TCONS_00012838 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012838
Unique NameTCONS_00012838
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2052

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012838 ID=TCONS_00012838|Name=TCONS_00012838|organism=Clytia hemisphaerica|type=transcript|length=2052bp
ATATATCGTACagtaaaagataaaaaacaaccGGATATGTCAGGGCAAGA
ACAAGAAACAGACAGAAATGTTGAGATTTGGAAAATTAAGAAACTTATTA
AAAGTCTTCAAGCAGCTAGAGGCAATGGCACTAGCATGATTTCCCTCATC
ATTCCACCAAAAGATCAAATTTCTCGAATCGCCAAAATGTTGGCTGATGA
ATTTGGTACAGCATCAAATATTAAAAGCAGAGTCAACAGaTTATCTGTCC
TTGGAGCTATCACATCAGTACAACAACGTCTAAAATTATATAATAAAGTA
CCTCCAAACGGTTTGGTTGTTTATTGTGGTACTATTGTGACgtcagaagg
aaaagaaaagaaagttaatATTGATTTCGAGCCTTTCAAACCAATCAATA
CATCTTTATACTTATGTGACAATAAATTTCATACAGAGGCTTTAACTGCG
CTCCTGGAGGATGACAGCAAGTTTGGATTCATTATAATGGACGGTAACGG
CGCATTATTTGGAACACTTTGCGGAAATACAAGAGATGTCTTACATAAAT
TCACTGTTGATTTACCAAAGAAGCATGGTCGTGGTGGTCAATCTGCTTTA
CGTTTTGCACGTTTACGTATGGAGAAACGTCACAATTACGTCAGAAAAGT
GGCTGAGACGGCTGTACAGATGTTCATTTCCAACGATAAAATCAATGTGG
CTGGTCTTGTTATTGCTGGTTCTGCAGATTTCAAATCAGAGTTGAGTCAG
TCTGATATGTTTGATGGTCGGTTACAagcaaaaatattgaaagttgTTGA
TGTTTCATATGGTGGTGAAAATGGTTTCAACCAGgCAATCGAATTATCAG
CCGAAGTTCTTTCAAACGTCAAGTTCATTCAAGAGAAGAAATTGATAGga
aaatattttgacgAAATCTCACAAGATACAGGTCGCTTTTGTTTCGGCGT
CGACGACACATTGAAGGCTTTGGAAATGGGAGCTGTTGAAACACTCATTG
TTTGGGAAAatcttgaaacacaacgtataACCTTGAAAAATCACAGTTCG
GACGatAATAACATTTTGCTACTGAATCCTGAACAAGAAAAAGATAGAAC
AAACTTCCTGGATAAGGAAACTAACGTTGAGTTGGAAATATTGGACAAAA
TGCCGCTCTTGGAATGGCTTGCTAATAATTACAAATCCTTCGGTGCTGCA
TTGGAAATCGTTACAGATCGTTCACAAGAAGGCTCGCAATTTTGTCGTGG
TTTCGGTGGTATTGGAGGTTTACTGCGGTACAAAGTGGACTTTCAATCGA
TGGACTACGATGATTTGGATGACCTTGACTATTACGATGATGACGATGAA
TCTCTCTTCTAAatagtgaacaaaaaatgaaagattttatcaaatcatCC
CATCATCGGTATAAATACACAGAAAGTGCAATACAGTGAAGTTTCATTAC
GAAACGCCATTGAACTGTTGATACCGAAGAGCAACTGAATGGTTCCATCC
TATGGCTGGTGGCACGAAAAACAGTTCGCTTTTAATGATTTTGACGTTAA
AGATGGGGGTGTCTCCTCTATAAGTGAAACAAACGACGACCTAATGACGT
TTCAGCAATAACTGTAGAAGACAAGAAAGAAGCCTTTGAATAGGCTCATC
AGAAACGAGGgcgatattttatttttgaaaatcgagattttattttattt
ggtttttattgTAGTTCTccattgttgttttttcttatttgttcGCCATT
CTCCAAAAAGACTTTTATCGTGAAAAGTCCAAGACAAGGTTTTTACAAAT
TCGCCGACGTAGATTCCAATGAAAACCAGAATGTTATCTCTCATTTAGCA
TGACCttaaatagtaaagtaaattttgtgttttattACTGGGCATTTGTA
TTTTTGTGTATTTATTCAGATAATTTCAGAATAACAGAATTGTGTCAATC
GTTCATATTTGTCTGACTTCCAATTTAAGAGTTGCCTAACGACTACCCAA
CGAGGGTTGTTCCAGaagcttttttttatatatattctAAAAAACATCGA
AG
Run BLAST on NCBI

transcript from alignment at sc0000156:338684..352809-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012838 ID=TCONS_00012838|Name=TCONS_00012838|organism=Clytia hemisphaerica|type=transcript|length=14126bp|location=Sequence derived from alignment at sc0000156:338684..352809- (Clytia hemisphaerica)
ATATATCGTACAGTAAAAGATAAAAAACAACCGGATATGTCAGGGCAAGA
ACAAGAAACAGACAGAAATGTTGAGATTTGGAAAATTAAGAAACTTATTA
AAAGTCTTCAAGCAGCTAGAGGGTAAGTGTTTTATAACTGAATTCTAAAA
ATGAAAAATTCCCACTTACCTTCACAGCCAAATTAATTAATAGAGTAAGT
AGAATGAAGCAAGTTCATTTATAAGCGATGGGTATATCAAGTTAATTAAT
TCCCTTACTTTTTAGCAATGGCACTAGCATGATTTCCCTCATCATTCCAC
CAAAAGATCAAATTTCTCGAATCGCCAAAATGTTGGCTGATGAATTTGGT
ACAGCATCAAATATTAAAAGCAGAGTCAACAGGTATCTTTTTAATACTAA
CTATAACAGCTTGATCTACTATGATTAGGCCTTTTTGTAAAGATATGCAA
AATTTAATGGATTTTAATCAGTTTTGCTTAAGCTAGAAGTACATATTTCT
AGGTTACTCGTACCTTTTTTATTGACAAAGGGTTTAGTTTAATATTATGT
GAAAAGACTTCTTTCTCAGATTTATGTGAAAGGGGAAGTCCATTTCAAGT
TTTATGAATGCTAAGATGACATATAGCACCTAAATCAAGCTAAATCATTT
ATCAGATGTCTGAATTATTGTTGGGAGCAGTTGCGAGTATTATTATGGCA
CATTTAAATTTTCTGATCACAACCGGGTCCTTCAAGGCAGAATTCTTAAT
AAGGATTTAACTTTATCAGCACTCAATATTAATTTGTATTTGTATTTGTG
ACTCAAAATCGAAGGCCAGATGTGGTTTGTTTGGCTGTTTTTTATTGCCT
GATAAATTTTCAACTTTTCACTAATTTGGGCTAAAGTCTGTCCCAAAAGT
ATGTGGAAACTCTACCCTTTTGACCAAATCTCAGCATGTATAAATGCGTT
ATATTGAAAGGCTATACACCATTGGAAATTTGGAAATTTATAAGAACCAC
ATCTACCAAAATTTTGTGCTGAGAAATTGTTTAAAATGTATAAAAGTGTC
CGCATAGAGACAGACTTTAGTAATACAAGGTACCGGCTGACTTTTGGATG
AAAAAAATCTTATTTTAGATTCATGTATAAATATTTATTATTGAACATAC
TTGCTTCACTGTTCCTGTTTGCTTAAAATTTGATTTTTTGTTTAGATTAT
CTGTCCTTGGAGCTATCACATCAGTACAACAACGTCTAAAATTATATAAT
AAAGGTAAAGCTCCACTTATGTATTTGAACGATAATAATGTTATAGCATT
GCTTGCAACATATTAACGCTCCTTACTTTTGAAAAATAAGAAAAATGTAT
CCCTTTTTTGACAAGCATGGTTTTTGCATTATATTGGTTAAATTTTGTTA
AATTGGTTACTGTAATTTTAATTTCGGCAACATATGAAAGCCTGAAACAC
AGTTCCCAAGTTAAAGAAAGAAAATGTCATCGTAACAAAATAATGTATTT
TTATCTGATTTTCTTTGGGGCTGCATTGGCAATATCCACTGTTTCAATGT
GTGAATATCTCTTTTGTTGTCAATTTCAGTACCTCCAAACGGTTTGGTTG
TTTATTGTGGTACTATTGTGACGTCAGAAGGAAAAGAAAAGAAAGTTAAT
ATTGATTTCGAGCCTTTCAAACCAATCAATACATCTTTATACTTATGTGA
CAATAAATTTCATACAGAGGTAAGAGCATGCATACTTCTGACTGGAACAA
CATTGCAACTACCCNAGTATTTGTATTTGTGACTCAAAATCGAAGGCCAG
ATGTGGTTTGTTTGGTTGTTTTTTATTGGCTGATAAATTTTCAACTTTTC
ACTAATTTGTGCTAAAGTCTGTCCCAAAAGTATGTGGAAACTCTACCCTT
TTGACCAAATCTCAGCATGTATAAATGCGTTATATTGAAAAGCTATACAC
CATTGGAAATTTGGAAATTTATAAAAACCACATCTACCAAAATTTTGTGC
TGAGAAATTGTTTAAAATGTAAAGTGTCCGCATAGAGACAGACTTTAGTA
ATACAAGGTACCGGCTGACTTTTGGATGAAAAAAATCTTATTTTAGATTC
ATGTATAAATATTTATTATTGAACATACTTGCTTCACTGTTCCTGTTTGC
TTAAAATTTGATTTTTTGTTTAGATTATCTGTCCTTGGAGCTATCACATC
AGTACAACAACGTCTAAAATTATATAATAAAGGTAAAGCTCCACTTATGT
ATTTGAACGATAATAATGTTATAGCATTGCTTGCAACATATTAACGCTCC
TTACTTTTGAAAAATAAGAAAAATGTATCCCTTTTTTGACAAGCATGGTT
TTTGCATTATATTGGTTAAATTTTGTTAAATTGGTTACTGTAATTTTAAT
TTCGGCAACATATGAAAGCCTGAAACACAGTTCCCAAGTTAAAGAAAGAA
AATGTCATCGTAACAAAATAATGTATTTTTATCTGATTTTCTTTGGGGCT
GCATTGGCAATATCCACTGTTTCAATGTGTGAATATCTCTTTTGTTGTCA
ATTTCAGTACCTCCAAACGGTTTGGTTGTTTATTGTGGTACTATTGTGAC
GTCAGAAGGAAAAGAAAAGAAAGTTAATATTGATTTCGAGCCTTTCAAAC
CAATCAATACATCTTTATACTTATGTGACAATAAATTTCATACAGAGGTA
AGAGCATGCATACTTCTGACTGGAACAACATTGCAACTACCCCAGAGTTG
GGGCACCTACCTGCACCTGCAGTAATAAAAATAAATAAAAAAAGCAACTC
ACTTTTTGTAAGGGTCTGAACAAACACCATGGAAATTCTTTTAAAGAGAC
CTGATCTATAATGATTCTATAAATTATTTTTAGTATACGAAAACGTCTTC
CATTTAGCTTTATGAGCAATTTTCATCTCCCTCATGCTCACTTGGTTTGT
ACAGATAGCTAGCTACATTGGTGATTTTTTTGTAGGACCTTTTACCAGAG
TCATTATCTTACAAACATAATTTTGATAAGATTCCACTGGATTTCATGAA
TCAAAACTAGTCTGCAACCAAACTTCAAAAATAACCAACCAATATCACCA
TGCTAATTGTATATTCTTCTGCTTATGGCTATTATAGGCTTTAACTGCGC
TCCTGGAGGATGACAGCAAGTTTGGATTCATTATAATGGACGGTAACGGC
GCATTATTTGGAACACTTTGCGGNGCTTGCAACATATTAACGCTCCTTAC
TTTTGAAAAATAAGAAAAATGTATCCCTTTTTTGACAAGCATGGTTTTTG
CATTATATTGGTTAAATTTTGTTAAATTGGTTACTGTAATTTTAATTTCG
GCAACATATGAAAGCCTGAAACACAGTTCCCAAGTTAAAGAAAGAAAATG
TCATCGTAACAAAATAATGTATTTTTATCTGATTTTCTTTGGGGCTGCAT
TGGCAATATCCACTGTTTCAATGTGTGAATATCTCTTTTGTTGTCAATTT
CAGTACCTCCAAACGGTTTGGTTGTTTATTGTGGTACTATTGTGACGTCA
GAAGGAAAAGAAAAGAAAGTTAATATTGATTTCGAGCCTTTCAAACCAAT
CAATACATCTTTATACTTATGTGACAATAAATTTCATACAGAGGTAAGAG
CATGCATACTTCTGACTGGAACAACATTGCAACTACCCCAGAGTTGGGGC
ACCTACCTGCACCTGCAGTAATAAAAATAAATAAAAAAAGCAACTCACTT
TTTGTAAGGGTCTGAACAAACACCATGGAAATTCTTTTAAAGAGACCTGA
TCTATAATGATTCTATAAATTATTTTTAGTATACGAAAACGTCTTCCGTT
TAGCTTTATGAGCAATTTTCATCTCCCTCATGCTCACTTGGTTTGTACAG
ATAGCTAGCTACATTGGTGATTTTATTGTAGGACCTTTTACCAGAGTCAT
TATCTTACAAACATAATTTTGATAAGATTCCACTGGATTTCATGAATCAA
AACTAGTCTGCAACCAAACTTCAAAAATAACCAACCAATATCACCATGCT
AATTGTATATTCTTCTGCTTATGGCTATTATAGGCTTTAACTGCGCTCCT
GGAGGATGACAGCAAGTTTGGATTCATTATAATGGACGGTAACGGCGCAT
TATTTGGAACACTTTGCGGAAATACAAGAGATGTCTTACATAAATTCACT
GTTGATTTACCAAAGAAGCATGGTAATTTTTTTACACATGTTATATTTCA
TCTCTTATCTACTGGTGAAAGCGAAAATATTTCTGCTGAAAGAAATGCAT
CAAAAAGTATTAAACTTTGCTTAACTTTGCTTGCTGGTTACTGGGGGCAG
ATAAGCAAAACTTCAAGTTGTAGCTCTAAAGTTTTGCAAAGACACGCTGC
ATGGAATGTAAAGTAATTTTTATGAAACACTTTTGACGTTGTCATAGCAA
CAAACAATTACTTTTAAAATCATATAATGGCTGGCACCAGTACTAAGAGC
GTACCAGTACAATTTTGACTTTCTGATATATGAAACCAATTGTTAACCAG
TCCCAAATTAATTGGATCCTGTCCTTACTTTGAAAGCTGTGCAATCTTAG
GATTTACATTTAATTGACGATAAATTTGGGGATATTATGAGAAACTTTTC
GGCACTGGTAAACAAATTATGATGGAGGGTACAGGTGGGTATTCAATTTG
ATGGATCTTACCGAAAACCTAGACCAACGTCCGAGGTTCAGAAAATGCCT
TAAAAATGGTTTTCGTAGGGCACCCCNTGCTTGCCAGACCCCATCGAACG
TGGTCTCGTATTTTTACTATATTTTTCAAGTTGAAGAAGGGCATACAAGT
TTTTAGTTTGCAAAGTTTATCAGCAACCTAAAGTGATATTGACTCCATTT
TCAATCTGTTATTTGTTAGATCAATGTCGCTGGTCTTGTTATTGCTGGTT
CTGCAGATTTCAAATCAGAGTTGAGTCAGTCTGATATGTTTGATGGTGTA
AGTGAATTAACTTATAATATCCGGTATCGAAATTTATAGACAATACTTTC
TTTTTTCAAAGCAATAACCTCCTCATCAATTCACGATATGCATCACTGCA
ATGTCTTCATCATCACACCTTAGACCCGACAGCTGATCGGTTGTAAGTGA
CGTAAAATCAGTCAATACTTCACTTTGCAACCAATCAGCTGCTGATGTAA
TGTTAGAAGACATTGCAATGGTGCATATCATGAATGCTGGAACCTAAAAG
ACTATGGCGACTATTTTAATTATTCTCACATTTTCTTTACCAGCGGTTAC
AAGCAAAAATATTGAAAGTTGTTGATGTTTCATATGGTNTATTTTCCTAG
AGGAATTTTCAGAAAAAGTCATTCTCACGGCTGGATAGCCCTGAAGTAGA
AGTATCCAAAAATGGTATTGTTTGTCAGCTTTCGTTTCTAGATATTGAAA
ATTATCGATTTTTTTTGCTGAGTCAGCAGTTTTTCAGCATATTTACCCAC
TTTAAAAATGAAATATCTCAAGAAAGTTAACAAACCATACCATTTTCGGA
TACTACTAATTCAGGGCTATCCAGCTGTGGAAATGATTTTTTCTGAAAAT
GCTCCCAGAAAAATGCTGACGTCATCGGAAAACGCCAAAAAGGTCGATTT
TTAATAAAATCTTCCTCAAAGGTCGTGGTGGTCAATCTGCTTTACGTTTT
GCACGTTTACGTATGGAGAAACGTCACAATTACGTCAGAAAAGTGGCTGA
GACGGCTGTACAGATGTTCATTTCCAACGATAAAGTAGGTGTTGTTTGTA
GCCAGTATTGTTTAAGTCAACAATTTTCTTTTCTGTAAAAGAAAGGATGA
AATTTTACAAAATACAAGCTCTCGCTTACCAGACCCCATCGAACGTGGTC
TCGTATTTTTACTATTTTTTTCAAGTTGAAGAAGGGTATACATTATATGC
AAATGATACCTGCAGTGTGATAAGTTTTTAGTTTGCAAAGTTTATCAGCA
ACCTAAAGTGATATTGACTCCATTTTCAATCTGTTATTTGTTAGATCAAT
GTGGCTGGTCTTGTTATTGCTGGTTCTGCAGATTTCAAATCAGAGTTGAG
TCAGTCTGATATGTTTGATGGTGTAAGTGAATTAACTTATAATATCCGGT
ATCGAAATTTATAGACAATACTTTCTTTTTTCAAAGCAATAACCTCCTCA
TCAATTCACGATATGCATCACTGCAATGTCTTCATCATCACACCTTAGAC
CCGACAGCTGATCGGTTGTAAGTGACGTAAAATCAGTCAATACTTCACTT
TGCAACCAATCAGCTGCTGATGTAATGTTAGAAGACATTGCAATGGTGCA
TATCATGAATGCTGGAACCTAAAAGACTATGGCGACTATTTTAATTATTC
TCACATTTTCTTTACCAGCGGTTACAAGCAAAAATATTGAAAGTTGTTGA
TGTTTCATATGGTGGTGAAAATGGTTTCAACCAGGTATCTAGCTGTTTGT
TCGAAATGCGATAGAGAGTCTTCCTTTATTTGCCAGAAGTACGACTTTCT
GAATGTGTTTTTCTAATAGCCCTAACGATAATAAAAATGTATCCTGAGCT
TCATCGAATATTTCTATTTACATTGTTTCTTTTGTTTCTTTTCAGGCAAT
CGAATTATCAGCCGAAGTTCTTTCAAACGTCAAGTTCATTCAAGAGAAGA
AATTGATAGGTATAATGAACGCTTTTTGGACCTACCTCCGGGTACCCCGG
TGGAGGTTCTATAAATTAACCCATGTCCGTCCGTCCGTCCGTCCGTCCGT
CTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTT
GCACAATGATGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATTTT
TGAGAAAAAATTTATAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTG
TCATTACTTTTTTCTGGTTTTTTGTGCAAAGATGGAGGACAAGATTCTCT
AAAGAATGGCTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCTTAAAA
AACGGATTTTCGTATTTCGGGGAAATTCCCTTTAACCAAATAAGAAAATT
TCTCAATGTTGACTCGTTATTTTTTTCTGATTTTTTGCACAATGATACAA
AATGGCAATGCCTAAAATGTGTCGGAGCCCGATTTTTGAAAAAAAATATA
TTTGGGCAAATTTGGACCAAAAACTGCCTAAAAATAGGGTTTTTTCGACT
TTGTGCAAAATCTTGTCATTACTTTTTTCTGGTTTTTTGTGCAAAGATGG
AGGACAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCTGGAAAATTC
TTATTCGCCTTAAAAGATGGATTTTCGTATTTTGGGGAAATTCCCTTTAA
CCAAATAAGAAAATTTCTCAATGTTGACTCGTTATTTTTTTCTGATTTTT
TGCACAATGATACAAAATGGCAATGCCTAAAATGTGTCGGAGCCCGATTT
TTGAAAAAAAATATATTTGGGCAAATTTGGACCAAAAACTGCCTAAAAAT
AGGGTTTTTTCGACTTTGTGCAAAATCTTGTCATTACTTTTTTCTGGTTT
TTTGTGCAAAGATGGAGGACAAGATTCTCTAAAGAATGGCTGAAGTGGTT
TTTCCTGGAAAATTCTTATTCGCCTTAAAAGATGGATTTTCGTATTTTGG
GGAAATTCCCTTTAACCAAATAAGAAAATTTCTCAATGTTGACTTGCATA
ATTTTTTTCTGATTTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAA
TGTGAAGGAGCCAGATTTTGAAGGAAAATTTTTTTGGGCAAATTTGGGCC
AAAAACAGCTTAAAAGGTTTTTTGGGCCTGAATGGTTTAAGTGATTTTCG
TATTTGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTATTCAACACACAAGCTTTATTTTTCCATTCTGAATTTTTGTA
CAATTATTGTCACTTTTTTCTTATTTTCATCTGATGTTAATCATTAGGTA
GGTCCGTTCAGCATGTTGCTTGTTTTCTTAAGGATGTACCAAGATCCTTC
AATGCGACTATAAGTACAATTTTTAAGAGCTTTGAACTGAGAAGGTTAAA
TGTTTTTTCTAAGAAATTTATCCTGGTAACAAGATACGATCCTGGACAAA
ACTGGTTGTCCACACCCTTCCCAAATATCGATTTTTTGGGGAAAGAGGGG
ACTTCTCGTTGGAAAAGGGTGATCGGACACCATTTTTGACAACAATGGTA
CTACCCTTATCAAAAGTCTTTATTAACATAACTTCGTTTTTTTTCTCCAG
GAAAATATTTTGACGAAATCTCACAAGATACAGGTCGCTTTTGTTTCGGC
GTCGACGACACATTGAAGGTATGTATTTTTCTTTCCTCGTACGTTGAGCT
CTTTTGAAAAAACGATCTGCCTTTTCGCTTCACCTGATGCTTTAAGGATG
AGAATAGAATAATTACTTATATTTATTGCATTTTTCGTTTAGACATTATT
TTCCTATAATAAATATTGAAGAATGATGTTTGTTTTTATCCCTTCAGGCT
TTGGAAATGGGAGCTGTTGAAACACTCATTGTTTGGGAAAATCTTGAAAC
ACAACGTATAACCTTGAAAAATCACAGTTCGGACGGTAAGGATTGTTTGT
TTTATCACTCGTAAATATGCTTCGTAAATGCAATGCCCTACCTTCGCCGT
AAAGATGACTGCCTGTGTGCAAGAGGCTCAAATAAAGATTAGATACCAAC
TTTCGAAAAAAAAGTTTAACCAGGACATAAAACAGATATATTTTCAAATT
AGAGTTTGTTCCCAGCACAATCTAATATTTGCTTCTTTATTACAAGGAAT
CATTGTTTGAAAATGTTGTATCACTAAAATCCAGAATTTTTACCCATAGC
TACGAAAAGAAGACTTCAATAATTATTTTAAGACAATTTCTTTTTCAAGA
CTTACGAACTTATGACTGCAAAAAAAATTTTAACGCCTGAACAGACAGGA
TTAAGCTTCACACAAGCCTGTAAATTCCTATACTGGGTGCACCAAAAAAA
GATATACAGGTTTCTCGAGATATAGTGAGCTTCAGGATTTATATTTTTTG
TTCATTCTTTTTTTATTGTATAGAGGATGCTCTAACTTGAATTTTGAGCT
ATTATACATTAAATTTGAAAAGTAGTTCGAAAGTTATTTCCAACAAACTG
ACTTTTTTTCCATGTCGAAATTTCAAAAAAATCATTAAAAACAGCAATCA
TGCTATAAATAAGTCAAAATGACAAAAACACAATTTCATTGTTTTTTTTT
ATTCTTTTTTCTCCTATCTTATATTTTGCCAGCAGTTTGCCATCTTATTT
GTCATGAACATTTCCAACACCAGCAAACTCAATGCAGAACCAAGTCCTTT
AAGCAACTACCTTAAGTGGATAAATTTTGGCGGGGATTAAATTTGGCGAA
TTTTGATAAAATTCGCCAAAGTAAATCCTCGCCTAAATTTCAAAAATCGG
CCATTCGCCAAATTAAATCCCCGCCAAATTTCACAAAATTGATCAATCGC
CAAATTAAATTCACGACAAAATTAATCCACTTAAGGTTGACTCGACTAGG
AATGGTGATCTATTTTTCAAAACTTTTCTCACATAGCATACACACATAAC
ATCAAAACCTCTCTTGGAGATTTACAAAAAAAAATTCAGCTTTGAGTATT
TGGATGGGTCACAGGCAAGAAACAACAAAAATTTATTTATTCATTGATAA
ATTTTCCCCCTACTCTATGGTAGAGCATCTTCAGATCTAACATAACTCAT
AAAAAAAACCTATCTTATAGCATCTAGCATCTTCAGACATTTGATTAAAA
AATTATTTTTATTCCCTAGATAAAAAATTAATTAAGTTATTCTTATGAAC
AATAAAATCATTAATAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATAAGAATAACTTAATTAATTTTTTATCTAGGGAATAAAAA
TAATTTTTTAATCAAATGTCTGAAGATGCTAGATGCTATAAGATAGGTTT
TTTTTTTATGAGTTATGTTAGATCTGAAGATGCTCTACCATAGAGTAGGG
GGAAAATTTATCAATGAATAAATAAATTTTTGTTGTTTCTTGCCTGTGAC
CCATCCAAATACTCAAAGTTTTAATAATGGAAAGGCAATCACTGAAGAGT
TTTATAACAAAAATTCAGCTTTTCCAAAAATATCACCCACATAGGAATAT
CTTGTTTTACCAAATTCTTATATTTCGTAACGAGTTTTGATGAACACAGT
TGTATTTTTTGGTATTTTTATCTGTAAAGAAGGTAAAGTGTCAAGAGAAA
AGTTTGCTTGCTGTTTTTGATGATTTTTTGAAATTTCAACATTAAAAAAA
AGTCAGTTTTTTGAAATAATTTTCGAATTACTTTTTCAAACCTAATGCAT
GATAGCTCAAAATTCAAGTTAGAGCATCCTCTATGCGATAAAAAAAAATG
AACAAAAAATATAAATCCTTAAGCTCACAATATCTCAATAAAGTCGTATA
CTTTTTTTTGGTGACCCGGTATACCGAGTTACTAATTGTTTTTCTTTTAT
AGATAATAACATTTTGCTACTGAATCCTGAACAAGAAAAAGATAGAACAA
ACTTCCTGGATAAGGAAGTAAGACTTTTATAATAAATCATTAGTCATAAT
CGTTTGTGAAATTTTGCGATTGTGAGTAATTTCTTTTGAGCTTTTATGCT
TCATGGTTTCAGCCCTCTCCCAAATTTTTCATCGTCATAATATTTTCATA
ATTACTTTCTTGCATAAGCTTAAAAAAGAAAAATGATTTTAAATGAATGC
TCTGACCATTGCTATATAACTTACTTCTGTAATTTAGTGTCAGTTTTAAC
AATAAAGGCCGGTCATATCAACTTAAAATTTTATTCCACCATAGACTAAC
GTTGAGTTGGAAATATTGGACAAAATGCCGCTCTTGGAATGGCTTGCTAA
TAATTACAAATCCTTCGGTAGGTTTACGAACATTCTTTCGAATCATTTCT
GCTTACAATTGCCTTAAGACAAAAGTTTTAAAACACTCATAAATTTAGGA
ACGCGTAAAAGTGTTTTAACGAGTTTGAACAAAACCCACGAAATTCGCCA
AAATTACTTTTTGCTGAAATCAGTTCCCTTAGGTATCTTTCTAAATAAAA
CAAGAGACTGATTGTGGTAATTTTCTTTGCAAAGGTGCTGCATTGGAAAT
CGTTACAGATCGTTCACAAGAAGGCTCGCAATTTTGTCGTGGTTTCGGTG
GTATTGGAGGTGAGACTTCTTCCCTCTCCGATAACTGTTATCATTAATTT
TCTAAACACTTACTGCCACTTAAACGATGACATGTGATGGTAGATATTAA
GTACCCGGGAAATTTTGTAACATGCGAAATTTAATACCATTTTAAAGGTA
CACTCTTGTTTCATAAGAACCAGTAATTTTTTAATTGCGACTTAGCTGTA
CTTATATTTTGTCACTTTGAGCCTCAATGGTGTAATCGTGCTTTTTTTGA
CGAGTTTGAGCCTGCTTCTCATAAGATTGTTCTTATAAAAAAAACCATGT
TCGATTTGAATTCAGATTTTGAAACACAATTTTGTGAGCCTGTAAACAAA
TACCAGAAGGAACATTATTTTTTTCTGAGATTTTTGAGCCAATATAATTG
TCTCCGCGACCACGGTGAGTTATATATGAATCTCTTTTATCACCAGTAGA
ATGGTATATAAACAAAAATATGTACAGGTTAAAAAGAAGAAAATTATGTT
ATGAAAGGTTCATTCTCATTTTAGGCTAGTACTCAACGAACCGTTATGTA
ACCTAGGTATTGGCATTTTATTTTTACTTTTCAATCGTCAGGTTTACTGC
GGTACAAAGTGGACTTTCAATCGATGGACTACGATGATTTGGATGACCTT
GACTATTACGATGATGACGATGAATCTCTCTTCTAAATAGTGAACAAAAA
ATGAAAGATTTTATCAAATCATCCCATCATCGGTATAAATACACAGAAAG
TGCAATACAGTGAAGTTTCATTACGAAACGCCATTGAACTGTTGATACCG
AAGAGCAACTGAATGGTTCCATCCTATGGCTGGTGGCACGAAAAACAGTT
CGCTTTTAATGATTTTGACGTTAAAGATGGGGGTGTCTCCTCTATAAGTG
AAACAAACGACGACCTAATGACGTTTCAGCAATAACTGTAGAAGACAAGA
AAGAAGCCTTTGAATAGGCTCATCAGAAACGAGGGCGATATTTTATTTTT
GAAAATCGAGATTTTATTTTATTTGGTTTTTATTGTAGTTCTCCATTGTT
GTTTTTTCTTATTTGTTCGCCATTCTCCAAAAAGACTTTTATCGTGAAAA
GTCCAAGACAAGGTTTTTACAAATTCGCCGACGTAGATTCCAATGAAAAC
CAGAATGTTATCTCTCATTTAGCATGACCTTAAATAGTAAAGTAAATTTT
GTGTTTTATTACTGGGCATTTGTATTTTTGTGTATTTATTCAGATAATTT
CAGAATAACAGAATTGTGTCAATCGTTCATATTTGTCTGACTTCCAATTT
AAGAGTTGCCTAACGACTACCCAACGAGGGTTGTTCCAGAAGCTTTTTTT
TATATATATTCTAAAAAACATCGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007198XLOC_007198Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012838-exon-sc0000156-1575043694:352688..352809TCONS_00012838-exon-sc0000156-1575043694:352688..352809Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:352428..352544TCONS_00012838-exon-sc0000156-1575043694:352428..352544Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:351556..351614TCONS_00012838-exon-sc0000156-1575043694:351556..351614Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:349167..349306TCONS_00012838-exon-sc0000156-1575043694:349167..349306Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:348588..348726TCONS_00012838-exon-sc0000156-1575043694:348588..348726Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:347026..347138TCONS_00012838-exon-sc0000156-1575043694:347026..347138Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:346688..346765TCONS_00012838-exon-sc0000156-1575043694:346688..346765Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:346326..346391TCONS_00012838-exon-sc0000156-1575043694:346326..346391Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:346101..346164TCONS_00012838-exon-sc0000156-1575043694:346101..346164Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:344292..344359TCONS_00012838-exon-sc0000156-1575043694:344292..344359Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:344025..344112TCONS_00012838-exon-sc0000156-1575043694:344025..344112Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:340693..340757TCONS_00012838-exon-sc0000156-1575043694:340693..340757Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:340343..340415TCONS_00012838-exon-sc0000156-1575043694:340343..340415Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:340051..340125TCONS_00012838-exon-sc0000156-1575043694:340051..340125Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1575043694:338684..339468TCONS_00012838-exon-sc0000156-1575043694:338684..339468Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:352688..352809TCONS_00012838-exon-sc0000156-1510915933:352688..352809Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:352428..352544TCONS_00012838-exon-sc0000156-1510915933:352428..352544Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:351556..351614TCONS_00012838-exon-sc0000156-1510915933:351556..351614Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:349167..349306TCONS_00012838-exon-sc0000156-1510915933:349167..349306Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:348588..348726TCONS_00012838-exon-sc0000156-1510915933:348588..348726Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:347026..347138TCONS_00012838-exon-sc0000156-1510915933:347026..347138Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:346688..346765TCONS_00012838-exon-sc0000156-1510915933:346688..346765Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:346326..346391TCONS_00012838-exon-sc0000156-1510915933:346326..346391Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:346101..346164TCONS_00012838-exon-sc0000156-1510915933:346101..346164Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:344292..344359TCONS_00012838-exon-sc0000156-1510915933:344292..344359Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:344025..344112TCONS_00012838-exon-sc0000156-1510915933:344025..344112Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:340693..340757TCONS_00012838-exon-sc0000156-1510915933:340693..340757Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:340343..340415TCONS_00012838-exon-sc0000156-1510915933:340343..340415Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:340051..340125TCONS_00012838-exon-sc0000156-1510915933:340051..340125Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1510915933:338684..339468TCONS_00012838-exon-sc0000156-1510915933:338684..339468Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:352688..352809TCONS_00012838-exon-sc0000156-1491911889:352688..352809Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:352428..352544TCONS_00012838-exon-sc0000156-1491911889:352428..352544Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:351556..351614TCONS_00012838-exon-sc0000156-1491911889:351556..351614Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:349167..349306TCONS_00012838-exon-sc0000156-1491911889:349167..349306Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:348588..348726TCONS_00012838-exon-sc0000156-1491911889:348588..348726Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:347026..347138TCONS_00012838-exon-sc0000156-1491911889:347026..347138Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:346688..346765TCONS_00012838-exon-sc0000156-1491911889:346688..346765Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:346326..346391TCONS_00012838-exon-sc0000156-1491911889:346326..346391Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:346101..346164TCONS_00012838-exon-sc0000156-1491911889:346101..346164Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:344292..344359TCONS_00012838-exon-sc0000156-1491911889:344292..344359Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:344025..344112TCONS_00012838-exon-sc0000156-1491911889:344025..344112Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:340693..340757TCONS_00012838-exon-sc0000156-1491911889:340693..340757Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:340343..340415TCONS_00012838-exon-sc0000156-1491911889:340343..340415Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:340051..340125TCONS_00012838-exon-sc0000156-1491911889:340051..340125Clytia hemisphaericaexon
TCONS_00012838-exon-sc0000156-1491911889:338684..339468TCONS_00012838-exon-sc0000156-1491911889:338684..339468Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156supercontigsc0000156:338684..352809 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.279	47.9457	16.4083	44.4614	87.2373	28.7438	130.784	72.4337	75.5054	82.3135	178.288	108.502	135.758	124.053	104.374	111.75	65.7672	108.432	106.754	62.3547	130.166	129.973	62.9372	59.7414	93.8512	129.364	96.917	132.173	20.6541	56.1966
Blast
[Close]
BLAST of TCONS_00012838 vs. Swiss-Prot (Human)
Match: ERF1 (Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens GN=ETF1 PE=1 SV=3)

HSP 1 Score: 741.88 bits (1914), Expect = 0.000e+0
Identity = 353/422 (83.65%), Postives = 387/422 (91.71%), Query Frame = 1 
Query:   37 MSGQEQETDRNVEIWKIKKLIKSLQAARGNGTSMISLIIPPKDQISRIAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTSEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLEDDSKFGFIIMDGNGALFGTLCGNTRDVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQMFISNDKINVAGLVIAGSADFKSELSQSDMFDGRLQAKILKVVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGKYFDEISQDTGRFCFGVDDTLKALEMGAVETLIVWENLETQRITLKNHSSDDNNILLLNPEQEKDRTNFLDKETNVELEILDKMPLLEWLANNYKSFGAALEIVTDRSQEGSQFCRGFGGIGGLLRYKVDFQSM 1302
            M+      DRNVEIWKIKKLIKSL+AARGNGTSMISLIIPPKDQISR+AKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVT EGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALL DDSKFGFI++DG+GALFGTL GNTR+VLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQ+FIS DK+NVAGLV+AGSADFK+ELSQSDMFD RLQ+K+LK+VD+SYGGENGFNQAIELS EVLSNVKFIQEKKLIG+YFDEISQDTG++CFGV+DTLKALEMGAVE LIV+ENL+  R  L    +++  IL L PEQEKD+++F DKET  E E+++ MPLLEW ANNYK FGA LEIVTD+SQEGSQF +GFGGIGG+LRY+VDFQ M
Sbjct:    1 MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGM 422
The following BLAST results are available for this feature:
BLAST of TCONS_00012838 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERF10.000e+083.65Eukaryotic peptide chain release factor subunit 1 ... [more]
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