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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013381 ID=TCONS_00013381|Name=TCONS_00013381|organism=Clytia hemisphaerica|type=transcript|length=591bp
TATCATCATCACAAATATGAGGCACTATTCCTATCACTGTTATCCAACTT
GTCAGATTGTCAtactttgaaattgaatttccTCTATTTAGCTTATTTAA
TTTCTTACTTAGACAACATTTCAGGAGCCGTGCTTTCAATATGTGAGAGG
ACCTGCAATATTAGTTGAAAATTCTTCTTGCACTTATGGTAAatgagaaa
gtgaaaaatatgacTTATTTTAACTGCTTCTGCTTActagtttgttttta
atttgattgTCTTGCGTACTTTTAATTGTGATTTGTTACATTCTAGTAAA
TTTGTGTTCCTTTGAATGAACTACTATAGCATTTTAATCTACGTTTTGTT
GatacaatattttcaaattgaagaaaaagtttgaatCAAATATTTGTAAt
ctgatttatttatttttcactctAGTGATCAAGTGATTTATTTTGATGGA
TAATCAGCATTCAAAAGATGTCCAAATTGAAGAAATGCTGTTAACTGGAT
GCTGGACATTTATGTTGCCATACGTTGAAGTTCTTGAacgaaatttgaaa
tgataacaaCGTGATAATACTTCAAAAGACTGCCATCGGAG Run BLAST on NCBI transcript from alignment at sc0000167:246244..247533+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013381 ID=TCONS_00013381|Name=TCONS_00013381|organism=Clytia hemisphaerica|type=transcript|length=1290bp|location=Sequence derived from alignment at sc0000167:246244..247533+ (Clytia hemisphaerica)
TATCATCATCACAAATATGAGGCACTATTCCTATCACTGTTATCCAACTT
GTCAGATTGTCAtactttgaaattgaatttccTCTATTTAGCTTATTTAA
TTTCTTACTTAGACAACATTTCAGGAGCCGTGCTTTCAATATGTGAGAGG
ACCTGCAATATTAGTTGAAAATTCTTCTTGCACTTATGGTAAatgagaaa
gtgaaaaatatgacTTATTTTAACTGCTTCTGCTTActagtttgttttta
atttgattgTCTTGCGTACTTTTAATTGTGATTTGTTACATTCTAGTAAA
TTTGTGTTCCTTTGAATGAACTACTATAGCATTTTAATCTACGTTTTGTT
GatacaatattttcaaattgaagaaaaagtttgaatCAAATATTTGTAAt
ctgatttatttatttttcactctAGTGATCAAGTGATTTATTTTGATGGA
TAATCAGCATTCAAAAGATGTCCAAATTGAAGAAATGGTAAAATTATTGT
TTCTTGGCTTTAATGGAATATTACATTCTGCTGGGGGTCTCAAAAGGGGG
TggcaaatgtttcatttcaggGAGATTCTGAAAAGGAGAAAGAAGGAGAG
CATGGGAAAAAAGTTCTGACAAAGCTCATACCATTTGCAGCAAATTTATT
ACTTAGCAGTTGAAAAATCGTGCATTATTGGTTTTAACTTACAAAGGGCT
GAATCACTTTCTAAAAAGTATGcatatttttaacaaaatttaagaataat
ggGCTAAACGTCTCAGAGGGAGGGGCAAAAGATGTTTCCATTTTCTGGTT
TGGAAGGTAATTTTTTGGTTTACAGACATTGGAAAGGAACCTTTAGACCG
gatgaaggaaaaaaaaaattaaaattgaatttttttttttttcaaacttg
aattaatggttgagaaaataaaagaaatgtgttTTGAGATACCAGAAAAC
AACGAAAGTTTTGTAGTAGTTAACTTGTGTTAAGGGTGCCATTAAGGAAA
GCATACAATATTGGAGAGCTTTTGTTATTCCTTTCTATCGCATCATACCA
TATCATCCGATACGATCAGTTCCATTGATATCCTGTGTGGCATTCTTGGT
AGAATATTAAAACTATCCATCATAACGCCTGCTTTTAACCATGCAGATCA
TGGCTTATGATTGAAGCAATTCCCTTTCCATTTTAGCTGTTAACTGGATG
CTGGACATTTATGTTGCCATACGTTGAAGTTCTTGAacgaaatttgaaat
gataacaaCGTGATAATACTTCAAAAGACTGCCATCGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013381-exon-sc0000167-1491911889:246244..246730 | TCONS_00013381-exon-sc0000167-1491911889:246244..246730 | Clytia hemisphaerica | exon |
| TCONS_00013381-exon-sc0000167-1510915933:246244..246730 | TCONS_00013381-exon-sc0000167-1510915933:246244..246730 | Clytia hemisphaerica | exon |
| TCONS_00013381-exon-sc0000167-1575043694:246244..246730 | TCONS_00013381-exon-sc0000167-1575043694:246244..246730 | Clytia hemisphaerica | exon |
| TCONS_00013381-exon-sc0000167-1491911889:247430..247533 | TCONS_00013381-exon-sc0000167-1491911889:247430..247533 | Clytia hemisphaerica | exon |
| TCONS_00013381-exon-sc0000167-1510915933:247430..247533 | TCONS_00013381-exon-sc0000167-1510915933:247430..247533 | Clytia hemisphaerica | exon |
| TCONS_00013381-exon-sc0000167-1575043694:247430..247533 | TCONS_00013381-exon-sc0000167-1575043694:247430..247533 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000167 | supercontig | sc0000167:246244..247533 + |
Blast
The following BLAST results are available for this feature:
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