TCONS_00013469 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013469
Unique NameTCONS_00013469
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1460

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013469 ID=TCONS_00013469|Name=TCONS_00013469|organism=Clytia hemisphaerica|type=transcript|length=1460bp
tttttagctCAAACAATTAAAAAGTATAAAGGAAAATGGGTGCTGAAAAG
CATAAGATTTGGGTGTATGGAATGGTAACCGATTTGAAATTCCATAAAGC
TAAAGTAACAGCAGAGGGCTCATATCAGAAGAAACCCAATGAAGTAGACC
CACCTATTGTCAAATCCATGCTCGAGCATGAATGGCTTGAATTTATTGAT
GACTACAAGAAGaGTTCCGGAGGATCGTTAATGTCATATACCGAAACCAC
TTTGGTAACCGTGAATGGAAACGAGTTTGTTGGAAGAGCTGACGACTTTA
TCATATTTTGCTCACAGCATTATGAGTTCAAAGACCTTAGgCCAGAACCA
TTATTTGAAGCAATGGCACGTATGGAGTACGAGGAACTATTACAATCAAG
AAAGCATGATCTTGTTCATTTTGATATTCGAGTTGGTGAAGAAGAGATCG
GTAAAATGTTGATTGAGCTGTACAACGACATGGTGCCAACGACGTGTGCC
AACTTCAAACAATTGTGTATTGGTGATCGCAAATCCGTCATCAAGAATGA
TCCTACACCATGGCATTTGAAATATGAGAATTCGGTCTTCCATAGGGTGG
TCAAGAATGGCTGGATACAAGGTGGAGATATCATTCATGGCAGCGGTGAT
AATGGTTGGTCAATCTATGGAGAAACATTTGAAGatGAAAATTACTCAGT
ATTACATTCGAAGCGTGGCATCGTCGGCATGGCGAATAAAGGGCGGCACA
GCAATTCTTCACAATTCTACATCACTTTTCAACCCGCCCCTTGGATGGAT
TGCCAATATGTTGCTTTTGGGCAAGTGATTGAAGGTTTGGATACGTTAGC
GAAAATGGAAGCACTCGACACTTACAATGAACGACCACtcaatatttgca
aaatcagCAATTGTGGTGTGGTTGATATTAAGAAATGGGTCGATTCCATG
TGAAGATTCATTTGGATCCTGCATGATACAAAGAATTTCAAAGCTGTATT
TATGAAGAACTTGGTTGATTACATACAAAAACGTAAATTTCAATGTCATG
CACAAAGTATATAGTATCTTTGAACATTTTTCGTAGACAATTTGCTTCAG
TTTTGGCTTCACTGTAGTAGTTTAGAAGCTTAAATTGATCTCACAATTTT
AGATGACCTTTTATAACTCCAGTTAAACTAACTCTGTTCACTGTTCAGAG
ATGCTGCTTTTTGAGTTGTTTTTAATAGTAAATATTTCTTCTCAACCGAA
AATGTTTAAGTCAAAATTACGCAACCAGTTGTAAATAGCGTGTAAAGATA
ttattgtgaaaatttttaaattgtaCAGTTTGCATAATGCTTTTGAATGG
ggtaatataaataaaaaatatttttgatgtcaGCTAAAATTTAACGATTT
CAAATCTGTGCCTACTTTTAACTTGGATGCACAACACAAAGGCGTGGTTA
AGAGACCGTG
Run BLAST on NCBI

protein sequence of TCONS_00013469-protein

>TCONS_00013469-protein ID=TCONS_00013469-protein|Name=TCONS_00013469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
MGAEKHKIWVYGMVTDLKFHKAKVTAEGSYQKKPNEVDPPIVKSMLEHEW
LEFIDDYKKSSGGSLMSYTETTLVTVNGNEFVGRADDFIIFCSQHYEFKD
LRPEPLFEAMARMEYEELLQSRKHDLVHFDIRVGEEEIGKMLIELYNDMV
PTTCANFKQLCIGDRKSVIKNDPTPWHLKYENSVFHRVVKNGWIQGGDII
HGSGDNGWSIYGETFEDENYSVLHSKRGIVGMANKGRHSNSSQFYITFQP
APWMDCQYVAFGQVIEGLDTLAKMEALDTYNERPLNICKISNCGVVDIKK
WVDSM
Run BLAST on NCBI

transcript from alignment at sc0000168:359410..370345+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013469 ID=TCONS_00013469|Name=TCONS_00013469|organism=Clytia hemisphaerica|type=transcript|length=10936bp|location=Sequence derived from alignment at sc0000168:359410..370345+ (Clytia hemisphaerica)
tttttagctCAAACAATTAAAAAGTATAAAGGAAAATGGGTGCTGAAAAG
CATAAGATTTGGGTGTATGGAATGGTAACCGATTTGAAATTCCATAAAGC
TAAAGTAACAGCAGAGGTGATACATTTTATCTCGTTTTGAAGATTATTTC
AGTCAAAGTCGATTTCCGAAGAAATATTTTGTTGtgaatctcaaaatttg
acATTTAACATTGTCGACGATGCTAATATTTTTGACTGTTAAGACAACGT
CAACTAGCAGATTCAATTTTTACTAGAAATGGATATAATTTATTAGGTTG
GTCCTTTAAAACTcacaattttgtgatttttttgtttttttgtctttttg
tctttttcgtAGTGTTTCATCCTCTTCTATAGCCTTATATTGAATATCAA
TGTCCTCGACAATGGAGCCACTCGTTTCGTAGACAATGCTCACCGATGCA
GTTTTGTTTCATCAAACTTACTTTAAAATTTGTAATCTTTTGCAGGGCTC
ATATCAGAAGAAACCCAATGAAGTAGACCCACCTATTGTCAAATCCATGC
TCGAGCATGAATGGCTTGAATTTATTGATGACTACAAGAAGGTATAATTT
AGGGAAGGCTTTAATACTAGGGAACTTGTATATTTAAAGGGTTTCTTTGT
TTACCACTTTGAAGGTTTCAAATAATGCGCATCTTATATGCTAAGCTTCA
GAATATAATCGCGGAAAACCGTTTGAAGGTATCTAGGGTCAAACTTTCCG
AAAAAATCCGTATCCATCATATTGCCCGATtacttttttctaaaactcaa
TCAATTCAAAACTGCACTGCGCCGATCGCAGGAATCTACATTATTTAATT
TGTccaaaaaggttttttaaacCTTGAAATCTTAATACAATAGAATATTC
ACtatttgattaattttagaGTTCCGGAGGATCGTTAATGTCATATACCG
AAACCACTTTGGTAACCGTGAATGGAAACGAGTTTGTTGGAAGAGCTGAC
GACTTTATCATATTTTGCTCACAGCATTATGAGTTCAAAGACCTTAGGTA
CGTTTTAATGAAAGAACTAaacaataataatattgaataaaGCCCTTTGA
CAGAAATAAGGGTGAATATTTTGATGACCTAGATCTCCTATGTACTTGAA
TgaaagatttattttctttaaaaacaggCCAGAACCATTATTTGAAGCAA
TGGCACGTATGGAGTACGAGGAACTATTACAATCAAGAAAGGTACTTAAT
CCTATATATATTAACGTGTCTTATTGAAAAAATGGTCCCATGAATTAACC
TTTGTCCATTCTCCTGAGGATACCAATACACACGACCAAgtatgattcaa
ttgtcaataaaattgatttttgcacccgaaactttctaaaaatcgctaGA
ATAGccgaaaaaacggtttttcttgaatctCTCGAGCTGCAGTTGacact
ttttcataaaatttcgcacactgatgcaaaatggcaataccttaAATGTA
ACAGAGctcaatttttgagaatttacttctgattttttttacagCATGAT
CTTGTTCATTTTGATATTCGAGTTGGTGAAGAAGAGATCGGTAAAATGTT
GATTGAGGTAAGTAATAATTATAAACAAACTGACGTCCTACTGATTCTTG
ACAGTACTTTCATAATAGCGACATACGcattagacgatgttatcgtccgt
tacagtgataataaaggcgggaaaatatggcgctATGGCGgcgtatacgg
aaaaaaatcagcgggaaagtttcgaagaaacgacaGGCAAACTTTAACGA
CTGTAAACTTATTTCGGTAAAAAAAACCGTCtgcaaattttcttcggctt
tgggcttatttcttagaaaGTGATTTGTTTtaagactatagcatagtcta
tatATATACGCATTATCCTTTTGTCTCGTACATACTTATTGGGTCATATT
GGGTCAACTCGAAATCCTTAAAAGCTGAGCTATCTTTACTAAAGCCATTA
GATTGGAGGATACCAGTGAAACTTTGGTGTATGGTCGAacatacaaaaaa
attaaatttagttgGAATTCAATATGGCGAATAgcggaaaaaataaattt
tggaatTGGCCTATTTCGGGTAAATCCGCAAAATCCATATCTACTTAGTT
TTTCGCATCATTACAACGACTTCACAAAATCTGAGTAAGTGCAACTTCTC
TTGACGCATTGAGATCATGTATGGAGCTATATAGAGTGTACATGGTTAAT
AATCTCCTCCCTAAGTAATCCATCGGTTATGGAACATCTAAAAGAAGCGT
TTTGCAGTGATTGTGTAAATCATAAAgttaattaaagtctgtctcaatat
aatttgcagcggagacaaaaaagactataacttttgatagagaattcgaa
ttagatagctgTTTTTcgcttgttgaaaagacaaacaggagtggaatatt
atcataaagaaaaaacttaaaaaatatcggaaaatgaagatttaaaagga
agaagaagaaaattaacttcttcaataatagtcctattattataattttt
acatgagtgattctttgatcttcaTCAATGTAAAAGAATTGTTCAAAGAA
ATTTGTTCCATCGAAAGATAACTGTCCAAAATTTATCACTTATTGacttt
aaaaatcattaaaaaacaacaaaaaagagtcCTTTTTCAAGTTAACCAGG
GCAAAGTTTTGAGCTGTATTATTTGACTGAATgtaaatttcatgaatttt
ttttcgcatttagttctaagattaaagaatttctgatataaaaatgaaga
tcatagcattGTTCTACGAGAAGCTgagtttcttcttcttcatttttcat
cttcgtttttcgatcttttaatttatttccttttttgataacattccact
ccggattatcttttcaacaagcacaaaaccgccATCTTATTCGAAAAAGT
TATAGTCTTTTTAGTCTCTTTTCACAACAGTTGTATAACTACCATTCTCC
CCGAAGCAGTTGATATTGATTATATGACGAAATATATGTATGGTCATCCA
TTGTGtgatattaagcagatattcaatgggtaaaagttggttattgagat
ttattaacccgaggtgatgtaatattcaacgaggcgaagccgagttgaat
ataaatcaccgagggttaataaatccaataaccaacgaaaacctattgaa
tatatgttttattatatacctagaggcaaaaataaaacattaattATATC
AATAGTCAAACGTTTCacttaaaacactcccataatcgaacgttcgaatg
tttttcttttttaatgattttcttaattactttgagttataaaatttgtt
tatgaaattaacaatagatttattttaatgaatttctttgataacaacaa
gagcagaacaaaaaaaatcaagcttTGAAtgcaaaatgtgaaaaaaaatt
ctaccgtggtataatagccatggtatatcaggaattattcaatggctgtt
tttgcctacaggtatataataattaCATTTATATTAATTTTCATTAATAG
AAATGTAACGCTAGTAGCAAACGCTTAGTTTTTATGTCTTTCCGTACCAT
AAAATATTTCGtcatctatattataatacgttTAAGTCATGAAGCTATTT
CGCTAGCGGTTTCTAAGCACATGGCAATACTTTTTCGCGCTTTTTTCTGG
ATAGCTCTTTCAATtcgtcaattttcaattttcagccttGAAATGAAAAc
cgtaaaaacattttttttcctttttctaatcttcttTTTTGAGCATTCAT
TAAGAGTATTTTGAAACTGAACACccattatctttttctttttggaccta
ccccggtggaggtcctataaattaacctttgtccgttagtctgttcgttc
gtttttagcattcctcatgattggctcgttagttttttctgattttttgc
acaaagatgcataactataaaccctcgaatgtgacggagcccgattttca
aaaaaaaagttttttaggcaaatttgggccaaaaaacggctaaaaaacgg
gttttttggactttgtgaaaaattaggtcgttatttttttctgacttttc
gcatgaaagtagggtaccatcgtaggtaaaagatggctcaagcgaatttt
cgcaaaaaaattttattggctcaaaaaacgcatgtttatctataagaatc
actattaataagcatacatcaatgttcttagtcaaattactcaatttttt
tatgagatttttgctcaggagggcttacttttaaagaatatgtgtgtttc
gacatgaaattttggttgcttggtgtattttttataaaataactggccaa
actcgatatttttttataagcgcattatcaattacttaggtattaccttt
tctcgagattggctatttcattctttacgattttttgaacaaagatgcat
aactataaaccctcgaatgtgacggagcctaattttcaaaaaatttgggg
gtaaatttcagctaaaaagagatgtttttttgctctcgaagtcttgaata
tgaaagaatatttaaagaGCATGaagttttggtttctaaacgtgtttttt
tataagaagcaaacgactaattttaatagatcgtcactatttgtgttctg
aatgattgtttaatggtcacgcttacgtagatatcaattatatatgtgtt
aaatgcataaccaggtaggtccataaaagtatcacttgttcatttttaaa
tatctaattttcaaagctatttaaaatctttcaaagtcaccctcgaatCT
CCACCCACAATTTAATCATAATGTGTCATTCAATATGCAATAAAACTATt
gttacttttgaaaaaagcaaGAGATCATTTATGTATTTCTCTTAAAAATA
AGTGAAACGAAGCGAAACGAAGCAAGCTTCATTATCATTGTAAAGAGTCG
TCTCGACATCGACACCGGGAATGCTACCTAGTGTCTATATATTCTACACT
CAAAGTAATGACATTCTATTACTTTCTCCATGGAAACCTGATTCCACCCA
TGTTCTGTAATGATCAATAATTGAAATCAATAATACTATCGTGATCTTAT
AAATCGTATTATATACTGATTTTGCAGATTGTAAGAGAGGTTTTAAAGCT
GCTTcacgaaaattgtttttaatGCAGTGGTTTAGATGATTGAAATTTGT
ATGAATGAATATGAACAACACATAGCTGTTTAAGAAATAGATCAATAGAT
GTAATTTTTCTATTACTGCAATTCATTGTGAAATCTTAATGGCTTCCGAA
TTTAATTACTAACAGCCCTCATTATAGAAATTTCAACATCGCATTTTTAG
CGTGGTCAATAAAGCAACTTGCAGCTTGTAAAAGAGAGCACttatattgt
tgtttattgacaCAAACACGCATATAAAACTAACAAATGAACGATGAAAG
AAACTTGGACTGCCAGCGACTTCATAGAGTCGTTGACACCTGGAAATAGA
TTTTCaatcaaagtagtatttctagCAACTTTGAGTATGTTTCCTTCGGG
AATTACatatttcataaattttcaagTAGCCTCTTCATTACAATGCCAAT
GGGAACTAACTTCATCCGAATTGACTTTGATCACTGTTGTCTTTCTTGTT
GGCGAGGGTGTCGGCTCTTGGTATTGGGGCCGAATGGCCGATATTTATGG
CCGGAAAATGATTCTGATTATGGCTACAGTTTTTACTATATACTTCACAT
TGATGTCAGCAGCTAGCCCATCGTTTTTCTTTTATCTTATATTACGTTTC
TTTATTGGGACACTGTTTAATGTTCTGATGGTAATATGTATTGTATATAA
TACTGAATATACTACGAGTGCCGATCACGGACTAAGCATATTATGGTTGA
ATGTTTTCTATTTGTTTGGAAATTTATATGGTATAGCTGTCTCTTATGGA
ACATTAAACAGATATGATTGGAGAACTTATATGGTTGTCGTTATGTTACC
TTGTGTTATTTTGGTGCCACCAATGTTATGGTTGCCAGAGTCCATCCGCT
TCTTACAAGTtcaaaaaaagaccaaagaTATTCTAAATATTTTAGATGAT
ATTTCGAGAACTAACAAACAGCCTTGGCCCGAAAACGCCCAATTGAGAGC
CACGTCCACAACTTCGACGACCTATCACAGTCAAGGCTACGTTAAAGTTG
TTACCAGTCATTGGAAAAAACTGCTTGGATTATGTTTACTCGGAGTCCCT
ATGTTTATAAGCTACTATGGGTTaccatttttgataaattttaaactTCA
ACATAAAAATACATGTAAAGTTCTTGAAAGTGACGCTTTAATACCATCGT
GTCTCCCACTTACCGATACTGAAATTATGGGCTCTTTATATGTCAATCTC
GGACTATTGCCTGGTACGTTTATTGGTTATTTTTTAGCCGAGAAAATCGG
GCGTAAACCTTTAATGGCTTTCAATGCTGTGGTTTTGGCAATGACTTATT
GCAGCCAGTTACTGTGCTTGCCCAGTGGGGTGACATACTTTTTATTGTTC
TTCTCTTCGGGTATTGCATTGAGTGCATGTTGTTTTATATTTCTATACGC
AGCTGAATTATTCCCAACAAACACACGTGCTACGGGGACTGGAATAGCGG
CTACCGTATGGAAAATTGCATCATTAATAGCCCCTATACTGTTTCAACAA
TTGATTTACACGCATTATACTTTTGTGTTGGTTTTGATGGCAGTTTCAAG
TATGTTTGGATTGCTTGGTTTGCTATTGCTTCCAGAAActcttcataaaa
agttgaaatagaCCTACCCTATTGgttaaaattttgttgataaaaTTATT
GGTTAGCAAATCATATGAAAAATATCGACAACAAATGAAACTTTCCTCAA
TTTTTACAAACGATCTTTTTTACAACCAAGATATCTAACAATGGATAAGT
CGAATTTACTGTTGTAAACATTTTATTATATAATTTGGAAATGTAAAAGC
TCGTCAAGAAAACTATGTACATCTTGTTTTCTCGAATATCCCAGGATACG
ACTTCTGAATTCGTGCTCATGTGTAGAAAGTAATTGTTTAATCACCTAAT
TCTCACCAAAGACACgcatataccttatcggccggcgttaaaagggccgg
cgttaaaagggccaagattttgcaattttaaccttaaagcggcgttaatt
gtttgtcattatttctcaatttaaagggtttcaaagataaaaattatgca
ttgttttacttttatttaaaaacttcagtgaaatcagtgattttcgatgg
aattttcaacagtttactactgaaaaatgacattttaatgtaaattctag
tcattatttactaatttgaagcataagtagccatttttacaaattttggc
gtggttaacggccctaattggcgtaagcccaaaattaggctgtggcgtaa
taagggccggggtaaaaggggccggcgttaaattagggccggcgtgaaaa
gggccgataaggtacacaGAAATCGTTAAATTATACCTCTAACTTAACCC
AGTTAACGTTTATTAATTGGCCTATGAATTTTTCTATAGTTGTATTTACT
GGATTTACTTTAAAGTCATCGTTTAAAACTGAACgcttttcttttcaaga
tttgtTTCCACTCAATTTTTTTAGCCAGAATTGAGGCTGACTTTCTTGTA
ATATTGGAAAACGAGAAATTCAAGTCACAGTTTAACTAATGCAAGTTCTA
GATGTCTTAGTTTATTTTGGGTTTAATTTTCGTCAAGTTCTGGAAAATTA
TGCTCCAAATTATGCTTCAGTTTTTTCTGGTCTTCAATTTCTCCTTCTTC
ATGGAACTTATAGCTATTTGTTGGGTCAATATGCGcgcttttttcaaatt
tctttttcttccgTATTCAATATGTTTTTCCTTTCTTCTTGGTCAGCTGT
ACAACGACATGGTGCCAACGACGTGTGCCAACTTCAAACAATTGTGTATT
GGTGATCGCAAATCCGTCATCAAGAATGATCCTACACCATGGCATTTGAA
ATATGAGAATTCGGTCTTCCATAGGGTGGTCAAGAATGGCTGGATACAAG
GTGGAGGTACGGTCGGTGTTTCACCTTAGTGCTTGTTAGTAGGGGGgaat
ttgttcaatttttttaggTCGCTCGACTGTTTTAGTCGAAgtacttgtta
tacatttttggaaagctaagggataggggaatcaaaataacataaGTGCC
AAtatttttcggacactttggtgtgttttTCGGACAAATTTGACGGCCTC
AGgtaaaaatcatagggtcaaaatttaatgaaaattttagctttagaaaa
gagagacctgttgtatatttttggaaagctttcaaaaagttaagattaga
gatatattgtgagtataggtgatttctgtacctaactcaagatattaacc
cttaaaaatagtgtttttcagccagaaacagctaatttgtccactttttg
cactttttgaagctcaagATCTCGAGTTAGGTAGAGAAATCATATACATC
ATATACACtcgtctgaaaaaaaattggcacccaagttattttgattcccc
taccctttacttttccaaaaatgtaaaaCACGTACTTTGACTAAAACAGT
CGAGTGATTTCCCCCTACTATGTCGTGGAACGTTGCCTTAAAAGCGTTGA
CTTTCTACAtcatattttacgtggataagCCCACTAGCCCTAGAATATTT
GGACTTTCGACATTCTTTAGATTGTTTTCACAAGATCCACGGATATTCAG
CTCGGCTATCTAttaactgaacggaacattagAAGGAGCGGGTTTTTtaa
cccattgagtttaaagcccgaaaggctagagaagaatctttaacctttct
caatcaagaaaaagtgaaaccacAAAATTTGTAACGCTTTTGGGATGACC
GTTTGAATCTAGCGCTTCCTTTATTTTCATGCggtatatttttcgaaatc
tggcgatGGACTTCACTTTCAATCTggtgtttgtgtgaaaaccacgcgtg
TCACGCGTTTAAGATGGAAAATAAGtgacttcatttcccatccgagagat
tgggctcttccagaaaatgtccgtacatagagggtggaggatatattgtc
cgggggggtaaatttgctctgtccggggtgatttgggttgtccggggggt
caactgatgcttgcttgggggtaaaacccgttgtccgggAGGGGGCCAAA
AGTTACTTtgtcactgaaaattgttatatcctccaccctacatattcaat
ttttttctggaaaaaaccATTTTAGAAGAATTTTAAAGGATAAATCTTCT
TCTATCATAGATATCATTCATGGCAGCGGTGATAATGGTTGGTCAATCTA
TGGAGAAACATTTGAAGGTAAACTTAACTTTATTTTCTTCTTATAACTGG
ACGTTTTTATAATAGGTGGAGTCAACATTTCAAGTGAATGGTCctcagta
atctaggacttttatgCAGGTCTTTTGATTGTGTTCACGGGGTCCAAGGC
CAGCCGGTTCGGCCATGTATTTACTGAACGAAACACTGAAAGGAATGGGG
ATTCGAACCCCTGGTTTCAGGCATTGGCGCCTTTCCGCTTTTTTTCTTTG
CTTCTTAAACCACGAATAATGGTATAACTCACAGTCAAGTGCCTTTCTTT
TCCCGAAGACTATGAAATGAAACATTTCAACATTCAACTGTTGCGTTATC
GCAGCACGTAAATGCTTTATTCAAGATATATTCAGTGTCATGGTAACAAG
TAGCAgcccgttcgttcgttcattattctatttttcaagtctgaatgaaa
tttaattttttgtttgcagatGAAAATTACTCAGTATTACATTCGAAGCG
TGGCATCGTCGGCATGGCGAATAAAGGGCGGCACAGCAATTCTTCACAAT
TCTACATCACTTTTCAACCCGCCCCTTGGATGGATTGCCAATATGTTGCT
TTTGGGTAAGCGACCCCTGTCTCCGTTTTGTTCGGTCGATTTTATTCCAG
AATTCTCGTCACAAACAACGTTTCTTACCTAGCACAATTACTTATAAATT
GCTTGCTATAGCACAATTGgcctttcaaaaaaatcatatacCTCTGTGTT
GAGGAGGTAATTCCCAAGAGGGAAAGTTTTGATATGGTGGTGGAATTTCA
TAGTGACATACAACACATTTAACAGCACATCAAAAATCTCTCTACCAAAC
AACTATATTATTTTCTACCATGTATTTCTACTTTTTCACCAAATAGGCAA
GTGATTGAAGGTTTGGATACGTTAGCGAAAATGGAAGCACTCGACACTTA
CAATGAACGACCACtcaatatttgcaaaatcagCAATTGTGGTGTGGTTG
ATATTAAGAAATGGGTCGATTCCATGTGAAGATTCATTTGGATCCTGCAT
GATACAAAGAATTTCAAAGCTGTATTTATGAAGAACTTGGTTGATTACAT
ACAAAAACGTAAATTTCAATGTCATGCACAAAGTATATAGTATCTTTGAA
CATTTTTCGTAGACAATTTGCTTCAGTTTTGGCTTCACTGTAGTAGTTTA
GAAGCTTAAATTGATCTCACAATTTTAGATGACCTTTTATAACTCCAGTT
AAACTAACTCTGTTCACTGTTCAGAGATGCTGCTTTTTGAGTTGTTTTTA
ATAGTAAATATTTCTTCTCAACCGAAAATGTTTAAGTCAAAATTACGCAA
CCAGTTGTAAATAGCGTGTAAAGATAttattgtgaaaatttttaaattgt
aCAGTTTGCATAATGCTTTTGAATGGggtaatataaataaaaaatatttt
tgatgtcaGCTAAAATTTAACGATTTCAAATCTGTGCCTACTTTTAACTT
GGATGCACAACACAAAGGCGTGGTTAAGAGACCGTG

Coding sequence (CDS) from alignment at sc0000168:359410..370345+

>TCONS_00013469 ID=TCONS_00013469|Name=TCONS_00013469|organism=Clytia hemisphaerica|type=CDS|length=8262bp|location=Sequence derived from alignment at sc0000168:359410..370345+ (Clytia hemisphaerica)
ATGGGTGCTGAAAAGCATAAGATTTGGGTGTATGGAATGGTAACCGATTT
GAAATTCCATAAAGCTAAAGTAACAGCAGAGGGCTCATATCAGAAGAAAC
CCAATGAAGTAGACCCACCTATTGTCAAATCCATGCTCGAGCATGAATGG
CTTGAATTTATTGATGACTACAAGAAGaGTTCCGGAGGATCGTTAATGTC
ATATACCGAAACCACTTTGGTAACCGTGAATGGAAACGAGTTTGTTGGAA
GAGCTGACGACTTTATCATATTTTGCTCACAGCATTATGAGTTCAAAGAC
CTTAGgCCAGAACCATTATTTGAAGCAATGGCACGTATGGAGTACGAGGA
ACTATTACAATCAAGAAAGCATGATCTTGTTCATTTTGATATTCGAGTTG
GTGAAGAAGAGATCGGTAAAATGTTGATTGAGCTGTACAACGACATGGTG
CCAACGACGTGTGCCAACTTCAAACAATTGTGTATTGGTGATCGCAAATC
CGTCATCAAGAATGATCCTACACCATGGCATTTGAAATATGAGAATTCGG
TCTTCCATAGGGTGGTCAAGAATGGCTGGATACAAGGTGGAGATATCATT
CATGGCAGCGGTGATAATGGTTGGTCAATCTATGGAGAAACATTTGAAGa
tGAAAATTACTCAGTATTACATTCGAAGCGTGGCATCGTCGGCATGGCGA
ATAAAGGGCGGCACAGCAATTCTTCACAATTCTACATCACTTTTCAACCC
GCCCCTTGGATGGATTGCCAATATGTTGCTTTTGGGCAAGTGATTGAAGG
TTTGGATACGTTAGCGAAAATGGAAGCACTCGACACTTACAATGAACGAC
CACtcaatatttgcaaaatcagCAATTGTGGTGTGGTTGATATTAAGAAA
TGGGTCGATTCCATGTGAATGGGTGCTGAAAAGCATAAGATTTGGGTGTA
TGGAATGGTAACCGATTTGAAATTCCATAAAGCTAAAGTAACAGCAGAGG
GCTCATATCAGAAGAAACCCAATGAAGTAGACCCACCTATTGTCAAATCC
ATGCTCGAGCATGAATGGCTTGAATTTATTGATGACTACAAGAAGaGTTC
CGGAGGATCGTTAATGTCATATACCGAAACCACTTTGGTAACCGTGAATG
GAAACGAGTTTGTTGGAAGAGCTGACGACTTTATCATATTTTGCTCACAG
CATTATGAGTTCAAAGACCTTAGgCCAGAACCATTATTTGAAGCAATGGC
ACGTATGGAGTACGAGGAACTATTACAATCAAGAAAGCATGATCTTGTTC
ATTTTGATATTCGAGTTGGTGAAGAAGAGATCGGTAAAATGTTGATTGAG
CTGTACAACGACATGGTGCCAACGACGTGTGCCAACTTCAAACAATTGTG
TATTGGTGATCGCAAATCCGTCATCAAGAATGATCCTACACCATGGCATT
TGAAATATGAGAATTCGGTCTTCCATAGGGTGGTCAAGAATGGCTGGATA
CAAGGTGGAGATATCATTCATGGCAGCGGTGATAATGGTTGGTCAATCTA
TGGAGAAACATTTGAAGatGAAAATTACTCAGTATTACATTCGAAGCGTG
GCATCGTCGGCATGGCGAATAAAGGGCGGCACAGCAATTCTTCACAATTC
TACATCACTTTTCAACCCGCCCCTTGGATGGATTGCCAATATGTTGCTTT
TGGGCAAGTGATTGAAGGTTTGGATACGTTAGCGAAAATGGAAGCACTCG
ACACTTACAATGAACGACCACtcaatatttgcaaaatcagCAATTGTGGT
GTGGTTGATATTAAGAAATGGGTCGATTCCATGTGAATGGGTGCTGAAAA
GCATAAGATTTGGGTGTATGGAATGGTAACCGATTTGAAATTCCATAAAG
CTAAAGTAACAGCAGAGGGCTCATATCAGAAGAAACCCAATGAAGTAGAC
CCACCTATTGTCAAATCCATGCTCGAGCATGAATGGCTTGAATTTATTGA
TGACTACAAGAAGaGTTCCGGAGGATCGTTAATGTCATATACCGAAACCA
CTTTGGTAACCGTGAATGGAAACGAGTTTGTTGGAAGAGCTGACGACTTT
ATCATATTTTGCTCACAGCATTATGAGTTCAAAGACCTTAGgCCAGAACC
ATTATTTGAAGCAATGGCACGTATGGAGTACGAGGAACTATTACAATCAA
GAAAGCATGATCTTGTTCATTTTGATATTCGAGTTGGTGAAGAAGAGATC
GGTAAAATGTTGATTGAGCTGTACAACGACATGGTGCCAACGACGTGTGC
CAACTTCAAACAATTGTGTATTGGTGATCGCAAATCCGTCATCAAGAATG
ATCCTACACCATGGCATTTGAAATATGAGAATTCGGTCTTCCATAGGGTG
GTCAAGAATGGCTGGATACAAGGTGGAGATATCATTCATGGCAGCGGTGA
TAATGGTTGGTCAATCTATGGAGAAACATTTGAAGatGAAAATTACTCAG
TATTACATTCGAAGCGTGGCATCGTCGGCATGGCGAATAAAGGGCGGCAC
AGCAATTCTTCACAATTCTACATCACTTTTCAACCCGCCCCTTGGATGGA
TTGCCAATATGTTGCTTTTGGGCAAGTGATTGAAGGTTTGGATACGTTAG
CGAAAATGGAAGCACTCGACACTTACAATGAACGACCACtcaatatttgc
aaaatcagCAATTGTGGTGTGGTTGATATTAAGAAATGGGTCGATTCCAT
GTGAATGGGTGCTGAAAAGCATAAGATTTGGGTGTATGGAATGGTAACCG
ATTTGAAATTCCATAAAGCTAAAGTAACAGCAGAGGGCTCATATCAGAAG
AAACCCAATGAAGTAGACCCACCTATTGTCAAATCCATGCTCGAGCATGA
ATGGCTTGAATTTATTGATGACTACAAGAAGaGTTCCGGAGGATCGTTAA
TGTCATATACCGAAACCACTTTGGTAACCGTGAATGGAAACGAGTTTGTT
GGAAGAGCTGACGACTTTATCATATTTTGCTCACAGCATTATGAGTTCAA
AGACCTTAGgCCAGAACCATTATTTGAAGCAATGGCACGTATGGAGTACG
AGGAACTATTACAATCAAGAAAGCATGATCTTGTTCATTTTGATATTCGA
GTTGGTGAAGAAGAGATCGGTAAAATGTTGATTGAGCTGTACAACGACAT
GGTGCCAACGACGTGTGCCAACTTCAAACAATTGTGTATTGGTGATCGCA
AATCCGTCATCAAGAATGATCCTACACCATGGCATTTGAAATATGAGAAT
TCGGTCTTCCATAGGGTGGTCAAGAATGGCTGGATACAAGGTGGAGATAT
CATTCATGGCAGCGGTGATAATGGTTGGTCAATCTATGGAGAAACATTTG
AAGatGAAAATTACTCAGTATTACATTCGAAGCGTGGCATCGTCGGCATG
GCGAATAAAGGGCGGCACAGCAATTCTTCACAATTCTACATCACTTTTCA
ACCCGCCCCTTGGATGGATTGCCAATATGTTGCTTTTGGGCAAGTGATTG
AAGGTTTGGATACGTTAGCGAAAATGGAAGCACTCGACACTTACAATGAA
CGACCACtcaatatttgcaaaatcagCAATTGTGGTGTGGTTGATATTAA
GAAATGGGTCGATTCCATGTGAATGGGTGCTGAAAAGCATAAGATTTGGG
TGTATGGAATGGTAACCGATTTGAAATTCCATAAAGCTAAAGTAACAGCA
GAGGGCTCATATCAGAAGAAACCCAATGAAGTAGACCCACCTATTGTCAA
ATCCATGCTCGAGCATGAATGGCTTGAATTTATTGATGACTACAAGAAGa
GTTCCGGAGGATCGTTAATGTCATATACCGAAACCACTTTGGTAACCGTG
AATGGAAACGAGTTTGTTGGAAGAGCTGACGACTTTATCATATTTTGCTC
ACAGCATTATGAGTTCAAAGACCTTAGgCCAGAACCATTATTTGAAGCAA
TGGCACGTATGGAGTACGAGGAACTATTACAATCAAGAAAGCATGATCTT
GTTCATTTTGATATTCGAGTTGGTGAAGAAGAGATCGGTAAAATGTTGAT
TGAGCTGTACAACGACATGGTGCCAACGACGTGTGCCAACTTCAAACAAT
TGTGTATTGGTGATCGCAAATCCGTCATCAAGAATGATCCTACACCATGG
CATTTGAAATATGAGAATTCGGTCTTCCATAGGGTGGTCAAGAATGGCTG
GATACAAGGTGGAGATATCATTCATGGCAGCGGTGATAATGGTTGGTCAA
TCTATGGAGAAACATTTGAAGatGAAAATTACTCAGTATTACATTCGAAG
CGTGGCATCGTCGGCATGGCGAATAAAGGGCGGCACAGCAATTCTTCACA
ATTCTACATCACTTTTCAACCCGCCCCTTGGATGGATTGCCAATATGTTG
CTTTTGGGCAAGTGATTGAAGGTTTGGATACGTTAGCGAAAATGGAAGCA
CTCGACACTTACAATGAACGACCACtcaatatttgcaaaatcagCAATTG
TGGTGTGGTTGATATTAAGAAATGGGTCGATTCCATGTGAATGGGTGCTG
AAAAGCATAAGATTTGGGTGTATGGAATGGTAACCGATTTGAAATTCCAT
AAAGCTAAAGTAACAGCAGAGGGCTCATATCAGAAGAAACCCAATGAAGT
AGACCCACCTATTGTCAAATCCATGCTCGAGCATGAATGGCTTGAATTTA
TTGATGACTACAAGAAGaGTTCCGGAGGATCGTTAATGTCATATACCGAA
ACCACTTTGGTAACCGTGAATGGAAACGAGTTTGTTGGAAGAGCTGACGA
CTTTATCATATTTTGCTCACAGCATTATGAGTTCAAAGACCTTAGgCCAG
AACCATTATTTGAAGCAATGGCACGTATGGAGTACGAGGAACTATTACAA
TCAAGAAAGCATGATCTTGTTCATTTTGATATTCGAGTTGGTGAAGAAGA
GATCGGTAAAATGTTGATTGAGCTGTACAACGACATGGTGCCAACGACGT
GTGCCAACTTCAAACAATTGTGTATTGGTGATCGCAAATCCGTCATCAAG
AATGATCCTACACCATGGCATTTGAAATATGAGAATTCGGTCTTCCATAG
GGTGGTCAAGAATGGCTGGATACAAGGTGGAGATATCATTCATGGCAGCG
GTGATAATGGTTGGTCAATCTATGGAGAAACATTTGAAGatGAAAATTAC
TCAGTATTACATTCGAAGCGTGGCATCGTCGGCATGGCGAATAAAGGGCG
GCACAGCAATTCTTCACAATTCTACATCACTTTTCAACCCGCCCCTTGGA
TGGATTGCCAATATGTTGCTTTTGGGCAAGTGATTGAAGGTTTGGATACG
TTAGCGAAAATGGAAGCACTCGACACTTACAATGAACGACCACtcaatat
ttgcaaaatcagCAATTGTGGTGTGGTTGATATTAAGAAATGGGTCGATT
CCATGTGAATGGGTGCTGAAAAGCATAAGATTTGGGTGTATGGAATGGTA
ACCGATTTGAAATTCCATAAAGCTAAAGTAACAGCAGAGGGCTCATATCA
GAAGAAACCCAATGAAGTAGACCCACCTATTGTCAAATCCATGCTCGAGC
ATGAATGGCTTGAATTTATTGATGACTACAAGAAGaGTTCCGGAGGATCG
TTAATGTCATATACCGAAACCACTTTGGTAACCGTGAATGGAAACGAGTT
TGTTGGAAGAGCTGACGACTTTATCATATTTTGCTCACAGCATTATGAGT
TCAAAGACCTTAGgCCAGAACCATTATTTGAAGCAATGGCACGTATGGAG
TACGAGGAACTATTACAATCAAGAAAGCATGATCTTGTTCATTTTGATAT
TCGAGTTGGTGAAGAAGAGATCGGTAAAATGTTGATTGAGCTGTACAACG
ACATGGTGCCAACGACGTGTGCCAACTTCAAACAATTGTGTATTGGTGAT
CGCAAATCCGTCATCAAGAATGATCCTACACCATGGCATTTGAAATATGA
GAATTCGGTCTTCCATAGGGTGGTCAAGAATGGCTGGATACAAGGTGGAG
ATATCATTCATGGCAGCGGTGATAATGGTTGGTCAATCTATGGAGAAACA
TTTGAAGatGAAAATTACTCAGTATTACATTCGAAGCGTGGCATCGTCGG
CATGGCGAATAAAGGGCGGCACAGCAATTCTTCACAATTCTACATCACTT
TTCAACCCGCCCCTTGGATGGATTGCCAATATGTTGCTTTTGGGCAAGTG
ATTGAAGGTTTGGATACGTTAGCGAAAATGGAAGCACTCGACACTTACAA
TGAACGACCACtcaatatttgcaaaatcagCAATTGTGGTGTGGTTGATA
TTAAGAAATGGGTCGATTCCATGTGAATGGGTGCTGAAAAGCATAAGATT
TGGGTGTATGGAATGGTAACCGATTTGAAATTCCATAAAGCTAAAGTAAC
AGCAGAGGGCTCATATCAGAAGAAACCCAATGAAGTAGACCCACCTATTG
TCAAATCCATGCTCGAGCATGAATGGCTTGAATTTATTGATGACTACAAG
AAGaGTTCCGGAGGATCGTTAATGTCATATACCGAAACCACTTTGGTAAC
CGTGAATGGAAACGAGTTTGTTGGAAGAGCTGACGACTTTATCATATTTT
GCTCACAGCATTATGAGTTCAAAGACCTTAGgCCAGAACCATTATTTGAA
GCAATGGCACGTATGGAGTACGAGGAACTATTACAATCAAGAAAGCATGA
TCTTGTTCATTTTGATATTCGAGTTGGTGAAGAAGAGATCGGTAAAATGT
TGATTGAGCTGTACAACGACATGGTGCCAACGACGTGTGCCAACTTCAAA
CAATTGTGTATTGGTGATCGCAAATCCGTCATCAAGAATGATCCTACACC
ATGGCATTTGAAATATGAGAATTCGGTCTTCCATAGGGTGGTCAAGAATG
GCTGGATACAAGGTGGAGATATCATTCATGGCAGCGGTGATAATGGTTGG
TCAATCTATGGAGAAACATTTGAAGatGAAAATTACTCAGTATTACATTC
GAAGCGTGGCATCGTCGGCATGGCGAATAAAGGGCGGCACAGCAATTCTT
CACAATTCTACATCACTTTTCAACCCGCCCCTTGGATGGATTGCCAATAT
GTTGCTTTTGGGCAAGTGATTGAAGGTTTGGATACGTTAGCGAAAATGGA
AGCACTCGACACTTACAATGAACGACCACtcaatatttgcaaaatcagCA
ATTGTGGTGTGGTTGATATTAAGAAATGGGTCGATTCCATGTGAATGGGT
GCTGAAAAGCATAAGATTTGGGTGTATGGAATGGTAACCGATTTGAAATT
CCATAAAGCTAAAGTAACAGCAGAGGGCTCATATCAGAAGAAACCCAATG
AAGTAGACCCACCTATTGTCAAATCCATGCTCGAGCATGAATGGCTTGAA
TTTATTGATGACTACAAGAAGaGTTCCGGAGGATCGTTAATGTCATATAC
CGAAACCACTTTGGTAACCGTGAATGGAAACGAGTTTGTTGGAAGAGCTG
ACGACTTTATCATATTTTGCTCACAGCATTATGAGTTCAAAGACCTTAGg
CCAGAACCATTATTTGAAGCAATGGCACGTATGGAGTACGAGGAACTATT
ACAATCAAGAAAGCATGATCTTGTTCATTTTGATATTCGAGTTGGTGAAG
AAGAGATCGGTAAAATGTTGATTGAGCTGTACAACGACATGGTGCCAACG
ACGTGTGCCAACTTCAAACAATTGTGTATTGGTGATCGCAAATCCGTCAT
CAAGAATGATCCTACACCATGGCATTTGAAATATGAGAATTCGGTCTTCC
ATAGGGTGGTCAAGAATGGCTGGATACAAGGTGGAGATATCATTCATGGC
AGCGGTGATAATGGTTGGTCAATCTATGGAGAAACATTTGAAGatGAAAA
TTACTCAGTATTACATTCGAAGCGTGGCATCGTCGGCATGGCGAATAAAG
GGCGGCACAGCAATTCTTCACAATTCTACATCACTTTTCAACCCGCCCCT
TGGATGGATTGCCAATATGTTGCTTTTGGGCAAGTGATTGAAGGTTTGGA
TACGTTAGCGAAAATGGAAGCACTCGACACTTACAATGAACGACCACtca
atatttgcaaaatcagCAATTGTGGTGTGGTTGATATTAAGAAATGGGTC
GATTCCATGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007527XLOC_007527Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013469-exon-sc0000168-1491911889:359410..359525TCONS_00013469-exon-sc0000168-1491911889:359410..359525Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1510915933:359410..359525TCONS_00013469-exon-sc0000168-1510915933:359410..359525Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1575043694:359410..359525TCONS_00013469-exon-sc0000168-1575043694:359410..359525Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1491911889:359905..360000TCONS_00013469-exon-sc0000168-1491911889:359905..360000Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1510915933:359905..360000TCONS_00013469-exon-sc0000168-1510915933:359905..360000Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1575043694:359905..360000TCONS_00013469-exon-sc0000168-1575043694:359905..360000Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1491911889:360329..360456TCONS_00013469-exon-sc0000168-1491911889:360329..360456Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1510915933:360329..360456TCONS_00013469-exon-sc0000168-1510915933:360329..360456Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1575043694:360329..360456TCONS_00013469-exon-sc0000168-1575043694:360329..360456Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1491911889:360587..360650TCONS_00013469-exon-sc0000168-1491911889:360587..360650Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1510915933:360587..360650TCONS_00013469-exon-sc0000168-1510915933:360587..360650Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1575043694:360587..360650TCONS_00013469-exon-sc0000168-1575043694:360587..360650Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1491911889:360954..361016TCONS_00013469-exon-sc0000168-1491911889:360954..361016Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1510915933:360954..361016TCONS_00013469-exon-sc0000168-1510915933:360954..361016Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1575043694:360954..361016TCONS_00013469-exon-sc0000168-1575043694:360954..361016Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1491911889:367356..367515TCONS_00013469-exon-sc0000168-1491911889:367356..367515Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1510915933:367356..367515TCONS_00013469-exon-sc0000168-1510915933:367356..367515Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1575043694:367356..367515TCONS_00013469-exon-sc0000168-1575043694:367356..367515Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1491911889:368770..368826TCONS_00013469-exon-sc0000168-1491911889:368770..368826Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1510915933:368770..368826TCONS_00013469-exon-sc0000168-1510915933:368770..368826Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1575043694:368770..368826TCONS_00013469-exon-sc0000168-1575043694:368770..368826Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1491911889:369279..369414TCONS_00013469-exon-sc0000168-1491911889:369279..369414Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1510915933:369279..369414TCONS_00013469-exon-sc0000168-1510915933:369279..369414Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1575043694:369279..369414TCONS_00013469-exon-sc0000168-1575043694:369279..369414Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1491911889:369706..370345TCONS_00013469-exon-sc0000168-1491911889:369706..370345Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1510915933:369706..370345TCONS_00013469-exon-sc0000168-1510915933:369706..370345Clytia hemisphaericaexon
TCONS_00013469-exon-sc0000168-1575043694:369706..370345TCONS_00013469-exon-sc0000168-1575043694:369706..370345Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013469-proteinTCONS_00013469-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168supercontigsc0000168:359410..370345 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
69.0838	62.279	233.537	253.391	70.0637	53.6729	52.7585	55.2288	44.3547	36.7651	40.2248	34.1671	15.1454	14.3184	12.6412	16.1755	14.5194	15.231	12.33	14.4483	14.0937	14.8455	23.7045	21.2256	83.5503	71.2513	14.4658	11.2467	14.2275	14.4315
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
Blast
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BLAST of TCONS_00013469 vs. Swiss-Prot (Human)
Match: PPIL6 (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 1.653e-78
Identity = 121/288 (42.01%), Postives = 183/288 (63.54%), Query Frame = 3 
Query:   54 KIWVYGMVTDLKFHKAKVTAEGSYQKKPNEVDPPIVKSMLEHEWLEFIDDYKKSSGGSLMSYTETTLVTVNGNEFVGRADDFIIFCSQHYEFKDLRPEPLFEAMARMEYEELLQSRKHDLVHFDIRVGEEEIGKMLIELYNDMVPTTCANFKQLCIGDRKSVIKNDPTPWHLKYENSVFHRVVKNGWIQGGDIIHGSGDNGWSIYGETFEDENYSVLHSKRGIVGMANKGRHSNSSQFYITFQPAPWMDCQYVAFGQVIEGLDTLAKMEALDTYNERPLNICKISNCG 917
            ++ V G+ +   F  AK  AE      P++ + PI+  + E  W +++ + K+        Y+ + +  VNG +F+G A D   +  + ++  D++P  L++A+      + L+  KHD V  DI +    IG+++ ELY D+ P TC NF+ LC G      +       L Y+NS+FHR+V+NGWIQGGDI++G GDNG SIYG TFEDEN+SV H+KRG++GMANKGRHSN SQFYIT Q  P++D ++VAFGQ+IEG + L ++E + T NERP+++C+I++ G
Sbjct:   25 QVKVVGLFSCPNFQIAKSAAENLKNNHPSKFEDPILVPLQEFAWHQYLQEKKRELKNETWEYSSSVISFVNG-QFLGDALDLQKWAHEVWDIVDIKPSALYDALTEDFSAKFLRDTKHDFVFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRG----IRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNERPIHMCRITDSG 307
The following BLAST results are available for this feature:
BLAST of TCONS_00013469 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIL61.653e-7842.01Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
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