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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012933 ID=TCONS_00012933|Name=TCONS_00012933|organism=Clytia hemisphaerica|type=transcript|length=1225bp
CGTCCTTACTGGGACTCATCAGCGCCGCGTACTGCACCCTACTGTTCGAT
CCTATGACCTATTTATTAGGTTTAAGTGATAGAAGCTTCCAAAAATGCAG
AATATTAACAAAAGCTTTGGTCAGAGAAGGACATATACAAAGTTTaaatg
aatgattgattaaaatttctcattttttgaaatcaaaattattttctggG
CCATATCTCTTCGACGTAACACCAAATAGTCCCGGGGGAGGGAGGGCGGT
AAATGACCGATCCTTATTGTCCGCATTATGGAGCATTCTTTTACTAATTC
AGCAttgtcatttcaaaaaaatcgtaattttttttaagagactAAATTTT
GCGAATACAGAAGAGTGTTTAGGTACAAAGATTCCTGATTTTAATGCAGC
GATTATCACAAAATATGTTGATAAAAATAAgatgaaattattatttctaC
AGAAAATTATAAATGATAAAAGATGATCAAAATGATTTAGGTTGTCGATC
GGAGGAGAGTCGTTGATAGTATGCAAGATGTGTACCGGGTATGCCAGaga
taagttaccctcttttaGGTGAAACTTCTCAATGACTTGTTTAGGACTCA
AACCATTTTCATTAGAAAGAGAAAGAATAAATTTAGACTTTGATGGGTCA
TTCATTGAGTTTGGTTCacaatatcaaaagttatgctgaaatatgaataa
aaatatcattttctgaaaatgctcaaaaCCGTCAAAAATTAATCTATTAA
ACTATTATTGCACAGAGATTGTGAATTATTACCTAATAAAGTGTTTCAAC
TgcgattaaaattaaaaatcttgaaaatatccATTAAAGGCCTCTTAAAT
GAATTAAATTTGCTTTCTACCCAATTTATCCTAAAATTGGGTCTAATTTT
TGGTTAAAGACCCTAAAAATTCGAAGGTTATGCTAATTTCCCCAACAAAG
CAATAATCATGGCATTTCTGTTTGAAGTACCATATATTTCCACTTTTTAA
GGACATTTTCTTTTGTAACCTGACATCCTTCTTTCCTTGTATTGTAATTT
TTTGACGCTTAGcttttattttaattacttaaaCAATGAAATCAATGCTA
CATGCAGTCATGTTTGTGTCAAAATATGATAGGTTGGTTTTCGAAGTTTT
TGagcaatttcataatttttgataTAGTGAACCAAAattgataaatgacc
catcaaagtTTAAGCCTGTCCTCTT Run BLAST on NCBI transcript from alignment at sc0000157:414061..415285 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012933 ID=TCONS_00012933|Name=TCONS_00012933|organism=Clytia hemisphaerica|type=transcript|length=1225bp|location=Sequence derived from alignment at sc0000157:414061..415285 (Clytia hemisphaerica)
AAGAGGACAGGCTTAAactttgatgggtcatttatcaatTTTGGTTCACT
AtatcaaaaattatgaaattgctCAAAAACTTCGAAAACCAACCTATCAT
ATTTTGACACAAACATGACTGCATGTAGCATTGATTTCATTGtttaagta
attaaaataaaagCTAAGCGTCAAAAAATTACAATACAAGGAAAGAAGGA
TGTCAGGTTACAAAAGAAAATGTCCTTAAAAAGTGGAAATATATGGTACT
TCAAACAGAAATGCCATGATTATTGCTTTGTTGGGGAAATTAGCATAACC
TTCGAATTTTTAGGGTCTTTAACCAAAAATTAGACCCAATTTTAGGATAA
ATTGGGTAGAAAGCAAATTTAATTCATTTAAGAGGCCTTTAATggatatt
ttcaagatttttaattttaatcgcAGTTGAAACACTTTATTAGGTAATAA
TTCACAATCTCTGTGCAATAATAGTTTAATAGATTAATTTTTGACGGttt
tgagcattttcagaaaatgatatttttattcatatttcagcataactttt
gatattgtGAACCAAACTCAATGAATGACCCATCAAAGTCTAAATTTATT
CTTTCTCTTTCTAATGAAAATGGTTTGAGTCCTAAACAAGTCATTGAGAA
GTTTCACCtaaaagagggtaacttatctCTGGCATACCCGGTACACATCT
TGCATACTATCAACGACTCTCCTCCGATCGACAACCTAAATCATTTTGAT
CATCTTTTATCATTTATAATTTTCTGtagaaataataatttcatcTTATT
TTTATCAACATATTTTGTGATAATCGCTGCATTAAAATCAGGAATCTTTG
TACCTAAACACTCTTCTGTATTCGCAAAATTTagtctcttaaaaaaaatt
acgatttttttgaaatgacaaTGCTGAATTAGTAAAAGAATGCTCCATAA
TGCGGACAATAAGGATCGGTCATTTACCGCCCTCCCTCCCCCGGGACTAT
TTGGTGTTACGTCGAAGAGATATGGCccagaaaataattttgatttcaaa
aaatgagaaattttaatcaatcattcatttAAACTTTGTATATGTCCTTC
TCTGACCAAAGCTTTTGTTAATATTCTGCATTTTTGGAAGCTTCTATCAC
TTAAACCTAATAAATAGGTCATAGGATCGAACAGTAGGGTGCAGTACGCG
GCGCTGATGAGTCCCAGTAAGGACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012933-exon-sc0000157-1491911889:414061..415285 | TCONS_00012933-exon-sc0000157-1491911889:414061..415285 | Clytia hemisphaerica | exon |
| TCONS_00012933-exon-sc0000157-1510915933:414061..415285 | TCONS_00012933-exon-sc0000157-1510915933:414061..415285 | Clytia hemisphaerica | exon |
| TCONS_00012933-exon-sc0000157-1575043694:414061..415285 | TCONS_00012933-exon-sc0000157-1575043694:414061..415285 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000157 | supercontig | sc0000157:414061..415285 . |
Blast
The following BLAST results are available for this feature:
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