TCONS_00012946 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012946
Unique NameTCONS_00012946
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3343

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012946 ID=TCONS_00012946|Name=TCONS_00012946|organism=Clytia hemisphaerica|type=transcript|length=3343bp
NAGAAAGAGAAGAATCTTCAACCAACACTCTCCACCATAATGGAGTTCAC
GATGAAGagcTGGAACAGAAGTTTGAATCTGAAAGACTATCATACCAAGA
AAAGATCGAAAATCTCGAAAACGAAATAGCAGAACTACGGAGCAATCAAG
AAACTAATGGCTCTCGTAAACAAGCTGAAAGCACAAGAAGAGATTTACAA
AAACAAGTGCAAGAGTTGAAGTCACAAGTTACACGACTTGAACAAGATAA
CGCTAGACAAGAAGGACAGGTGGTGCGCTTGGAAACTCAAGTCAAGAGAT
ACAAGAGTCAAGCCGACCAAGCAGTAGCAACTGAAGATGGCCTACTTGCT
GAGAAAAGAAAGATTGGGCGTGAGTTGAGACAATGTCAAGAACAAATCAA
AGAAATGGAAACGGAGAAAGAACAATTACAGAAAAGGTTGGACAAGTTAA
AAATTCGTAGAGGTATTGATACGTTATAGTTATTACCTAGCACTAGAGCG
CACTTCTCCGTCCCATTAACATGCTTCTACACGGCTCCGCTTGCCCGTTA
GCTTTGCGCAATTATGTTTAATAAGAGAAATACTTATTTTTAGGTATAGT
AATAAAAAATTCTAAGATACATTTTCATAataatattattatatattttt
ttctttttcaaatattttttcttatgtttttggcattctttttttttttg
ctgacgaCAACAAAAAATAGATAATTTATCACAAAATACTTCCTACGTAA
ctttgttttatgaaaataatttttttgtaaaatatcatACATTAATGCAG
TAATTTTTTGACGCATCAATATAAGAAGTAAATTTCAAGGATTTCCAGAC
CCTCATATTCCAAGATTTGCCTTGCATCGCGTAGAATTGAACAGTCTGTT
GCGTTATGTATTAGCGTTATAGATATATACCTTTTTCAACCAAATCTCAG
TTTGATTAATATCATAACTTTcataattttgaagatttttgcgtctagct
aACTGATGTCGTTACTTGAGCGCAACCAGTCCTGGTTACCCATGaatcat
ttcgactgtgaaattGCCTGTGTGTGACGCAATTCGATTGGCACAAAATA
GAACGCGCGCGAAAAGCAATGCAAAAACTTGTTTCTTGAGATGAAAAAAA
GCGCGACATTCATTCTGCGCGATGGGTACCTTGATATCTTGAAACAaagc
taaaaaagggtttttgacTTTTGATGGTTTTATACACccaaatttgtcaa
aatatatCTTAATTACACTAGAATCTTTCAATTCAAGTATTCCTCTGAAA
TAATGCTATAATAGTAAAAGGCTCCTTCCATTTAGACTTATtagtatgat
tttttttaaatgaatgattgaaaattgaaaattaataggaaatttttttt
taagatataaaatatttttgccattaGTGAATTATTTTGTTGGTAAGCAG
TTATGTTTTGGTTTGATTGGAATAATTTaagattatatattttttgttgt
ttttttcggtTGTTTAGATTTGGGAAGGTTAAATTTAGAGATAATTGTCA
AGATAATTAACTTTTCTTCTGAAAGGGACATTTGACAGTTGAAAACAAGC
TGTATGCAGGCTATGCAGCgtgatacaaaatcaaaacaaattttacaaaa
taaaaattcagaatattccgtttttattgttttaaaaagtttcGGTTGTG
ACTTTTATTGTTCTACTCTATGTATGACACGTTGTTCAAGAAGTGTTTAC
ATTTTTCACTTCCCGCGCTAAGACTCCATTGACTCTTCCGGAATTTTGTG
TTTACTTACGAAACTGAAATATCTCCGAAactcatttttcaactacccgg
agccttggtctttttccgctagaaaagttGCATTGCAGTGAAATCTTAGT
GCGGGACTGGAATCTTATGGAAAACGACGGTACTACTGTTATCCCTGTTA
TTTAATCCTACCGTCTAATCAATAAAATATAACCTCTTCTAAACTTACCC
ACAAAAACAACAATAGATTTGTGATATAATTTATGCAGTAGTTTATATTT
TACTACATTGTTTTAggtattttttgtcattttctcaGTTTGTCACGTGA
TGAAAATCGTTACATGTGAATCTAGGTCCCAGGctctttctttaaaattt
gtaaacaaaagaaaagaccACTCCCTAACCCCCCAGGGCACAATTTGAGA
AATCCTTTtgttaatacaccttttcgaccgtattCACGCGGTCGGGCGTG
TGCCACTTCATTaattaattatccccctaaactcgatccaatcctttttt
tacaactttttctaTTGCAAAAAAACTGGAACGGTTTTAAGGGGGTAaat
tggacaaaaaaatgcccgtgcggcaattggtggctacagTCGAAACGGTg
tattctgctttgtcagcaaaaaagaaatattgatAGAAAAGGTGAAAGGA
ACTGAAAGTATACATACATACAGTATTAcggtaaaattgtttcatatctt
tgttgaaaaattcacATACGCGATGCCTATCCAAATTAAATTAGATTTTA
TTGCTCGTTTGTGGTATTTAAAGATTGATTAATTACTCCGACGTCAAGCA
ATGATGAGTTTGCTTAATATCACTCGTCAAAACCTAATTAACTGGCATTG
GCTAACACAAACTGCTGGGATATCGTAGTTTCTTTATTGAATTTCTCTAT
AATTCTTGATCGAAAGGTTTTCTTATGTGTCAAGGATTATTAGTGCTTAC
TAGAAATTATTAACGAAGCAATTTCGTCTACCCAGAAACTCTGTTCTACC
TTTGCAACAAAACATAATATGATCTctcaacatttcaaaataaccaAGCC
TTCTGAAAGTGTTTTGACATGATTAGAAAAATGACTGCAAAGAAGCTTTA
TGATTTTCCCATAGAGATTCCATCAATGATAATATTtgatgactcaccac
gtttagACACAACGTTCTTCAAACGTTCATAGCATCTATTATAATGACAT
TTTGTGAAGCTTGAAATGTCCTGGCGTCTACGGCTGAGGACATGTCGTTT
AGCCATAAGTAcatattaaaaactttttagcTTTGAGTATATAattgttt
ctaaaattttacgGACAGAAAAATGTATTCAAACTGATTTTCTGGCTTTT
TATGCCTAAGCTGAAAAAAGTTAAATGTGTACTTTTGGGATTTAGGCTTT
AGTTTTAAGGGTTTTTCTTTTAtaggaagaaatattttttgtcaagaaat
ttatttgaaaaagaaagaaaagatttaaaagatttttttgttgtgtaaat
aaaagtaagaaaaataaaaaatacaaatttgtttataaaaaga
Run BLAST on NCBI

transcript from alignment at sc0000161:53261..64119+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012946 ID=TCONS_00012946|Name=TCONS_00012946|organism=Clytia hemisphaerica|type=transcript|length=10859bp|location=Sequence derived from alignment at sc0000161:53261..64119+ (Clytia hemisphaerica)
NAGAAAGAGAAGAATCTTCAACCAACACTCTCCACCATAATGGAGTTCAC GATGAAGGTTAGGAATGATGGATCTTTTCATGAATTTAGTCACAAGCAAC ggttacctcgttttcaaaatattgctatgataattgattcccagaggagt tgataagaattttactttatttaacaattaacacttgaagaacgaggcag tcgttgcactcaaaataatttgtgaAAAAGCCTTGAGAGGGAAAAATATC TTTCTCTTTTGAGGTGTTACTTCTAGAATAGATCGATTACTGATTGATAT ATTTTGGCTTGGTATCTTCGTAGCACTTAATAATTTGAGATTCAGGAGAT AAGAGCTTAAAGCAAATATCTTCTTTTGAATCTGGTCGAAGTTACGAAAa gctattattatttttttaatttcagagcTGGAACAGAAGTTTGAATCTGA AAGACTATCATACCAAGAAAAGGTAATCTAATTGTGACCTTAGTATATGA CAATTTAATCACCGCGTTCAAAAGCTCATTAaatattcatccaaaaagac aAAATCGGTCCCAATCATACTAAAGTTTATACAAGCTCTGCATTCTTTCT TGCAGATCGAAAATCTCGAAAACGAAATAGCAGAACTACGGAGCAATCAA GAAACTAATGGCTCTCGTAAACAAGCTGAAAGCACAAGAAGTAAGTTTAT TGTGGTTTCTTATATTAATAGAATATCCTAGAGGTACACATAACCTGCGT TGGCTCGTTATGATACAAAATAACGTGAACCAGTCAAGTGATTCTTATCC ATCATGGCCGGACTGCCGCAATTGCACCAATCAAACTTTAAAACGTGGGG AATCTGAGTTCGTGTCTTTCAGGAAGGATTAGCGTCAAAATTTCTGTAGT CGTTACATTGGCACTGTCATAGACGAAGAAATTTTACGCGttttccttgt aaattcatcACCAGTCCCCCCCCCTCAAAAACTGACCGGGTCGTTAAGGG ATAATGCGTGTATCAGCGTCTACTATGGATCCTCTTTGTGTATATATTTT ATTCTTGTCACGGATTTGTCGATGTTTAATTTCCCTCTCAAAAAGTTACA AATGTAAATACAAAAGGTCTAATAGAGGGATACTTTAAAGACATTAGAGA CAGTTTTCTGGCGTGAATCAATCATTTAAATGACGGATATTTTTCTGCCC AATTTAAATTTGTAGTTTATATTTTTGAGTAGTATTTTTCATAAACAcac ttcttttatttttgattgaacTGCACATATCGAGAAATCGACCGATCGAA ATGCATCAATTTGCGTTTCTGTATCGACGTTTTTCTCGTTAGTTCAAAGC ACACTCTACTCACACACTTACTATCTTATACTATGCACAGCAAACCCTGT TTATTTCAAGCCTTTCAGTGAGGCCACGCTCCTTTCCCCTCTTTTACCTT CACACGCATTCAAATCTTATTTGGTATAATAAGATAACACTGAATGAAAG AACGAATGAATGAATTGATTTTGTTACCTTTTATCcgcaaaaagtcttaa aattctaaaaaaaagcaAATAGAAAACATGCCATAGTCGCTACACTTAAA CCTAAGAGCTAACAAATTTGTGATGGGTAGATATTTAGAGGaaaactttc ttctttttttcgcgACAGAATTGTCAAGTTTTATTCaaagtgaaaacttt ttaagaATGAGCTTCGCAAGATAGATCAACAAGGTTTATAAGCGTTAAAA TATTTAAAGCAAATTTCACTGCATGGAGACATGTCACGAATAGATGAAAT ATTCTATATTCCCATTATAGTTGTTGCACTAAAAGCTTTCGATCTAAATA GGGTTTGCAAAGAAAAGTCTCTCTGCTTCTTTGAAAGAAGAGGCGAGGAG TGTTTTAAACCCcaaaaaataagacttttgattTGTTTGGGACATCATTT TTTCGTGCGGAtaacaaaaacatcaaatttcattCTCGTTCATTCAATTC CATTCAACTCTGTTTTAATGTCCCAATATATCTCAGTCTTATTTTTCGTT ATTATTTAAAACACTCCTCCGTCTCTTTTCTTTCAGATGGAAGCGGTGAC GCCCGCGCGGCTGATTTTGAACGTTCGTTCGTCGATGTTTCGTCCGAGGC GGATGCTATACAGGAAGACGCTCGACATACAGGTCTCTATGTTAATAACA ACGAAAAGTGCGACGATTTTGAAGTCATTGATGATGGCTCACAAGCAGGT GGAATCAGGAACTTTGAAGATAAATCGTTTGAAAAATCTGGTCGGTCCTC TCTTTTATCATCAATGCGGACGGACTTAGTATCGGACAGTGTTGAGTCAG AACTACCCCTTGAAATCAGTGTTGACGCGTCGGCAGGCGCCATTACCAAA CCCAATAAAGACGATTACGATATCGTCCAAATCGACGAATCGGGGCGCAA ACAATCCTCAACCCGTCTAGATGTTTCTAAACTAGCTGCTAGCACGATCG ACGATCGGCAACCATCGCCGACTCCGGAGTCTAATATAAACATTAACAAG TATCTGTTTTCCGATAATGATGATGATAACGATAATGAACCTGAGACGGC TGGCACATTTAATATAGACATGTATTTCGCAAATGAGGAACATACCACAG ACCCTACCATAGACCAAGAGAATGATGATCCAGGGGATACTACGCTACCA GAAATTGTATCACCCCCTCTCCCACAACAAACAGAAATAGAGAAAAGCGA GGACTCGTCTAGCCCCTTTTTAGAAGTGAAATCACAAGCTACGGCTATGA ATGTGGTTGTCTGCAGTGAGGCTAATGATGATACAGAACTTAATCGCAAT GATGAGCCGACAGATTTCCATGCCAGTTCTCAGGACGCTGAAGATAGTAT TGCGAATAGCCAAGAAGACTTCAATGAAGCTTTTGTGTCGAACGAGGAAC ATGACTTAAGTACCGGTAACTTGGAAATCGATTCACCGGCTGTTGCCCAG CAACAACATCAGTACCTTCAAGATGATAGTACTGTTGTTGATTCTCAAAA GAACTTATTGTCGACTACCGATCCAGATATTAGGAGAAGCGTCGAGGATC TTTACGAGCGGATTTTATCGGAGGATTCATCATCGCGGAGTGGAAATGAT GTTTTTAGCGATTCTTCTGAGGGTCTACCGGCTGGAGCTACTTTTAGTGA ACCAATCGGTATTACGGGCTCACAGAGTACAGAGGAGGGGGGAGAGCGTG TTATTAGCCCCGTTGATGGTACTAAGCGCAAGGAAGGCTGGCTTGTCCGC GTGGAAAGCTTTAGCACACCGGCAACATGTACTCCACGTATCAAAGTTAT CGGCGAGAACAATGAGACCAATGAGAAAGTTGACGAAAACAATTCGACAG ATACAGTTAAAGTTCCCGAAGGTGAGGATCCGAATGAAGGTGGCGTCGAC TCGCCAGCGCCGGTCCCTAAGGAACGTAAAAAGAAGAAcaagaacaaaaa gaaaaagaaacgaaAGTCAGTTGAATTGGTAGAAGATAATGCAGCTGGTG ATACGGCCGAAGATTCGCCGTTCGAATCGCAGAAAACGGATACGGAAAGT CCAGCCGTGTCTCCAACAAAACGTGTCGATCATAGCGACATTCCGAAACA ATTTTTAGACGCTTCTACGACCCTGGGTGCGGGAGATTTGAGTTGTTCAG ACGTTTCTGATGTTGAACAAGAGACTTTAGAAGATGGAAGTACGATCGAT AAGAAACGTGGTggttctaaaaagaaaaacaaagagagCTGTAAAACTCA GTAGTTGAATAAAGCCGTATTTTTGTctgtttaaagtttgatatttttga atggAAGTTTGACTTTcctagaaagaaaaaacataacccGAAGGCCATGG GTGATTTtacttttagaaaaatcttGTCGTGTGTACTTGGTCTTTTCGGC GAAGAAAGGTCAtgtaaaatttttcaataatatcGAGACTGGTAGACTCA ACttcttcgattttttttctggaagggTCCGATATTCTCAACTTCGAATA CTTTACACGTGCAATCatgttatatatattttttggatttggttcatttt tttactgttttgttgtattcgttttttttttgtttttttttggttacTTG AGTGAtttcaaatcaagaaaattttaaaagcttcATAGACCACTCAAAAA GTACGGTCACTTGCAACAAATTATAGGTGCAAAGATAGGAAGATAGTGAA AGTCTCGCTCTGTCTGGCTTTTGTCGGAAAAGTTCAGCATTTTCGTTTGA TCCAAAGTCATATTTTTTACTAATTAAACAACAAAAATGTATAAATGATA CAAATCTATGGAATCTATCCTTGAATCTTAGTAGCTGTTGGCTAATCGGC AGATCACAAGTGTGACAGACAGGTTGAATAAGAAAACAGACATGCtaaac gttgttttaacgttctttTCGGGTgatgaaagaaagtgaaagcttttaaa atttcaaaatctaaatttataaattatacattttttttgaattatataTA AATTTATTGCAGGtatcgtttttttcttttattcttttttttttctttat tgataaTATTATTGTTGTATGTTTGTcaataaacaaacaaacgtTATCAG TATTAGAGGATGGACACAaatagttgacgctctctaattcgatcttcaag gggaactGGATTTTCAGCGAAAAAGGGAGCATATCGAATactagagcgtc gtttatgaagGTGTCTTGTTAACagtttcatcgaataagggagtgtatcg aattagagagtatcAACTGACACCCCTTCGACTAGAAATATTTGAGTTAG ATAATGTATTACATGGAGTACCATGTTTTTAAGACCGAATCTCCATCACT GAtgtcgtaaaaaagatgtcgATTTGAACCTTCCAATCACACACTAAGTA AGCATCTGAAAGATTGGACACATACAATTATTGTTGGAAAGAGCCGAAAG TTCACTCTGTGCTCAAATCAAATTCCCTCTATTAAATTCCATATTTATAT CAATCCCCAATCCATTTAAATTCACCGAATAAGTTGCTTCACCTTATAAG AGAAAAGTCTGGCTCATTATGATATTTTCCTCACGTGTCCATCCCTTGGA CCAGACTAGGGCCGTGGTTTTAGCCAGTTGACTTGTGACTTTATtcttta tacggaaacaccagAAAAAGACCGGACGtgttagttttgtttttaagtgg TAAGAAGCCGACCTTTTCCCGGTTGTTTCATTTCGTTTCCATTTAAAGGA TCCTCAATAAGGCGACTAGAACCTAGGCTTACTCATGAACATATATATTA TAAATATTATGCATAggtttaatgaaaattttaggctgaggaattatttt gttttccgTACGTAGGGGTAGTAGCAtattaaaaactattttttaacaaa aaaagttgaaaaacatTCTTGGACATGAAGCTGTTACTTCCTTTTCATTT AAAGTAGAAATACCCTGAAGGGGGGGGGGATTCACAAAGTTGTGTGTCCT AAGTAATTGTGTATAGTATGCTTATATCATTCAAagaaatttgcaaattt ttgatactttGACATTTTCACCAATCACTACTCTAGACTAAAACTCAGAT TTGAAACCTAACCTAGCCGAAACGATCTCCGACTCTTTTGTCAACCTCCG CCCTCATTCTTGTCTATCATTACTCCACTCTATTTGGCATACCGAAGCTG AATCAAAAGTATTTAAGGAAGGCTCTTTCATATTAACTTAGCTCGACCTT TCCACCAAAACTCCTTTATAACCCGTCACCTCAGTTCCACCCATAACAAA CGTTACTCCATTCCATCGTTATAGTACAAAAGTTGAAATCACAAAGTTTT CTACAAACCTAAAGCTTGCTATCACCACCCAAACCTGCCACCCTTCACCC ACACTTCGCCCTAATTCCACCCTTAACAAAACAAACGCCATTCCATTCCA CCCTAGGAGATTTACAAAAACAAGTGCAAGAGTTGAAGTCACAAGTTACA CGACTTGAACAAGATAACGCTAGACAAGAAGGACAGGTAACATAACTCAA CCATTAACATCATCTTTGAACAGACTGTAACAATGCAACGCTATTTTAAC GTCCATTTAATGTTCATTTTGTCCAtctaaaaaaatgttgaaacaatGTA GCCTACCAGTTTGGTTTGATTTCTTCATCGAGGATTCAAAATCAGTCCGA TATTTTTAAATAGAGTTATTGctataatatataaatataatttttacttT TGTCTAAAAACAACATGGCGCTATCTGGCTGTACTGATAATATATTTGTT TACAAACATCTCTTCTCTCGTCTATATTTTAGGTGGTGCGCTTGGAAACT CAAGTCAAGAGATACAAGAGTCAAGCCGACCAAGCAGTAAGTACAAACCA TATTTAAGCTTTGGATTTGAATCGACCCATCtccgggtacctaatagccg gcgggattggaataagcggaGGGATCAGAAAAagtctcaaaacttaataa gtgggggggggctggaataaaaatatcctgggtggaaaattttcgaaaaa ttaattagcggggagagacggctattaggtacccgccCGAGAGTACATGG TTCAGACAGGCAAAAACACCAGGGAATTATTCTTTCTAATAGTACAgaga aattttattctaaatttctCGAGTAACTTTAGTACCATTGAGATTTGTCA GAAATTGTCTTGAAAAGCAACTaattgttttcttctttatagGTAGCAAC TGAAGATGGCCTACTTGCTGAGAAAAGAAAGATTGGGCGTGAGGTATTAT TGAAAACTCTTTCTAGAATGAAAAGACCTTTGACTGCTAAAACACTGCAT GTGTAAAATGGccataaaaatgtaaaatttttggATTAATTTTCATGAGC CATGTAACTTGCGAATCAGCTTTTTGaaagatttcgcgtggattaaattt taCAAATCAGCCAAAAGAAAAAGGGATTTTAAACGCCACAAATAGTATGC GAGTCAGCGACCTCgcggcaaaaattcgcgaaatgcGAAATTAATTCGAT TAAAATATTTGTCAACAAAGGTACAGTGCAATCAAGTATAATACGATTGG CCGTTTACGTTtctaataagaacaaactatataggaaCAGGCTTCGATGG AAAAAATATcgagaaaaagttaagaacattctaaggctttgtggagtcta aaacacccgatttcttaggaaaatagacaaaaatactcacgatatggtga aaataagaacatgttcagaacattttaggcttaaaacttcaaaagttaag aacatccgaaggcttcaaaaattttggatgctcttataaaaaaacgtgta tcgaacaaaaatttgttcgagataaggaaatttcgagtgaTGAAGTTAAG CTTATAATGCattgttacacgctttttttaataagaatacactttataag aatgtccgtgatgaaaatggccaaaaaactaagaatatgctgagaatatc accatcatggaattttgcaaagaatgccatttttagagcatctTCAATTA TGAATtatcaattatccccaagttaggctcacgccattttatgcttcaga cgtatgtactaaatgttaaatctagtatgaattaggatcctaacctaaga atgtgttgtaagaatattttaggatgattttcccaaaaaagttaagaatg tccatgatgaaatggatttacaccattcttataaaaaaaaagtgtgtact tgaagagaccataaaacttattcgagttatagaggttcaagttaAATAGA CTCCGCtgtattttaataattttttcttttctccaCATAGTTGAGACAAT GTCAAGAACAAATCAAAGAAATGGAAACGGAGAAAGAACAATTACAGAAA AGGTTGGACAAGTTAAAAATTCGTAGAGGTATTGATACGTTATAGTTATT ACCTAGCACTAGAGCGCACTTCTCCGTCCCATTAACATGCTTCTACACGG CTCCGCTTGCCCGTTAGCTTTGCGCAATTATGTTTAATAAGAGAAATACT TATTTTTAGGTATAGTAATAAAAAATTCTAAGATACATTTTCATAataat attattatatatttttttctttttcaaatattttttcttatgtttttggc attctttttttttttgctgacgaCAACAAAAAATAGATAATTTATCACAA AATACTTCCTACGTAActttgttttatgaaaataatttttttgtaaaata tcatACATTAATGCAGTAATTTTTTGACGCATCAATATAAGAAGTAAATT TCAAGGATTTCCAGACCCTCATATTCCAAGATTTGCCTTGCATCGCGTAG AATTGAACAGTCTGTTGCGTTATGTATTAGCGTTATAGATATATACCTTT TTCAACCAAATCTCAGTTTGATTAATATCATAACTTTcataattttgaag atttttgcgtctagctaACTGATGTCGTTACTTGAGCGCAACCAGTCCTG GTTACCCATGaatcatttcgactgtgaaattGCCTGTGTGTGACGCAATT CGATTGGCACAAAATAGAACGCGCGCGAAAAGCAATGCAAAAACTTGTTT CTTGAGATGAAAAAAAGCGCGACATTCATTCTGCGCGATGGGTACCTTGA TATCTTGAAACAaagctaaaaaagggtttttgacTTTTGATGGTTTTATA CACccaaatttgtcaaaatatatCTTAATTACACTAGAATCTTTCAATTC AAGTATTCCTCTGAAATAATGCTATAATAGTAAAAGGCTCCTTCCATTTA GACTTATtagtatgattttttttaaatgaatgattgaaaattgaaaatta ataggaaatttttttttaagatataaaatatttttgccattaGTGAATTA TTTTGTTGGTAAGCAGTTATGTTTTGGTTTGATTGGAATAATTTaagatt atatattttttgttgtttttttcggtTGTTTAGATTTGGGAAGGTTAAAT TTAGAGATAATTGTCAAGATAATTAACTTTTCTTCTGAAAGGGACATTTG ACAGTTGAAAACAAGCTGTATGCAGGCTATGCAGCgtgatacaaaatcaa aacaaattttacaaaataaaaattcagaatattccgtttttattgtttta aaaagtttcGGTTGTGACTTTTATTGTTCTACTCTATGTATGACACGTTG TTCAAGAAGTGTTTACATTTTTCACTTCCCGCGCTAAGACTCCATTGACT CTTCCGGAATTTTGTGTTTACTTACGAAACTGAAATATCTCCGAAactca tttttcaactacccggagccttggtctttttccgctagaaaagttGCATT GCAGTGAAATCTTAGTGCGGGACTGGAATCTTATGGAAAACGACGGTACT ACTGTTATCCCTGTTATTTAATCCTACCGTCTAATCAATAAAATATAACC TCTTCTAAACTTACCCACAAAAACAACAATAGATTTGTGATATAATTTAT GCAGTAGTTTATATTTTACTACATTGTTTTAggtattttttgtcattttc tcaGTTTGTCACGTGATGAAAATCGTTACATGTGAATCTAGGTCCCAGGc tctttctttaaaatttgtaaacaaaagaaaagaccACTCCCTAACCCCCC AGGGCACAATTTGAGAAATCCTTTtgttaatacaccttttcgaccgtatt CACGCGGTCGGGCGTGTGCCACTTCATTaattaattatccccctaaactc gatccaatcctttttttacaactttttctaTTGCAAAAAAACTGGAACGG TTTTAAGGGGGTAaattggacaaaaaaatgcccgtgcggcaattggtggc tacagTCGAAACGGTgtattctgctttgtcagcaaaaaagaaatattgat AGAAAAGGTGAAAGGAACTGAAAGTATACATACATACAGTATTAcggtaa aattgtttcatatctttgttgaaaaattcacATACGCGATGCCTATCCAA ATTAAATTAGATTTTATTGCTCGTTTGTGGTATTTAAAGATTGATTAATT ACTCCGACGTCAAGCAATGATGAGTTTGCTTAATATCACTCGTCAAAACC TAATTAACTGGCATTGGCTAACACAAACTGCTGGGATATCGTAGTTTCTT TATTGAATTTCTCTATAATTCTTGATCGAAAGGTTTTCTTATGTGTCAAG GATTATTAGTGCTTACTAGAAATTATTAACGAAGCAATTTCGTCTACCCA GAAACTCTGTTCTACCTTTGCAACAAAACATAATATGATCTctcaacatt tcaaaataaccaAGCCTTCTGAAAGTGTTTTGACATGATTAGAAAAATGA CTGCAAAGAAGCTTTATGATTTTCCCATAGAGATTCCATCAATGATAATA TTtgatgactcaccacgtttagACACAACGTTCTTCAAACGTTCATAGCA TCTATTATAATGACATTTTGTGAAGCTTGAAATGTCCTGGCGTCTACGGC TGAGGACATGTCGTTTAGCCATAAGTAcatattaaaaactttttagcTTT GAGTATATAattgtttctaaaattttacgGACAGAAAAATGTATTCAAAC TGATTTTCTGGCTTTTTATGCCTAAGCTGAAAAAAGTTAAATGTGTACTT TTGGGATTTAGGCTTTAGTTTTAAGGGTTTTTCTTTTAtaggaagaaata ttttttgtcaagaaatttatttgaaaaagaaagaaaagatttaaaagatt tttttgttgtgtaaataaaagtaagaaaaataaaaaatacaaatttgttt ataaaaaga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007272XLOC_007272Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012946-exon-sc0000161-1491911889:53261..53317TCONS_00012946-exon-sc0000161-1491911889:53261..53317Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1510915933:53261..53317TCONS_00012946-exon-sc0000161-1510915933:53261..53317Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1575043694:53261..53317TCONS_00012946-exon-sc0000161-1575043694:53261..53317Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1491911889:53686..53732TCONS_00012946-exon-sc0000161-1491911889:53686..53732Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1510915933:53686..53732TCONS_00012946-exon-sc0000161-1510915933:53686..53732Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1575043694:53686..53732TCONS_00012946-exon-sc0000161-1575043694:53686..53732Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1491911889:53866..53950TCONS_00012946-exon-sc0000161-1491911889:53866..53950Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1510915933:53866..53950TCONS_00012946-exon-sc0000161-1510915933:53866..53950Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1575043694:53866..53950TCONS_00012946-exon-sc0000161-1575043694:53866..53950Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1491911889:59267..59346TCONS_00012946-exon-sc0000161-1491911889:59267..59346Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1510915933:59267..59346TCONS_00012946-exon-sc0000161-1510915933:59267..59346Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1575043694:59267..59346TCONS_00012946-exon-sc0000161-1575043694:59267..59346Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1491911889:59643..59696TCONS_00012946-exon-sc0000161-1491911889:59643..59696Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1510915933:59643..59696TCONS_00012946-exon-sc0000161-1510915933:59643..59696Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1575043694:59643..59696TCONS_00012946-exon-sc0000161-1575043694:59643..59696Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1491911889:60053..60103TCONS_00012946-exon-sc0000161-1491911889:60053..60103Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1510915933:60053..60103TCONS_00012946-exon-sc0000161-1510915933:60053..60103Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1575043694:60053..60103TCONS_00012946-exon-sc0000161-1575043694:60053..60103Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1491911889:61151..64119TCONS_00012946-exon-sc0000161-1491911889:61151..64119Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1510915933:61151..64119TCONS_00012946-exon-sc0000161-1510915933:61151..64119Clytia hemisphaericaexon
TCONS_00012946-exon-sc0000161-1575043694:61151..64119TCONS_00012946-exon-sc0000161-1575043694:61151..64119Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000161supercontigsc0000161:53261..64119 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 1.80366e-07 2.05992e-10 0 2.38795e-07 0 8.01258e-09 0 1.86177e-08 7.92164e-10 1.22952e-10 0 7.59446e-08 2.60463e-06 2.20532e-08 4.40791e-08 0 0 0 0 0 0.0624386 1.82608e-07 1.09375e-06 1.30191e-08
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012946 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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