TCONS_00013098 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013098
Unique NameTCONS_00013098
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2849

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013098 ID=TCONS_00013098|Name=TCONS_00013098|organism=Clytia hemisphaerica|type=transcript|length=2849bp
caataacaattttACCTCGAAATTGGATATATGTCCCCTAAAAATAATAC
TGCGGCGGAGAAGTACTTATGAAGTGGCGATTGAAATAtggaaaacaata
aaaatagaaGCAATCCTACAGAGGGTCAACAGCTTTTACAGACTGAAAAC
TGCAACAGAGGGGAGAGTCATACACGCAGCAAAATGAGGAATAGCAAGAT
TTTCAAAGAGATTGTGAGCCTTCTATACTGGACCATGTTGGCGGCTTGTA
CAGTGGGGCCGGGAACCGTAGTCACTTGCGCAAGGGCCGGTGCTGAATTT
GATTTGAACTTGATTTGGGCGTTGATTTTTGCTTCCATTCTCTCATATAC
TTTGCAAGAAGGTACAGCAAGACTGACAATAAAAAGTGGTAAAAGCCTTG
GTCAATGTCTTCAAGCAAAATATAAACATGGTCGACTGATATGGGGCGTG
GGCGTTATTTGCTGGGTGGTGGCGGTCTGTGTATTTCTTGGAAACACTTT
TTATTCATGCAACAACTGGGCAGGTGGCATGTCCGCCATCTACGCACTAC
CCGGTGCTGGAAATACGGTCGGACTACGTGTTGGTGCTTGTTTTGGGTAT
GGTTTCATTGTCATCGCAATTTCATTGGCTGATAAAACGGATTCACTTGG
AGTAGGACTTGGTGTAGTTATGATTGCCATGGTGATATTATTCCTGGTAG
TTGTCGTTAAACTAGGTTTAGATGGTGCACGATTCGCTAAAGGATTGCTG
CCGATCAGTATGCCAGCAGGATCCACCAACATTGTTTTAAGCTTGGTAGG
AACAACTGCTATCGGCTTCAACCTATTCTTAGGTGGACAGATGGCAGAAG
GGAAAACGCTTCCACAAGCACAAAGAGGGATTGCATTTTCAACAGTAATG
ACTCTGATTGTGTCAGTCTTAATCATGATTGTTGGAGATGGTACAGAGTT
ACAGAAAGGGTTATTCACCATCGCCAACTTGTCTGGTACTGTAGAAAATC
TGACTGGAGGTGCTGGTCTTTGGATATTTTGTCTGGGCTTCATTGCAGCC
GCTTTAAGTTCCATGTTAGTGTGCCCGTTAGGATCAGTGATGACTTGTGA
AAGCGTTTTCAATATTTATGCGGAAAATGACGAGCAGTCGGCAATGGAGT
ATAAGAGCACTGGAGAGAAGGAACAGGATCAAGGTACAAAAGAAGGGGAG
CAAGTTATTCAAATCCAAAGTGAAGGCCAAGAAAGATTGTTTCCCAAGAA
ATATGCACGTGCTTTGATGGTCATAATGGTATCCGTAGCTGTGATTGTGA
ACGCTGCAAATGCACCACCTGTTAAAGTCATCTTGGTCGCTCAAGTGTTC
AATGGTTGTCTTCTCCCCTTCTTTTCTATCTGTCTATTGATCTGTTTGAA
CGATCCACAATTTATGGCATCTGCTCCACAAAAAGGATGGTCCAATTGCT
TCCTCACTACTGCTGTCATTATAACTTTGTTCCTGACCGCAAATTCCATG
ATTCAAAACCTCTTCGGATGGACTACAACTAATGGTCATATCTTGAAATC
CACATTTGACACCatcaaatttagtttttctggAGTGATTGCGGTGGCGA
TTAtgctttgtttgtttttgtgtacTAGTCTAGGAAAGAATGTTTGCAAA
AGTTTAAATTGCTTTAATCGTGTAGAAGACCTAAGAACATAAAAGATGAT
GATGGTGAATTTTATTAGTAACACTATAGAACCCCCTCTAATATATCTAT
ACATGACAAAAGAAATACAAATTATCCTCGACTCTGGTAGTCATTAAAAC
CTACAATGGCGCAAAGAGCGACAAATACCACGAGCGAAAAACCCACGTGT
CCGGAAAAAGTAGAACAGATTTTATTTAAAGTATAATCATCAGAACTCAT
TATTTTACTTGAATTCAGAACAATTGAACTAATGGTATGGAATTTCTTTG
TCGAATCGATAAATACTAAAagtatttttgtttacttaaatTTTGTTCCA
ATATTTCCCCTAACCCTATAGACACACAAAGATagaattttaagaaagaa
atccttaatttttaaaattgcattttcgattttcatttttaagctCAATG
GCCTATACTTTAGACGTAAACAATAAGAGTCATAGGAAAAATATCTAGCT
CATTCATAAATTCTCTagataaatacaaaaatatacaaaaaacaaatata
aacctTCCTTTTTGATGACCATCCCACCCTTTTTTCGGGAAATGTACGTA
CCCTAGTAAAACATTTTTCAGCGCTGGCATTTAGTTAAATTTTCAGTGAA
ATAAGTCTTTTGAGAGTCTTTTAATGGCCAATANcaaatttagtttttct
ggAGTGATTGCGGTGGCGATTAtgctttgtttgtttttgtgtacTAGTCT
AGGAAAGAATGTTTGCAAAAGTTTAAATTGCTTTAATCGTGTAGAAGACC
TAAGAACATAAAAGATGATGATGGTGAATTTTATTAGTAACACTATAGAA
CCCCCTTTAATGTATCTATACATGACAAAAGAAATACAAATTATCCTCGA
CTCTGGTAGTCATTAAAACCTACAATGGCGCGAAGAGCGACAAATACCAC
GAGCGAAAAACCCACGTGTCCGGAAAAAGTAGAACAGATTTTATTTAAAG
TATAATCATCAGAACTCATTATTTTACTTGAATTCAGAACAATTGAACTA
ATGGTATGGAATTTCTTTGTCGAATCGATAAATACTAAAagtatttttgt
ttacttaaatTTTGTTCCAATATTTCCCCTAACCCTATAGACACACAAAG
ATagaattttaagaaagaaatccttaatttttaaaattgcattttcgat
Run BLAST on NCBI

protein sequence of TCONS_00013098-protein

>TCONS_00013098-protein ID=TCONS_00013098-protein|Name=TCONS_00013098-protein|organism=Clytia hemisphaerica|type=polypeptide|length=534bp
MENNKNRSNPTEGQQLLQTENCNRGESHTRSKMRNSKIFKEIVSLLYWTM
LAACTVGPGTVVTCARAGAEFDLNLIWALIFASILSYTLQEGTARLTIKS
GKSLGQCLQAKYKHGRLIWGVGVICWVVAVCVFLGNTFYSCNNWAGGMSA
IYALPGAGNTVGLRVGACFGYGFIVIAISLADKTDSLGVGLGVVMIAMVI
LFLVVVVKLGLDGARFAKGLLPISMPAGSTNIVLSLVGTTAIGFNLFLGG
QMAEGKTLPQAQRGIAFSTVMTLIVSVLIMIVGDGTELQKGLFTIANLSG
TVENLTGGAGLWIFCLGFIAAALSSMLVCPLGSVMTCESVFNIYAENDEQ
SAMEYKSTGEKEQDQGTKEGEQVIQIQSEGQERLFPKKYARALMVIMVSV
AVIVNAANAPPVKVILVAQVFNGCLLPFFSICLLICLNDPQFMASAPQKG
WSNCFLTTAVIITLFLTANSMIQNLFGWTTTNGHILKSTFDTIKFSFSGV
IAVAIMLCLFLCTSLGKNVCKSLNCFNRVEDLRT
Run BLAST on NCBI

transcript from alignment at sc0000162:265687..270834+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013098 ID=TCONS_00013098|Name=TCONS_00013098|organism=Clytia hemisphaerica|type=transcript|length=5148bp|location=Sequence derived from alignment at sc0000162:265687..270834+ (Clytia hemisphaerica)
caataacaattttACCTCGAAATTGGATATATGTCCCCTAAAAATAATAC
TGCGGCGGAGAAGTACTTATGAAGTGGCGATTGAAATAtggaaaacaata
aaaatagaaGCAATCCTACAGAGGGTCAACAGCTTTTACAGACTGAAAAC
TGCAACAGAGGGGAGAGTCATACACGCAGCAAAATGAGGAATAGCAAGAT
TTTCAAAGAGATTGTGAGCCTTCTATACTGGACCATGTTGGCGGCTTGTA
CAGTGGGGCCGGGAACCGTAGTCACTTGCGCAAGGGCCGGTGCTGAATTT
GATTTGAACTTGATTTGGGCGTTGATTTTTGCTTCCATTCTCTCATATAC
TTTGCAAGAAGGTAAAGAATTTGAGCACAGACAGAAATGATGAACGTCGT
TTTACAGAAACACATTTTCTTTTCCATCGtctattctattctatttaGGG
TGGAGTTATAACCATGCCAACCCTCTTAGCTTTCATTACACTCGGAACAT
TGACAAGTTACTTGTTAACTTTGCTAACTTATCTGTACGTAATATCATTA
TCCACCATTAGGTACAGCAAGACTGACAATAAAAAGTGGTAAAAGCCTTG
GTCAATGTCTTCAAGCAAAATATAAACATGGTCGACTGATATGGGGCGTG
GGCGTTATTTGCTGGGTGGTGGCGGTCTGTGTATTTCTTGGTAAGTTGCC
TCAAAAAATGTTTAGCNCTAAAAATAATACTGCGGCGGAGAAGTACTTAT
GAAGTGGCGATTGAAATAtggaaaacaataaaaatagaaGCAATCCTACA
GAGGGTCAACAGCTTTTACAGACTGAAAACTGCAACAGAGGGGAGAGTCA
TACACGCAGCAAAATGAGGAATAGCAAGATTTTCAAAGAGATTGTGAGCC
TTCTATACTGGACCATGTTGGCGGCTTGTACAGTGGGGCCCGGAACCGTA
GTCACTTGCGCAAGGGCCGGTGCTGAATTTGATTTGAACTTGATTTGGGC
GTTGATTTTCGCTTCCATTCTCTCATATACTTTGCAGGAAGGTAAAGAAT
TTGAGCATGGACAAAAATGATAAACGTTATTTAACCTAAACACGTTTCTT
TTACATCATCTATTCTATTCAATTTAGGGTGGAGTAATAACCATGCCAAC
CTCTTAGCTTTCGTTACACTCGGAACATTGACAAGTTACTTGTTAACTTT
GCTAACTTTTATCTGTACGTAATATCATTATCCACCTTTAGGTACAGCAA
GACTGACAATAAAAAGTGGTAAAAGCCTTGGTCAATGTCTTCAAGCAAAA
TATAAACATGGTCGACTGATATGGGGCGTGGGCGTTATTTGCTGGGTGGT
GGCGGTCTGTGTATTTCTTGGTAAGTTGCCTCAAAAAATGTTTAGCCACC
TCGGTTTAAAGCtcattcgattgacaaaaagGCAAAAAGTCATTGCACTA
TTTCAATTATttatttcaattcatttttcTCCAGTTCCCGATTTGTTCTG
TTCTTGTTCAATTCCTCAGCCTGTCTAAAAGCTGCTGATTTTCTTTTCCT
TCATACTATAGGAAACACTTTTTATTCATGCAACAACTGGGCAGGTGGCA
TGTCCGCCATCTACGCACTACCCGGTGCTGGAAATACGGTCGGACTACGT
GTTGGTGCTTGTTTTGGGTATGGTTTCATTGTCATCGCAATTTCATTGGC
TGATAAAACGGATTCACTTGGAGTAGGACTTGGTGTAGTTATGATTGCCA
TGGTGATATTATTCCTGGTAGTTGTCGTTAAACTAGGTAAATTTTATTAT
CTCATGTTACAAGCCTTGAGAAGAGATTATAATTCAAAACAGCTAATTGG
AAGACACTTTTTGTCCTTTAACTATTATTCTTTGCCAAATCATGACTCAT
AGATTAATTATGTATGTGCAGTAAACAATAACCTTCTAGCAAGTTAAACC
TTGATGCTTGTTTCCCCTCCAAATCTTATTACTTGCTAACACACTTTCCG
TGGTGAAGCATAAACAATTACATTACATGAAAACATGGTTCTTAATTTTg
atgacaaaaattctttctATACCACATTATANAAGGCAAAAAGTCATTGC
ACTATTTCAATTATttatttcaattcatttttcTCCAGTTCCCGATTTGT
TCTGTTCTTGTTCAATTCCTCAGCCTGTCTAAAAGCTGCTGATTTTCTTT
TCCTTCATACTATAGGAAACACTTTTTATTCATGCAACAACTGGGCAGGT
GGCATGTCCGCCATCTACGCACTACCCGGTGCTGGAAATACGGTCGGACT
ACGTGTTGGTGCTTGTTTTGGGTATGGTTTCATTGTCATCGCAATTTCAT
TGGCTGATAAAACGGATTCACTTGGAGTAGGACTTGGTGTAGTTATGATT
GCCATGGTGATATTATTCCTGGTAGTTGTCGTTAAACTAGGTAAATTTTA
TTATCTCATGTTACAAGCCTTGAGAAGAGATTATAATTCAAAACAGCTAA
TTGGAAGACACTTTTTGTCCTTTAACTATTATTCTTTGCCAAATCATGAC
TCATAGATTAATTATGTATGTGCAGTAAACAATAACCTTCTAGCAAGTTA
AACCTTGATGCTTGTTTCCCCTCCAAATCTTATTACTTGCTAACACACTT
TCCGTGGTGAAGCATAAACAATTACATTACATGAAAACATGGTTCTTAAT
TTTgatgacaaaaattctttctATACCACATTATATCATTTCCATAGGTT
TAGATGGTGCACGATTCGCTAAAGGATTGCTGCCGATCAGTATGCCAGCA
GGATCCACCAACATTGTTTTAAGCTTGGTAGGAACAACTGCTATCGGCTT
CAACCTATTCTTAGGTGGACAGATGGCAGAAGGGAAAACGCTTCCACAAG
CACAAAGAGGGATTGCATTTTCAACAGTAATGACTCTGATTGTGTCAGTC
TTAATCATGATTGTTGGAGATGGTACAGAGTTACAGAAAGGGTTATTCAC
CATCGCCAACTTGTCTGGTACTGTAGAAAATCTGACTGGAGGTGCTGGTC
TTTGGATATTTTGTCTGGGCTTCATTGCAGCCGCTTTAAGTTCCATGTTA
GTGTGCCCGTTAGGATCAGTGATGACTTGTGAAAGCGTTTTCAATATTTA
TGCGGAAAATGACGAGCAGTCGGCAATGGAGTATAAGAGCACTGGAGAGA
AGGAACAGGATCAAGGTACAAAAGAAGGGGAGCAAGTTATTCAAATCCAA
AGTGAAGGCCAAGAAAGATTGTTTCCCAAGAAATATGCACGTGCTTTGAT
GGTCATAATGGTATCCGTAGCTGTGATTGTGAACGCTGCAAATGCACCAC
CTGTTAAAGTCATCTTGGTCGCTCAAGTAAggctttttcttatttttcta
aactAATTTTGACACAAGGCATACGTACTGATAGCTTCTAAGATCTTAAT
AAGGCCATCAGgtgttaaattttgaaaataataaaaacctACTTACTTGA
AAACGTTCTCCAACAACTGATTTGTGCGTCAACCTGAAGTAAGAAATAAG
CTGGAAAATTATCTTATCTACACTAAGCAACTGAAGTTTATATAATGTTC
ATGGATTTTTTCATTAATTGAAGTACCTTTGAATCTAATTTAGGTGTTCA
ATGGTTGTCTTCTCCCCTTCTTTTCTATCTGTCTATTGATCTGTTTGAAC
GATCCACAATTTATGGCATCTGCTCCACAAAAAGGATGGTCCAATTGCTT
CCTCACTACTGCTGTCATTATAACTTTGTTCCTGACCGCAAATTCCATGA
TTCAAAACCTCTTCGGATGGACTACAACTAATGGTCATATCTTGAAATCC
ACATTTGACACCatcaaatttagtttttctggAGTGATTGCGGTGGCGAT
TAtgctttgtttgtttttgtgtacTAGTCTAGGAAAGAATGTTTGCAAAA
GTTTAAATTGCTTTAATCGTGTAGAAGACCTAAGAACATAAAAGATGATG
ATGGTGAATTTTATTAGTAACACTATAGAACCCCCTCTAATATATCTATA
CATGACAAAAGAAATACAAATTATCCTCGACTCTGGTAGTCATTAAAACC
TACAATGGCGCAAAGAGCGACAAATACCACGAGCGAAAAACCCACGTGTC
CGGAAAAAGTAGAACAGATTTTATTTAAAGTATAATCATCAGAACTCATT
ATTTTACTTGAATTCAGAACAATTGAACTAATGGTATGGAATTTCTTTGT
CGAATCGATAAATACTAAAagtatttttgtttacttaaatTTTGTTCCAA
TATTTCCCCTAACCCTATAGACACACAAAGATagaattttaagaaagaaa
tccttaatttttaaaattgcattttcgattttcatttttaagctCAATGG
CCTATACTTTAGACGTAAACAATAAGAGTCATAGGAAAAATATCTAGCTC
ATTCATAAATTCTCTagataaatacaaaaatatacaaaaaacaaatataa
acctTCCTTTTTGATGACCATCCCACCCTTTTTTCGGGAAATGTACGTAC
CCTAGTAAAACATTTTTCAGCGCTGGCATTTAGTTAAATTTTCAGTGAAA
TAAGTCTTTTGAGAGTCTTTTAATGGCCAATANcaaatttagtttttctg
gAGTGATTGCGGTGGCGATTAtgctttgtttgtttttgtgtacTAGTCTA
GGAAAGAATGTTTGCAAAAGTTTAAATTGCTTTAATCGTGTAGAAGACCT
AAGAACATAAAAGATGATGATGGTGAATTTTATTAGTAACACTATAGAAC
CCCCTTTAATGTATCTATACATGACAAAAGAAATACAAATTATCCTCGAC
TCTGGTAGTCATTAAAACCTACAATGGCGCGAAGAGCGACAAATACCACG
AGCGAAAAACCCACGTGTCCGGAAAAAGTAGAACAGATTTTATTTAAAGT
ATAATCATCAGAACTCATTATTTTACTTGAATTCAGAACAATTGAACTAA
TGGTATGGAATTTCTTTGTCGAATCGATAAATACTAAAagtatttttgtt
tacttaaatTTTGTTCCAATATTTCCCCTAACCCTATAGACACACAAAGA
Tagaattttaagaaagaaatccttaatttttaaaattgcattttcgat

Coding sequence (CDS) from alignment at sc0000162:265687..270834+

>TCONS_00013098 ID=TCONS_00013098|Name=TCONS_00013098|organism=Clytia hemisphaerica|type=CDS|length=9630bp|location=Sequence derived from alignment at sc0000162:265687..270834+ (Clytia hemisphaerica)
AtggaaaacaataaaaatagaaGCAATCCTACAGAGGGTCAACAGCTTTT
ACAGACTGAAAACTGCAACAGAGGGGAGAGTCATACACGCAGCAAAATGA
GGAATAGCAAGATTTTCAAAGAGATTGTGAGCCTTCTATACTGGACCATG
TTGGCGGCTTGTACAGTGGGGCCGGGAACCGTAGTCACTTGCGCAAGGGC
CGGTGCTGAATTTGATTTGAACTTGATTTGGGCGTTGATTTTTGCTTCCA
TTCTCTCATATACTTTGCAAGAAGGTACAGCAAGACTGACAATAAAAAGT
GGTAAAAGCCTTGGTCAATGTCTTCAAGCAAAATATAAACATGGTCGACT
GATATGGGGCGTGGGCGTTATTTGCTGGGTGGTGGCGGTCTGTGTATTTC
TTGGAAACACTTTTTATTCATGCAACAACTGGGCAGGTGGCATGTCCGCC
ATCTACGCACTACCCGGTGCTGGAAATACGGTCGGACTACGTGTTGGTGC
TTGTTTTGGGTATGGTTTCATTGTCATCGCAATTTCATTGGCTGATAAAA
CGGATTCACTTGGAGTAGGACTTGGTGTAGTTATGATTGCCATGGTGATA
TTATTCCTGGTAGTTGTCGTTAAACTAGGTTTAGATGGTGCACGATTCGC
TAAAGGATTGCTGCCGATCAGTATGCCAGCAGGATCCACCAACATTGTTT
TAAGCTTGGTAGGAACAACTGCTATCGGCTTCAACCTATTCTTAGGTGGA
CAGATGGCAGAAGGGAAAACGCTTCCACAAGCACAAAGAGGGATTGCATT
TTCAACAGTAATGACTCTGATTGTGTCAGTCTTAATCATGATTGTTGGAG
ATGGTACAGAGTTACAGAAAGGGTTATTCACCATCGCCAACTTGTCTGGT
ACTGTAGAAAATCTGACTGGAGGTGCTGGTCTTTGGATATTTTGTCTGGG
CTTCATTGCAGCCGCTTTAAGTTCCATGTTAGTGTGCCCGTTAGGATCAG
TGATGACTTGTGAAAGCGTTTTCAATATTTATGCGGAAAATGACGAGCAG
TCGGCAATGGAGTATAAGAGCACTGGAGAGAAGGAACAGGATCAAGGTAC
AAAAGAAGGGGAGCAAGTTATTCAAATCCAAAGTGAAGGCCAAGAAAGAT
TGTTTCCCAAGAAATATGCACGTGCTTTGATGGTCATAATGGTATCCGTA
GCTGTGATTGTGAACGCTGCAAATGCACCACCTGTTAAAGTCATCTTGGT
CGCTCAAGTGTTCAATGGTTGTCTTCTCCCCTTCTTTTCTATCTGTCTAT
TGATCTGTTTGAACGATCCACAATTTATGGCATCTGCTCCACAAAAAGGA
TGGTCCAATTGCTTCCTCACTACTGCTGTCATTATAACTTTGTTCCTGAC
CGCAAATTCCATGATTCAAAACCTCTTCGGATGGACTACAACTAATGGTC
ATATCTTGAAATCCACATTTGACACCatcaaatttagtttttctggAGTG
ATTGCGGTGGCGATTAtgctttgtttgtttttgtgtacTAGTCTAGGAAA
GAATGTTTGCAAAAGTTTAAATTGCTTTAATCGTGTAGAAGACCTAAGAA
CATAAAtggaaaacaataaaaatagaaGCAATCCTACAGAGGGTCAACAG
CTTTTACAGACTGAAAACTGCAACAGAGGGGAGAGTCATACACGCAGCAA
AATGAGGAATAGCAAGATTTTCAAAGAGATTGTGAGCCTTCTATACTGGA
CCATGTTGGCGGCTTGTACAGTGGGGCCGGGAACCGTAGTCACTTGCGCA
AGGGCCGGTGCTGAATTTGATTTGAACTTGATTTGGGCGTTGATTTTTGC
TTCCATTCTCTCATATACTTTGCAAGAAGGTACAGCAAGACTGACAATAA
AAAGTGGTAAAAGCCTTGGTCAATGTCTTCAAGCAAAATATAAACATGGT
CGACTGATATGGGGCGTGGGCGTTATTTGCTGGGTGGTGGCGGTCTGTGT
ATTTCTTGGAAACACTTTTTATTCATGCAACAACTGGGCAGGTGGCATGT
CCGCCATCTACGCACTACCCGGTGCTGGAAATACGGTCGGACTACGTGTT
GGTGCTTGTTTTGGGTATGGTTTCATTGTCATCGCAATTTCATTGGCTGA
TAAAACGGATTCACTTGGAGTAGGACTTGGTGTAGTTATGATTGCCATGG
TGATATTATTCCTGGTAGTTGTCGTTAAACTAGGTTTAGATGGTGCACGA
TTCGCTAAAGGATTGCTGCCGATCAGTATGCCAGCAGGATCCACCAACAT
TGTTTTAAGCTTGGTAGGAACAACTGCTATCGGCTTCAACCTATTCTTAG
GTGGACAGATGGCAGAAGGGAAAACGCTTCCACAAGCACAAAGAGGGATT
GCATTTTCAACAGTAATGACTCTGATTGTGTCAGTCTTAATCATGATTGT
TGGAGATGGTACAGAGTTACAGAAAGGGTTATTCACCATCGCCAACTTGT
CTGGTACTGTAGAAAATCTGACTGGAGGTGCTGGTCTTTGGATATTTTGT
CTGGGCTTCATTGCAGCCGCTTTAAGTTCCATGTTAGTGTGCCCGTTAGG
ATCAGTGATGACTTGTGAAAGCGTTTTCAATATTTATGCGGAAAATGACG
AGCAGTCGGCAATGGAGTATAAGAGCACTGGAGAGAAGGAACAGGATCAA
GGTACAAAAGAAGGGGAGCAAGTTATTCAAATCCAAAGTGAAGGCCAAGA
AAGATTGTTTCCCAAGAAATATGCACGTGCTTTGATGGTCATAATGGTAT
CCGTAGCTGTGATTGTGAACGCTGCAAATGCACCACCTGTTAAAGTCATC
TTGGTCGCTCAAGTGTTCAATGGTTGTCTTCTCCCCTTCTTTTCTATCTG
TCTATTGATCTGTTTGAACGATCCACAATTTATGGCATCTGCTCCACAAA
AAGGATGGTCCAATTGCTTCCTCACTACTGCTGTCATTATAACTTTGTTC
CTGACCGCAAATTCCATGATTCAAAACCTCTTCGGATGGACTACAACTAA
TGGTCATATCTTGAAATCCACATTTGACACCatcaaatttagtttttctg
gAGTGATTGCGGTGGCGATTAtgctttgtttgtttttgtgtacTAGTCTA
GGAAAGAATGTTTGCAAAAGTTTAAATTGCTTTAATCGTGTAGAAGACCT
AAGAACATAAAtggaaaacaataaaaatagaaGCAATCCTACAGAGGGTC
AACAGCTTTTACAGACTGAAAACTGCAACAGAGGGGAGAGTCATACACGC
AGCAAAATGAGGAATAGCAAGATTTTCAAAGAGATTGTGAGCCTTCTATA
CTGGACCATGTTGGCGGCTTGTACAGTGGGGCCGGGAACCGTAGTCACTT
GCGCAAGGGCCGGTGCTGAATTTGATTTGAACTTGATTTGGGCGTTGATT
TTTGCTTCCATTCTCTCATATACTTTGCAAGAAGGTACAGCAAGACTGAC
AATAAAAAGTGGTAAAAGCCTTGGTCAATGTCTTCAAGCAAAATATAAAC
ATGGTCGACTGATATGGGGCGTGGGCGTTATTTGCTGGGTGGTGGCGGTC
TGTGTATTTCTTGGAAACACTTTTTATTCATGCAACAACTGGGCAGGTGG
CATGTCCGCCATCTACGCACTACCCGGTGCTGGAAATACGGTCGGACTAC
GTGTTGGTGCTTGTTTTGGGTATGGTTTCATTGTCATCGCAATTTCATTG
GCTGATAAAACGGATTCACTTGGAGTAGGACTTGGTGTAGTTATGATTGC
CATGGTGATATTATTCCTGGTAGTTGTCGTTAAACTAGGTTTAGATGGTG
CACGATTCGCTAAAGGATTGCTGCCGATCAGTATGCCAGCAGGATCCACC
AACATTGTTTTAAGCTTGGTAGGAACAACTGCTATCGGCTTCAACCTATT
CTTAGGTGGACAGATGGCAGAAGGGAAAACGCTTCCACAAGCACAAAGAG
GGATTGCATTTTCAACAGTAATGACTCTGATTGTGTCAGTCTTAATCATG
ATTGTTGGAGATGGTACAGAGTTACAGAAAGGGTTATTCACCATCGCCAA
CTTGTCTGGTACTGTAGAAAATCTGACTGGAGGTGCTGGTCTTTGGATAT
TTTGTCTGGGCTTCATTGCAGCCGCTTTAAGTTCCATGTTAGTGTGCCCG
TTAGGATCAGTGATGACTTGTGAAAGCGTTTTCAATATTTATGCGGAAAA
TGACGAGCAGTCGGCAATGGAGTATAAGAGCACTGGAGAGAAGGAACAGG
ATCAAGGTACAAAAGAAGGGGAGCAAGTTATTCAAATCCAAAGTGAAGGC
CAAGAAAGATTGTTTCCCAAGAAATATGCACGTGCTTTGATGGTCATAAT
GGTATCCGTAGCTGTGATTGTGAACGCTGCAAATGCACCACCTGTTAAAG
TCATCTTGGTCGCTCAAGTGTTCAATGGTTGTCTTCTCCCCTTCTTTTCT
ATCTGTCTATTGATCTGTTTGAACGATCCACAATTTATGGCATCTGCTCC
ACAAAAAGGATGGTCCAATTGCTTCCTCACTACTGCTGTCATTATAACTT
TGTTCCTGACCGCAAATTCCATGATTCAAAACCTCTTCGGATGGACTACA
ACTAATGGTCATATCTTGAAATCCACATTTGACACCatcaaatttagttt
ttctggAGTGATTGCGGTGGCGATTAtgctttgtttgtttttgtgtacTA
GTCTAGGAAAGAATGTTTGCAAAAGTTTAAATTGCTTTAATCGTGTAGAA
GACCTAAGAACATAAAtggaaaacaataaaaatagaaGCAATCCTACAGA
GGGTCAACAGCTTTTACAGACTGAAAACTGCAACAGAGGGGAGAGTCATA
CACGCAGCAAAATGAGGAATAGCAAGATTTTCAAAGAGATTGTGAGCCTT
CTATACTGGACCATGTTGGCGGCTTGTACAGTGGGGCCGGGAACCGTAGT
CACTTGCGCAAGGGCCGGTGCTGAATTTGATTTGAACTTGATTTGGGCGT
TGATTTTTGCTTCCATTCTCTCATATACTTTGCAAGAAGGTACAGCAAGA
CTGACAATAAAAAGTGGTAAAAGCCTTGGTCAATGTCTTCAAGCAAAATA
TAAACATGGTCGACTGATATGGGGCGTGGGCGTTATTTGCTGGGTGGTGG
CGGTCTGTGTATTTCTTGGAAACACTTTTTATTCATGCAACAACTGGGCA
GGTGGCATGTCCGCCATCTACGCACTACCCGGTGCTGGAAATACGGTCGG
ACTACGTGTTGGTGCTTGTTTTGGGTATGGTTTCATTGTCATCGCAATTT
CATTGGCTGATAAAACGGATTCACTTGGAGTAGGACTTGGTGTAGTTATG
ATTGCCATGGTGATATTATTCCTGGTAGTTGTCGTTAAACTAGGTTTAGA
TGGTGCACGATTCGCTAAAGGATTGCTGCCGATCAGTATGCCAGCAGGAT
CCACCAACATTGTTTTAAGCTTGGTAGGAACAACTGCTATCGGCTTCAAC
CTATTCTTAGGTGGACAGATGGCAGAAGGGAAAACGCTTCCACAAGCACA
AAGAGGGATTGCATTTTCAACAGTAATGACTCTGATTGTGTCAGTCTTAA
TCATGATTGTTGGAGATGGTACAGAGTTACAGAAAGGGTTATTCACCATC
GCCAACTTGTCTGGTACTGTAGAAAATCTGACTGGAGGTGCTGGTCTTTG
GATATTTTGTCTGGGCTTCATTGCAGCCGCTTTAAGTTCCATGTTAGTGT
GCCCGTTAGGATCAGTGATGACTTGTGAAAGCGTTTTCAATATTTATGCG
GAAAATGACGAGCAGTCGGCAATGGAGTATAAGAGCACTGGAGAGAAGGA
ACAGGATCAAGGTACAAAAGAAGGGGAGCAAGTTATTCAAATCCAAAGTG
AAGGCCAAGAAAGATTGTTTCCCAAGAAATATGCACGTGCTTTGATGGTC
ATAATGGTATCCGTAGCTGTGATTGTGAACGCTGCAAATGCACCACCTGT
TAAAGTCATCTTGGTCGCTCAAGTGTTCAATGGTTGTCTTCTCCCCTTCT
TTTCTATCTGTCTATTGATCTGTTTGAACGATCCACAATTTATGGCATCT
GCTCCACAAAAAGGATGGTCCAATTGCTTCCTCACTACTGCTGTCATTAT
AACTTTGTTCCTGACCGCAAATTCCATGATTCAAAACCTCTTCGGATGGA
CTACAACTAATGGTCATATCTTGAAATCCACATTTGACACCatcaaattt
agtttttctggAGTGATTGCGGTGGCGATTAtgctttgtttgtttttgtg
tacTAGTCTAGGAAAGAATGTTTGCAAAAGTTTAAATTGCTTTAATCGTG
TAGAAGACCTAAGAACATAAAtggaaaacaataaaaatagaaGCAATCCT
ACAGAGGGTCAACAGCTTTTACAGACTGAAAACTGCAACAGAGGGGAGAG
TCATACACGCAGCAAAATGAGGAATAGCAAGATTTTCAAAGAGATTGTGA
GCCTTCTATACTGGACCATGTTGGCGGCTTGTACAGTGGGGCCGGGAACC
GTAGTCACTTGCGCAAGGGCCGGTGCTGAATTTGATTTGAACTTGATTTG
GGCGTTGATTTTTGCTTCCATTCTCTCATATACTTTGCAAGAAGGTACAG
CAAGACTGACAATAAAAAGTGGTAAAAGCCTTGGTCAATGTCTTCAAGCA
AAATATAAACATGGTCGACTGATATGGGGCGTGGGCGTTATTTGCTGGGT
GGTGGCGGTCTGTGTATTTCTTGGAAACACTTTTTATTCATGCAACAACT
GGGCAGGTGGCATGTCCGCCATCTACGCACTACCCGGTGCTGGAAATACG
GTCGGACTACGTGTTGGTGCTTGTTTTGGGTATGGTTTCATTGTCATCGC
AATTTCATTGGCTGATAAAACGGATTCACTTGGAGTAGGACTTGGTGTAG
TTATGATTGCCATGGTGATATTATTCCTGGTAGTTGTCGTTAAACTAGGT
TTAGATGGTGCACGATTCGCTAAAGGATTGCTGCCGATCAGTATGCCAGC
AGGATCCACCAACATTGTTTTAAGCTTGGTAGGAACAACTGCTATCGGCT
TCAACCTATTCTTAGGTGGACAGATGGCAGAAGGGAAAACGCTTCCACAA
GCACAAAGAGGGATTGCATTTTCAACAGTAATGACTCTGATTGTGTCAGT
CTTAATCATGATTGTTGGAGATGGTACAGAGTTACAGAAAGGGTTATTCA
CCATCGCCAACTTGTCTGGTACTGTAGAAAATCTGACTGGAGGTGCTGGT
CTTTGGATATTTTGTCTGGGCTTCATTGCAGCCGCTTTAAGTTCCATGTT
AGTGTGCCCGTTAGGATCAGTGATGACTTGTGAAAGCGTTTTCAATATTT
ATGCGGAAAATGACGAGCAGTCGGCAATGGAGTATAAGAGCACTGGAGAG
AAGGAACAGGATCAAGGTACAAAAGAAGGGGAGCAAGTTATTCAAATCCA
AAGTGAAGGCCAAGAAAGATTGTTTCCCAAGAAATATGCACGTGCTTTGA
TGGTCATAATGGTATCCGTAGCTGTGATTGTGAACGCTGCAAATGCACCA
CCTGTTAAAGTCATCTTGGTCGCTCAAGTGTTCAATGGTTGTCTTCTCCC
CTTCTTTTCTATCTGTCTATTGATCTGTTTGAACGATCCACAATTTATGG
CATCTGCTCCACAAAAAGGATGGTCCAATTGCTTCCTCACTACTGCTGTC
ATTATAACTTTGTTCCTGACCGCAAATTCCATGATTCAAAACCTCTTCGG
ATGGACTACAACTAATGGTCATATCTTGAAATCCACATTTGACACCatca
aatttagtttttctggAGTGATTGCGGTGGCGATTAtgctttgtttgttt
ttgtgtacTAGTCTAGGAAAGAATGTTTGCAAAAGTTTAAATTGCTTTAA
TCGTGTAGAAGACCTAAGAACATAAAtggaaaacaataaaaatagaaGCA
ATCCTACAGAGGGTCAACAGCTTTTACAGACTGAAAACTGCAACAGAGGG
GAGAGTCATACACGCAGCAAAATGAGGAATAGCAAGATTTTCAAAGAGAT
TGTGAGCCTTCTATACTGGACCATGTTGGCGGCTTGTACAGTGGGGCCGG
GAACCGTAGTCACTTGCGCAAGGGCCGGTGCTGAATTTGATTTGAACTTG
ATTTGGGCGTTGATTTTTGCTTCCATTCTCTCATATACTTTGCAAGAAGG
TACAGCAAGACTGACAATAAAAAGTGGTAAAAGCCTTGGTCAATGTCTTC
AAGCAAAATATAAACATGGTCGACTGATATGGGGCGTGGGCGTTATTTGC
TGGGTGGTGGCGGTCTGTGTATTTCTTGGAAACACTTTTTATTCATGCAA
CAACTGGGCAGGTGGCATGTCCGCCATCTACGCACTACCCGGTGCTGGAA
ATACGGTCGGACTACGTGTTGGTGCTTGTTTTGGGTATGGTTTCATTGTC
ATCGCAATTTCATTGGCTGATAAAACGGATTCACTTGGAGTAGGACTTGG
TGTAGTTATGATTGCCATGGTGATATTATTCCTGGTAGTTGTCGTTAAAC
TAGGTTTAGATGGTGCACGATTCGCTAAAGGATTGCTGCCGATCAGTATG
CCAGCAGGATCCACCAACATTGTTTTAAGCTTGGTAGGAACAACTGCTAT
CGGCTTCAACCTATTCTTAGGTGGACAGATGGCAGAAGGGAAAACGCTTC
CACAAGCACAAAGAGGGATTGCATTTTCAACAGTAATGACTCTGATTGTG
TCAGTCTTAATCATGATTGTTGGAGATGGTACAGAGTTACAGAAAGGGTT
ATTCACCATCGCCAACTTGTCTGGTACTGTAGAAAATCTGACTGGAGGTG
CTGGTCTTTGGATATTTTGTCTGGGCTTCATTGCAGCCGCTTTAAGTTCC
ATGTTAGTGTGCCCGTTAGGATCAGTGATGACTTGTGAAAGCGTTTTCAA
TATTTATGCGGAAAATGACGAGCAGTCGGCAATGGAGTATAAGAGCACTG
GAGAGAAGGAACAGGATCAAGGTACAAAAGAAGGGGAGCAAGTTATTCAA
ATCCAAAGTGAAGGCCAAGAAAGATTGTTTCCCAAGAAATATGCACGTGC
TTTGATGGTCATAATGGTATCCGTAGCTGTGATTGTGAACGCTGCAAATG
CACCACCTGTTAAAGTCATCTTGGTCGCTCAAGTGTTCAATGGTTGTCTT
CTCCCCTTCTTTTCTATCTGTCTATTGATCTGTTTGAACGATCCACAATT
TATGGCATCTGCTCCACAAAAAGGATGGTCCAATTGCTTCCTCACTACTG
CTGTCATTATAACTTTGTTCCTGACCGCAAATTCCATGATTCAAAACCTC
TTCGGATGGACTACAACTAATGGTCATATCTTGAAATCCACATTTGACAC
CatcaaatttagtttttctggAGTGATTGCGGTGGCGATTAtgctttgtt
tgtttttgtgtacTAGTCTAGGAAAGAATGTTTGCAAAAGTTTAAATTGC
TTTAATCGTGTAGAAGACCTAAGAACATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007328XLOC_007328Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013098-proteinTCONS_00013098-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013098-exon-sc0000162-1491911889:265687..266047TCONS_00013098-exon-sc0000162-1491911889:265687..266047Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1510915933:265687..266047TCONS_00013098-exon-sc0000162-1510915933:265687..266047Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1575043694:265687..266047TCONS_00013098-exon-sc0000162-1575043694:265687..266047Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1491911889:266928..267056TCONS_00013098-exon-sc0000162-1491911889:266928..267056Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1510915933:266928..267056TCONS_00013098-exon-sc0000162-1510915933:266928..267056Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1575043694:266928..267056TCONS_00013098-exon-sc0000162-1575043694:266928..267056Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1491911889:267248..267280TCONS_00013098-exon-sc0000162-1491911889:267248..267280Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1510915933:267248..267280TCONS_00013098-exon-sc0000162-1510915933:267248..267280Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1575043694:267248..267280TCONS_00013098-exon-sc0000162-1575043694:267248..267280Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1491911889:267935..268126TCONS_00013098-exon-sc0000162-1491911889:267935..268126Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1510915933:267935..268126TCONS_00013098-exon-sc0000162-1510915933:267935..268126Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1575043694:267935..268126TCONS_00013098-exon-sc0000162-1575043694:267935..268126Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1491911889:268434..269062TCONS_00013098-exon-sc0000162-1491911889:268434..269062Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1510915933:268434..269062TCONS_00013098-exon-sc0000162-1510915933:268434..269062Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1575043694:268434..269062TCONS_00013098-exon-sc0000162-1575043694:268434..269062Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1491911889:269330..270834TCONS_00013098-exon-sc0000162-1491911889:269330..270834Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1510915933:269330..270834TCONS_00013098-exon-sc0000162-1510915933:269330..270834Clytia hemisphaericaexon
TCONS_00013098-exon-sc0000162-1575043694:269330..270834TCONS_00013098-exon-sc0000162-1575043694:269330..270834Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000162supercontigsc0000162:265687..270834 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.139793	0.0734728	0.0186606	0	0	0.0524427	0	0.0297277	0	0.18143	8.20641	8.91192	7.04503	6.86212	0.755877	0.69795	2.62138	2.02412	0.64129	0.573465	0.261949	0.199738	0.267022	0	0.0707373	0.132057	0	0.166022
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001046NRAMP_fam
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013098 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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