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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013214 ID=TCONS_00013214|Name=TCONS_00013214|organism=Clytia hemisphaerica|type=transcript|length=1166bp
attttaaattaaaaagtgCCACACTGTATTTACATTCTATCATTTGACAA
CCATAATTTAGTTTTTTCCATTTATCActctttattgaaaatttgtgtaa
ctttctttttgtattcttaatgaagaaaaaaaatccaattttacaAAATG
GAACCAAGTATTGCAAGAAAAGGCATCAAGGATAGTGAAAAAGTGTATCA
AATATTCCAACAACTTTTATCTACTGTTGGAAAGGGAAATCTTATGTATG
ATAAGAAGATAGACGCAGACCCTGCTTCTGTCCATGTGAAGTGtgaagaa
aataacaaaaaagttgCTGAGATTCTTGAAANCCTGCTTCTGTCCATGTG
AAGTGtgaagaaaataacaaaaaagtcgCTGAGATTCTTGAAAGTCTAAA
GAAGGCACTTGCAGATACGAAAGAATGCTATCAACATTGCCAAAAAGAGA
TGGCTACTGCCAAAATgCCTTCAATTGAGGATATTGCAAAAGGAAACACA
AAAAAAGAGCCTGCTGGTGAACCATCTGAGGAgtacaaaactttaaaaaa
aCAATTACAGGCCAAAAATGAAGATCTACGAGTCATCATTGATGAAGTAC
GTCACATTTTCAGTGACATAAATCAGCTTAGTACAACGGTTCCTTATTGA
GCATTTTTGAATGGTCTTTTTCCTCATACAACATTTTGTTGAGTGGTGGT
AACTGTGTTGACGTTGTGGAAGCTGTGATGGCTGAGCCTGATGATACGGT
ATTGGAGATGCGAACCAATCCATCACCTATGAATTACTTGTATAATTAAT
GCAACACTAAGAAAATATTGACACAATTGTTTGTAAATCTTGCAAGTTTA
TAAACAGATATTTTGATAAGTTAAATGGTTACGACTGAATTGTGAAGTGT
TGGATTGCATGtttcaaatattcttttattGATTGCTTGATAATATCCAA
GATATGGTGAACATAGCAGTGGTAATCACAATGATATTCATAGAGCAGAA
TAATTGTAAGGCATTTGAGTTGGGAAGAAAATGTGAATTTATCTTTTGTA
ATTATAAGGTGACGATAGAAATGATTATTGTCTTATGATTATTTTCTACT
GCTCCCCAATGATTTCCTCAATTCTAATTCATACATAACACAAATGAGTG
ACAAATAATTACAACA Run BLAST on NCBI transcript from alignment at sc0000163:416283..418272+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013214 ID=TCONS_00013214|Name=TCONS_00013214|organism=Clytia hemisphaerica|type=transcript|length=1990bp|location=Sequence derived from alignment at sc0000163:416283..418272+ (Clytia hemisphaerica)
attttaaattaaaaagtgCCACACTGTATTTACATTCTATCATTTGACAA
CCATAATTTAGTTTTTTCCATTTATCActctttattgaaaatttgtgtaa
ctttctttttgtattcttaatgaagaaaaaaaatccaattttacaAAATG
GAACCAAGTATTGCAAGAAAAGGCATCAAGGATAGTGAAAAAGTGTATCA
AATATTCCAACAACTTTTATCTACTGTTGgtaagtttcaatttttttctt
tacaattgATGtaagtttattttgatttgatcaaatttttattgaaaaaa
aactaagaaaagtAGTAAATGTACAGTGTTTTATTTCGAAGATCTATTAA
ACAAATATTTGATACTATTTGAAACAATTTGCAAAAAATTAGTCCCATTA
AAATACAAATCAATAAGTTGttgttattattaaaaaatttctgttggagt
aattagttattcaaagaCCGTTGCATTTTCANTTGttgttattattaaaa
aatttctgctggagtaattagttattcaaagaCTGTCGCATTTTCCCGAA
AACTATATTTATTTAAAGGAAAGGGAAATCTTATGTATGATAAGAAGATA
GACGCAGACCCTGCTTCTGTCCATGTGAAGTGtgaagaaaataacaaaaa
agttgCTGAGATTCTTGAAANCCTGCTTCTGTCCATGTGAAGTGtgaaga
aaataacaaaaaagtcgCTGAGATTCTTGAAAGTCTAAAGAAGGCACTTG
CAGATACGAAAGAATGCTATCAACATTGCCAAAAAGAGATGGCTACTGCC
AAAATggtattgtttatttttttagtcTTAAAAATATTGTAATATTAGCT
GTCCACCCTTCCATTTAGGTTTTATTAAACAAAATATTGATATCTAATAT
AATCTTATAGTATTCAACCCTTTCTCTAATTATTTTCACTTCTGACAGAA
agataataatttttatttgataatcTTTGTTTTAGCCTTCAATTGAGGAT
ATTGCAAAAGGAAACACAAAAAAAGAGCCTGCTGGTGAACCATCTGAGGA
gtacaaaactttaaaaaaagtaattttttcacTGACAAACTTTCCGTACA
GGGTCTGAATTTTCACTCaatgtctttaaaaatgttGTCAGTGACAATCG
AATTGTGCTTTTGAGTTCTCAAATAATAATATACATGGCACACTATCACA
TAATCATTCACACCAGTAGCTAAGGGCAACTTAAAACCTGACATTATGAA
AAAACCACCTGACAATAGCACTAGCCAGGCAAAAATTGAGCAAATTTTTA
TTGAAGCAATATATTGTGATACAGTCACCAGAAATGATTCTGTGTGCTGT
TAAATTTGTATATCTTTCTTTCTAGCAATTACAGGCCAAAAATGAAGATC
TACGAGTCATCATTGATGAAGTACGTCACATTTTCAGTGACATAAATCAG
CTTAGTACAACGGTTCCTTATTGAGCATTTTTGAATGGTCTTTTTCCTCA
TACAACATTTTGTTGAGTGGTGGTAACTGTGTTGACGTTGTGGAAGCTGT
GATGGCTGAGCCTGATGATACGGTATTGGAGATGCGAACCAATCCATCAC
CTATGAATTACTTGTATAATTAATGCAACACTAAGAAAATATTGACACAA
TTGTTTGTAAATCTTGCAAGTTTATAAACAGATATTTTGATAAGTTAAAT
GGTTACGACTGAATTGTGAAGTGTTGGATTGCATGtttcaaatattcttt
tattGATTGCTTGATAATATCCAAGATATGGTGAACATAGCAGTGGTAAT
CACAATGATATTCATAGAGCAGAATAATTGTAAGGCATTTGAGTTGGGAA
GAAAATGTGAATTTATCTTTTGTAATTATAAGGTGACGATAGAAATGATT
ATTGTCTTATGATTATTTTCTACTGCTCCCCAATGATTTCCTCAATTCTA
ATTCATACATAACACAAATGAGTGACAAATAATTACAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013214-exon-sc0000163-1491911889:416283..416511 | TCONS_00013214-exon-sc0000163-1491911889:416283..416511 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1510915933:416283..416511 | TCONS_00013214-exon-sc0000163-1510915933:416283..416511 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1575043694:416283..416511 | TCONS_00013214-exon-sc0000163-1575043694:416283..416511 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1491911889:416851..417088 | TCONS_00013214-exon-sc0000163-1491911889:416851..417088 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1510915933:416851..417088 | TCONS_00013214-exon-sc0000163-1510915933:416851..417088 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1575043694:416851..417088 | TCONS_00013214-exon-sc0000163-1575043694:416851..417088 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1491911889:417268..417351 | TCONS_00013214-exon-sc0000163-1491911889:417268..417351 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1510915933:417268..417351 | TCONS_00013214-exon-sc0000163-1510915933:417268..417351 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1575043694:417268..417351 | TCONS_00013214-exon-sc0000163-1575043694:417268..417351 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1491911889:417658..418272 | TCONS_00013214-exon-sc0000163-1491911889:417658..418272 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1510915933:417658..418272 | TCONS_00013214-exon-sc0000163-1510915933:417658..418272 | Clytia hemisphaerica | exon |
| TCONS_00013214-exon-sc0000163-1575043694:417658..418272 | TCONS_00013214-exon-sc0000163-1575043694:417658..418272 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000163 | supercontig | sc0000163:416283..418272 + |
Blast
The following BLAST results are available for this feature:
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