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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013057 ID=TCONS_00013057|Name=TCONS_00013057|organism=Clytia hemisphaerica|type=transcript|length=919bp
caACAGAGACTTTCAATGATTGATCATGATAGACTGTCTTTCCTTGGGCC
GAAGTCTTCTGACGGGAATCTCTTTTTTGCAACAGTTTTCCCGGAGATGA
GGAAGTCAGCCTTTCTCTATTACGGCAAAATACCATCAATTCTTTCAAAC
TTTCTCNCTGTACCGCAAAGGAGATTTTTCGATTATAAGAAACTACGGAA
CATCGAATATGATCGTTTGAAACAAGAAAACGGCATCAAGCGAGTTTTCT
ATGTAcatcatttccaaaacatcacTCGCTTATTTCTTGGTTTCACTAAA
AAAGTTTACGTTTTCAACCCGTTTTCTTGTCAATTGTTATACAAGCTAGA
CTTGTCTTGCAGCCTGGAGACGCCATATTGTTACACACTTGATGCCAATT
GGTCAGGCAAAGAAGTATCATTATTCTGTTGggataatttcaattttgtt
tctCTTAAGATTTATCATCTTGAGGAGGAGTTTGATATGTCGTTAAAACA
ACAAGCCTTGTTGGCTGTTCAAGCAAATTATTCACTGGAGACTTTGAAAA
AGATGAGAGTACCGAAATTTATTTTAGCATCACTGGGTGATACGTCAGTT
TGATTGTTTAACTGCTGTTCGTATTTTTAAGGGTTCGGCCTATTTGCCAC
GGAAAAAAATGAAGGTTCGACCTTTCAAATTTGTACTGGGaatgtgtcaa
tttttatgacaccttactgtcagaattgtcatcatgctcaagaaAATTAT
TAGGTGTCAAAAAAAAGTTatataaaaattatgaatttttacaCTGAACA
TATGTTTGACCAACGAACACAAAAAAGCCCCATCCCCCTAAttacgaata
gggttaatgaTTCTCTCTGCAGATAGGGTAGTGTTTTAATAACTCGAGCC
TAAAAAAGCTTGAGATTTC Run BLAST on NCBI protein sequence of TCONS_00013057-protein >TCONS_00013057-protein ID=TCONS_00013057-protein|Name=TCONS_00013057-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
QQRLSMIDHDRLSFLGPKSSDGNLFFATVFPEMRKSAFLYYGKIPSILSN
FLXVPQRRFFDYKKLRNIEYDRLKQENGIKRVFYVHHFQNITRLFLGFTK
KVYVFNPFSCQLLYKLDLSCSLETPYCYTLDANWSGKEVSLFCWDNFNFV
SLKIYHLEEEFDMSLKQQALLAVQANYSLETLKKMRVPKFILASLGDTSV Run BLAST on NCBI transcript from alignment at sc0000161:474876..475794 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013057 ID=TCONS_00013057|Name=TCONS_00013057|organism=Clytia hemisphaerica|type=transcript|length=919bp|location=Sequence derived from alignment at sc0000161:474876..475794 (Clytia hemisphaerica)
GAAATCTCAAGCTTTTTTAGGCTCGAGTTATTAAAACACTACCCTATCTG
CAGAGAGAAtcattaaccctattcgtaaTTAGGGGGATGGGGCTTTTTTG
TGTTCGTTGGTCAAACATATGTTCAGtgtaaaaattcataatttttatat
AACTTTTTTTTGACACCTAATAATTttcttgagcatgatgacaattctga
cagtaaggtgtcataaaaattgacacattCCCAGTACAAATTTGAAAGGT
CGAACCTTCATTTTTTTCCGTGGCAAATAGGCCGAACCCTTAAAAATACG
AACAGCAGTTAAACAATCAAACTGACGTATCACCCAGTGATGCTAAAATA
AATTTCGGTACTCTCATCTTTTTCAAAGTCTCCAGTGAATAATTTGCTTG
AACAGCCAACAAGGCTTGTTGTTTTAACGACATATCAAACTCCTCCTCAA
GATGATAAATCTTAAGagaaacaaaattgaaattatccCAACAGAATAAT
GATACTTCTTTGCCTGACCAATTGGCATCAAGTGTGTAACAATATGGCGT
CTCCAGGCTGCAAGACAAGTCTAGCTTGTATAACAATTGACAAGAAAACG
GGTTGAAAACGTAAACTTTTTTAGTGAAACCAAGAAATAAGCGAgtgatg
ttttggaaatgatgTACATAGAAAACTCGCTTGATGCCGTTTTCTTGTTT
CAAACGATCATATTCGATGTTCCGTAGTTTCTTATAATCGAAAAATCTCC
TTTGCGGTACAGNGAGAAAGTTTGAAAGAATTGATGGTATTTTGCCGTAA
TAGAGAAAGGCTGACTTCCTCATCTCCGGGAAAACTGTTGCAAAAAAGAG
ATTCCCGTCAGAAGACTTCGGCCCAAGGAAAGACAGTCTATCATGATCAA
TCATTGAAAGTCTCTGTtg Coding sequence (CDS) from alignment at sc0000161:474876..475794 >TCONS_00013057 ID=TCONS_00013057|Name=TCONS_00013057|organism=Clytia hemisphaerica|type=CDS|length=603bp|location=Sequence derived from alignment at sc0000161:474876..475794 (Clytia hemisphaerica)
TCAAACTGACGTATCACCCAGTGATGCTAAAATAAATTTCGGTACTCTCA
TCTTTTTCAAAGTCTCCAGTGAATAATTTGCTTGAACAGCCAACAAGGCT
TGTTGTTTTAACGACATATCAAACTCCTCCTCAAGATGATAAATCTTAAG
agaaacaaaattgaaattatccCAACAGAATAATGATACTTCTTTGCCTG
ACCAATTGGCATCAAGTGTGTAACAATATGGCGTCTCCAGGCTGCAAGAC
AAGTCTAGCTTGTATAACAATTGACAAGAAAACGGGTTGAAAACGTAAAC
TTTTTTAGTGAAACCAAGAAATAAGCGAgtgatgttttggaaatgatgTA
CATAGAAAACTCGCTTGATGCCGTTTTCTTGTTTCAAACGATCATATTCG
ATGTTCCGTAGTTTCTTATAATCGAAAAATCTCCTTTGCGGTACAGNGAG
AAAGTTTGAAAGAATTGATGGTATTTTGCCGTAATAGAGAAAGGCTGACT
TCCTCATCTCCGGGAAAACTGTTGCAAAAAAGAGATTCCCGTCAGAAGAC
TTCGGCCCAAGGAAAGACAGTCTATCATGATCAATCATTGAAAGTCTCTG
Ttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013057-exon-sc0000161-1491911889:474876..475794 | TCONS_00013057-exon-sc0000161-1491911889:474876..475794 | Clytia hemisphaerica | exon |
| TCONS_00013057-exon-sc0000161-1510915933:474876..475794 | TCONS_00013057-exon-sc0000161-1510915933:474876..475794 | Clytia hemisphaerica | exon |
| TCONS_00013057-exon-sc0000161-1575043694:474876..475794 | TCONS_00013057-exon-sc0000161-1575043694:474876..475794 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000161 | supercontig | sc0000161:474876..475794 . |
Blast
The following BLAST results are available for this feature:
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