaataaattaatgcggaatt
aattaagggctctgaccatagtgaatttttcataattgccgtgtttaaaa
tgtgttttctgactgatgtaaccaacaaaactatggcatgttatacattt
tctgttagacaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013686-exon-sc0000171-1491911889:402318..402487 | TCONS_00013686-exon-sc0000171-1491911889:402318..402487 | Clytia hemisphaerica | exon |
| TCONS_00013686-exon-sc0000171-1510915933:402318..402487 | TCONS_00013686-exon-sc0000171-1510915933:402318..402487 | Clytia hemisphaerica | exon |
| TCONS_00013686-exon-sc0000171-1575043694:402318..402487 | TCONS_00013686-exon-sc0000171-1575043694:402318..402487 | Clytia hemisphaerica | exon |
| TCONS_00013686-exon-sc0000171-1491911889:402918..403729 | TCONS_00013686-exon-sc0000171-1491911889:402918..403729 | Clytia hemisphaerica | exon |
| TCONS_00013686-exon-sc0000171-1510915933:402918..403729 | TCONS_00013686-exon-sc0000171-1510915933:402918..403729 | Clytia hemisphaerica | exon |
| TCONS_00013686-exon-sc0000171-1575043694:402918..403729 | TCONS_00013686-exon-sc0000171-1575043694:402918..403729 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000171 | supercontig | sc0000171:402318..403729 + |
Blast
The following BLAST results are available for this feature:
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