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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013461 ID=TCONS_00013461|Name=TCONS_00013461|organism=Clytia hemisphaerica|type=transcript|length=1704bp
ctgaaaatgaaagtaaaattggcccgcactccaaatcccataatcttgat
ataggagtttaagcatAGACTGATAAGACAGCAAAATGCagtgaaataaa
aaagtaaacaaacctgaaCCTTTTGTCTGTcctaataaagaaaatattct
agcTGTAGTAATGTTTACATCCAGAAATAAATTCATATAATAAATTCAAA
ACCATACTGCAACATTGCTGGTAATGgatttgaacttgaaaaatgtGGGT
TCAGTTCCTTGGAAAAGGTCTAATTACACTTCCAaatgaattatttttac
aaTAACATGAAAGACATGATGAAAGCTGCTCACTaaaaaattctgattgg
ctaatAGCTATGCCGTCATTTTTCTCTGCGCCTTACGCAGCCCTGTATTG
ATTTTTTCATACGTCTTGAAATTCTCATACACCTTCATAAATTTTCAGAC
GCCTTCATTTTTTGTGCACCTTCATTAATTTATGctttatttttatgaaa
taacgAGTTCTATAAGAGTTGgtaaaaagtaaacaagggatggctcATAA
TAGgaacatttatttttcaattaagcagagtacactttataagaattaga
TCAATAGCTCTTGATGCATGAAGGTAAAACGATGTAATGTAGGAATATTA
TAGTGATTGTATATTTTTATCCTGTAATACATAATATTACTTGATTCCAT
GTTTGACATAAATGTTGACACcttgttgaaaatttgacaaaaatattgac
agaataaCAAAATGTGATGGTGTACGTTGCAAGCACGTGAGAAAAATGCA
CAATGTATGTATGTTACTTTAACGTTGCATTGTAGCCCTCTGGAACAAAC
ATCAGTGTAACCTTAGCTTaagcaaagattttcaaaaactagGTATCATA
CCTTGTGGACtcttagaaaaaataactctTTAACTAAATCTTGATCAAAC
TTTAGGATGCAAATTTTACAAAGAAATTTATTATACATAGCAAGATACAC
TCGATTAAGACAATCCATTTTAAATACTGGAGCTCTTACACGATATGGTT
CAATTCCAATATTCAACCAATTTAAAAAGAGTTGTCTGCTACATACTACA
TCCAGATGTACCAAAGAGCTTTATACTATTGATAAACCTTTCAAATATAT
TTCTCAAGCTTTAAAAGTTCTGTCACAGATGCGAACGATAGACACAGACT
ttgatgaatttgaatttctagaTGGAACAAGACAAGCTATAATGCATGTG
ACTGAAAATTTAGCTGAAGGTAACTTTGACAAATTGGAGGATCTTACTTC
CACTGAGGGCTTAGAAATCCTCAAAGAACTCTATCACGAGAGAGCTGAAA
ATTCATCAAGTTTAAAAGTTCAAGGTGAGGACATAATAGTTGTGGTACCT
GTTGGTCTTGTTCAAGACGACCAAAACTTTGTCAGTGTTTTGGTAGATTG
CTGCTGCAGAGAACCAAGAATTGTTAGATGCTCTTTTCGTCGAAATTTTG
AATTACAGCAAGGTTGGCTGGTTGATTCTTTGCATTATTCAAAGTGAATC
TGAGTGAATAGgaaattgatcaaaattttgtaaataagaTTTTATATTAA
AGAAAGTACaatataaattgtttttttttcttcattggaACCATAAAGGT
TCTAGTTCTATGTCTTAAAAAGAGAACATTGCCAGATCTATTGTTGAAAG
ATAA Run BLAST on NCBI transcript from alignment at sc0000168:193161..194864+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013461 ID=TCONS_00013461|Name=TCONS_00013461|organism=Clytia hemisphaerica|type=transcript|length=1704bp|location=Sequence derived from alignment at sc0000168:193161..194864+ (Clytia hemisphaerica)
ctgaaaatgaaagtaaaattggcccgcactccaaatcccataatcttgat
ataggagtttaagcatAGACTGATAAGACAGCAAAATGCagtgaaataaa
aaagtaaacaaacctgaaCCTTTTGTCTGTcctaataaagaaaatattct
agcTGTAGTAATGTTTACATCCAGAAATAAATTCATATAATAAATTCAAA
ACCATACTGCAACATTGCTGGTAATGgatttgaacttgaaaaatgtGGGT
TCAGTTCCTTGGAAAAGGTCTAATTACACTTCCAaatgaattatttttac
aaTAACATGAAAGACATGATGAAAGCTGCTCACTaaaaaattctgattgg
ctaatAGCTATGCCGTCATTTTTCTCTGCGCCTTACGCAGCCCTGTATTG
ATTTTTTCATACGTCTTGAAATTCTCATACACCTTCATAAATTTTCAGAC
GCCTTCATTTTTTGTGCACCTTCATTAATTTATGctttatttttatgaaa
taacgAGTTCTATAAGAGTTGgtaaaaagtaaacaagggatggctcATAA
TAGgaacatttatttttcaattaagcagagtacactttataagaattaga
TCAATAGCTCTTGATGCATGAAGGTAAAACGATGTAATGTAGGAATATTA
TAGTGATTGTATATTTTTATCCTGTAATACATAATATTACTTGATTCCAT
GTTTGACATAAATGTTGACACcttgttgaaaatttgacaaaaatattgac
agaataaCAAAATGTGATGGTGTACGTTGCAAGCACGTGAGAAAAATGCA
CAATGTATGTATGTTACTTTAACGTTGCATTGTAGCCCTCTGGAACAAAC
ATCAGTGTAACCTTAGCTTaagcaaagattttcaaaaactagGTATCATA
CCTTGTGGACtcttagaaaaaataactctTTAACTAAATCTTGATCAAAC
TTTAGGATGCAAATTTTACAAAGAAATTTATTATACATAGCAAGATACAC
TCGATTAAGACAATCCATTTTAAATACTGGAGCTCTTACACGATATGGTT
CAATTCCAATATTCAACCAATTTAAAAAGAGTTGTCTGCTACATACTACA
TCCAGATGTACCAAAGAGCTTTATACTATTGATAAACCTTTCAAATATAT
TTCTCAAGCTTTAAAAGTTCTGTCACAGATGCGAACGATAGACACAGACT
ttgatgaatttgaatttctagaTGGAACAAGACAAGCTATAATGCATGTG
ACTGAAAATTTAGCTGAAGGTAACTTTGACAAATTGGAGGATCTTACTTC
CACTGAGGGCTTAGAAATCCTCAAAGAACTCTATCACGAGAGAGCTGAAA
ATTCATCAAGTTTAAAAGTTCAAGGTGAGGACATAATAGTTGTGGTACCT
GTTGGTCTTGTTCAAGACGACCAAAACTTTGTCAGTGTTTTGGTAGATTG
CTGCTGCAGAGAACCAAGAATTGTTAGATGCTCTTTTCGTCGAAATTTTG
AATTACAGCAAGGTTGGCTGGTTGATTCTTTGCATTATTCAAAGTGAATC
TGAGTGAATAGgaaattgatcaaaattttgtaaataagaTTTTATATTAA
AGAAAGTACaatataaattgtttttttttcttcattggaACCATAAAGGT
TCTAGTTCTATGTCTTAAAAAGAGAACATTGCCAGATCTATTGTTGAAAG
ATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013461-exon-sc0000168-1491911889:193161..194864 | TCONS_00013461-exon-sc0000168-1491911889:193161..194864 | Clytia hemisphaerica | exon |
| TCONS_00013461-exon-sc0000168-1510915933:193161..194864 | TCONS_00013461-exon-sc0000168-1510915933:193161..194864 | Clytia hemisphaerica | exon |
| TCONS_00013461-exon-sc0000168-1575043694:193161..194864 | TCONS_00013461-exon-sc0000168-1575043694:193161..194864 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168 | supercontig | sc0000168:193161..194864 + |
Blast
The following BLAST results are available for this feature:
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