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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013266 ID=TCONS_00013266|Name=TCONS_00013266|organism=Clytia hemisphaerica|type=transcript|length=2006bp
TcgcttttgttttgataaagttGACAAACTTATAGAATTACAAAATGATT
GCTAGCCAAAAATACACCTATCAAACTTATCAAAgtattttgcttggctg
ggatttaGAAACTTACTCATGCTTTTGTGTGAAGCTCGTTTTAGGGCGTT
GCAGTCCTgctaaaaataggcaaaaagagcgacaaatttcataaaaaacg
acaaatgtCAAATGTTTACTAGAACCAAAGCCATGATTTAGGAACTTGCG
CCATGgtttatataaagctcagtgGTACTAACAACGAATTTCAACGTCAA
TCTTTTCTGGTAAATTCTGATCCAGTCTCCACAAGTTTAAGCCCACGTTG
ACATGCTACTTacgttccgtttcgctccgaaatgaaatgaagtcattcta
ttggttacattcaagtgttacgtcacttctaaccaatagaatggcttcat
tctgTTTCGGAAacgctccgaaacgaaacggttctgGAGGAACACTATGT
Ggatttaagatttttgaaacgtcaaaaaaacattgacgttacaaagcaaa
acagattgaaacggtttcgctccacttttttcatcggaatgGAACTGCcc
cgttttcttgctccaaaACGTTCCGAAACAAATATGAACATACTcaatcc
gtaacgaaaatcatatcGGAGCGAAACgaaacagtaacgtgtgaacatgg
tcatAGTGTATTTAAGATTTTCGAagcgtcaaaaaagaagaccttACAAA
GCAAAAAATTCATTGGAACGGGCTGCTCCGTTGCTCCGTTTCGGAGATGC
Ctcggagtttttacaagatacttcactaattggtcatttaaagtgataga
gaaagcgttctttagaaaaagtaataagattcttttattacatcttaacg
accaaccaaatcaaataagagcttgtaaaaactccagcttgtcccccgTT
TCGTTGCTCTGAAAGGTTCCGACATTAGTATGAACACTTCTTATCCATAA
TAAATACCATACCGGAGCGATACGAAACCGCAACATCTGAATATGGTCTT
TTATTGGTTATATTAGGCTGATTTCAAAATAGCAAGCGTCcataacatcc
atataacgtttaTTGAATGGAACACGACGACATGCGATCTTCGTCTCTCA
AAAAACTTCCCCCATGATTCCTCATATTGCGATTTTTCTGTTCAAGTTCA
GCCTGTTGTCTGAATTCTCTCACACGCTTTTTCAAGTTGTCGTATTTTGT
TTTCGTTTTATCCAAATGGTCACGCGCTTCAACTAAATCTTTAAGCGCTT
TACATACCGTACCACAATAACATGTGCACTCAGGTCTTTTACTTGATGGT
TCTTCTAAATGCCATACGGGTGGtgattgattttcttctttcaagCGATG
TATTTCTTTGGAATGAGTTAATTCTAATTCATGAATTTTCTTCTCTAATT
TTGAATTCATAATCTGTGTTTCATTAAGCTGCTTCACTAGCTCAGTATGC
CGAGCTTCCTCTTCCCGCTCTTGTTCTTCATCGTCCGCGCGGCCGTTCAA
TTTGTTGTTTTCGATGAATAGACGTAAGCGGGCGATTTCTTCATCACGTG
ATACCAGCATACGTTTTGATTCGCTCATTGCTGCTTCTAGCTCTTTTATA
CTCTCTTTAATCAAATCCTCTGTTATATTTTCCGacgatttcaaatttga
aattgatcCACGCCACATTTGGTCAATGTCCAATAAAGAAGCAAATGTCT
TATTAccgccgccattttgaatttgtcGTTTCGAGCTTTTAGCATTCGAT
TTTTGTAACGGACTTCCTTTAAAGGCTTCAAACTCCATCGTGTGAATAAA
ATTCGATGCAGGTTTTTGTCCCACAAAACTCCAcggaaaaagaattttta
ttgaTGAGATTTCTCCAATACTCTTTTTTTCAAAGACTCGATTTTTGATG
TCTTCGAATGCTCGAAATTTAGGTTTTCCACAAAATACTTTTCGTCCTTC
TTTAAC Run BLAST on NCBI protein sequence of TCONS_00013266-protein >TCONS_00013266-protein ID=TCONS_00013266-protein|Name=TCONS_00013266-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
VKEGRKVFCGKPKFRAFEDIKNRVFEKKSIGEISSIKILFPWSFVGQKPA
SNFIHTMEFEAFKGSPLQKSNAKSSKRQIQNGGGNKTFASLLDIDQMWRG
SISNLKSSENITEDLIKESIKELEAAMSESKRMLVSRDEEIARLRLFIEN
NKLNGRADDEEQEREEEARHTELVKQLNETQIMNSKLEKKIHELELTHSK
EIHRLKEENQSPPVWHLEEPSSKRPECTCYCGTVCKALKDLVEARDHLDK
TKTKYDNLKKRVREFRQQAELEQKNRNMRNHGGSFLRDEDRMSSCSIQ Run BLAST on NCBI transcript from alignment at sc0000163:262980..264985 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013266 ID=TCONS_00013266|Name=TCONS_00013266|organism=Clytia hemisphaerica|type=transcript|length=2006bp|location=Sequence derived from alignment at sc0000163:262980..264985 (Clytia hemisphaerica)
GTTAAAGAAGGACGAAAAGTATTTTGTGGAAAACCTAAATTTCGAGCATT
CGAAGACATCAAAAATCGAGTCTTTGAAAAAAAGAGTATTGGAGAAATCT
CAtcaataaaaattctttttccgTGGAGTTTTGTGGGACAAAAACCTGCA
TCGAATTTTATTCACACGATGGAGTTTGAAGCCTTTAAAGGAAGTCCGTT
ACAAAAATCGAATGCTAAAAGCTCGAAACgacaaattcaaaatggcggcg
gTAATAAGACATTTGCTTCTTTATTGGACATTGACCAAATGTGGCGTGga
tcaatttcaaatttgaaatcgtCGGAAAATATAACAGAGGATTTGATTAA
AGAGAGTATAAAAGAGCTAGAAGCAGCAATGAGCGAATCAAAACGTATGC
TGGTATCACGTGATGAAGAAATCGCCCGCTTACGTCTATTCATCGAAAAC
AACAAATTGAACGGCCGCGCGGACGATGAAGAACAAGAGCGGGAAGAGGA
AGCTCGGCATACTGAGCTAGTGAAGCAGCTTAATGAAACACAGATTATGA
ATTCAAAATTAGAGAAGAAAATTCATGAATTAGAATTAACTCATTCCAAA
GAAATACATCGcttgaaagaagaaaatcaatcaCCACCCGTATGGCATTT
AGAAGAACCATCAAGTAAAAGACCTGAGTGCACATGTTATTGTGGTACGG
TATGTAAAGCGCTTAAAGATTTAGTTGAAGCGCGTGACCATTTGGATAAA
ACGAAAACAAAATACGACAACTTGAAAAAGCGTGTGAGAGAATTCAGACA
ACAGGCTGAACTTGAACAGAAAAATCGCAATATGAGGAATCATGGGGGAA
GTTTTTTGAGAGACGAAGATCGCATGTCGTCGTGTTCCATTCAAtaaacg
ttatatggatgttatgGACGCTTGCTATTTTGAAATCAGCCTAATATAAC
CAATAAAAGACCATATTCAGATGTTGCGGTTTCGTATCGCTCCGGTATGG
TATTTATTATGGATAAGAAGTGTTCATACTAATGTCGGAACCTTTCAGAG
CAACGAAAcgggggacaagctggagtttttacaagctcttatttgatttg
gttggtcgttaagatgtaataaaagaatcttattactttttctaaagaac
gctttctctatcactttaaatgaccaattagtgaagtatcttgtaaaaac
tccgaGGCATCTCCGAAACGGAGCAACGGAGCAGCCCGTTCCAATGAATT
TTTTGCTTTGTaaggtcttcttttttgacgctTCGAAAATCTTAAATACA
CTatgaccatgttcacacgttactgtttcGTTTCGCTCCgatatgatttt
cgttacggattgAGTATGTTCATATTTGTTTCGGAACGTtttggagcaag
aaaacgggGCAGTTCcattccgatgaaaaaagtggagcgaaaccgtttca
atctgttttgctttgtaacgtcaatgtttttttgacgtttcaaaaatctt
aaatcCACATAGTGTTCCTCcagaaccgtttcgtttcggagcgtTTCCGA
AAcagaatgaagccattctattggttagaagtgacgtaacacttgaatgt
aaccaatagaatgacttcatttcatttcggagcgaaacggaacgtAAGTA
GCATGTCAACGTGGGCTTAAACTTGTGGAGACTGGATCAGAATTTACCAG
AAAAGATTGACGTTGAAATTCGTTGTTAGTACcactgagctttatataaa
cCATGGCGCAAGTTCCTAAATCATGGCTTTGGTTCTAGTAAACATTTGac
atttgtcgttttttatgaaatttgtcgctctttttgcctatttttagcAG
GACTGCAACGCCCTAAAACGAGCTTCACACAAAAGCATGAGTAAGTTTCt
aaatcccagccaagcaaaatacTTTGATAAGTTTGATAGGTGTATTTTTG
GCTAGCAATCATTTTGTAATTCTATAAGTTTGTCaactttatcaaaacaa
aagcgA Coding sequence (CDS) from alignment at sc0000163:262980..264985 >TCONS_00013266 ID=TCONS_00013266|Name=TCONS_00013266|organism=Clytia hemisphaerica|type=CDS|length=897bp|location=Sequence derived from alignment at sc0000163:262980..264985 (Clytia hemisphaerica)
GTTAAAGAAGGACGAAAAGTATTTTGTGGAAAACCTAAATTTCGAGCATT
CGAAGACATCAAAAATCGAGTCTTTGAAAAAAAGAGTATTGGAGAAATCT
CAtcaataaaaattctttttccgTGGAGTTTTGTGGGACAAAAACCTGCA
TCGAATTTTATTCACACGATGGAGTTTGAAGCCTTTAAAGGAAGTCCGTT
ACAAAAATCGAATGCTAAAAGCTCGAAACgacaaattcaaaatggcggcg
gTAATAAGACATTTGCTTCTTTATTGGACATTGACCAAATGTGGCGTGga
tcaatttcaaatttgaaatcgtCGGAAAATATAACAGAGGATTTGATTAA
AGAGAGTATAAAAGAGCTAGAAGCAGCAATGAGCGAATCAAAACGTATGC
TGGTATCACGTGATGAAGAAATCGCCCGCTTACGTCTATTCATCGAAAAC
AACAAATTGAACGGCCGCGCGGACGATGAAGAACAAGAGCGGGAAGAGGA
AGCTCGGCATACTGAGCTAGTGAAGCAGCTTAATGAAACACAGATTATGA
ATTCAAAATTAGAGAAGAAAATTCATGAATTAGAATTAACTCATTCCAAA
GAAATACATCGcttgaaagaagaaaatcaatcaCCACCCGTATGGCATTT
AGAAGAACCATCAAGTAAAAGACCTGAGTGCACATGTTATTGTGGTACGG
TATGTAAAGCGCTTAAAGATTTAGTTGAAGCGCGTGACCATTTGGATAAA
ACGAAAACAAAATACGACAACTTGAAAAAGCGTGTGAGAGAATTCAGACA
ACAGGCTGAACTTGAACAGAAAAATCGCAATATGAGGAATCATGGGGGAA
GTTTTTTGAGAGACGAAGATCGCATGTCGTCGTGTTCCATTCAAtaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013266-exon-sc0000163-1491911889:262980..264985 | TCONS_00013266-exon-sc0000163-1491911889:262980..264985 | Clytia hemisphaerica | exon |
| TCONS_00013266-exon-sc0000163-1510915933:262980..264985 | TCONS_00013266-exon-sc0000163-1510915933:262980..264985 | Clytia hemisphaerica | exon |
| TCONS_00013266-exon-sc0000163-1575043694:262980..264985 | TCONS_00013266-exon-sc0000163-1575043694:262980..264985 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000163 | supercontig | sc0000163:262980..264985 . |
Blast
The following BLAST results are available for this feature:
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